BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00021239
         (463 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004241058.1| PREDICTED: RNA-binding motif protein, Y chro...    44   1e-07
ref|XP_006356681.1| PREDICTED: RNA-binding motif protein, Y chro...    40   6e-06
ref|XP_006356682.1| PREDICTED: RNA-binding motif protein, Y chro...    40   6e-06

>ref|XP_004241058.1| PREDICTED: RNA-binding motif protein, Y chromosome, family 1 member
           B-like [Solanum lycopersicum]
          Length = 168

 Score = 43.5 bits (101), Expect(2) = 1e-07
 Identities = 34/113 (30%), Positives = 48/113 (42%), Gaps = 13/113 (11%)
 Frame = +3

Query: 21  MALFCSICKFPIICPQSKRKFAIQRLLS-------SIPVIQ------TANCPKVSHFNXX 161
           MALFCS+C   +I P      +  R +S       S+P+        T    K SHF   
Sbjct: 1   MALFCSLCNNSLISPSPSFTSSAVRHVSAFKPQFLSLPIFSFKQSYLTDLSQKKSHFPKC 60

Query: 162 XXXXXXXXXXXXXXXXXXXXATSTAVIFVKGLAQSVSEGTLKAAFSKIGDISK 320
                                 ST +IF+KGLA+S  EG LK  FS+ G++++
Sbjct: 61  SDSSVVQQNDDDD---------STTIIFLKGLAKSTPEGRLKVVFSQFGNVNR 104



 Score = 37.7 bits (86), Expect(2) = 1e-07
 Identities = 16/24 (66%), Positives = 20/24 (83%)
 Frame = +1

Query: 385 NGNAVKIILDKKTRKSLGFACIWF 456
           N N VKI+ DKK+++SLGFA IWF
Sbjct: 101 NVNRVKIVTDKKSKESLGFAYIWF 124


>ref|XP_006356681.1| PREDICTED: RNA-binding motif protein, Y chromosome, family 1 member
           B-like isoform X1 [Solanum tuberosum]
          Length = 168

 Score = 40.4 bits (93), Expect(2) = 6e-06
 Identities = 17/30 (56%), Positives = 23/30 (76%)
 Frame = +3

Query: 231 TAVIFVKGLAQSVSEGTLKAAFSKIGDISK 320
           T +IF+KGLA+S  EG LK  FS+ GD+S+
Sbjct: 75  TTIIFLKGLAKSTPEGRLKVVFSQFGDVSR 104



 Score = 35.0 bits (79), Expect(2) = 6e-06
 Identities = 15/20 (75%), Positives = 18/20 (90%)
 Frame = +1

Query: 397 VKIILDKKTRKSLGFACIWF 456
           VKII DKK+++SLGFA IWF
Sbjct: 105 VKIITDKKSKESLGFAYIWF 124


>ref|XP_006356682.1| PREDICTED: RNA-binding motif protein, Y chromosome, family 1 member
           B-like isoform X2 [Solanum tuberosum]
          Length = 156

 Score = 40.4 bits (93), Expect(2) = 6e-06
 Identities = 17/30 (56%), Positives = 23/30 (76%)
 Frame = +3

Query: 231 TAVIFVKGLAQSVSEGTLKAAFSKIGDISK 320
           T +IF+KGLA+S  EG LK  FS+ GD+S+
Sbjct: 75  TTIIFLKGLAKSTPEGRLKVVFSQFGDVSR 104



 Score = 35.0 bits (79), Expect(2) = 6e-06
 Identities = 15/20 (75%), Positives = 18/20 (90%)
 Frame = +1

Query: 397 VKIILDKKTRKSLGFACIWF 456
           VKII DKK+++SLGFA IWF
Sbjct: 105 VKIITDKKSKESLGFAYIWF 124