BLASTX nr result
ID: Catharanthus22_contig00021546
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00021546
(388 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006833265.1| hypothetical protein AMTR_s04311p00004950, p... 89 6e-16
dbj|BAB09878.1| retroelement pol polyprotein-like [Arabidopsis t... 86 5e-15
gb|AAK84483.1| putative copia-like polyprotein [Solanum lycopers... 84 1e-14
emb|CAN80162.1| hypothetical protein VITISV_038102 [Vitis vinifera] 84 1e-14
emb|CAN83366.1| hypothetical protein VITISV_041663 [Vitis vinifera] 84 1e-14
emb|CAN59907.1| hypothetical protein VITISV_033147 [Vitis vinifera] 84 1e-14
gb|AAD28681.1| putative retroelement pol polyprotein [Arabidopsi... 84 2e-14
gb|AAF78498.1|AC012187_18 Contains similarity to a putative prot... 83 3e-14
gb|AAF79281.1|AC068602_4 F14D16.7 [Arabidopsis thaliana] 83 3e-14
emb|CAN80895.1| hypothetical protein VITISV_031817 [Vitis vinifera] 83 3e-14
emb|CAN79264.1| hypothetical protein VITISV_034881 [Vitis vinifera] 83 3e-14
emb|CAN77974.1| hypothetical protein VITISV_006175 [Vitis vinifera] 83 3e-14
emb|CAB86917.1| putative protein [Arabidopsis thaliana] 83 3e-14
emb|CAB62478.1| putative protein [Arabidopsis thaliana] 83 3e-14
emb|CAA18243.1| retrotransposon like protein (fragment) [Arabido... 83 4e-14
emb|CAN71646.1| hypothetical protein VITISV_015502 [Vitis vinifera] 82 7e-14
emb|CAN63034.1| hypothetical protein VITISV_044052 [Vitis vinifera] 82 1e-13
emb|CAN71782.1| hypothetical protein VITISV_028677 [Vitis vinifera] 81 1e-13
emb|CAN76956.1| hypothetical protein VITISV_022305 [Vitis vinifera] 81 1e-13
emb|CAN68598.1| hypothetical protein VITISV_003488 [Vitis vinifera] 80 2e-13
>ref|XP_006833265.1| hypothetical protein AMTR_s04311p00004950, partial [Amborella
trichopoda] gi|548837929|gb|ERM98543.1| hypothetical
protein AMTR_s04311p00004950, partial [Amborella
trichopoda]
Length = 288
Score = 89.0 bits (219), Expect = 6e-16
Identities = 47/89 (52%), Positives = 56/89 (62%)
Frame = +3
Query: 27 IKRRYIKGDRTNHISLKFFFTHKLQRNGH*NFSLLSSKKWYN*CATNSISDNLIDLFTKV 206
+K YIKGDRT HIS KFFFTH LQ NG + + S SDNL DLFTK
Sbjct: 212 LKGGYIKGDRTKHISPKFFFTHNLQENGDIDVQQIRS------------SDNLADLFTKS 259
Query: 207 LPTATFKKLIHKIGMHCLRDLKRFSQQGE 293
LPT+TF+K++HKIGM L+DL +GE
Sbjct: 260 LPTSTFEKMVHKIGMRRLKDLHECQNEGE 288
