BLASTX nr result
ID: Catharanthus22_contig00021159
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00021159
(219 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOY24678.1| Nucleic acid-binding, putative isoform 3 [Theobro... 75 1e-11
gb|EOY24677.1| Nucleic acid-binding, putative isoform 2 [Theobro... 75 1e-11
gb|EOY24676.1| Nucleic acid-binding, OB-fold-like protein, putat... 75 1e-11
ref|XP_004300773.1| PREDICTED: uncharacterized protein LOC101304... 73 4e-11
ref|XP_004143986.1| PREDICTED: uncharacterized protein LOC101217... 72 8e-11
ref|XP_006352282.1| PREDICTED: uncharacterized protein LOC102596... 72 1e-10
gb|EMJ12096.1| hypothetical protein PRUPE_ppa001627mg [Prunus pe... 70 3e-10
gb|EMJ12095.1| hypothetical protein PRUPE_ppa001627mg [Prunus pe... 70 3e-10
ref|XP_006477448.1| PREDICTED: uncharacterized protein LOC102625... 70 4e-10
ref|XP_006477447.1| PREDICTED: uncharacterized protein LOC102625... 70 4e-10
ref|XP_006440592.1| hypothetical protein CICLE_v10024399mg [Citr... 70 4e-10
ref|XP_004503759.1| PREDICTED: bromodomain testis-specific prote... 69 5e-10
ref|XP_006306831.1| hypothetical protein CARUB_v10008376mg [Caps... 69 8e-10
ref|XP_004244605.1| PREDICTED: uncharacterized protein LOC101250... 67 2e-09
ref|XP_006385758.1| hypothetical protein POPTR_0003s12430g [Popu... 66 4e-09
ref|XP_002304482.2| S1 RNA-binding domain-containing family prot... 66 4e-09
gb|EXB37387.1| 30S ribosomal protein S1 [Morus notabilis] 65 9e-09
emb|CBI34709.3| unnamed protein product [Vitis vinifera] 64 3e-08
gb|ESW32036.1| hypothetical protein PHAVU_002G287600g [Phaseolus... 63 4e-08
ref|XP_002892714.1| S1 RNA-binding domain-containing protein [Ar... 63 4e-08
>gb|EOY24678.1| Nucleic acid-binding, putative isoform 3 [Theobroma cacao]
Length = 592
Score = 74.7 bits (182), Expect = 1e-11
Identities = 38/70 (54%), Positives = 51/70 (72%)
Frame = +3
Query: 3 VPNVILRKPSLFDDDESETSSRFNISPNLALKMAKERQKETFSDMTLLRKPELTNTNPIL 182
VPNVILRKP+L ++D+ E RF I PNL+LKM E+ K+ FS+MTLLRKPE + + L
Sbjct: 170 VPNVILRKPTLINEDDVENLPRFRIKPNLSLKMRNEKAKDHFSEMTLLRKPEPMSVDTSL 229
Query: 183 DRENGISDGS 212
D++ S+GS
Sbjct: 230 DKKQD-SEGS 238
>gb|EOY24677.1| Nucleic acid-binding, putative isoform 2 [Theobroma cacao]
Length = 588
Score = 74.7 bits (182), Expect = 1e-11
Identities = 38/70 (54%), Positives = 51/70 (72%)
Frame = +3
Query: 3 VPNVILRKPSLFDDDESETSSRFNISPNLALKMAKERQKETFSDMTLLRKPELTNTNPIL 182
VPNVILRKP+L ++D+ E RF I PNL+LKM E+ K+ FS+MTLLRKPE + + L
Sbjct: 170 VPNVILRKPTLINEDDVENLPRFRIKPNLSLKMRNEKAKDHFSEMTLLRKPEPMSVDTSL 229
Query: 183 DRENGISDGS 212
D++ S+GS
Sbjct: 230 DKKQD-SEGS 238
>gb|EOY24676.1| Nucleic acid-binding, OB-fold-like protein, putative isoform 1
[Theobroma cacao]
Length = 747
Score = 74.7 bits (182), Expect = 1e-11
Identities = 38/70 (54%), Positives = 51/70 (72%)
Frame = +3
