BLASTX nr result
ID: Catharanthus22_contig00020748
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00020748
(606 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004298429.1| PREDICTED: pentatricopeptide repeat-containi... 243 2e-62
gb|EMJ28099.1| hypothetical protein PRUPE_ppa016366mg [Prunus pe... 237 2e-60
ref|XP_006348757.1| PREDICTED: pentatricopeptide repeat-containi... 235 6e-60
gb|EXB69694.1| hypothetical protein L484_002149 [Morus notabilis] 235 8e-60
ref|XP_004239112.1| PREDICTED: pentatricopeptide repeat-containi... 235 8e-60
gb|EOY01914.1| Pentatricopeptide repeat (PPR) superfamily protei... 234 1e-59
ref|XP_002269694.1| PREDICTED: pentatricopeptide repeat-containi... 234 1e-59
ref|XP_003613787.1| Pentatricopeptide repeat-containing protein ... 230 2e-58
ref|XP_006438696.1| hypothetical protein CICLE_v10031011mg [Citr... 229 6e-58
ref|XP_004135453.1| PREDICTED: pentatricopeptide repeat-containi... 228 1e-57
ref|XP_006395744.1| hypothetical protein EUTSA_v10003852mg [Eutr... 226 5e-57
ref|XP_002316137.1| pentatricopeptide repeat-containing family p... 226 5e-57
ref|XP_004490064.1| PREDICTED: pentatricopeptide repeat-containi... 225 8e-57
ref|NP_178398.1| RNA editing factor OTP85 [Arabidopsis thaliana]... 224 1e-56
gb|AAM77644.1|AF517844_1 hypothetical protein [Arabidopsis thali... 224 1e-56
ref|XP_003517982.1| PREDICTED: pentatricopeptide repeat-containi... 224 1e-56
ref|XP_002875182.1| pentatricopeptide repeat-containing protein ... 222 7e-56
gb|ESW29612.1| hypothetical protein PHAVU_002G084700g [Phaseolus... 221 9e-56
ref|XP_006290747.1| hypothetical protein CARUB_v10016843mg [Caps... 219 6e-55
ref|XP_006650721.1| PREDICTED: pentatricopeptide repeat-containi... 217 2e-54
>ref|XP_004298429.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Fragaria vesca subsp. vesca]
Length = 593
Score = 243 bits (621), Expect = 2e-62
Identities = 122/203 (60%), Positives = 147/203 (72%), Gaps = 8/203 (3%)
Frame = +2
Query: 2 TLLAACSIHGNVNLGKKVTEQIQKLDNLHSGDYVIYSNMYAKAGQWEDVKEFRKKMKDKG 181
TLL+AC+ HG+V++G +V EQI +LD+ H GDYVI SN+ A+AG+WEDV RK MKD+G
Sbjct: 394 TLLSACASHGDVDIGLRVLEQIFELDDSHGGDYVIISNLCARAGRWEDVDYLRKLMKDRG 453
Query: 182 LTKVPGCSLIEMNNAVHEFFSGGGDQE----LHQAVDKLFEKLKLVGYIPDIS----SDQ 337
+ K+PGCS IEM N VHEFFSG G++ LHQAVD+L E+LKL GY+PD S SD
Sbjct: 454 VVKIPGCSSIEMKNVVHEFFSGDGERSVSKVLHQAVDELIEELKLAGYVPDTSLVFHSDM 513
Query: 338 XXXXXXXXXIRLRYHSEKLAITFGLINSSAEETIRVVKNIRVCRDCHSAAKXXXXXXXXX 517
+ LRYHSEKLAIT+GL+NS+A TIRVVKN+RVC DCHSAAK
Sbjct: 514 ---DDRDRELSLRYHSEKLAITYGLLNSAAGTTIRVVKNLRVCGDCHSAAKYISLMFNRQ 570
Query: 518 XXXXDVQRFHHFRDGKCSCGDYW 586