>dbj|BAB09878.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 158
Score = 85.9 bits (211), Expect = 5e-15
Identities = 43/89 (48%), Positives = 61/89 (68%)
Frame = +3
Query: 27 IKRRYIKGDRTNHISLKFFFTHKLQRNGH*NFSLLSSKKWYN*CATNSISDNLIDLFTKV 206
+K YIKGDRT HI KFF+TH LQ++G + +L + ++DNL DLFTK
Sbjct: 55 LKDGYIKGDRTKHILPKFFYTHDLQKSG--DVRVLQIR----------LNDNLADLFTKA 102
Query: 207 LPTATFKKLIHKIGMHCLRDLKRFSQQGE 293
LPTATFKKL+++IG+ CL++L ++ +GE
Sbjct: 103 LPTATFKKLVYRIGLRCLKNLDEYTHKGE 131
>gb|AAK84483.1| putative copia-like polyprotein [Solanum lycopersicum]
Length = 779
Score = 84.3 bits (207), Expect = 1e-14
Identities = 46/82 (56%), Positives = 53/82 (64%)
Frame = +3
Query: 27 IKRRYIKGDRTNHISLKFFFTHKLQRNGH*NFSLLSSKKWYN*CATNSISDNLIDLFTKV 206
+K YIKGDRT HIS KFFFTH LQ+NG + S SDNL DLFTK
Sbjct: 710 LKGGYIKGDRTKHISPKFFFTHDLQQNGEIEVQQIRS------------SDNLADLFTKA 757
Query: 207 LPTATFKKLIHKIGMHCLRDLK 272
LPT+TF+KL +KIGM LRD+K
Sbjct: 758 LPTSTFEKLRYKIGMRRLRDIK 779
>emb|CAN80162.1| hypothetical protein VITISV_038102 [Vitis vinifera]
Length = 701
Score = 84.3 bits (207), Expect = 1e-14
Identities = 44/77 (57%), Positives = 53/77 (68%)
Frame = +3
Query: 39 YIKGDRTNHISLKFFFTHKLQRNGH*NFSLLSSKKWYN*CATNSISDNLIDLFTKVLPTA 218
YIKGDRT HIS KFF+TH+LQ++G + + S SDNL DLFTK LPT+
Sbjct: 626 YIKGDRTKHISPKFFYTHELQKSGEIDVQQIRS------------SDNLADLFTKSLPTS 673
Query: 219 TFKKLIHKIGMHCLRDL 269
TFKKLIHKIGM L+D+
Sbjct: 674 TFKKLIHKIGMRQLKDI 690
>emb|CAN83366.1| hypothetical protein VITISV_041663 [Vitis vinifera]
Length = 407
Score = 84.3 bits (207), Expect = 1e-14
Identities = 44/77 (57%), Positives = 53/77 (68%)
Frame = +3
Query: 39 YIKGDRTNHISLKFFFTHKLQRNGH*NFSLLSSKKWYN*CATNSISDNLIDLFTKVLPTA 218
YIKGDRT HIS KFF+TH+LQ++G + + S SDNL DLFTK LPT+
Sbjct: 332 YIKGDRTKHISPKFFYTHELQKSGEIDVQQIRS------------SDNLADLFTKSLPTS 379
Query: 219 TFKKLIHKIGMHCLRDL 269
TFKKLIHKIGM L+D+
Sbjct: 380 TFKKLIHKIGMRQLKDI 396
>emb|CAN59907.1| hypothetical protein VITISV_033147 [Vitis vinifera]
Length = 853
Score = 84.3 bits (207), Expect = 1e-14
Identities = 44/77 (57%), Positives = 53/77 (68%)
Frame = +3
Query: 39 YIKGDRTNHISLKFFFTHKLQRNGH*NFSLLSSKKWYN*CATNSISDNLIDLFTKVLPTA 218
YIKGDRT HISLKFF+TH+LQ++G + + S SDNL DLFTK LPT+
Sbjct: 778 YIKGDRTKHISLKFFYTHELQKSGKIDVQQICS------------SDNLADLFTKSLPTS 825
Query: 219 TFKKLIHKIGMHCLRDL 269
