BLASTX nr result
ID: Catharanthus22_contig00021567
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00021567
(623 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004244509.1| PREDICTED: mediator of RNA polymerase II tra... 182 9e-44
ref|XP_002283991.1| PREDICTED: uncharacterized protein LOC100264... 178 1e-42
gb|EOY22497.1| Uncharacterized protein isoform 1 [Theobroma cacao] 178 1e-42
ref|XP_006357075.1| PREDICTED: mediator of RNA polymerase II tra... 177 2e-42
ref|XP_004138044.1| PREDICTED: mediator of RNA polymerase II tra... 165 8e-39
ref|XP_002511168.1| conserved hypothetical protein [Ricinus comm... 163 4e-38
ref|XP_002318134.1| hypothetical protein POPTR_0012s10100g [Popu... 162 7e-38
gb|EMJ24715.1| hypothetical protein PRUPE_ppa011908mg [Prunus pe... 160 2e-37
gb|EXB25243.1| hypothetical protein L484_010110 [Morus notabilis] 160 3e-37
ref|XP_006436855.1| hypothetical protein CICLE_v10032864mg [Citr... 159 5e-37
ref|XP_002321708.2| hypothetical protein POPTR_0015s10970g [Popu... 159 6e-37
ref|XP_004291292.1| PREDICTED: mediator of RNA polymerase II tra... 154 3e-35
gb|ESW09898.1| hypothetical protein PHAVU_009G165600g [Phaseolus... 151 2e-34
ref|XP_003522437.2| PREDICTED: mediator of RNA polymerase II tra... 150 4e-34
ref|XP_003526951.1| PREDICTED: mediator of RNA polymerase II tra... 149 8e-34
gb|AFK48728.1| unknown [Medicago truncatula] 146 5e-33
ref|XP_002864848.1| hypothetical protein ARALYDRAFT_496535 [Arab... 145 7e-33
ref|NP_568973.1| uncharacterized protein [Arabidopsis thaliana] ... 145 9e-33
ref|XP_004291322.1| PREDICTED: mediator of RNA polymerase II tra... 144 2e-32
dbj|BAD43384.1| unknown protein [Arabidopsis thaliana] 144 3e-32
>ref|XP_004244509.1| PREDICTED: mediator of RNA polymerase II transcription subunit
30-like [Solanum lycopersicum]
Length = 198
Score = 182 bits (461), Expect = 9e-44
Identities = 100/187 (53%), Positives = 123/187 (65%), Gaps = 6/187 (3%)
Frame = +3
Query: 69 KSIQELAMEGQKHLEGTIEAAFQILSSMNDELCNPSLWAPPNP---NSAAVTSNHHVNN- 236
K+IQELA+EGQKHLE TIEAA QILS+MNDELCNPSLW+ N +SA + V
Sbjct: 11 KTIQELAVEGQKHLEDTIEAAHQILSAMNDELCNPSLWSTLNTAAASSAVAVAGGGVGAS 70
Query: 237 --LSGNGHHAANGDMLXXXXXXXXXXXNHFDIGGGALDEARLRYKXXXXXXXXXXXXXXN 410
LS H NGD+ H DIGGGALDE+RLRYK N
Sbjct: 71 GVLSNGQQHHTNGDISSDTSSSSSASAQHLDIGGGALDESRLRYKSSIASLRSVLTAISN 130
Query: 411 SQKAKAPEGGSMGDSVSSADHAEIEKLEEQASALRKELAIRNKYFKVLIDQLRELISDIS 590
SQKAKA E S S+S+AD AEIE+LE++AS+L+KEL +NK+ K+LIDQLR+L++D+
Sbjct: 131 SQKAKALEAASASGSLSAADQAEIEQLEDRASSLKKELVDKNKHLKLLIDQLRDLLADLC 190
Query: 591 TWQSPCA 611