DVQRFHHF+DGKCSCGDYW
Sbjct: 571 IVLRDVQRFHHFKDGKCSCGDYW 593
>gb|EMJ28099.1| hypothetical protein PRUPE_ppa016366mg [Prunus persica]
Length = 593
Score = 237 bits (605), Expect = 2e-60
Identities = 116/200 (58%), Positives = 141/200 (70%), Gaps = 5/200 (2%)
Frame = +2
Query: 2 TLLAACSIHGNVNLGKKVTEQIQKLDNLHSGDYVIYSNMYAKAGQWEDVKEFRKKMKDKG 181
TLL+AC HG+V++G +V EQI LD+ H GDYVI SN+ A+AG+WEDV RK M+D+G
Sbjct: 394 TLLSACGSHGDVDMGMRVLEQIFALDDSHGGDYVIISNLCARAGRWEDVDRLRKLMRDRG 453
Query: 182 LTKVPGCSLIEMNNAVHEFFSGGGDQE----LHQAVDKLFEKLKLVGYIPDIS-SDQXXX 346
+ K+PGCS IE+NN VHEFFSG G++ LHQAVDKL E+LKL GY+PD S
Sbjct: 454 IVKIPGCSSIEVNNVVHEFFSGDGERSVSTVLHQAVDKLVEELKLAGYVPDTSLVFHSNM 513
Query: 347 XXXXXXIRLRYHSEKLAITFGLINSSAEETIRVVKNIRVCRDCHSAAKXXXXXXXXXXXX 526
+ LRYHSEKLAI +GL+N+ TIRVVKN+RVC DCHSAAK
Sbjct: 514 EDKDREVSLRYHSEKLAIAYGLLNTPPGATIRVVKNLRVCGDCHSAAKYISLIFNRQIIL 573
Query: 527 XDVQRFHHFRDGKCSCGDYW 586
DVQRFHHF++GKCSCGDYW
Sbjct: 574 RDVQRFHHFKEGKCSCGDYW 593
>ref|XP_006348757.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980-like
[Solanum tuberosum]
Length = 605
Score = 235 bits (600), Expect = 6e-60
Identities = 117/200 (58%), Positives = 142/200 (71%), Gaps = 5/200 (2%)
Frame = +2
Query: 2 TLLAACSIHGNVNLGKKVTEQIQKLDNLHSGDYVIYSNMYAKAGQWEDVKEFRKKMKDKG 181
TLLAACSIHGNV+LGK V ++I +LD HSGDYVI+SNM A+AG+WE+V K MK++G
Sbjct: 406 TLLAACSIHGNVDLGKLVLQRIFELDKSHSGDYVIFSNMCARAGKWEEVNYIWKLMKERG 465
Query: 182 LTKVPGCSLIEMNNAVHEFFSGG----GDQELHQAVDKLFEKLKLVGYIPDIS-SDQXXX 346
+ K+PGCS +E+NN +HEFFSG +ELHQ VDKL EKLKLVGY+PD S + +
Sbjct: 466 IKKIPGCSSVEVNNVLHEFFSGEVMHIEHRELHQEVDKLIEKLKLVGYVPDTSIAFRPGL 525
Query: 347 XXXXXXIRLRYHSEKLAITFGLINSSAEETIRVVKNIRVCRDCHSAAKXXXXXXXXXXXX 526
LRYHSEKLAITFGL+NS +TIRVVKN+R+C DCHSAAK
Sbjct: 526 KDEDKEATLRYHSEKLAITFGLLNSPPGKTIRVVKNLRICGDCHSAAKFISLIFKRNIII 585
Query: 527 XDVQRFHHFRDGKCSCGDYW 586
D+ RFHHF G CSCGD+W
Sbjct: 586 RDLHRFHHFEGGNCSCGDFW 605
>gb|EXB69694.1| hypothetical protein L484_002149 [Morus notabilis]
Length = 594
Score = 235 bits (599), Expect = 8e-60
Identities = 118/199 (59%), Positives = 141/199 (70%), Gaps = 4/199 (2%)
Frame = +2
Query: 2 TLLAACSIHGNVNLGKKVTEQIQKLDNLHSGDYVIYSNMYAKAGQWEDVKEFRKKMKDKG 181
TLL+ACS HG+V LGK+V +I ++D+ H GDYVI SN+ AKAG+ EDV RK MK+KG
Sbjct: 396 TLLSACSSHGSVELGKQVIRRIFEIDDSHGGDYVILSNLCAKAGRREDVDFLRKMMKEKG 455
Query: 182 LTKVPGCSLIEMNNAVHEFFSGGGDQ----ELHQAVDKLFEKLKLVGYIPDISSDQXXXX 349
KVPGCS IE+NN VHEFFSG G++ ELH A+D+L E+LKL GY+PD S
Sbjct: 456 GVKVPGCSSIEVNNVVHEFFSGDGERSVSTELHSALDELVEELKLSGYVPDTSLVSHDME 515
Query: 350 XXXXXIRLRYHSEKLAITFGLINSSAEETIRVVKNIRVCRDCHSAAKXXXXXXXXXXXXX 529