TFKKLIH IGM L+D+
Sbjct: 826 TFKKLIHMIGMRQLKDI 842
>gb|AAD28681.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 88
Score = 84.0 bits (206), Expect = 2e-14
Identities = 44/89 (49%), Positives = 57/89 (64%)
Frame = +3
Query: 27 IKRRYIKGDRTNHISLKFFFTHKLQRNGH*NFSLLSSKKWYN*CATNSISDNLIDLFTKV 206
+K YIKGDRT HI KFFFTH LQ++G + S +DNL DLFTK
Sbjct: 12 LKDGYIKGDRTKHILPKFFFTHDLQKSGDVRVLQIRS------------NDNLSDLFTKA 59
Query: 207 LPTATFKKLIHKIGMHCLRDLKRFSQQGE 293
LPTATFKKL+++IG+ L+DL ++ +GE
Sbjct: 60 LPTATFKKLVYRIGLRRLKDLDEYTHKGE 88
>gb|AAF78498.1|AC012187_18 Contains similarity to a putative protein T22K7_70 gi|7529773 from
Arabidopsis thaliana BAC T22K7 gb|AL138641 [Arabidopsis
thaliana]
Length = 112
Score = 83.2 bits (204), Expect = 3e-14
Identities = 43/89 (48%), Positives = 57/89 (64%)
Frame = +3
Query: 27 IKRRYIKGDRTNHISLKFFFTHKLQRNGH*NFSLLSSKKWYN*CATNSISDNLIDLFTKV 206
+K YIKGDRT HI KFF+TH LQ++G + S +DNL DLFTK
Sbjct: 36 LKDGYIKGDRTKHILPKFFYTHDLQKSGDVRVLQIRS------------NDNLADLFTKA 83
Query: 207 LPTATFKKLIHKIGMHCLRDLKRFSQQGE 293
LPTATFKKL+++IG+ L+DL ++ +GE
Sbjct: 84 LPTATFKKLVYRIGLRRLKDLDEYTHKGE 112
>gb|AAF79281.1|AC068602_4 F14D16.7 [Arabidopsis thaliana]
Length = 163
Score = 83.2 bits (204), Expect = 3e-14
Identities = 43/89 (48%), Positives = 57/89 (64%)
Frame = +3
Query: 27 IKRRYIKGDRTNHISLKFFFTHKLQRNGH*NFSLLSSKKWYN*CATNSISDNLIDLFTKV 206
+K YIKGDRT HI KFF+TH LQ++G + S +DNL DLFTK
Sbjct: 60 LKDGYIKGDRTKHILPKFFYTHDLQKSGDVRVLQIRS------------NDNLADLFTKA 107
Query: 207 LPTATFKKLIHKIGMHCLRDLKRFSQQGE 293
LPTATFKKL+++IG+ L+DL ++ +GE
Sbjct: 108 LPTATFKKLVYRIGLRRLKDLDEYTHKGE 136
>emb|CAN80895.1| hypothetical protein VITISV_031817 [Vitis vinifera]
Length = 324
Score = 83.2 bits (204), Expect = 3e-14
Identities = 43/77 (55%), Positives = 53/77 (68%)
Frame = +3
Query: 39 YIKGDRTNHISLKFFFTHKLQRNGH*NFSLLSSKKWYN*CATNSISDNLIDLFTKVLPTA 218
YIKGDRT HIS KFF+TH+LQ++G + + S SDNL DLFTK LPT+
Sbjct: 176 YIKGDRTKHISPKFFYTHELQKSGEIDVQQIRS------------SDNLADLFTKSLPTS 223
Query: 219 TFKKLIHKIGMHCLRDL 269
TFKKLIH+IGM L+D+
Sbjct: 224 TFKKLIHRIGMRQLKDI 240
>emb|CAN79264.1| hypothetical protein VITISV_034881 [Vitis vinifera]
Length = 1360
Score = 83.2 bits (204), Expect = 3e-14
Identities = 43/77 (55%), Positives = 53/77 (68%)
Frame = +3
Query: 39 YIKGDRTNHISLKFFFTHKLQRNGH*NFSLLSSKKWYN*CATNSISDNLIDLFTKVLPTA 218
