BLASTX nr result
ID: Catharanthus22_contig00021192
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00021192
(499 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002525676.1| transcription initiation factor brf1, putati... 87 2e-15
gb|EOY10448.1| Cyclin/Brf1-like TBP-binding protein, putative is... 85 1e-14
ref|XP_006479195.1| PREDICTED: transcription factor IIIB 90 kDa ... 83 3e-14
ref|XP_006443522.1| hypothetical protein CICLE_v10019321mg [Citr... 83 3e-14
ref|XP_006443520.1| hypothetical protein CICLE_v10019321mg [Citr... 83 3e-14
emb|CBI31214.3| unnamed protein product [Vitis vinifera] 82 7e-14
ref|XP_006826322.1| hypothetical protein AMTR_s00004p00092300 [A... 82 1e-13
ref|XP_004157302.1| PREDICTED: transcription factor IIIB 60 kDa ... 79 6e-13
ref|XP_006369550.1| hypothetical protein POPTR_0001s25330g [Popu... 75 7e-12
ref|XP_006354652.1| PREDICTED: transcription factor IIIB 90 kDa ... 75 9e-12
ref|XP_004229719.1| PREDICTED: transcription factor IIIB 90 kDa ... 74 2e-11
ref|XP_004135795.1| PREDICTED: transcription factor IIIB 60 kDa ... 74 3e-11
ref|XP_006443519.1| hypothetical protein CICLE_v10019321mg [Citr... 72 8e-11
ref|XP_006348566.1| PREDICTED: transcription factor IIIB 90 kDa ... 71 2e-10
ref|NP_187547.2| Cyclin/Brf1-like TBP-binding protein [Arabidops... 70 3e-10
gb|AAF14044.1|AC011436_28 putative transcription factor [Arabido... 70 3e-10
gb|EMJ28902.1| hypothetical protein PRUPE_ppa005778mg [Prunus pe... 68 1e-09
ref|XP_006297259.1| hypothetical protein CARUB_v10013272mg [Caps... 65 9e-09
ref|XP_004296706.1| PREDICTED: transcription factor IIIB 90 kDa ... 65 9e-09
ref|XP_002314140.2| hypothetical protein POPTR_0009s04400g [Popu... 63 4e-08
>ref|XP_002525676.1| transcription initiation factor brf1, putative [Ricinus communis]
gi|223534976|gb|EEF36659.1| transcription initiation
factor brf1, putative [Ricinus communis]
Length = 625
Score = 87.4 bits (215), Expect = 2e-15
Identities = 49/113 (43%), Positives = 69/113 (61%)
Frame = -2
Query: 405 KSREKRRQKRAMESENSGRAPTAAEATHQMLTRKGLSSKINYEALEKLFDESPFPSMKKS 226
KS+++++QKRA E++NS A +A+EA QMLT+K LSSKINY+ LEKLFDE KK
Sbjct: 497 KSKKEKQQKRAAEAKNSVPAQSASEAARQMLTKKRLSSKINYDVLEKLFDEPGSKDPKKL 556
Query: 225 RTESREGHGEAGKEGSKGENEAETGNYYEQQENNDRYKEDNSCKHFYADELYN 67
RTES E + ++ GN E++E+ + YK +N DE Y+
Sbjct: 557 RTESESDTDEKFPQTDDRNDDLGPGNKNEKEEDAEAYKYNNDQYDENVDEAYD 609
>gb|EOY10448.1| Cyclin/Brf1-like TBP-binding protein, putative isoform 1 [Theobroma