I LRYHSEKLAI +GL+++ A TIRVVKN+RVCRDCHSAAK
Sbjct: 516 EEEKEITLRYHSEKLAIAYGLLSTPAGTTIRVVKNLRVCRDCHSAAKFISLVSRRQIILR 575
Query: 530 DVQRFHHFRDGKCSCGDYW 586
DVQRFHHF +GKCSCGDYW
Sbjct: 576 DVQRFHHFNEGKCSCGDYW 594
>ref|XP_004239112.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980-like
[Solanum lycopersicum]
Length = 605
Score = 235 bits (599), Expect = 8e-60
Identities = 118/200 (59%), Positives = 141/200 (70%), Gaps = 5/200 (2%)
Frame = +2
Query: 2 TLLAACSIHGNVNLGKKVTEQIQKLDNLHSGDYVIYSNMYAKAGQWEDVKEFRKKMKDKG 181
TLLAACSIHGNV+LGK V E+I +LD HSGDYVI+SNM A+AG+WE+V MK++G
Sbjct: 406 TLLAACSIHGNVDLGKLVLERIFELDKSHSGDYVIFSNMCARAGKWEEVNYIWNLMKERG 465
Query: 182 LTKVPGCSLIEMNNAVHEFFSGG----GDQELHQAVDKLFEKLKLVGYIPDIS-SDQXXX 346
+ K+PGCS IE+NN +HEFFSG +ELHQ VDKL EKLKLVGY+PD S + +
Sbjct: 466 IKKIPGCSSIEVNNVLHEFFSGEVTCIEHRELHQEVDKLIEKLKLVGYVPDTSIAFRPGL 525
Query: 347 XXXXXXIRLRYHSEKLAITFGLINSSAEETIRVVKNIRVCRDCHSAAKXXXXXXXXXXXX 526
LRYHSEKLAITFGL+NS +TIRVVKN+R+C DCHSAAK
Sbjct: 526 NDEDKEATLRYHSEKLAITFGLLNSPPGKTIRVVKNLRICGDCHSAAKFISLIFKRNIII 585
Query: 527 XDVQRFHHFRDGKCSCGDYW 586
D+ RFHHF G CSCGD+W
Sbjct: 586 RDLHRFHHFEGGNCSCGDFW 605
>gb|EOY01914.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma cacao]
Length = 604
Score = 234 bits (598), Expect = 1e-59
Identities = 117/200 (58%), Positives = 142/200 (71%), Gaps = 5/200 (2%)
Frame = +2
Query: 2 TLLAACSIHGNVNLGKKVTEQIQKLDNLHSGDYVIYSNMYAKAGQWEDVKEFRKKMKDKG 181
TLLAACS HG+V LGK+V E+I +LD+ H GDYVI SN+ A+AG+WEDV RK MKD+G
Sbjct: 405 TLLAACSSHGDVELGKRVIERIFELDDSHGGDYVILSNLCARAGRWEDVDFLRKLMKDRG 464
Query: 182 LTKVPGCSLIEMNNAVHEFFSGGG----DQELHQAVDKLFEKLKLVGYIPDIS-SDQXXX 346
+ KVPGCS IE++N VHEFFSG G LH+A+D+L ++LK+VGY+PD S
Sbjct: 465 VVKVPGCSSIEVDNVVHEFFSGDGVNTVSTSLHKALDELMKELKMVGYVPDTSLVFHPEM 524
Query: 347 XXXXXXIRLRYHSEKLAITFGLINSSAEETIRVVKNIRVCRDCHSAAKXXXXXXXXXXXX 526
I LRYHSEKLAI +GL+N+ TIRVVKN+RVC DCH+AAK
Sbjct: 525 GEEEKEISLRYHSEKLAIAYGLLNTPPGSTIRVVKNLRVCGDCHAAAKLISQIFDRQIIL 584
Query: 527 XDVQRFHHFRDGKCSCGDYW 586
DVQRFHHFRDGKCSCGD+W
Sbjct: 585 RDVQRFHHFRDGKCSCGDFW 604
>ref|XP_002269694.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980
[Vitis vinifera] gi|296086362|emb|CBI31951.3| unnamed
protein product [Vitis vinifera]
Length = 595
Score = 234 bits (597), Expect = 1e-59
Identities = 115/200 (57%), Positives = 141/200 (70%), Gaps = 5/200 (2%)
Frame = +2
Query: 2 TLLAACSIHGNVNLGKKVTEQIQKLDNLHSGDYVIYSNMYAKAGQWEDVKEFRKKMKDKG 181
TLL+AC HGNV LGK+V EQI +LD+ H GDY+I SN+ A+AG+WEDV RK M ++G
Sbjct: 396 TLLSACGSHGNVELGKRVIEQIFELDDSHGGDYIILSNLCARAGRWEDVNYVRKLMNERG 455