TWQSPC+
Sbjct: 191 TWQSPCS 197
>ref|XP_002283991.1| PREDICTED: uncharacterized protein LOC100264705 [Vitis vinifera]
gi|147789866|emb|CAN73869.1| hypothetical protein
VITISV_001275 [Vitis vinifera]
gi|297734439|emb|CBI15686.3| unnamed protein product
[Vitis vinifera]
Length = 174
Score = 178 bits (452), Expect = 1e-42
Identities = 105/184 (57%), Positives = 126/184 (68%), Gaps = 2/184 (1%)
Frame = +3
Query: 69 KSIQELAMEGQKHLEGTIEAAFQILSSMNDELCNPSLWAPPNPNSAAVTSNHHVNNLSGN 248
K+ QELA+EGQKHLE TIE+AFQILSSMNDELCNP+LW+ P P + A +S H +L+G+
Sbjct: 7 KATQELALEGQKHLEETIESAFQILSSMNDELCNPTLWSTPPPPATAASS-HSSASLNGD 65
Query: 249 GHHAANGDMLXXXXXXXXXXXNHFDI-GGGALDEARLRYKXXXXXXXXXXXXXXNSQKAK 425
A+ D +H +I GGGALD+ARLRYK +SQKAK
Sbjct: 66 ----ASSDF-----------SHHMEIAGGGALDDARLRYKSSVASLRAVLNAIQSSQKAK 110
Query: 426 APEGGSMGD-SVSSADHAEIEKLEEQASALRKELAIRNKYFKVLIDQLRELISDISTWQS 602
A E S S S AD AEIEKLEE+AS LRKELA +NKY K+LIDQLR+LI+DISTWQS
Sbjct: 111 AFEASSAASGSASQADQAEIEKLEERASNLRKELADKNKYLKLLIDQLRDLITDISTWQS 170
Query: 603 PCAV 614
PC+V
Sbjct: 171 PCSV 174
>gb|EOY22497.1| Uncharacterized protein isoform 1 [Theobroma cacao]
Length = 198
Score = 178 bits (451), Expect = 1e-42
Identities = 106/194 (54%), Positives = 127/194 (65%), Gaps = 9/194 (4%)
Frame = +3
Query: 60 SHTKSIQELAMEGQKHLEGTIEAAFQILSSMNDELCNPSLWA--PPNPNSAAVTSNHHVN 233
S+TK+ QELA EG KHLE TIEAAFQILSSMNDELCNP+LW+ P + NS +S N
Sbjct: 14 SNTKTTQELAAEGLKHLEETIEAAFQILSSMNDELCNPALWSTIPSSSNSTTASSTTTAN 73
Query: 234 NLSGNGHHA-ANGDMLXXXXXXXXXXXNHFDIGG------GALDEARLRYKXXXXXXXXX 392
+ NG + +NGD +H ++GG GALDEARLRYK
Sbjct: 74 TAAPNGPSSLSNGDSASDGG-------HHLEMGGIGGSGNGALDEARLRYKNSVASLRAV 126
Query: 393 XXXXXNSQKAKAPEGGSMGDSVSSADHAEIEKLEEQASALRKELAIRNKYFKVLIDQLRE 572
NSQKAKA E GS S AD AEI+KLE+QAS LRKELA +N+Y K+LIDQLR+
Sbjct: 127 LAAIPNSQKAKAFETGSTASS--PADEAEIDKLEDQASNLRKELANKNEYLKLLIDQLRD 184
Query: 573 LISDISTWQSPCAV 614
LI+DISTWQSPC++
Sbjct: 185 LITDISTWQSPCSI 198
>ref|XP_006357075.1| PREDICTED: mediator of RNA polymerase II transcription subunit
30-like isoform X1 [Solanum tuberosum]
gi|565381437|ref|XP_006357076.1| PREDICTED: mediator of
RNA polymerase II transcription subunit 30-like isoform
X2 [Solanum tuberosum]
Length = 198
Score = 177 bits (450), Expect = 2e-42
Identities = 96/187 (51%), Positives = 124/187 (66%), Gaps = 6/187 (3%)
Frame = +3
Query: 69 KSIQELAMEGQKHLEGTIEAAFQILSSMNDELCNPSLWAPPNPNSAAVTSNHHVNNLSG- 245
K+IQELA+EGQKHLE TIEAA QILS+MNDELCNPSLW+ N +++ +++ +
Sbjct: 11 KTIQELAVEGQKHLEDTIEAAHQILSAMNDELCNPSLWSTLNTAASSASASAAGGGVGAS 70
Query: 246 ----NGHHA-ANGDMLXXXXXXXXXXXNHFDIGGGALDEARLRYKXXXXXXXXXXXXXXN 410