Query: 3 VPNVILRKPSLFDDDESETSSRFNISPNLALKMAKERQKETFSDMTLLRKPELTNTNPIL 182
VPNVILRKP+L ++D+ E RF I PNL+LKM E+ K+ FS+MTLLRKPE + + L
Sbjct: 170 VPNVILRKPTLINEDDVENLPRFRIKPNLSLKMRNEKAKDHFSEMTLLRKPEPMSVDTSL 229
Query: 183 DRENGISDGS 212
D++ S+GS
Sbjct: 230 DKKQD-SEGS 238
>ref|XP_004300773.1| PREDICTED: uncharacterized protein LOC101304100 [Fragaria vesca
subsp. vesca]
Length = 889
Score = 72.8 bits (177), Expect = 4e-11
Identities = 38/53 (71%), Positives = 42/53 (79%), Gaps = 1/53 (1%)
Frame = +3
Query: 3 VPNVILRKPSLF-DDDESETSSRFNISPNLALKMAKERQKETFSDMTLLRKPE 158
VPNVILRKPSLF +DD +T SR I PNL+LKM E+ KE FSDMTLLRKPE
Sbjct: 257 VPNVILRKPSLFSEDDVEDTRSRLRIKPNLSLKMRIEQPKEKFSDMTLLRKPE 309
>ref|XP_004143986.1| PREDICTED: uncharacterized protein LOC101217667 [Cucumis sativus]
gi|449495887|ref|XP_004159975.1| PREDICTED:
uncharacterized protein LOC101229904 [Cucumis sativus]
Length = 766
Score = 72.0 bits (175), Expect = 8e-11
Identities = 36/70 (51%), Positives = 48/70 (68%), Gaps = 1/70 (1%)
Frame = +3
Query: 3 VPNVILRKPSLFDDDESETS-SRFNISPNLALKMAKERQKETFSDMTLLRKPELTNTNPI 179
VPNVILRKP+ +++D+ E SR + PNL+LKM+ KE +SDMTLLRKPE +N +
Sbjct: 151 VPNVILRKPTTYNEDDVEDKPSRIRMKPNLSLKMSNVSTKEKYSDMTLLRKPEPMTSNEV 210
Query: 180 LDRENGISDG 209
+D E DG
Sbjct: 211 IDEEKLSGDG 220
>ref|XP_006352282.1| PREDICTED: uncharacterized protein LOC102596782 [Solanum tuberosum]
Length = 912
Score = 71.6 bits (174), Expect = 1e-10
Identities = 38/72 (52%), Positives = 48/72 (66%)
Frame = +3
Query: 3 VPNVILRKPSLFDDDESETSSRFNISPNLALKMAKERQKETFSDMTLLRKPELTNTNPIL 182
VPNVILRKPSL+ +++ SS+F I PNL LKM KE + E FSD+TLL+KPE +
Sbjct: 253 VPNVILRKPSLYSEEDE--SSKFKIKPNLTLKMGKELKPEKFSDVTLLKKPEPMRISSDD 310
Query: 183 DRENGISDGSPS 218
+NG S PS
Sbjct: 311 SEKNGQSSDKPS 322
>gb|EMJ12096.1| hypothetical protein PRUPE_ppa001627mg [Prunus persica]
Length = 717
Score = 70.1 bits (170), Expect = 3e-10
Identities = 34/58 (58%), Positives = 44/58 (75%), Gaps = 1/58 (1%)
Frame = +3
Query: 3 VPNVILRKP-SLFDDDESETSSRFNISPNLALKMAKERQKETFSDMTLLRKPELTNTN 173
VPNVILRKP S ++DD+ + SSR I PNL++KM E+ KE FSDMTLLRKP+ + +
Sbjct: 187 VPNVILRKPTSYYEDDDEDMSSRLRIKPNLSVKMRNEQPKEMFSDMTLLRKPQAVSVD 244
>gb|EMJ12095.1| hypothetical protein PRUPE_ppa001627mg [Prunus persica]
Length = 790
Score = 70.1 bits (170), Expect = 3e-10
Identities = 34/58 (58%), Positives = 44/58 (75%), Gaps = 1/58 (1%)
Frame = +3
Query: 3 VPNVILRKP-SLFDDDESETSSRFNISPNLALKMAKERQKETFSDMTLLRKPELTNTN 173
VPNVILRKP S ++DD+ + SSR I PNL++KM E+ KE FSDMTLLRKP+ + +
Sbjct: 187 VPNVILRKPTSYYEDDDEDMSSRLRIKPNLSVKMRNEQPKEMFSDMTLLRKPQAVSVD 244
>ref|XP_006477448.1| PREDICTED: uncharacterized protein LOC102625164 isoform X2 [Citrus
sinensis]
Length = 739
Score = 69.7 bits (169), Expect = 4e-10
Identities = 36/68 (52%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
Frame = +3
Query: 3 VPNVILRKPSLFD-DDESETSSRFNISPNLALKMAKERQKETFSDMTLLRKPELTNTNPI 179