cacao]
Length = 605
Score = 84.7 bits (208), Expect = 1e-14
Identities = 52/120 (43%), Positives = 74/120 (61%), Gaps = 3/120 (2%)
Frame = -2
Query: 405 KSREKRRQKRAMESENSGRAPTAAEATHQMLTRKGLSSKINYEALEKLFDESPFPSMKKS 226
KSR++R+QKRA E++NSG TAAEAT +ML RK LSSKINY+ALEKLFDE P S +K
Sbjct: 483 KSRKERQQKRAAEAKNSGPPQTAAEATRRMLARKRLSSKINYDALEKLFDE-PVASSEKP 541
Query: 225 RTESREGHGE--AGKEGSKGENEAETGNYYEQQE-NNDRYKEDNSCKHFYADELYNQNSE 55
+ + E H + K G+ E + + Y E + K DN+ + +E+Y+ + +
Sbjct: 542 KKQKNESHSDEKEDKVSKIGKEEGDLADEYNDVEGDGGGTKFDNNLD--FENEVYDYDDD 599
>ref|XP_006479195.1| PREDICTED: transcription factor IIIB 90 kDa subunit-like isoform X2
[Citrus sinensis]
Length = 618
Score = 83.2 bits (204), Expect = 3e-14
Identities = 50/118 (42%), Positives = 73/118 (61%), Gaps = 5/118 (4%)
Frame = -2
Query: 405 KSREKRRQKRAMESENSGRAPTAAEATHQMLTRKGLSSKINYEALEKLFDES-PFPSMKK 229
KSR++++QKRA E++NSG A TA EAT +MLT+K LSSKINY+ LEKLFD+S + KK
Sbjct: 493 KSRKEKQQKRAAEAKNSGPAQTALEATRRMLTKKRLSSKINYDVLEKLFDDSVTSENPKK 552
Query: 228 SRTESREGHGEAGKEGSKGENEAE----TGNYYEQQENNDRYKEDNSCKHFYADELYN 67
RT+S + + K E+E+E G++ + + Y +N + DE Y+
Sbjct: 553 KRTDSHSDYDDKFPNNGKKEHESEDLGPEGDFDANGDVGEAY--ENELDYGNVDEAYD 608
>ref|XP_006443522.1| hypothetical protein CICLE_v10019321mg [Citrus clementina]
gi|568851023|ref|XP_006479194.1| PREDICTED:
transcription factor IIIB 90 kDa subunit-like isoform X1
[Citrus sinensis] gi|557545784|gb|ESR56762.1|
hypothetical protein CICLE_v10019321mg [Citrus
clementina]
Length = 620
Score = 83.2 bits (204), Expect = 3e-14
Identities = 50/118 (42%), Positives = 73/118 (61%), Gaps = 5/118 (4%)
Frame = -2
Query: 405 KSREKRRQKRAMESENSGRAPTAAEATHQMLTRKGLSSKINYEALEKLFDES-PFPSMKK 229
KSR++++QKRA E++NSG A TA EAT +MLT+K LSSKINY+ LEKLFD+S + KK
Sbjct: 495 KSRKEKQQKRAAEAKNSGPAQTALEATRRMLTKKRLSSKINYDVLEKLFDDSVTSENPKK 554
Query: 228 SRTESREGHGEAGKEGSKGENEAE----TGNYYEQQENNDRYKEDNSCKHFYADELYN 67
RT+S + + K E+E+E G++ + + Y +N + DE Y+
Sbjct: 555 KRTDSHSDYDDKFPNNGKKEHESEDLGPEGDFDANGDVGEAY--ENELDYGNVDEAYD 610
>ref|XP_006443520.1| hypothetical protein CICLE_v10019321mg [Citrus clementina]
gi|567902066|ref|XP_006443521.1| hypothetical protein
CICLE_v10019321mg [Citrus clementina]
gi|557545782|gb|ESR56760.1| hypothetical protein
CICLE_v10019321mg [Citrus clementina]
gi|557545783|gb|ESR56761.1| hypothetical protein
CICLE_v10019321mg [Citrus clementina]
Length = 543