NG NGD+ H DIGGGALDE+RLRYK N
Sbjct: 71 AVLSNGQQLHTNGDISSDTSSSSSASAQHLDIGGGALDESRLRYKSSIASLRSVLTAISN 130
Query: 411 SQKAKAPEGGSMGDSVSSADHAEIEKLEEQASALRKELAIRNKYFKVLIDQLRELISDIS 590
SQKAKA E S S+S+AD AEIE+LE++AS+L+KEL +NK+ K+LIDQLR+L++D+
Sbjct: 131 SQKAKALEAASASGSLSAADQAEIEQLEDRASSLKKELVDKNKHLKLLIDQLRDLLADLC 190
Query: 591 TWQSPCA 611
TWQSPC+
Sbjct: 191 TWQSPCS 197
>ref|XP_004138044.1| PREDICTED: mediator of RNA polymerase II transcription subunit
30-like [Cucumis sativus]
gi|449532651|ref|XP_004173294.1| PREDICTED: mediator of
RNA polymerase II transcription subunit 30-like [Cucumis
sativus]
Length = 198
Score = 165 bits (418), Expect = 8e-39
Identities = 93/194 (47%), Positives = 123/194 (63%), Gaps = 7/194 (3%)
Frame = +3
Query: 54 VMSHTKSIQELAMEGQKHLEGTIEAAFQILSSMNDELCNPSLWAPPNPNSAAVTSNHHVN 233
V++ ++ QELAMEG KHLE TIE+AFQIL SMNDELCNP+LW+ + + TS +
Sbjct: 8 VLALPQTTQELAMEGIKHLEETIESAFQILYSMNDELCNPTLWSTTSSTATTATSGLTIA 67
Query: 234 NLSGNGHHAANGDMLXXXXXXXXXXXNHFDI-------GGGALDEARLRYKXXXXXXXXX 392
+ SG H+ANG + +H D GGAL+EAR+RYK
Sbjct: 68 SPSGPSSHSANG--VVNGDASSESTSHHTDSSGGGGSGSGGALEEARVRYKNSVLALRAI 125
Query: 393 XXXXXNSQKAKAPEGGSMGDSVSSADHAEIEKLEEQASALRKELAIRNKYFKVLIDQLRE 572
NSQKAKA E G+ G + S AD +EI+KLE+ S LRKEL ++N + K+LIDQLR+
Sbjct: 126 LAAIPNSQKAKAYESGTSGHA-SPADQSEIDKLEQHLSNLRKELVVKNLHIKLLIDQLRD 184
Query: 573 LISDISTWQSPCAV 614
L++D+STWQSPC+V
Sbjct: 185 LVADVSTWQSPCSV 198
>ref|XP_002511168.1| conserved hypothetical protein [Ricinus communis]
gi|223550283|gb|EEF51770.1| conserved hypothetical
protein [Ricinus communis]
Length = 196
Score = 163 bits (412), Expect = 4e-38
Identities = 99/199 (49%), Positives = 124/199 (62%), Gaps = 13/199 (6%)
Frame = +3
Query: 57 MSHTKSIQELAMEGQKHLEGTIEAAFQILSSMNDELCNPSLWAPP---NPNSAAVTSNHH 227
++ +K+ QELAMEGQKHLE TI+AA+QILSSMNDELCNP+LW+ N ++ +++ +
Sbjct: 9 ITQSKTTQELAMEGQKHLEETIQAAYQILSSMNDELCNPTLWSTTSSSNNTTSPISAPAN 68
Query: 228 VNNLSGNGHHAANGDMLXXXXXXXXXXXNHFD----------IGGGALDEARLRYKXXXX 377
N+LS NG NGD + +HFD G GALDEAR RYK
Sbjct: 69 SNSLSQNG--VVNGDSVSDAVVA-----HHFDGTGTGVVGGGTGNGALDEARFRYKNSVA 121
Query: 378 XXXXXXXXXXNSQKAKAPEGGSMGDSVSSADHAEIEKLEEQASALRKELAIRNKYFKVLI 557
NS KA + E S S AD A++EKLEEQAS LRKEL +N Y K+LI
Sbjct: 122 ALREVLAAIPNSHKAISFETSSS----SPADEADVEKLEEQASNLRKELFNKNAYLKLLI 177
Query: 558 DQLRELISDISTWQSPCAV 614
DQLR+LI+DISTWQSPC+V
Sbjct: 178 DQLRDLITDISTWQSPCSV 196
>ref|XP_002318134.1| hypothetical protein POPTR_0012s10100g [Populus trichocarpa]
gi|118486707|gb|ABK95190.1| unknown [Populus
trichocarpa] gi|222858807|gb|EEE96354.1| hypothetical