Query: 182 LTKVPGCSLIEMNNAVHEFFSGGG----DQELHQAVDKLFEKLKLVGYIPDIS-SDQXXX 346
+ K+PGCS +E+NN VHEFFSG G +LHQA+D+L ++LKLVGY+P+ S
Sbjct: 456 VVKIPGCSSVEVNNVVHEFFSGDGVHSVSTKLHQALDELVKELKLVGYVPNTSLVFHADM 515
Query: 347 XXXXXXIRLRYHSEKLAITFGLINSSAEETIRVVKNIRVCRDCHSAAKXXXXXXXXXXXX 526
+ LRYHSEKLAITFGL+N+ TIRVVKN+RVC DCHSAAK
Sbjct: 516 EDEEKEVTLRYHSEKLAITFGLLNTPPGTTIRVVKNLRVCGDCHSAAKLISLIFDRQIIL 575
Query: 527 XDVQRFHHFRDGKCSCGDYW 586
DVQRFHHF+DGKCSC DYW
Sbjct: 576 RDVQRFHHFKDGKCSCEDYW 595
>ref|XP_003613787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355515122|gb|AES96745.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 586
Score = 230 bits (587), Expect = 2e-58
Identities = 114/200 (57%), Positives = 139/200 (69%), Gaps = 5/200 (2%)
Frame = +2
Query: 2 TLLAACSIHGNVNLGKKVTEQIQKLDNLHSGDYVIYSNMYAKAGQWEDVKEFRKKMKDKG 181
TLL+ACS HGNV +GK+V E+I +LD+ H GDYVI+SN+ A+ G+W+DV RK M DKG
Sbjct: 387 TLLSACSTHGNVEMGKRVIERIFELDDSHGGDYVIFSNLCARYGKWDDVNHLRKTMIDKG 446
Query: 182 LTKVPGCSLIEMNNAVHEFFSGGG----DQELHQAVDKLFEKLKLVGYIPDIS-SDQXXX 346
K+PGCS IE+NN VHEFF+G G LH+A+D+L ++LK GY+PD S
Sbjct: 447 AVKIPGCSSIEVNNVVHEFFAGEGVHSTSTTLHRALDELVKELKSAGYVPDTSLVFYADM 506
Query: 347 XXXXXXIRLRYHSEKLAITFGLINSSAEETIRVVKNIRVCRDCHSAAKXXXXXXXXXXXX 526
I LRYHSEKLAITFGL+N+ TIRVVKN+RVC DCH+AAK
Sbjct: 507 EDEEKEIILRYHSEKLAITFGLLNTPPGTTIRVVKNLRVCGDCHNAAKFISLIFGRQIIL 566
Query: 527 XDVQRFHHFRDGKCSCGDYW 586
DVQRFHHF+DGKCSCGDYW
Sbjct: 567 RDVQRFHHFKDGKCSCGDYW 586
>ref|XP_006438696.1| hypothetical protein CICLE_v10031011mg [Citrus clementina]
gi|568859243|ref|XP_006483151.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g02980-like [Citrus sinensis]
gi|557540892|gb|ESR51936.1| hypothetical protein
CICLE_v10031011mg [Citrus clementina]
Length = 598
Score = 229 bits (583), Expect = 6e-58
Identities = 115/200 (57%), Positives = 140/200 (70%), Gaps = 5/200 (2%)
Frame = +2
Query: 2 TLLAACSIHGNVNLGKKVTEQIQKLDNLHSGDYVIYSNMYAKAGQWEDVKEFRKKMKDKG 181
TLL++CS H N+ L K+V E+I +LD+ H GDYVI SN+ A+AG+WEDV RK MKD+G
Sbjct: 399 TLLSSCSSHNNLGLAKQVIERIFELDDSHGGDYVILSNLCARAGRWEDVDYLRKLMKDRG 458
Query: 182 LTKVPGCSLIEMNNAVHEFFSGGG----DQELHQAVDKLFEKLKLVGYIPDIS-SDQXXX 346
+ KVPGCS IE+NN V EFFSG G +L +A+D+L ++LK+VGY+PD S
Sbjct: 459 VLKVPGCSSIEVNNVVREFFSGDGVHSYSTDLQKALDELVKELKMVGYVPDTSLVHHGDM 518
Query: 347 XXXXXXIRLRYHSEKLAITFGLINSSAEETIRVVKNIRVCRDCHSAAKXXXXXXXXXXXX 526
I LRYHSEKLAITFGL+N+ TIRVVKN+RVC DCHSAAK
Sbjct: 519 EDEEKEIALRYHSEKLAITFGLLNTPPGTTIRVVKNLRVCGDCHSAAKIISLIFNRQIVL 578
Query: 527 XDVQRFHHFRDGKCSCGDYW 586
DVQRFHHFRDGKCSCGD+W
Sbjct: 579 RDVQRFHHFRDGKCSCGDFW 598
>ref|XP_004135453.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980-like
