BLASTX nr result
ID: Catharanthus22_contig00020980
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00020980
(542 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOY05749.1| ATP-dependent RNA helicase, mitochondrial (SUV3) ... 108 1e-21
gb|EOY05748.1| ATP-dependent RNA and DNA helicase, putative isof... 108 1e-21
gb|EOY05745.1| ATP-dependent RNA and DNA helicase, putative isof... 108 1e-21
ref|XP_004247583.1| PREDICTED: ATP-dependent RNA helicase SUPV3L... 107 2e-21
ref|XP_006360763.1| PREDICTED: ATP-dependent RNA helicase SUPV3L... 106 3e-21
emb|CBI26285.3| unnamed protein product [Vitis vinifera] 105 7e-21
ref|XP_002279035.1| PREDICTED: ATP-dependent RNA helicase SUPV3L... 104 1e-20
gb|EOY05747.1| ATP-dependent RNA helicase, mitochondrial (SUV3) ... 99 6e-19
gb|EOY05746.1| ATP-dependent RNA and DNA helicase, putative isof... 99 6e-19
gb|ESW29100.1| hypothetical protein PHAVU_002G043200g [Phaseolus... 97 2e-18
gb|EMJ23250.1| hypothetical protein PRUPE_ppa003115mg [Prunus pe... 97 3e-18
gb|EPS66047.1| hypothetical protein M569_08726, partial [Genlise... 96 4e-18
ref|XP_004296632.1| PREDICTED: ATP-dependent RNA helicase SUPV3L... 95 1e-17
ref|XP_004134129.1| PREDICTED: ATP-dependent RNA helicase SUPV3L... 93 5e-17
ref|XP_006573870.1| PREDICTED: ATP-dependent RNA helicase SUPV3L... 92 6e-17
ref|XP_006573869.1| PREDICTED: ATP-dependent RNA helicase SUPV3L... 92 6e-17
ref|XP_006378385.1| hypothetical protein POPTR_0010s09420g [Popu... 92 1e-16
ref|XP_002315757.1| hypothetical protein POPTR_0010s09420g [Popu... 92 1e-16
ref|XP_006283425.1| hypothetical protein CARUB_v10004473mg [Caps... 91 2e-16
emb|CAB10258.1| RNA helicase like protein [Arabidopsis thaliana]... 90 3e-16
>gb|EOY05749.1| ATP-dependent RNA helicase, mitochondrial (SUV3) isoform 5
[Theobroma cacao]
Length = 412
Score = 108 bits (269), Expect = 1e-21
Identities = 53/92 (57%), Positives = 62/92 (67%)
Frame = -2
Query: 277 RRRLSASVACHVLPENTTVCLIPLELKFGISKGFFNCFRQFSSSSSTIKFDFTDLTCPHT 98
+RR+SA +L +N + LE KF R++SS S KFDFTDLTCPHT
Sbjct: 8 QRRVSALGVSRILQDNGDSFRLRLESKFETFASIGVMIRKYSSGKSAAKFDFTDLTCPHT 67
Query: 97 WYPNARKKKRNIFLHVGPTNSGKTHQALKRLE 2
WYPNARKK R +FLHVGPTNSGKT+ ALKRLE
Sbjct: 68 WYPNARKKNRKVFLHVGPTNSGKTYHALKRLE 99
>gb|EOY05748.1| ATP-dependent RNA and DNA helicase, putative isoform 4 [Theobroma
cacao]
Length = 571
Score = 108 bits (269), Expect = 1e-21