protein POPTR_0012s10100g [Populus trichocarpa]
Length = 185
Score = 162 bits (410), Expect = 7e-38
Identities = 96/184 (52%), Positives = 115/184 (62%)
Frame = +3
Query: 63 HTKSIQELAMEGQKHLEGTIEAAFQILSSMNDELCNPSLWAPPNPNSAAVTSNHHVNNLS 242
H+K+ QELA+EGQKHLE TI+AA+QILSSMNDELCNP+LW+ + +++ VTS +N
Sbjct: 15 HSKTTQELAIEGQKHLEETIQAAYQILSSMNDELCNPTLWSTTSTSTSTVTSPITSSN-- 72
Query: 243 GNGHHAANGDMLXXXXXXXXXXXNHFDIGGGALDEARLRYKXXXXXXXXXXXXXXNSQKA 422
A NGD +G GALDEAR RYK NS KA
Sbjct: 73 -----AQNGDANAAVSDSTLELNGGGGVGNGALDEARFRYKNSVAALRDVLAAIPNSHKA 127
Query: 423 KAPEGGSMGDSVSSADHAEIEKLEEQASALRKELAIRNKYFKVLIDQLRELISDISTWQS 602
K E + S AD AEIEKLEE+AS LRKELA +N Y K+LIDQLRELI+DISTWQ
Sbjct: 128 KPFE------TSSPADQAEIEKLEERASNLRKELAKKNTYVKLLIDQLRELIADISTWQG 181
Query: 603 PCAV 614
P +V
Sbjct: 182 PYSV 185
>gb|EMJ24715.1| hypothetical protein PRUPE_ppa011908mg [Prunus persica]
Length = 191
Score = 160 bits (406), Expect = 2e-37
Identities = 98/189 (51%), Positives = 116/189 (61%), Gaps = 7/189 (3%)
Frame = +3
Query: 69 KSIQELAMEGQKHLEGTIEAAFQILSSMNDELCNPSLWAPPNPNSAAVTSNHHVNNLSGN 248
K+ QELAMEGQKHLE TIEAAFQILSSMNDELCNP+LW+ + SAA N +G
Sbjct: 10 KTTQELAMEGQKHLEETIEAAFQILSSMNDELCNPTLWSTTSSFSAAT------NIANGP 63
Query: 249 GHHAANGDMLXXXXXXXXXXXNHFDI-------GGGALDEARLRYKXXXXXXXXXXXXXX 407
HA NG +H D+ GGAL+EAR RY
Sbjct: 64 APHA-NGVNNGDSSSSDNTSTHHGDLIGAGGSGTGGALEEARHRYTNSVRLLRAVLTTIP 122
Query: 408 NSQKAKAPEGGSMGDSVSSADHAEIEKLEEQASALRKELAIRNKYFKVLIDQLRELISDI 587
NSQKA + ++ S S AD AEIEKL+E+AS LRKELA +N Y K LIDQLR+LI+DI
Sbjct: 123 NSQKAPSETSSTVVSSESPADEAEIEKLDERASNLRKELANKNLYIKFLIDQLRDLITDI 182
Query: 588 STWQSPCAV 614
STWQSPC++
Sbjct: 183 STWQSPCSI 191
>gb|EXB25243.1| hypothetical protein L484_010110 [Morus notabilis]
Length = 200
Score = 160 bits (405), Expect = 3e-37
Identities = 95/189 (50%), Positives = 119/189 (62%), Gaps = 7/189 (3%)
Frame = +3
Query: 69 KSIQELAMEGQKHLEGTIEAAFQILSSMNDELCNPSLWAPPNPNSAAVTSNHHVNNLSGN 248
K+ Q+LAMEGQKHLE TIE+AFQILSSMNDELCNP+LW+ +AA +S+ + +G
Sbjct: 15 KTTQDLAMEGQKHLEDTIESAFQILSSMNDELCNPALWSTTTTVAAATSSSSPSSAANGP 74
Query: 249 GHHAANGDMLXXXXXXXXXXXNHFDIGGG------ALDEARLRYKXXXXXXXXXXXXXXN 410
H+ NG L +H D+GGG AL EA+ RYK N
Sbjct: 75 SSHS-NG--LVNGDAAASDSHHHADLGGGGGAAGGALGEAQFRYKNAVASLRAILAAIPN 131
Query: 411 SQKAKAPEGGSMG-DSVSSADHAEIEKLEEQASALRKELAIRNKYFKVLIDQLRELISDI 587
SQ+ + E G+ SV+ A EIEKLEE+AS LR ELA +N Y K+LIDQLR+LI+DI
Sbjct: 132 SQRGRTFETGTTPTSSVTPAQEVEIEKLEERASNLRTELANKNAYLKILIDQLRDLITDI 191
Query: 588 STWQSPCAV 614
STWQSPC+V
Sbjct: 192 STWQSPCSV 200