YIKGDRT HIS KFF+TH+LQ++G + + S SDNL DLFTK LPT+
Sbjct: 1285 YIKGDRTKHISPKFFYTHELQKSGEIDVQQIRS------------SDNLADLFTKSLPTS 1332
Query: 219 TFKKLIHKIGMHCLRDL 269
TFKKLIH+IGM L+D+
Sbjct: 1333 TFKKLIHRIGMRQLKDI 1349
>emb|CAN77974.1| hypothetical protein VITISV_006175 [Vitis vinifera]
Length = 1501
Score = 83.2 bits (204), Expect = 3e-14
Identities = 43/77 (55%), Positives = 53/77 (68%)
Frame = +3
Query: 39 YIKGDRTNHISLKFFFTHKLQRNGH*NFSLLSSKKWYN*CATNSISDNLIDLFTKVLPTA 218
YIKGDRT HIS KFF+TH+LQ++G + + S SDNL DLFTK LPT+
Sbjct: 1426 YIKGDRTKHISPKFFYTHELQKSGEIDVQQIRS------------SDNLADLFTKSLPTS 1473
Query: 219 TFKKLIHKIGMHCLRDL 269
TFKKLIH+IGM L+D+
Sbjct: 1474 TFKKLIHRIGMRQLKDI 1490
>emb|CAB86917.1| putative protein [Arabidopsis thaliana]
Length = 88
Score = 83.2 bits (204), Expect = 3e-14
Identities = 43/89 (48%), Positives = 57/89 (64%)
Frame = +3
Query: 27 IKRRYIKGDRTNHISLKFFFTHKLQRNGH*NFSLLSSKKWYN*CATNSISDNLIDLFTKV 206
+K YIKGDRT HI KFF+TH LQ++G + S +DNL DLFTK
Sbjct: 12 LKDGYIKGDRTKHILPKFFYTHDLQKSGDVRVLQIRS------------NDNLADLFTKA 59
Query: 207 LPTATFKKLIHKIGMHCLRDLKRFSQQGE 293
LPTATFKKL+++IG+ L+DL ++ +GE
Sbjct: 60 LPTATFKKLVYRIGLRRLKDLDEYTHKGE 88
>emb|CAB62478.1| putative protein [Arabidopsis thaliana]
Length = 158
Score = 83.2 bits (204), Expect = 3e-14
Identities = 43/89 (48%), Positives = 57/89 (64%)
Frame = +3
Query: 27 IKRRYIKGDRTNHISLKFFFTHKLQRNGH*NFSLLSSKKWYN*CATNSISDNLIDLFTKV 206
+K YIKGDRT HI KFF+TH LQ++G + S +DNL DLFTK
Sbjct: 55 LKDGYIKGDRTKHILPKFFYTHDLQKSGDVRVLQIRS------------NDNLADLFTKA 102
Query: 207 LPTATFKKLIHKIGMHCLRDLKRFSQQGE 293
LPTATFKKL+++IG+ L+DL ++ +GE
Sbjct: 103 LPTATFKKLVYRIGLRRLKDLDEYTHKGE 131
>emb|CAA18243.1| retrotransposon like protein (fragment) [Arabidopsis thaliana]
gi|7268813|emb|CAB79018.1| retrotransposon like protein
(fragment) [Arabidopsis thaliana]
Length = 161
Score = 82.8 bits (203), Expect = 4e-14
Identities = 43/89 (48%), Positives = 57/89 (64%)
Frame = +3
Query: 27 IKRRYIKGDRTNHISLKFFFTHKLQRNGH*NFSLLSSKKWYN*CATNSISDNLIDLFTKV 206
+K YIKGDRT HI KFF+TH LQ++G + S +DNL DLFTK
Sbjct: 85 LKDGYIKGDRTKHILPKFFYTHDLQKSGDVRVLQIRS------------NDNLADLFTKA 132
Query: 207 LPTATFKKLIHKIGMHCLRDLKRFSQQGE 293
LPTATFKKL+++IG+ L+DL ++ +GE
Sbjct: 133 LPTATFKKLVYRIGLRRLKDLVEYTHKGE 161
>emb|CAN71646.1| hypothetical protein VITISV_015502 [Vitis vinifera]