Identities = 53/92 (57%), Positives = 62/92 (67%)
Frame = -2
Query: 277 RRRLSASVACHVLPENTTVCLIPLELKFGISKGFFNCFRQFSSSSSTIKFDFTDLTCPHT 98
+RR+SA +L +N + LE KF R++SS S KFDFTDLTCPHT
Sbjct: 8 QRRVSALGVSRILQDNGDSFRLRLESKFETFASIGVMIRKYSSGKSAAKFDFTDLTCPHT 67
Query: 97 WYPNARKKKRNIFLHVGPTNSGKTHQALKRLE 2
WYPNARKK R +FLHVGPTNSGKT+ ALKRLE
Sbjct: 68 WYPNARKKNRKVFLHVGPTNSGKTYHALKRLE 99
>gb|EOY05745.1| ATP-dependent RNA and DNA helicase, putative isoform 1 [Theobroma
cacao]
Length = 570
Score = 108 bits (269), Expect = 1e-21
Identities = 53/92 (57%), Positives = 62/92 (67%)
Frame = -2
Query: 277 RRRLSASVACHVLPENTTVCLIPLELKFGISKGFFNCFRQFSSSSSTIKFDFTDLTCPHT 98
+RR+SA +L +N + LE KF R++SS S KFDFTDLTCPHT
Sbjct: 8 QRRVSALGVSRILQDNGDSFRLRLESKFETFASIGVMIRKYSSGKSAAKFDFTDLTCPHT 67
Query: 97 WYPNARKKKRNIFLHVGPTNSGKTHQALKRLE 2
WYPNARKK R +FLHVGPTNSGKT+ ALKRLE
Sbjct: 68 WYPNARKKNRKVFLHVGPTNSGKTYHALKRLE 99
>ref|XP_004247583.1| PREDICTED: ATP-dependent RNA helicase SUPV3L1, mitochondrial-like
[Solanum lycopersicum]
Length = 569
Score = 107 bits (267), Expect = 2e-21
Identities = 56/100 (56%), Positives = 69/100 (69%), Gaps = 2/100 (2%)
Frame = -2
Query: 295 MAFFVFRRRLSASVACH--VLPENTTVCLIPLELKFGISKGFFNCFRQFSSSSSTIKFDF 122
MA +FRRRLS + + +L L+P + S G NC R+FSSS++ K DF
Sbjct: 1 MASLLFRRRLSPASISYKTLLNGGGEFYLLPGNMATEASFGICNCLRKFSSSTAARKVDF 60
Query: 121 TDLTCPHTWYPNARKKKRNIFLHVGPTNSGKTHQALKRLE 2
TDLT PHTWYP+ARKK RN+FLHVGPTNSGKT+ ALK+LE
Sbjct: 61 TDLTRPHTWYPHARKKSRNVFLHVGPTNSGKTYYALKQLE 100
>ref|XP_006360763.1| PREDICTED: ATP-dependent RNA helicase SUPV3L1, mitochondrial-like
[Solanum tuberosum]
Length = 569
Score = 106 bits (265), Expect = 3e-21
Identities = 55/100 (55%), Positives = 69/100 (69%), Gaps = 2/100 (2%)
Frame = -2
Query: 295 MAFFVFRRRLSASVACH--VLPENTTVCLIPLELKFGISKGFFNCFRQFSSSSSTIKFDF 122
M+ +FRRRLS + + +L L+P + S G NC R+FSSS++ K DF
Sbjct: 1 MSSLLFRRRLSPASVSYKSLLHGGGEFYLLPGNMATEASFGICNCLRKFSSSTAARKVDF 60
Query: 121 TDLTCPHTWYPNARKKKRNIFLHVGPTNSGKTHQALKRLE 2
TDLT PHTWYP+ARKK RN+FLHVGPTNSGKT+ ALK+LE
Sbjct: 61 TDLTRPHTWYPHARKKSRNVFLHVGPTNSGKTYYALKQLE 100
>emb|CBI26285.3| unnamed protein product [Vitis vinifera]
Length = 612
Score = 105 bits (262), Expect = 7e-21
Identities = 56/95 (58%), Positives = 61/95 (64%)
Frame = -2
Query: 286 FVFRRRLSASVACHVLPENTTVCLIPLELKFGISKGFFNCFRQFSSSSSTIKFDFTDLTC 107
F+ RR LS S LEL+F I G N RQFSSSSST K DF DLT
Sbjct: 5 FLLRRHLSFSGISPTFHGTMEPFHRHLELRFRILVGVCNRIRQFSSSSSTSKLDFMDLTH 64