Score = 83.2 bits (204), Expect = 3e-14
Identities = 50/118 (42%), Positives = 73/118 (61%), Gaps = 5/118 (4%)
Frame = -2
Query: 405 KSREKRRQKRAMESENSGRAPTAAEATHQMLTRKGLSSKINYEALEKLFDES-PFPSMKK 229
KSR++++QKRA E++NSG A TA EAT +MLT+K LSSKINY+ LEKLFD+S + KK
Sbjct: 418 KSRKEKQQKRAAEAKNSGPAQTALEATRRMLTKKRLSSKINYDVLEKLFDDSVTSENPKK 477
Query: 228 SRTESREGHGEAGKEGSKGENEAE----TGNYYEQQENNDRYKEDNSCKHFYADELYN 67
RT+S + + K E+E+E G++ + + Y +N + DE Y+
Sbjct: 478 KRTDSHSDYDDKFPNNGKKEHESEDLGPEGDFDANGDVGEAY--ENELDYGNVDEAYD 533
>emb|CBI31214.3| unnamed protein product [Vitis vinifera]
Length = 622
Score = 82.0 bits (201), Expect = 7e-14
Identities = 54/124 (43%), Positives = 71/124 (57%), Gaps = 12/124 (9%)
Frame = -2
Query: 405 KSREKRRQKRAMESENSGRAPTAAEATHQMLTRKGLSSKINYEALEKLFDES-PFPSMKK 229
KSR++R+QKRA E++N+ A TAAEAT QMLT+K LSSKINY+ LEKLFD+S P + KK
Sbjct: 498 KSRKERQQKRAAEAKNTVPAQTAAEATRQMLTKKRLSSKINYDVLEKLFDDSVPSENPKK 557
Query: 228 SRTESREGHGEAGKEGSKGENEAETGNYYEQQE-----------NNDRYKEDNSCKHFYA 82
RTES+ + + S + E E + + E ND Y E Y
Sbjct: 558 IRTESQTENNDHKAPISNKKLEPEEDDLAPEDEFGYEGDTGGLYGNDLYGEGYDYDDDYG 617
Query: 81 DELY 70
D+ Y
Sbjct: 618 DDGY 621
>ref|XP_006826322.1| hypothetical protein AMTR_s00004p00092300 [Amborella trichopoda]
gi|548830636|gb|ERM93559.1| hypothetical protein
AMTR_s00004p00092300 [Amborella trichopoda]
Length = 737
Score = 81.6 bits (200), Expect = 1e-13
Identities = 53/140 (37%), Positives = 75/140 (53%), Gaps = 22/140 (15%)
Frame = -2
Query: 405 KSREKRRQKRAMESENSGRAPTAAEATHQMLTRKGLSSKINYEALEKLFDE--------- 253
K ++ ++QKRA E+ N+ A TAAEAT QMLT+K +SSKINYE L KLFDE
Sbjct: 559 KMKKDKQQKRAEEARNATPAQTAAEATRQMLTKKKISSKINYEVLNKLFDEETPAKDEGK 618
Query: 252 ------SPFPSMKKSRTESREGHGEAGKEGSKGENE-------AETGNYYEQQENNDRYK 112
PS K+ RT+S HG++ + +K EN+ N YE+Q + Y
Sbjct: 619 TQDGDAEEVPSSKRQRTKS--SHGDSRAQKTKDENDRGFDTEALNDDNGYEEQHAGEDYG 676
Query: 111 EDNSCKHFYADELYNQNSEE 52
+N+ + A+E Y + E
Sbjct: 677 YENAQGYGNAEEGYGYGNAE 696
>ref|XP_004157302.1| PREDICTED: transcription factor IIIB 60 kDa subunit-like [Cucumis
sativus]
Length = 663
Score = 79.0 bits (193), Expect = 6e-13
Identities = 53/120 (44%), Positives = 68/120 (56%), Gaps = 2/120 (1%)
Frame = -2
Query: 405 KSREKRRQKRAMESENSGRAPTAAEATHQMLTRKGLSSKINYEALEKLFDESP--FPSMK 232
KSR++R++KRA E++N+ A TAAEAT QML +K LSSKINY+ L+KLFDES PS K
Sbjct: 541 KSRKERQRKRAAEAKNATPAQTAAEATRQMLNKKRLSSKINYDVLDKLFDESAGMEPSAK 600
Query: 231 KSRTESREGHGEAGKEGSKGENEAETGNYYEQQENNDRYKEDNSCKHFYADELYNQNSEE 52