>ref|XP_006436855.1| hypothetical protein CICLE_v10032864mg [Citrus clementina]
gi|568880628|ref|XP_006493212.1| PREDICTED: mediator of
RNA polymerase II transcription subunit 30-like [Citrus
sinensis] gi|557539051|gb|ESR50095.1| hypothetical
protein CICLE_v10032864mg [Citrus clementina]
Length = 183
Score = 159 bits (403), Expect = 5e-37
Identities = 95/186 (51%), Positives = 113/186 (60%), Gaps = 3/186 (1%)
Frame = +3
Query: 66 TKSIQELAMEGQKHLEGTIEAAFQILSSMNDELCNPSLWAPPNPNSAAVTSN--HHVNNL 239
+K+ QELA EGQKHLE TIEAAFQILSSMNDELCNP+LW+ + + ++ H +
Sbjct: 14 SKTTQELAKEGQKHLEETIEAAFQILSSMNDELCNPTLWSTTTTTTTSTSNGVVHADSTS 73
Query: 240 SGNGHHAANGDMLXXXXXXXXXXXNHFDIGGGALDEARLRYKXXXXXXXXXXXXXXNSQK 419
N HH + G ALDEAR RYK NS K
Sbjct: 74 DANNHHLDSSG----------------GSGNSALDEARHRYKTSVAALRAVLTAIPNSHK 117
Query: 420 AKAPEG-GSMGDSVSSADHAEIEKLEEQASALRKELAIRNKYFKVLIDQLRELISDISTW 596
AK+ E S DSVS +D EI+KLEE+AS LRKELA +NKY K LIDQLR+LI+DISTW
Sbjct: 118 AKSFEMVSSPVDSVSRSDEVEIDKLEERASLLRKELANKNKYLKRLIDQLRDLITDISTW 177
Query: 597 QSPCAV 614
QSPC+V
Sbjct: 178 QSPCSV 183
>ref|XP_002321708.2| hypothetical protein POPTR_0015s10970g [Populus trichocarpa]
gi|550322461|gb|EEF05835.2| hypothetical protein
POPTR_0015s10970g [Populus trichocarpa]
Length = 194
Score = 159 bits (402), Expect = 6e-37
Identities = 95/186 (51%), Positives = 116/186 (62%), Gaps = 2/186 (1%)
Frame = +3
Query: 63 HTKSIQELAMEGQKHLEGTIEAAFQILSSMNDELCNPSLWAPPNPNSAAVTSNHHVNNL- 239
H+K+ QELA+EGQKHLE TI+A +QILSSMNDELCNP+LW+ + + AVTS N
Sbjct: 15 HSKTTQELAIEGQKHLEETIQAGYQILSSMNDELCNPTLWSTTSTATTAVTSPITSKNAQ 74
Query: 240 SGNGHHAANGDM-LXXXXXXXXXXXNHFDIGGGALDEARLRYKXXXXXXXXXXXXXXNSQ 416
+G NGD +G GALDEAR RYK NS
Sbjct: 75 NGAVVITVNGDANAAVSDSTHELSGGGGGVGNGALDEARFRYKNSVAALRDVLAAIPNSH 134
Query: 417 KAKAPEGGSMGDSVSSADHAEIEKLEEQASALRKELAIRNKYFKVLIDQLRELISDISTW 596
KAK E + S AD AEI+KLEE+AS+LRKELA +N Y K+LIDQLRE+I+DISTW
Sbjct: 135 KAKPFE------TSSPADEAEIKKLEERASSLRKELAKKNTYVKLLIDQLREIITDISTW 188
Query: 597 QSPCAV 614
Q+PC+V
Sbjct: 189 QTPCSV 194
>ref|XP_004291292.1| PREDICTED: mediator of RNA polymerase II transcription subunit
30-like [Fragaria vesca subsp. vesca]
Length = 180
Score = 154 bits (388), Expect = 3e-35
Identities = 93/191 (48%), Positives = 115/191 (60%), Gaps = 5/191 (2%)
Frame = +3
Query: 57 MSHTKSIQELAMEGQKHLEGTIEAAFQILSSMNDELCNPSLWAPPNPNSAAVTSNHHVNN 236
+++ K+ QELA+EGQKHLE TI++AFQILSSMNDELCNP LW P +SAA
Sbjct: 10 VTNPKTTQELAVEGQKHLEETIQSAFQILSSMNDELCNPLLW--PTDSSAA--------- 58
Query: 237 LSGNGHHAANGDMLXXXXXXXXXXXNHFDIG-----GGALDEARLRYKXXXXXXXXXXXX 401
GNGH + ++ N + G GGAL+EAR RYK