[Cucumis sativus] gi|449478665|ref|XP_004155385.1|
PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Cucumis sativus]
Length = 604
Score = 228 bits (580), Expect = 1e-57
Identities = 110/200 (55%), Positives = 138/200 (69%), Gaps = 5/200 (2%)
Frame = +2
Query: 2 TLLAACSIHGNVNLGKKVTEQIQKLDNLHSGDYVIYSNMYAKAGQWEDVKEFRKKMKDKG 181
TLL+ACS HGNV + K+V E+I +LD+ H GDYVI SN+YA+ G+WEDV RK MKD+G
Sbjct: 405 TLLSACSTHGNVEMAKRVIERIFELDDAHGGDYVILSNLYARVGRWEDVNHLRKLMKDRG 464
Query: 182 LTKVPGCSLIEMNNAVHEFFSGGG----DQELHQAVDKLFEKLKLVGYIPDIS-SDQXXX 346
+ KVPGCS +E+NN VHEFFSG G EL +A+D+L +++KLVGY+PD S
Sbjct: 465 VVKVPGCSSVEVNNVVHEFFSGDGVHCVSVELRRALDELMKEIKLVGYVPDTSLVYHADM 524
Query: 347 XXXXXXIRLRYHSEKLAITFGLINSSAEETIRVVKNIRVCRDCHSAAKXXXXXXXXXXXX 526
+ LRYHSEKLA+ FGL+N+ TIRV KN+R+C DCH+AAK
Sbjct: 525 EEEGKELVLRYHSEKLAMAFGLLNTPPGTTIRVAKNLRICGDCHNAAKLISFIFGRKIVI 584
Query: 527 XDVQRFHHFRDGKCSCGDYW 586
DVQRFH F DGKCSCGD+W
Sbjct: 585 RDVQRFHRFEDGKCSCGDFW 604
>ref|XP_006395744.1| hypothetical protein EUTSA_v10003852mg [Eutrema salsugineum]
gi|557092383|gb|ESQ33030.1| hypothetical protein
EUTSA_v10003852mg [Eutrema salsugineum]
Length = 605
Score = 226 bits (575), Expect = 5e-57
Identities = 112/199 (56%), Positives = 138/199 (69%), Gaps = 5/199 (2%)
Frame = +2
Query: 5 LLAACSIHGNVNLGKKVTEQIQKLDNLHSGDYVIYSNMYAKAGQWEDVKEFRKKMKDKGL 184
LL+ACS H N+ L +KV+E+I +LD+ H GDYV+ SN+YA+ +WEDV RK MKD+
Sbjct: 407 LLSACSSHNNLELAEKVSERIFELDDSHGGDYVMLSNLYARNKKWEDVDSLRKVMKDRRA 466
Query: 185 TKVPGCSLIEMNNAVHEFFSGGG----DQELHQAVDKLFEKLKLVGYIPDIS-SDQXXXX 349
KVPGCS IE+NN VHEFFSG G +LH+A+D++ ++LKL GY+PD S
Sbjct: 467 VKVPGCSSIEVNNVVHEFFSGDGVKSVTTKLHKALDEMVKELKLAGYVPDTSIVVHADMN 526
Query: 350 XXXXXIRLRYHSEKLAITFGLINSSAEETIRVVKNIRVCRDCHSAAKXXXXXXXXXXXXX 529
I LRYHSEKLAI FGL+N+ A TIRVVKN+RVCRDCH+AAK
Sbjct: 527 DQEKKITLRYHSEKLAIAFGLLNTPAGTTIRVVKNLRVCRDCHNAAKLISLIFGRKVVLR 586
Query: 530 DVQRFHHFRDGKCSCGDYW 586
DVQRFHHF DGKCSCGD+W
Sbjct: 587 DVQRFHHFEDGKCSCGDFW 605
>ref|XP_002316137.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|222865177|gb|EEF02308.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 601
Score = 226 bits (575), Expect = 5e-57
Identities = 114/200 (57%), Positives = 137/200 (68%), Gaps = 5/200 (2%)
Frame = +2
Query: 2 TLLAACSIHGNVNLGKKVTEQIQKLDNLHSGDYVIYSNMYAKAGQWEDVKEFRKKMKDKG 181
TLL++CS HGN+ L K+V QI +LD+ H GDYVI SN+ A+AG+WEDV RK M KG
Sbjct: 402 TLLSSCSSHGNLELAKQVMNQILELDDSHGGDYVILSNLCARAGKWEDVDTLRKLMIHKG 461
Query: 182 LTKVPGCSLIEMNNAVHEFFSGGG----DQELHQAVDKLFEKLKLVGYIPDIS-SDQXXX 346
K+PGCS IE++N VHEFFSG G LH+A+D+L ++LK VGY+PD S