+PNVILRKP++ + DD + SR + PNL+LKM E+ KE FSDMTLLR+PE T N
Sbjct: 176 IPNVILRKPTMVNADDVEDMPSRLRMKPNLSLKMKNEQAKEKFSDMTLLRRPEATTVNVN 235
Query: 180 LDRENGIS 203
D++ IS
Sbjct: 236 DDKKADIS 243
>ref|XP_006477447.1| PREDICTED: uncharacterized protein LOC102625164 isoform X1 [Citrus
sinensis]
Length = 758
Score = 69.7 bits (169), Expect = 4e-10
Identities = 36/68 (52%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
Frame = +3
Query: 3 VPNVILRKPSLFD-DDESETSSRFNISPNLALKMAKERQKETFSDMTLLRKPELTNTNPI 179
+PNVILRKP++ + DD + SR + PNL+LKM E+ KE FSDMTLLR+PE T N
Sbjct: 176 IPNVILRKPTMVNADDVEDMPSRLRMKPNLSLKMKNEQAKEKFSDMTLLRRPEATTVNVN 235
Query: 180 LDRENGIS 203
D++ IS
Sbjct: 236 DDKKADIS 243
>ref|XP_006440592.1| hypothetical protein CICLE_v10024399mg [Citrus clementina]
gi|557542854|gb|ESR53832.1| hypothetical protein
CICLE_v10024399mg [Citrus clementina]
Length = 758
Score = 69.7 bits (169), Expect = 4e-10
Identities = 36/68 (52%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
Frame = +3
Query: 3 VPNVILRKPSLFD-DDESETSSRFNISPNLALKMAKERQKETFSDMTLLRKPELTNTNPI 179
+PNVILRKP++ + DD + SR + PNL+LKM E+ KE FSDMTLLR+PE T N
Sbjct: 176 IPNVILRKPTMVNADDVEDMPSRLRMKPNLSLKMKNEQAKEKFSDMTLLRRPEATTVNVN 235
Query: 180 LDRENGIS 203
D++ IS
Sbjct: 236 DDKKADIS 243
>ref|XP_004503759.1| PREDICTED: bromodomain testis-specific protein-like [Cicer
arietinum]
Length = 809
Score = 69.3 bits (168), Expect = 5e-10
Identities = 37/57 (64%), Positives = 42/57 (73%), Gaps = 5/57 (8%)
Frame = +3
Query: 3 VPNVILRKPSLFDDDESE-----TSSRFNISPNLALKMAKERQKETFSDMTLLRKPE 158
VPNVILRKPSL+ +DE+E SSR I PNL+LKM + KE FSDMTLLRKPE
Sbjct: 165 VPNVILRKPSLYKEDENEDESEGNSSRLRIRPNLSLKMQSGQVKEKFSDMTLLRKPE 221
>ref|XP_006306831.1| hypothetical protein CARUB_v10008376mg [Capsella rubella]
gi|482575542|gb|EOA39729.1| hypothetical protein
CARUB_v10008376mg [Capsella rubella]
Length = 766
Score = 68.6 bits (166), Expect = 8e-10
Identities = 40/73 (54%), Positives = 47/73 (64%), Gaps = 4/73 (5%)
Frame = +3
Query: 3 VPNVILRKPSLF----DDDESETSSRFNISPNLALKMAKERQKETFSDMTLLRKPELTNT 170
+PNVILRKPS F DDDE S+ + PNL LKM ER+ E FSDMTLLRKPE N
Sbjct: 173 LPNVILRKPSSFYVSNDDDEE---SKLRLKPNLTLKMRNERENERFSDMTLLRKPEPVNV 229
Query: 171 NPILDRENGISDG 209
+ + E +SDG
Sbjct: 230 D-AEEEEKTLSDG 241
>ref|XP_004244605.1| PREDICTED: uncharacterized protein LOC101250822 [Solanum
lycopersicum]
Length = 883
Score = 67.4 bits (163), Expect = 2e-09
Identities = 36/72 (50%), Positives = 47/72 (65%)
Frame = +3
Query: 3 VPNVILRKPSLFDDDESETSSRFNISPNLALKMAKERQKETFSDMTLLRKPELTNTNPIL 182
VPNVILRKPSL+ +++ SS+F I PNL LKM +E + E FSD+TLL+KPE +
Sbjct: 253 VPNVILRKPSLYSEEDE--SSKFKIKPNLTLKMGRELKPEKFSDVTLLKKPEPMRISSDD 310
Query: 183 DRENGISDGSPS 218
+NG S S
Sbjct: 311 SEKNGQSSDKSS 322
>ref|XP_006385758.1| hypothetical protein POPTR_0003s12430g [Populus trichocarpa]