K E E E K N + E+QE + D+ Y LY +N EE
Sbjct: 601 KKCEEQAE-------ETEKTRNTTKEFETTEEQEED----YDDGYDGTYGSGLYYENMEE 649
>ref|XP_006369550.1| hypothetical protein POPTR_0001s25330g [Populus trichocarpa]
gi|550348149|gb|ERP66119.1| hypothetical protein
POPTR_0001s25330g [Populus trichocarpa]
Length = 508
Score = 75.5 bits (184), Expect = 7e-12
Identities = 46/118 (38%), Positives = 67/118 (56%)
Frame = -2
Query: 405 KSREKRRQKRAMESENSGRAPTAAEATHQMLTRKGLSSKINYEALEKLFDESPFPSMKKS 226
KS+++ +QKRA E+ NS A +AAEA H+MLT+K +SSKINY+ LEKLF+E K+
Sbjct: 384 KSKKEMQQKRAAEARNSVPAKSAAEAVHRMLTKKRISSKINYDVLEKLFEEPEAKDAKRP 443
Query: 225 RTESREGHGEAGKEGSKGENEAETGNYYEQQENNDRYKEDNSCKHFYADELYNQNSEE 52
RTES E +++ E N + D D++ Y D LY++N +
Sbjct: 444 RTESHPDPVEKVLHTDGKDHKLEDTNENDGLGPLDE-NVDDAVGEAYDDFLYDENGSD 500
>ref|XP_006354652.1| PREDICTED: transcription factor IIIB 90 kDa subunit-like [Solanum
tuberosum]
Length = 615
Score = 75.1 bits (183), Expect = 9e-12
Identities = 45/100 (45%), Positives = 65/100 (65%)
Frame = -2
Query: 405 KSREKRRQKRAMESENSGRAPTAAEATHQMLTRKGLSSKINYEALEKLFDESPFPSMKKS 226
KS+++++QKRA E +N+G A TAAEAT QML +K LS+KINY+ LEKLFD+S + KK+
Sbjct: 503 KSKKEKQQKRAAELKNTGPAQTAAEATKQMLAKKRLSNKINYDVLEKLFDDSLPENPKKA 562
Query: 225 RTESREGHGEAGKEGSKGENEAETGNYYEQQENNDRYKED 106
RT + + + G + K + E + NY + Y ED
Sbjct: 563 RT-AYDSTDDYGVKSDKIDPEVDE-NYEHTFGEDVHYGED 600
>ref|XP_004229719.1| PREDICTED: transcription factor IIIB 90 kDa subunit-like [Solanum
lycopersicum]
Length = 615
Score = 74.3 bits (181), Expect = 2e-11
Identities = 39/71 (54%), Positives = 55/71 (77%), Gaps = 2/71 (2%)
Frame = -2
Query: 405 KSREKRRQKRAMESENSGRAPTAAEATHQMLTRKGLSSKINYEALEKLFDESPFPSMKKS 226
KS+++++QKRA E +N+G A TAAEAT QML +K LS+KINY+ LEKLFD+S + KK+
Sbjct: 503 KSKKEKQQKRAAELKNTGPAQTAAEATKQMLAKKRLSNKINYDVLEKLFDDSAPENPKKA 562
Query: 225 RT--ESREGHG 199
RT +S + +G
Sbjct: 563 RTAYDSTDDYG 573
>ref|XP_004135795.1| PREDICTED: transcription factor IIIB 60 kDa subunit-like [Cucumis
sativus]
Length = 643
Score = 73.6 bits (179), Expect = 3e-11
Identities = 46/96 (47%), Positives = 59/96 (61%), Gaps = 2/96 (2%)
Frame = -2
Query: 405 KSREKRRQKRAMESENSGRAPTAAEATHQMLTRKGLSSKINYEALEKLFDESP--FPSMK 232
KSR++R++KRA E++N+ A TAAEAT QML +K LSSKINY+ L+KLFDES PS K
Sbjct: 541 KSRKERQRKRAAEAKNATPAQTAAEATRQMLNKKRLSSKINYDVLDKLFDESAGMEPSAK 600
Query: 231 KSRTESREGHGEAGKEGSKGENEAETGNYYEQQENN 124
K E E E K N + E+QE +