Query: 106 PHTWYPNARKKKRNIFLHVGPTNSGKTHQALKRLE 2
PHTWYPNAR+K R + +HVGPTNSGKTH ALKRLE
Sbjct: 65 PHTWYPNARRKSRKVIMHVGPTNSGKTHHALKRLE 99
>ref|XP_002279035.1| PREDICTED: ATP-dependent RNA helicase SUPV3L1, mitochondrial-like
[Vitis vinifera]
Length = 572
Score = 104 bits (260), Expect = 1e-20
Identities = 50/69 (72%), Positives = 54/69 (78%)
Frame = -2
Query: 208 LELKFGISKGFFNCFRQFSSSSSTIKFDFTDLTCPHTWYPNARKKKRNIFLHVGPTNSGK 29
LEL+F I G N RQFSSSSST K DF DLT PHTWYPNAR+K R + +HVGPTNSGK
Sbjct: 35 LELRFRILVGVCNRIRQFSSSSSTSKLDFMDLTHPHTWYPNARRKSRKVIMHVGPTNSGK 94
Query: 28 THQALKRLE 2
TH ALKRLE
Sbjct: 95 THHALKRLE 103
>gb|EOY05747.1| ATP-dependent RNA helicase, mitochondrial (SUV3) isoform 3
[Theobroma cacao]
Length = 403
Score = 99.0 bits (245), Expect = 6e-19
Identities = 43/54 (79%), Positives = 47/54 (87%)
Frame = -2
Query: 163 RQFSSSSSTIKFDFTDLTCPHTWYPNARKKKRNIFLHVGPTNSGKTHQALKRLE 2
R++SS S KFDFTDLTCPHTWYPNARKK R +FLHVGPTNSGKT+ ALKRLE
Sbjct: 3 RKYSSGKSAAKFDFTDLTCPHTWYPNARKKNRKVFLHVGPTNSGKTYHALKRLE 56
>gb|EOY05746.1| ATP-dependent RNA and DNA helicase, putative isoform 2 [Theobroma
cacao]
Length = 527
Score = 99.0 bits (245), Expect = 6e-19
Identities = 43/54 (79%), Positives = 47/54 (87%)
Frame = -2
Query: 163 RQFSSSSSTIKFDFTDLTCPHTWYPNARKKKRNIFLHVGPTNSGKTHQALKRLE 2
R++SS S KFDFTDLTCPHTWYPNARKK R +FLHVGPTNSGKT+ ALKRLE
Sbjct: 3 RKYSSGKSAAKFDFTDLTCPHTWYPNARKKNRKVFLHVGPTNSGKTYHALKRLE 56
>gb|ESW29100.1| hypothetical protein PHAVU_002G043200g [Phaseolus vulgaris]
Length = 566
Score = 97.1 bits (240), Expect = 2e-18
Identities = 50/98 (51%), Positives = 62/98 (63%)
Frame = -2
Query: 295 MAFFVFRRRLSASVACHVLPENTTVCLIPLELKFGISKGFFNCFRQFSSSSSTIKFDFTD 116
MA F+ RR +A++ L N + + KF G N +SSSS I+ DFTD
Sbjct: 1 MASFLLRR--NANLFARSLLGNKEPSRLYFQFKFQSLGGAANMVHSYSSSSGRIRNDFTD 58
Query: 115 LTCPHTWYPNARKKKRNIFLHVGPTNSGKTHQALKRLE 2
LTCPH+WYP ARKK R + +HVGPTNSGKTH ALK+LE
Sbjct: 59 LTCPHSWYPKARKKHRRVIMHVGPTNSGKTHHALKQLE 96
>gb|EMJ23250.1| hypothetical protein PRUPE_ppa003115mg [Prunus persica]
Length = 601
Score = 96.7 bits (239), Expect = 3e-18
Identities = 45/69 (65%), Positives = 51/69 (73%)
Frame = -2
Query: 208 LELKFGISKGFFNCFRQFSSSSSTIKFDFTDLTCPHTWYPNARKKKRNIFLHVGPTNSGK 29
LELK F+ +Q+SSSS KFDFTDLT PHTWYP AR K+R + LH+GPTNSGK
Sbjct: 8 LELKVATLVDVFDKTKQYSSSSGATKFDFTDLTSPHTWYPKARSKQRKVILHMGPTNSGK 67
Query: 28 THQALKRLE 2
TH ALKRLE