gi|550343039|gb|ERP63555.1| hypothetical protein
POPTR_0003s12430g [Populus trichocarpa]
Length = 799
Score = 66.2 bits (160), Expect = 4e-09
Identities = 34/54 (62%), Positives = 41/54 (75%), Gaps = 3/54 (5%)
Frame = +3
Query: 3 VPNVILRKPSLFDDDESE---TSSRFNISPNLALKMAKERQKETFSDMTLLRKP 155
VPNVILRKPSL+ +D+ E + +R NI PNL LKM ++ KE FSDMTLLRKP
Sbjct: 176 VPNVILRKPSLYVEDDVEDRPSRNRVNILPNLTLKMGNDQNKEKFSDMTLLRKP 229
>ref|XP_002304482.2| S1 RNA-binding domain-containing family protein [Populus
trichocarpa] gi|550343038|gb|EEE79461.2| S1 RNA-binding
domain-containing family protein [Populus trichocarpa]
Length = 816
Score = 66.2 bits (160), Expect = 4e-09
Identities = 34/54 (62%), Positives = 41/54 (75%), Gaps = 3/54 (5%)
Frame = +3
Query: 3 VPNVILRKPSLFDDDESE---TSSRFNISPNLALKMAKERQKETFSDMTLLRKP 155
VPNVILRKPSL+ +D+ E + +R NI PNL LKM ++ KE FSDMTLLRKP
Sbjct: 193 VPNVILRKPSLYVEDDVEDRPSRNRVNILPNLTLKMGNDQNKEKFSDMTLLRKP 246
>gb|EXB37387.1| 30S ribosomal protein S1 [Morus notabilis]
Length = 1032
Score = 65.1 bits (157), Expect = 9e-09
Identities = 36/73 (49%), Positives = 48/73 (65%), Gaps = 5/73 (6%)
Frame = +3
Query: 3 VPNVILRKPSLFDD-DESETSSRFNISPNLALKMAKERQKETFSDMTLLRKPELTNTNPI 179
VPNVILRKP++ ++ D + SR + PNL+LKM + KE FSDMTLLRKPE + N
Sbjct: 179 VPNVILRKPNMVNEPDVDDKPSRLRLRPNLSLKMRNRQAKEEFSDMTLLRKPEPMSVNES 238
Query: 180 LD----RENGISD 206
D R++ +SD
Sbjct: 239 SDAKEERKDDVSD 251
>emb|CBI34709.3| unnamed protein product [Vitis vinifera]
Length = 707
Score = 63.5 bits (153), Expect = 3e-08
Identities = 38/71 (53%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
Frame = +3
Query: 3 VPNVILRKPSLFDDDESETS-SRFNISPNLALKMAKERQKETFSDMTLLRKPELTNTNPI 179
VPNVILRKP++F++D+ ++ SR + PNL+LKM KE + FSDMTLLRKPE T
Sbjct: 159 VPNVILRKPTVFNEDDVDSKPSRLRMKPNLSLKMKKEAK---FSDMTLLRKPEKL-TKIS 214
Query: 180 LDRENGISDGS 212
+ E G S GS
Sbjct: 215 IGIEEGSSSGS 225
>gb|ESW32036.1| hypothetical protein PHAVU_002G287600g [Phaseolus vulgaris]
Length = 732
Score = 63.2 bits (152), Expect = 4e-08
Identities = 34/75 (45%), Positives = 49/75 (65%), Gaps = 5/75 (6%)
Frame = +3
Query: 3 VPNVILRKPSLFDDDES--ETSSRFNISPNLALKMAKERQKETFSDMTLLRKPE---LTN 167
VPNVILRKP++F DD +SR + PNL+LKM E+ KE FS+MTLL+KPE +
Sbjct: 169 VPNVILRKPTVFKDDGDVGTLTSRLRMKPNLSLKMGDEQVKEKFSNMTLLKKPEPPVAKS 228
Query: 168 TNPILDRENGISDGS 212
T+ + + + + G+
Sbjct: 229 TDMVEETSSNVDQGN 243
>ref|XP_002892714.1| S1 RNA-binding domain-containing protein [Arabidopsis lyrata subsp.
lyrata] gi|297338556|gb|EFH68973.1| S1 RNA-binding
domain-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 768
Score = 63.2 bits (152), Expect = 4e-08
Identities = 34/56 (60%), Positives = 39/56 (69%), Gaps = 4/56 (7%)
Frame = +3
Query: 3 VPNVILRKPSLF----DDDESETSSRFNISPNLALKMAKERQKETFSDMTLLRKPE 158
+PNVILRKPS F DDDE S+ + PNL LKM ER+ E FSDMTLL+KPE
Sbjct: 169 LPNVILRKPSSFYTSNDDDEE---SKLRLKPNLTLKMRNERENERFSDMTLLKKPE 221