Sbjct: 59 --GNGHSSLPNGVVVHSDSSSSENTNTQNHGDSSGAGGALEEARFRYKNSVTALRAVLAA 116
Query: 402 XXNSQKAKAPEGGSMGDSVSSADHAEIEKLEEQASALRKELAIRNKYFKVLIDQLRELIS 581
+S K K+ ++ S AD E+EKLEEQAS LRKEL +N Y KVLIDQLR+LI+
Sbjct: 117 IPDSHKEKS-------ETCSPADETEVEKLEEQASNLRKELVKKNAYIKVLIDQLRDLIT 169
Query: 582 DISTWQSPCAV 614
DISTWQSPC+V
Sbjct: 170 DISTWQSPCSV 180
>gb|ESW09898.1| hypothetical protein PHAVU_009G165600g [Phaseolus vulgaris]
Length = 181
Score = 151 bits (381), Expect = 2e-34
Identities = 95/192 (49%), Positives = 113/192 (58%), Gaps = 8/192 (4%)
Frame = +3
Query: 54 VMSHTKSIQELAMEGQKHLEGTIEAAFQILSSMNDELCNPSLW--------APPNPNSAA 209
+MS +K+ QELAMEGQK+LE TIE AFQILSSMNDELCNP LW A PN SA
Sbjct: 9 MMSRSKTTQELAMEGQKYLEETIEFAFQILSSMNDELCNPVLWSTSPSATSASPNAPSAT 68
Query: 210 VTSNHHVNNLSGNGHHAANGDMLXXXXXXXXXXXNHFDIGGGALDEARLRYKXXXXXXXX 389
S +NL + + G GGAL+EARLRYK
Sbjct: 69 ADSTSDNSNLHSDSATVSAG-------------------AGGALEEARLRYKNAVAALRT 109
Query: 390 XXXXXXNSQKAKAPEGGSMGDSVSSADHAEIEKLEEQASALRKELAIRNKYFKVLIDQLR 569
NSQK+K + GS + S+AD AEI KL+E+AS+LR+ELA +N K LIDQLR
Sbjct: 110 ILTAIPNSQKSKTFDTGS---AASTADEAEIVKLQERASSLRRELANKNLLLKTLIDQLR 166
Query: 570 ELISDISTWQSP 605
LI+DISTWQSP
Sbjct: 167 GLITDISTWQSP 178
>ref|XP_003522437.2| PREDICTED: mediator of RNA polymerase II transcription subunit
30-like [Glycine max]
Length = 174
Score = 150 bits (378), Expect = 4e-34
Identities = 90/188 (47%), Positives = 112/188 (59%), Gaps = 5/188 (2%)
Frame = +3
Query: 57 MSHTKSIQELAMEGQKHLEGTIEAAFQILSSMNDELCNPSLWAP-----PNPNSAAVTSN 221
MS +K+ QELAMEGQ++LE TIE AFQILSSMNDELCNP LW+ PN ++ + SN
Sbjct: 11 MSGSKTTQELAMEGQEYLEETIENAFQILSSMNDELCNPVLWSTSPSTSPNADATSDNSN 70
Query: 222 HHVNNLSGNGHHAANGDMLXXXXXXXXXXXNHFDIGGGALDEARLRYKXXXXXXXXXXXX 401
HH + + + GGAL+EAR RYK
Sbjct: 71 HHADASAASA------------------------AAGGALEEARARYKKAVTALRTILTA 106
Query: 402 XXNSQKAKAPEGGSMGDSVSSADHAEIEKLEEQASALRKELAIRNKYFKVLIDQLRELIS 581
SQK K + GS + S AD AEI+KLEE+AS+LR+ELA +N + K LIDQLR+LI+
Sbjct: 107 IPTSQKEKTFDAGS---AASPADEAEIDKLEERASSLRRELANKNLHLKTLIDQLRDLIT 163
Query: 582 DISTWQSP 605
DISTWQSP
Sbjct: 164 DISTWQSP 171
>ref|XP_003526951.1| PREDICTED: mediator of RNA polymerase II transcription subunit
30-like isoform X1 [Glycine max]
Length = 168
Score = 149 bits (375), Expect = 8e-34
Identities = 92/187 (49%), Positives = 112/187 (59%), Gaps = 7/187 (3%)
Frame = +3
Query: 66 TKSIQELAMEGQKHLEGTIEAAFQILSSMNDELCNPSLWAP-------PNPNSAAVTSNH 224
+K+ QELAMEGQK+LE TIE AFQILSSMNDELCNP LW+ PN ++ + SNH
Sbjct: 6 SKTTQELAMEGQKYLEETIENAFQILSSMNDELCNPVLWSTSPSASSSPNADATSENSNH 65
