BLASTX nr result

ID: Catharanthus22_contig00021696 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00021696
         (688 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulga...    54   7e-08

>emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1355

 Score = 53.9 bits (128), Expect(2) = 7e-08
 Identities = 41/142 (28%), Positives = 67/142 (47%), Gaps = 7/142 (4%)
 Frame = -3

Query: 458 QRKSKNFLKGLMDMNGTWSENSNDMEGIILARYNTLFKSDH*H------VDYKLLWKVEF 297
           QRK +NF+KGL D  GTW E ++ +E I  + ++++F S +        V   +   V  
Sbjct: 363 QRKKRNFVKGLFDGLGTWREEADHIENIFTSYFSSIFTSSNPSDLSLEAVMSVIEPVVTE 422

Query: 296 SDNWQRM*PLI*DDHLRYGRYVMQLNSESN*GTWTRWILCIVFWQ-YWSTVKDDVLHIVL 120
             N + + P   D+ L   + +    +    G      + ++F+Q +W  V DDV   + 
Sbjct: 423 EHNLKLLEPFSKDEILAALQQMHPCKAPGPDG------MHVIFYQRFWHIVGDDVTSFIS 476

Query: 119 GILKGHLEMSQINQTQMVLITK 54
            IL GH   S +N T + LI K
Sbjct: 477 NILHGHSSPSCVNNTNIALIPK 498



 Score = 29.3 bits (64), Expect(2) = 7e-08
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = -2

Query: 546 KEEDIWRVRSRSS*LSAGDRNTAYFITRKTKKIK 445
           K E  W +RSR + +  GD+NT YF  + +++ K
Sbjct: 333 KHEAYWYLRSRVAEVKDGDKNTKYFHHKASQRKK 366


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