Sbjct: 601 KKCEEQAE-------ETEKTRNTTKEFETTEEQEED 629
>ref|XP_006443519.1| hypothetical protein CICLE_v10019321mg [Citrus clementina]
gi|557545781|gb|ESR56759.1| hypothetical protein
CICLE_v10019321mg [Citrus clementina]
Length = 567
Score = 72.0 bits (175), Expect = 8e-11
Identities = 35/52 (67%), Positives = 45/52 (86%)
Frame = -2
Query: 405 KSREKRRQKRAMESENSGRAPTAAEATHQMLTRKGLSSKINYEALEKLFDES 250
KSR++++QKRA E++NSG A TA EAT +MLT+K LSSKINY+ LEKLFD+S
Sbjct: 495 KSRKEKQQKRAAEAKNSGPAQTALEATRRMLTKKRLSSKINYDVLEKLFDDS 546
>ref|XP_006348566.1| PREDICTED: transcription factor IIIB 90 kDa subunit-like [Solanum
tuberosum]
Length = 622
Score = 70.9 bits (172), Expect = 2e-10
Identities = 45/101 (44%), Positives = 60/101 (59%), Gaps = 1/101 (0%)
Frame = -2
Query: 405 KSREKRRQKRAMESENSGRAPTAAEATHQMLTRKGLSSKINYEALEKLFDESP-FPSMKK 229
+SR+++RQKRA E +NSG A T EAT QMLTRK L +KINY+ LEKLFD+S + KK
Sbjct: 507 ESRKEKRQKRAAELKNSGPAKTPFEATKQMLTRKRLCTKINYDLLEKLFDDSEILQNPKK 566
Query: 228 SRTESREGHGEAGKEGSKGENEAETGNYYEQQENNDRYKED 106
SR + + E+E + + E+ RY ED
Sbjct: 567 SRNVDDSTNHNESRNFFLEEDEIYEEPFVQYDEDM-RYDED 606
>ref|NP_187547.2| Cyclin/Brf1-like TBP-binding protein [Arabidopsis thaliana]
gi|110741698|dbj|BAE98795.1| putative transcription
factor [Arabidopsis thaliana]
gi|332641235|gb|AEE74756.1| Cyclin/Brf1-like TBP-binding
protein [Arabidopsis thaliana]
Length = 604
Score = 70.1 bits (170), Expect = 3e-10
Identities = 43/101 (42%), Positives = 60/101 (59%), Gaps = 1/101 (0%)
Frame = -2
Query: 405 KSREKRRQKRAMESENSGRAPTAAEATHQMLTRKGLSSKINYEALEKLFDES-PFPSMKK 229
KSR++++QK+A E++N+ TA EA + L +K LSS INY+ LE LFD S P S K+
Sbjct: 473 KSRKEKQQKKAEEAKNAAPPATAVEAVRRTLDKKRLSSVINYDVLESLFDTSAPEKSPKR 532
Query: 228 SRTESREGHGEAGKEGSKGENEAETGNYYEQQENNDRYKED 106
S+TE+ E K EN+ N +E EN D +ED
Sbjct: 533 SKTET-------DIEKKKEENKEMKSNEHENGENEDEDEED 566
>gb|AAF14044.1|AC011436_28 putative transcription factor [Arabidopsis thaliana]
Length = 600
Score = 70.1 bits (170), Expect = 3e-10
Identities = 43/101 (42%), Positives = 60/101 (59%), Gaps = 1/101 (0%)
Frame = -2
Query: 405 KSREKRRQKRAMESENSGRAPTAAEATHQMLTRKGLSSKINYEALEKLFDES-PFPSMKK 229
KSR++++QK+A E++N+ TA EA + L +K LSS INY+ LE LFD S P S K+
Sbjct: 469 KSRKEKQQKKAEEAKNAAPPATAVEAVRRTLDKKRLSSVINYDVLESLFDTSAPEKSPKR 528
Query: 228 SRTESREGHGEAGKEGSKGENEAETGNYYEQQENNDRYKED 106
S+TE+ E K EN+ N +E EN D +ED
Sbjct: 529 SKTET-------DIEKKKEENKEMKSNEHENGENEDEDEED 562