Sbjct: 462 AVKIPGCSSIEVDNVVHEFFSGDGVHYVSTALHRALDELVKELKSVGYVPDTSLVVHPDM 521
Query: 347 XXXXXXIRLRYHSEKLAITFGLINSSAEETIRVVKNIRVCRDCHSAAKXXXXXXXXXXXX 526
I LRYHSEKLAI+FGL+N+ TIRVVKN+RVC DCHSAAK
Sbjct: 522 EDEEKEITLRYHSEKLAISFGLLNTPPGTTIRVVKNLRVCGDCHSAAKLISSLIDREIIL 581
Query: 527 XDVQRFHHFRDGKCSCGDYW 586
DVQRFHHF+DGKCSCGDYW
Sbjct: 582 RDVQRFHHFKDGKCSCGDYW 601
>ref|XP_004490064.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980-like
[Cicer arietinum]
Length = 602
Score = 225 bits (573), Expect = 8e-57
Identities = 111/200 (55%), Positives = 139/200 (69%), Gaps = 5/200 (2%)
Frame = +2
Query: 2 TLLAACSIHGNVNLGKKVTEQIQKLDNLHSGDYVIYSNMYAKAGQWEDVKEFRKKMKDKG 181
TLL+ACS HGNV +GK+V ++I +LD+ H GDYVI SN+ A+ G+W+DV RK M +KG
Sbjct: 403 TLLSACSSHGNVEMGKQVIQRIFELDDSHGGDYVILSNLCARYGKWDDVNHLRKMMIEKG 462
Query: 182 LTKVPGCSLIEMNNAVHEFFSGGG----DQELHQAVDKLFEKLKLVGYIPDIS-SDQXXX 346
K+PGCS IE+NN VHEFF+G G LH+A+D+L ++LKL GY+ D S
Sbjct: 463 AVKIPGCSSIEVNNVVHEFFAGDGVSMISTTLHRALDELVKELKLAGYVADTSLVFHPDM 522
Query: 347 XXXXXXIRLRYHSEKLAITFGLINSSAEETIRVVKNIRVCRDCHSAAKXXXXXXXXXXXX 526
I LRYHSEKLAIT+GL+N+ +TIRVVKN+RVC DCH+AAK
Sbjct: 523 EDEEKEIILRYHSEKLAITYGLLNTPPGKTIRVVKNLRVCGDCHNAAKFISLIFGRQIIL 582
Query: 527 XDVQRFHHFRDGKCSCGDYW 586
DVQRFHHF+DGKCSCGDYW
Sbjct: 583 RDVQRFHHFKDGKCSCGDYW 602
>ref|NP_178398.1| RNA editing factor OTP85 [Arabidopsis thaliana]
gi|218546779|sp|Q8LK93.2|PP145_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At2g02980 gi|3461822|gb|AAC32916.1| hypothetical protein
[Arabidopsis thaliana] gi|330250557|gb|AEC05651.1| RNA
editing factor OTP85 [Arabidopsis thaliana]
Length = 603
Score = 224 bits (572), Expect = 1e-56
Identities = 113/199 (56%), Positives = 139/199 (69%), Gaps = 5/199 (2%)
Frame = +2
Query: 5 LLAACSIHGNVNLGKKVTEQIQKLDNLHSGDYVIYSNMYAKAGQWEDVKEFRKKMKDKGL 184
LLAACS H N++L +KV+E+I +LD+ H GDYVI SN+YA+ +WE V RK MKD+
Sbjct: 405 LLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYARNKKWEYVDSLRKVMKDRKA 464
Query: 185 TKVPGCSLIEMNNAVHEFFSGGGDQ----ELHQAVDKLFEKLKLVGYIPDISSD-QXXXX 349
KVPGCS IE+NN VHEFFSG G + +LH+A+D++ ++LKL GY+PD S
Sbjct: 465 VKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMVKELKLSGYVPDTSMVVHANMN 524
Query: 350 XXXXXIRLRYHSEKLAITFGLINSSAEETIRVVKNIRVCRDCHSAAKXXXXXXXXXXXXX 529
I LRYHSEKLAITFGL+N+ TIRVVKN+RVCRDCH+AAK
Sbjct: 525 DQEKEITLRYHSEKLAITFGLLNTPPGTTIRVVKNLRVCRDCHNAAKLISLIFGRKVVLR 584
Query: 530 DVQRFHHFRDGKCSCGDYW 586
DVQRFHHF DGKCSCGD+W
Sbjct: 585 DVQRFHHFEDGKCSCGDFW 603
>gb|AAM77644.1|AF517844_1 hypothetical protein [Arabidopsis thaliana]
Length = 603
Score = 224 bits (572), Expect = 1e-56