Sbjct: 68 THNALKRLE 76
>gb|EPS66047.1| hypothetical protein M569_08726, partial [Genlisea aurea]
Length = 542
Score = 96.3 bits (238), Expect = 4e-18
Identities = 49/81 (60%), Positives = 57/81 (70%)
Frame = -2
Query: 244 VLPENTTVCLIPLELKFGISKGFFNCFRQFSSSSSTIKFDFTDLTCPHTWYPNARKKKRN 65
+L +N + L L LK S G C RQ SS S+ K DFTDLT PHTWYP AR +KR+
Sbjct: 6 LLIDNEVLYLPNLGLKLVSSFGASQCLRQLSSCSAANKVDFTDLTSPHTWYPIARSRKRS 65
Query: 64 IFLHVGPTNSGKTHQALKRLE 2
+ LHVGPTNSGKT+QALKRLE
Sbjct: 66 VTLHVGPTNSGKTYQALKRLE 86
>ref|XP_004296632.1| PREDICTED: ATP-dependent RNA helicase SUPV3L1, mitochondrial-like
[Fragaria vesca subsp. vesca]
Length = 573
Score = 94.7 bits (234), Expect = 1e-17
Identities = 51/100 (51%), Positives = 60/100 (60%), Gaps = 3/100 (3%)
Frame = -2
Query: 292 AFFVFRRRLSASVACHVL---PENTTVCLIPLELKFGISKGFFNCFRQFSSSSSTIKFDF 122
A + RRR+S++ L P N + LELK G + R +SSSS T DF
Sbjct: 3 ASLLLRRRVSSAGVSRTLQGLPGNVEPFCLHLELKVGALVSVSDKTRFYSSSSGTTSVDF 62
Query: 121 TDLTCPHTWYPNARKKKRNIFLHVGPTNSGKTHQALKRLE 2
DLT PHTWYP AR K R + LH+GPTNSGKTH ALKRLE
Sbjct: 63 LDLTSPHTWYPKARSKPRKVILHMGPTNSGKTHNALKRLE 102
>ref|XP_004134129.1| PREDICTED: ATP-dependent RNA helicase SUPV3L1, mitochondrial-like
[Cucumis sativus] gi|449504169|ref|XP_004162271.1|
PREDICTED: ATP-dependent RNA helicase SUPV3L1,
mitochondrial-like [Cucumis sativus]
Length = 560
Score = 92.8 bits (229), Expect = 5e-17
Identities = 43/57 (75%), Positives = 47/57 (82%)
Frame = -2
Query: 172 NCFRQFSSSSSTIKFDFTDLTCPHTWYPNARKKKRNIFLHVGPTNSGKTHQALKRLE 2
+C R +S S S FDFTDLTCPH+WYPNARKK R IFLH+GPTNSGKTH ALKRLE
Sbjct: 34 SCCRLYSISRSN--FDFTDLTCPHSWYPNARKKHRKIFLHMGPTNSGKTHNALKRLE 88
>ref|XP_006573870.1| PREDICTED: ATP-dependent RNA helicase SUPV3L1, mitochondrial-like
isoform X2 [Glycine max]
Length = 443
Score = 92.4 bits (228), Expect = 6e-17
Identities = 43/68 (63%), Positives = 50/68 (73%)
Frame = -2
Query: 205 ELKFGISKGFFNCFRQFSSSSSTIKFDFTDLTCPHTWYPNARKKKRNIFLHVGPTNSGKT 26
+LKF G N +SSS+ I+ DFTDLTCPHTWYP AR+K R + LHVGPTNSGKT
Sbjct: 29 QLKFLSLGGAANKVHPYSSSNGPIRNDFTDLTCPHTWYPQARRKHRRVILHVGPTNSGKT 88
Query: 25 HQALKRLE 2
H ALK+LE
Sbjct: 89 HHALKQLE 96
>ref|XP_006573869.1| PREDICTED: ATP-dependent RNA helicase SUPV3L1, mitochondrial-like
isoform X1 [Glycine max]
Length = 565
Score = 92.4 bits (228), Expect = 6e-17
Identities = 43/68 (63%), Positives = 50/68 (73%)
Frame = -2
Query: 205 ELKFGISKGFFNCFRQFSSSSSTIKFDFTDLTCPHTWYPNARKKKRNIFLHVGPTNSGKT 26