>gb|EMJ28902.1| hypothetical protein PRUPE_ppa005778mg [Prunus persica]
Length = 444
Score = 68.2 bits (165), Expect = 1e-09
Identities = 42/115 (36%), Positives = 58/115 (50%), Gaps = 20/115 (17%)
Frame = -2
Query: 405 KSREKRRQKRAMESENSGRAPTAAEATHQMLTRKGLSSKINYEALEKLFDESPFPSMKKS 226
K R++R+ RA E+ N A TAAEA HQMLT+K LSSKIN++ALE +F + P K
Sbjct: 323 KKRKERQLARAAEARNDTEAQTAAEAVHQMLTKKRLSSKINFDALEDMFQTAEAPDNSKK 382
Query: 225 RTES--------------------REGHGEAGKEGSKGENEAETGNYYEQQENND 121
+ ES + + + G EG+ G N + N EQ + D
Sbjct: 383 KKESHPDIDGVMQHEEGLEFDAYKNDENEDDGNEGTVGYNILDPENVDEQYDYED 437
>ref|XP_006297259.1| hypothetical protein CARUB_v10013272mg [Capsella rubella]
gi|482565968|gb|EOA30157.1| hypothetical protein
CARUB_v10013272mg [Capsella rubella]
Length = 600
Score = 65.1 bits (157), Expect = 9e-09
Identities = 47/125 (37%), Positives = 70/125 (56%), Gaps = 7/125 (5%)
Frame = -2
Query: 405 KSREKRRQKRAMESENSGRAPTAAEATHQMLTRKGLSSKINYEALEKLFDESPFPSM-KK 229
+SR++++QK+A E +N+ TA EA + L +K L++ INY+ LE+LFD S ++ KK
Sbjct: 473 QSRKEKQQKKAEEEKNAAPPATAMEAVRRTLVKKRLTTVINYDVLEELFDTSAGENLPKK 532
Query: 228 SRTESREGHGEAGKEGSKGE---NEAETG-NYYEQQENNDRYKE--DNSCKHFYADELYN 67
S+T EAG E K E NE E G N E +E + Y E D + ++LY
Sbjct: 533 SKT-------EAGMEKEKKEEKSNEPEIGENEDEAEEGEEGYVESYDMNTNFQNGEKLYE 585
Query: 66 QNSEE 52
+ EE
Sbjct: 586 EEEEE 590
>ref|XP_004296706.1| PREDICTED: transcription factor IIIB 90 kDa subunit-like [Fragaria
vesca subsp. vesca]
Length = 620
Score = 65.1 bits (157), Expect = 9e-09
Identities = 43/111 (38%), Positives = 64/111 (57%), Gaps = 1/111 (0%)
Frame = -2
Query: 405 KSREKRRQKRAMESENSGRAPTAAEATHQMLTRKGLSSKINYEALEKLFDESPFPSMKKS 226
K +++R+ RA E++NS A TAAEA HQMLT+K LSSKIN++ LE +F+ S P + K
Sbjct: 494 KRKKERQLARAAEAKNSTPAQTAAEAVHQMLTKKRLSSKINFDVLEDMFETSEGPDVSKK 553
Query: 225 RTESREGHGEAGKEGSKGENEAETGNYYEQQENNDRYKEDN-SCKHFYADE 76
R K S +N+ + + E+ + D YK+D+ + Y DE
Sbjct: 554 R-----------KIDSHLDNDNKMPHDSEELK-YDAYKDDDLGMEQEYGDE 592
>ref|XP_002314140.2| hypothetical protein POPTR_0009s04400g [Populus trichocarpa]
gi|550331015|gb|EEE88095.2| hypothetical protein
POPTR_0009s04400g [Populus trichocarpa]
Length = 562
Score = 63.2 bits (152), Expect = 4e-08
Identities = 30/52 (57%), Positives = 41/52 (78%)
Frame = -2
Query: 405 KSREKRRQKRAMESENSGRAPTAAEATHQMLTRKGLSSKINYEALEKLFDES 250
KS+++ +QKRA E+ N A +AAEA H+MLT+K L SKINY+ LEKLF++S
Sbjct: 455 KSKKETQQKRASEARNLAPAKSAAEAVHRMLTKKRLGSKINYDVLEKLFEDS 506