Identities = 114/199 (57%), Positives = 140/199 (70%), Gaps = 5/199 (2%)
Frame = +2
Query: 5 LLAACSIHGNVNLGKKVTEQIQKLDNLHSGDYVIYSNMYAKAGQWEDVKEFRKKMKDKGL 184
LLAACS H N++L +KV+E+I +LD+ H GDYVI SN+YA+ +WE V RK MKD+
Sbjct: 405 LLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYARNKKWEYVDSLRKVMKDRKA 464
Query: 185 TKVPGCSLIEMNNAVHEFFSGGGDQ----ELHQAVDKLFEKLKLVGYIPDISSD-QXXXX 349
KVPGCS IE+NN VHEFFSG G + +LH+A+D++ ++LKL GY+PD S
Sbjct: 465 VKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMVKELKLSGYVPDTSMVVHANMN 524
Query: 350 XXXXXIRLRYHSEKLAITFGLINSSAEETIRVVKNIRVCRDCHSAAKXXXXXXXXXXXXX 529
I LRYHSEKLAITFGL+N+ TIRVVKN+RVCRDCH+AAK
Sbjct: 525 DQEKEITLRYHSEKLAITFGLLNTPPGTTIRVVKNLRVCRDCHNAAKLISLIFGRKVVXR 584
Query: 530 DVQRFHHFRDGKCSCGDYW 586
DVQRFHHF DGKCSCGD+W
Sbjct: 585 DVQRFHHFEDGKCSCGDFW 603
>ref|XP_003517982.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980-like
[Glycine max]
Length = 609
Score = 224 bits (571), Expect = 1e-56
Identities = 113/200 (56%), Positives = 136/200 (68%), Gaps = 5/200 (2%)
Frame = +2
Query: 2 TLLAACSIHGNVNLGKKVTEQIQKLDNLHSGDYVIYSNMYAKAGQWEDVKEFRKKMKDKG 181
TLL++CS HGNV + K V ++I +LD+ H GDYVI SN+ A+ G+W+DV RK M DKG
Sbjct: 410 TLLSSCSSHGNVEMAKLVIQRIFELDDSHGGDYVILSNLCARNGRWDDVNHLRKMMVDKG 469
Query: 182 LTKVPGCSLIEMNNAVHEFFSGGGDQE----LHQAVDKLFEKLKLVGYIPDIS-SDQXXX 346
KVPGCS IE+NN VHEFFSG G LH A+D+L ++LKL GY+PD S
Sbjct: 470 ALKVPGCSSIEVNNVVHEFFSGDGVHSTSTILHHALDELVKELKLAGYVPDTSLVFYADI 529
Query: 347 XXXXXXIRLRYHSEKLAITFGLINSSAEETIRVVKNIRVCRDCHSAAKXXXXXXXXXXXX 526
I LRYHSEKLAIT+GL+N+ TIRVVKN+RVC DCH+AAK
Sbjct: 530 EDEEKEIVLRYHSEKLAITYGLLNTPPGTTIRVVKNLRVCVDCHNAAKFISLIFGRQIIL 589
Query: 527 XDVQRFHHFRDGKCSCGDYW 586
DVQRFHHF+DGKCSCGDYW
Sbjct: 590 RDVQRFHHFKDGKCSCGDYW 609
>ref|XP_002875182.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297321020|gb|EFH51441.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 605
Score = 222 bits (565), Expect = 7e-56
Identities = 112/199 (56%), Positives = 135/199 (67%), Gaps = 5/199 (2%)
Frame = +2
Query: 5 LLAACSIHGNVNLGKKVTEQIQKLDNLHSGDYVIYSNMYAKAGQWEDVKEFRKKMKDKGL 184
LLAACS H N+ L +KV+E+I +LD+ H GDYVI SN+YA+ +WE V RK MKD+
Sbjct: 407 LLAACSSHNNLELAEKVSERILELDDSHGGDYVILSNLYARNKKWEAVDSLRKVMKDRKA 466
Query: 185 TKVPGCSLIEMNNAVHEFFSGGG----DQELHQAVDKLFEKLKLVGYIPDISS-DQXXXX 349
KVPGCS IE+NN VHEFFSG G +LH+A+D++ ++LKL GY+PD S
Sbjct: 467 VKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMVKELKLAGYVPDTSMVVHADMG 526
Query: 350 XXXXXIRLRYHSEKLAITFGLINSSAEETIRVVKNIRVCRDCHSAAKXXXXXXXXXXXXX 529
I LRYHSEKLAI FGL+N+ TIRVVKN+RVCRDCHSAAK
Sbjct: 527 DQEKEITLRYHSEKLAIAFGLLNTPPGTTIRVVKNLRVCRDCHSAAKLISLIFGRKVVLR 586