+LKF G N +SSS+ I+ DFTDLTCPHTWYP AR+K R + LHVGPTNSGKT
Sbjct: 29 QLKFLSLGGAANKVHPYSSSNGPIRNDFTDLTCPHTWYPQARRKHRRVILHVGPTNSGKT 88
Query: 25 HQALKRLE 2
H ALK+LE
Sbjct: 89 HHALKQLE 96
>ref|XP_006378385.1| hypothetical protein POPTR_0010s09420g [Populus trichocarpa]
gi|550329444|gb|ERP56182.1| hypothetical protein
POPTR_0010s09420g [Populus trichocarpa]
Length = 448
Score = 91.7 bits (226), Expect = 1e-16
Identities = 47/99 (47%), Positives = 61/99 (61%), Gaps = 2/99 (2%)
Frame = -2
Query: 292 AFFVFRRRLSASVACHVLPENTTVCLIPLELKFGISKGFFNCFRQFSSSSSTI--KFDFT 119
AF + R++S +L + +E + G G N R++S+S+ KFDF
Sbjct: 3 AFLLRHRQVSTLGVSGILKDKLDPSRPHVESRLGALAGVCNLLREYSTSNDNRAHKFDFL 62
Query: 118 DLTCPHTWYPNARKKKRNIFLHVGPTNSGKTHQALKRLE 2
DLTCPH WYP AR+K R IFLHVGPTNSGKT+ ALK+LE
Sbjct: 63 DLTCPHAWYPVARRKNRKIFLHVGPTNSGKTYHALKQLE 101
>ref|XP_002315757.1| hypothetical protein POPTR_0010s09420g [Populus trichocarpa]
gi|222864797|gb|EEF01928.1| hypothetical protein
POPTR_0010s09420g [Populus trichocarpa]
Length = 571
Score = 91.7 bits (226), Expect = 1e-16
Identities = 47/99 (47%), Positives = 61/99 (61%), Gaps = 2/99 (2%)
Frame = -2
Query: 292 AFFVFRRRLSASVACHVLPENTTVCLIPLELKFGISKGFFNCFRQFSSSSSTI--KFDFT 119
AF + R++S +L + +E + G G N R++S+S+ KFDF
Sbjct: 3 AFLLRHRQVSTLGVSGILKDKLDPSRPHVESRLGALAGVCNLLREYSTSNDNRAHKFDFL 62
Query: 118 DLTCPHTWYPNARKKKRNIFLHVGPTNSGKTHQALKRLE 2
DLTCPH WYP AR+K R IFLHVGPTNSGKT+ ALK+LE
Sbjct: 63 DLTCPHAWYPVARRKNRKIFLHVGPTNSGKTYHALKQLE 101
>ref|XP_006283425.1| hypothetical protein CARUB_v10004473mg [Capsella rubella]
gi|482552130|gb|EOA16323.1| hypothetical protein
CARUB_v10004473mg [Capsella rubella]
Length = 570
Score = 90.5 bits (223), Expect = 2e-16
Identities = 39/52 (75%), Positives = 45/52 (86%)
Frame = -2
Query: 157 FSSSSSTIKFDFTDLTCPHTWYPNARKKKRNIFLHVGPTNSGKTHQALKRLE 2
F+ + +T KFDFTDLTCPHTWYP ARKKKR + LHVGPTNSGKT++ALK LE
Sbjct: 61 FTGTEATSKFDFTDLTCPHTWYPIARKKKRKVILHVGPTNSGKTYRALKHLE 112
>emb|CAB10258.1| RNA helicase like protein [Arabidopsis thaliana]
gi|7268225|emb|CAB78521.1| RNA helicase like protein
[Arabidopsis thaliana]
Length = 442
Score = 90.1 bits (222), Expect = 3e-16
Identities = 39/52 (75%), Positives = 44/52 (84%)
Frame = -2
Query: 157 FSSSSSTIKFDFTDLTCPHTWYPNARKKKRNIFLHVGPTNSGKTHQALKRLE 2
F+ + +T KFDFTDLTCPHTWYP ARKKKR + LHVGPTNSGKT+ ALK LE
Sbjct: 100 FTGTGTTSKFDFTDLTCPHTWYPIARKKKRKVILHVGPTNSGKTYSALKHLE 151