Query: 225 HVNNLSGNGHHAANGDMLXXXXXXXXXXXNHFDIGGGALDEARLRYKXXXXXXXXXXXXX 404
H + + AA G GGGAL++AR RYK
Sbjct: 66 HADATT-----AAAG-------------------GGGALEQARSRYKKAVAALRTILTAI 101
Query: 405 XNSQKAKAPEGGSMGDSVSSADHAEIEKLEEQASALRKELAIRNKYFKVLIDQLRELISD 584
NSQKA A S + S AD AEI+KLEE+AS+LR+ELA +N + K LIDQLR+LI+D
Sbjct: 102 PNSQKANAFNASS---AASPADEAEIDKLEERASSLRRELANKNLHLKTLIDQLRDLITD 158
Query: 585 ISTWQSP 605
ISTW SP
Sbjct: 159 ISTWHSP 165
>gb|AFK48728.1| unknown [Medicago truncatula]
Length = 179
Score = 146 bits (368), Expect = 5e-33
Identities = 90/182 (49%), Positives = 107/182 (58%), Gaps = 2/182 (1%)
Frame = +3
Query: 66 TKSIQELAMEGQKHLEGTIEAAFQILSSMNDELCNPSLWA--PPNPNSAAVTSNHHVNNL 239
TK+ Q+LA+EG K+LE TI+ AF+ILSSMNDELCNP W+ P + S S++ N
Sbjct: 12 TKTTQDLAIEGHKYLEETIQHAFKILSSMNDELCNPVWWSTSPSSATSPNAPSSNGDANS 71
Query: 240 SGNGHHAANGDMLXXXXXXXXXXXNHFDIGGGALDEARLRYKXXXXXXXXXXXXXXNSQK 419
+G HA GGAL EARLRYK NSQK
Sbjct: 72 ENSGQHADGAAPSGG--------------AGGALGEARLRYKDAVAGLRSVLAAIPNSQK 117
Query: 420 AKAPEGGSMGDSVSSADHAEIEKLEEQASALRKELAIRNKYFKVLIDQLRELISDISTWQ 599
A +GGS S D AEIEKLEEQAS+LRKEL +N + K+LIDQLRELI+DISTWQ
Sbjct: 118 ANTFDGGSAD---SPMDEAEIEKLEEQASSLRKELGNKNLHLKILIDQLRELITDISTWQ 174
Query: 600 SP 605
SP
Sbjct: 175 SP 176
>ref|XP_002864848.1| hypothetical protein ARALYDRAFT_496535 [Arabidopsis lyrata subsp.
lyrata] gi|297310683|gb|EFH41107.1| hypothetical protein
ARALYDRAFT_496535 [Arabidopsis lyrata subsp. lyrata]
Length = 178
Score = 145 bits (367), Expect = 7e-33
Identities = 92/188 (48%), Positives = 110/188 (58%), Gaps = 9/188 (4%)
Frame = +3
Query: 78 QELAMEGQKHLEGTIEAAFQILSSMNDELCNPSLWA-PPNPNSAAVTSNHHVNNL----- 239
QELAMEG+KHLE TIEAAFQI+S+MNDELCNPSLW+ P+SAA + + + L
Sbjct: 4 QELAMEGEKHLEETIEAAFQIISAMNDELCNPSLWSTSATPSSAATATGSNGSALVSVDA 63
Query: 240 ---SGNGHHAANGDMLXXXXXXXXXXXNHFDIGGGALDEARLRYKXXXXXXXXXXXXXXN 410
G HH+ +G G LDEA LRYK N
Sbjct: 64 AAIDGTSHHSESG-----------GGGGGGGSGNSVLDEASLRYKNSVTSLRAVLAAIPN 112
Query: 411 SQKAKAPEGGSMGDSVSSADHAEIEKLEEQASALRKELAIRNKYFKVLIDQLRELISDIS 590
S KAKA E + S S D EIEKLEEQA +LR E+A +N + K LID+LRELI+DIS
Sbjct: 113 SHKAKASEMENGFGSPESED--EIEKLEEQALSLRMEIAKKNVHVKELIDKLRELIADIS 170
Query: 591 TWQSPCAV 614
TWQSPC+V
Sbjct: 171 TWQSPCSV 178
>ref|NP_568973.1| uncharacterized protein [Arabidopsis thaliana]
gi|75171739|sp|Q9FMV4.1|MED30_ARATH RecName:
Full=Mediator of RNA polymerase II transcription subunit
30 gi|9758289|dbj|BAB08813.1| unnamed protein product
[Arabidopsis thaliana] gi|190886513|gb|ACE95179.1|
At1g17730 [Arabidopsis thaliana]
gi|332010374|gb|AED97757.1| uncharacterized protein