Length = 369
Score = 82.0 bits (201), Expect = 7e-14
Identities = 43/77 (55%), Positives = 52/77 (67%)
Frame = +3
Query: 39 YIKGDRTNHISLKFFFTHKLQRNGH*NFSLLSSKKWYN*CATNSISDNLIDLFTKVLPTA 218
YIKGDRT HIS KFF+TH+LQ++G + S SDNL DLFTK LPT+
Sbjct: 294 YIKGDRTKHISPKFFYTHELQKSGEIAVQQIRS------------SDNLADLFTKSLPTS 341
Query: 219 TFKKLIHKIGMHCLRDL 269
TFKKLIH+IGM L+D+
Sbjct: 342 TFKKLIHRIGMRQLKDI 358
>emb|CAN63034.1| hypothetical protein VITISV_044052 [Vitis vinifera]
Length = 820
Score = 81.6 bits (200), Expect = 1e-13
Identities = 42/81 (51%), Positives = 55/81 (67%)
Frame = +3
Query: 27 IKRRYIKGDRTNHISLKFFFTHKLQRNGH*NFSLLSSKKWYN*CATNSISDNLIDLFTKV 206
I R YIKGD+T HIS KFF+TH+LQ++ + + S SDNL+DLFTK+
Sbjct: 743 ITRGYIKGDKTKHISPKFFYTHELQKSNEIDVQQIHS------------SDNLVDLFTKL 790
Query: 207 LPTATFKKLIHKIGMHCLRDL 269
L T+TFKKLIH+IGM L+D+
Sbjct: 791 LSTSTFKKLIHRIGMRQLKDI 811
>emb|CAN71782.1| hypothetical protein VITISV_028677 [Vitis vinifera]
Length = 1383
Score = 81.3 bits (199), Expect = 1e-13
Identities = 43/77 (55%), Positives = 52/77 (67%)
Frame = +3
Query: 39 YIKGDRTNHISLKFFFTHKLQRNGH*NFSLLSSKKWYN*CATNSISDNLIDLFTKVLPTA 218
YIKGDRT HIS KFF TH+LQ++G + + S SDNL DLFTK LPT+
Sbjct: 1308 YIKGDRTKHISPKFFCTHELQKSGEIDVQQIRS------------SDNLADLFTKSLPTS 1355
Query: 219 TFKKLIHKIGMHCLRDL 269
TFKKLIH+IGM L+D+
Sbjct: 1356 TFKKLIHRIGMRQLKDI 1372
>emb|CAN76956.1| hypothetical protein VITISV_022305 [Vitis vinifera]
Length = 973
Score = 81.3 bits (199), Expect = 1e-13
Identities = 42/77 (54%), Positives = 52/77 (67%)
Frame = +3
Query: 39 YIKGDRTNHISLKFFFTHKLQRNGH*NFSLLSSKKWYN*CATNSISDNLIDLFTKVLPTA 218
YIKGDRT HIS KFF+TH+LQ++G + + S SDN+ LFTK LPT+
Sbjct: 898 YIKGDRTKHISPKFFYTHELQKSGEIDVQQIRS------------SDNJAXLFTKSLPTS 945
Query: 219 TFKKLIHKIGMHCLRDL 269
TFKKLIHKIGM L+D+
Sbjct: 946 TFKKLIHKIGMRQLKDI 962
>emb|CAN68598.1| hypothetical protein VITISV_003488 [Vitis vinifera]
Length = 1146
Score = 80.5 bits (197), Expect = 2e-13
Identities = 43/76 (56%), Positives = 50/76 (65%)
Frame = +3
Query: 39 YIKGDRTNHISLKFFFTHKLQRNGH*NFSLLSSKKWYN*CATNSISDNLIDLFTKVLPTA 218
YIKGDRT HIS KFF+TH+LQ++G + + S SDNL DLFTK LPT+
Sbjct: 1054 YIKGDRTKHISPKFFYTHELQKSGEIDVQQIRS------------SDNLADLFTKSLPTS 1101
Query: 219 TFKKLIHKIGMHCLRD 266
TFKKLIH IGM L D
Sbjct: 1102 TFKKLIHMIGMRQLND 1117