AT5G63480 [Arabidopsis thaliana]
Length = 189
Score = 145 bits (366), Expect = 9e-33
Identities = 93/192 (48%), Positives = 112/192 (58%), Gaps = 9/192 (4%)
Frame = +3
Query: 66 TKSIQELAMEGQKHLEGTIEAAFQILSSMNDELCNPSLWA-PPNPNSAAVTSNHHVNNL- 239
T + QELAMEG+K LE TIEAAFQI+S+MNDELCNPSLW+ P+SAA T+ + + L
Sbjct: 11 TMTTQELAMEGEKQLEETIEAAFQIISAMNDELCNPSLWSTSATPSSAATTTGSNGSALV 70
Query: 240 -------SGNGHHAANGDMLXXXXXXXXXXXNHFDIGGGALDEARLRYKXXXXXXXXXXX 398
G HH+ + G LDEA LRYK
Sbjct: 71 SADAAAIDGTSHHSESA-----------GGGGGGGSGNSVLDEASLRYKNSVTSLRAVLA 119
Query: 399 XXXNSQKAKAPEGGSMGDSVSSADHAEIEKLEEQASALRKELAIRNKYFKVLIDQLRELI 578
NSQKAKA E + S S D EIEKLEEQA +LR E+A +N + K LID+LRELI
Sbjct: 120 AIPNSQKAKASEMQNGLGSPESED--EIEKLEEQALSLRMEIAKKNVHVKELIDKLRELI 177
Query: 579 SDISTWQSPCAV 614
+DISTWQSPC+V
Sbjct: 178 ADISTWQSPCSV 189
>ref|XP_004291322.1| PREDICTED: mediator of RNA polymerase II transcription subunit
30-like [Fragaria vesca subsp. vesca]
Length = 179
Score = 144 bits (363), Expect = 2e-32
Identities = 87/187 (46%), Positives = 109/187 (58%), Gaps = 2/187 (1%)
Frame = +3
Query: 60 SHTKSIQELAMEGQKHLEGTIEAAFQILSSMNDELCNPSLWAPPNPNSAAVTSNHHVNNL 239
++ K+ QELA++GQKHLE TI++AFQILSSMNDELCNP LW P ++ N H +
Sbjct: 11 TNPKTTQELAVQGQKHLEETIQSAFQILSSMNDELCNPLLW----PTDSSAVGNGHSSLS 66
Query: 240 SGNGHHAANGDMLXXXXXXXXXXXNHFDIGG--GALDEARLRYKXXXXXXXXXXXXXXNS 413
+G H ++ NH D G GAL+EAR RYK +S
Sbjct: 67 NGVVHSDSSSS-------ENTNTQNHGDSSGAGGALEEARFRYKNSVTALRAVLAAIPDS 119
Query: 414 QKAKAPEGGSMGDSVSSADHAEIEKLEEQASALRKELAIRNKYFKVLIDQLRELISDIST 593
K + G S AD E+EKLE +AS LRKEL +N Y KVLIDQL +LI+DIST
Sbjct: 120 HKEASETG-------SPADETEVEKLERRASNLRKELVKKNAYIKVLIDQLCDLITDIST 172
Query: 594 WQSPCAV 614
WQSPC+V
Sbjct: 173 WQSPCSV 179
>dbj|BAD43384.1| unknown protein [Arabidopsis thaliana]
Length = 184
Score = 144 bits (362), Expect = 3e-32
Identities = 93/192 (48%), Positives = 111/192 (57%), Gaps = 9/192 (4%)
Frame = +3
Query: 66 TKSIQELAMEGQKHLEGTIEAAFQILSSMNDELCNPSLWA-PPNPNSAAVTSNHHVNNL- 239
T + QELAMEG+K LE TIEAAFQI+S+MNDELCNPSLW+ P+SAA T+ + + L
Sbjct: 6 TMTTQELAMEGEKQLEETIEAAFQIISAMNDELCNPSLWSTSATPSSAATTTGSNGSALV 65
Query: 240 -------SGNGHHAANGDMLXXXXXXXXXXXNHFDIGGGALDEARLRYKXXXXXXXXXXX 398
G HH+ + G LDEA LRYK
Sbjct: 66 SADAAAIDGTSHHSESA-----------GGGGGEGSGNSVLDEASLRYKNSVTSLRAVLA 114
Query: 399 XXXNSQKAKAPEGGSMGDSVSSADHAEIEKLEEQASALRKELAIRNKYFKVLIDQLRELI 578
NSQKAKA E + S S D EIEKLEEQA +LR E+A +N + K LID LRELI
Sbjct: 115 AIPNSQKAKASEMQNGLGSPESED--EIEKLEEQALSLRMEIAKKNVHVKELIDILRELI 172
Query: 579 SDISTWQSPCAV 614
+DISTWQSPC+V
Sbjct: 173 ADISTWQSPCSV 184