Query: 530 DVQRFHHFRDGKCSCGDYW 586
DVQRFHHF DGKCSC D+W
Sbjct: 587 DVQRFHHFEDGKCSCRDFW 605
>gb|ESW29612.1| hypothetical protein PHAVU_002G084700g [Phaseolus vulgaris]
Length = 600
Score = 221 bits (564), Expect = 9e-56
Identities = 112/200 (56%), Positives = 136/200 (68%), Gaps = 5/200 (2%)
Frame = +2
Query: 2 TLLAACSIHGNVNLGKKVTEQIQKLDNLHSGDYVIYSNMYAKAGQWEDVKEFRKKMKDKG 181
TLL++CS HGNV + K+V ++I +LD+ H GDYVI SN+ A+ G W+DV RK+M DKG
Sbjct: 401 TLLSSCSSHGNVEMAKQVIQRIFELDDSHGGDYVILSNLCARNGSWDDVNYVRKRMADKG 460
Query: 182 LTKVPGCSLIEMNNAVHEFFSGGG----DQELHQAVDKLFEKLKLVGYIPDIS-SDQXXX 346
KVPG S IE+NN VHEFFSG G LH A+D+L ++LKL GY+PD S
Sbjct: 461 ALKVPGVSSIEVNNVVHEFFSGDGVHSTSTVLHHALDELVKELKLAGYVPDTSLVFYADI 520
Query: 347 XXXXXXIRLRYHSEKLAITFGLINSSAEETIRVVKNIRVCRDCHSAAKXXXXXXXXXXXX 526
I LRYHSEKLAIT+GL+N+ TIRVVKN+RVC DCH+AAK
Sbjct: 521 EDEEKEIVLRYHSEKLAITYGLLNTPPGTTIRVVKNLRVCVDCHNAAKFISLIFGRQIIL 580
Query: 527 XDVQRFHHFRDGKCSCGDYW 586
DVQRFHHF+DGKCSCGDYW
Sbjct: 581 RDVQRFHHFKDGKCSCGDYW 600
>ref|XP_006290747.1| hypothetical protein CARUB_v10016843mg [Capsella rubella]
gi|482559454|gb|EOA23645.1| hypothetical protein
CARUB_v10016843mg [Capsella rubella]
Length = 630
Score = 219 bits (557), Expect = 6e-55
Identities = 111/199 (55%), Positives = 137/199 (68%), Gaps = 5/199 (2%)
Frame = +2
Query: 5 LLAACSIHGNVNLGKKVTEQIQKLDNLHSGDYVIYSNMYAKAGQWEDVKEFRKKMKDKGL 184
LL+ACS H N+ L +KV+E+I +LD+ H GDYVI SN+YA+ +WE V RK MKD+
Sbjct: 432 LLSACSSHNNLELAEKVSERIFELDDSHGGDYVILSNLYARNKKWEYVDSLRKVMKDRRA 491
Query: 185 TKVPGCSLIEMNNAVHEFFSGGGDQE----LHQAVDKLFEKLKLVGYIPDISSD-QXXXX 349
KVPG S IE+NN VHEFFSG G + L++A+D++ ++LKL GY+PD S
Sbjct: 492 VKVPGVSSIEVNNVVHEFFSGDGVKPATTTLYRALDEMVKELKLAGYVPDTSMVVHADMS 551
Query: 350 XXXXXIRLRYHSEKLAITFGLINSSAEETIRVVKNIRVCRDCHSAAKXXXXXXXXXXXXX 529
I LRYHSEKLAITFGL+N+ A TIRVVKN+RVCRDCH+AAK
Sbjct: 552 DKEKEITLRYHSEKLAITFGLLNTPAGTTIRVVKNLRVCRDCHNAAKLISLIFGRKVVLR 611
Query: 530 DVQRFHHFRDGKCSCGDYW 586
DVQRFHHF DGKCSCGD+W
Sbjct: 612 DVQRFHHFEDGKCSCGDFW 630
>ref|XP_006650721.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980-like
isoform X1 [Oryza brachyantha]
Length = 601
Score = 217 bits (553), Expect = 2e-54
Identities = 106/200 (53%), Positives = 136/200 (68%), Gaps = 5/200 (2%)
Frame = +2
Query: 2 TLLAACSIHGNVNLGKKVTEQIQKLDNLHSGDYVIYSNMYAKAGQWEDVKEFRKKMKDKG 181
TLL+AC HG+V++GK+V E+I +LD+ H GDYVI+SN+ A G+WE++ RK M +KG
Sbjct: 402 TLLSACGGHGDVDMGKRVFERIMELDDSHGGDYVIFSNLCANTGRWEEMNMVRKLMSEKG 461
Query: 182 LTKVPGCSLIEMNNAVHEFFSGGG----DQELHQAVDKLFEKLKLVGYIPDISS-DQXXX 346
+ KVPGCS IE++N VHEFFSG G QE + VD++ E+LKLVGY+P+ S
Sbjct: 462 VVKVPGCSSIEIDNMVHEFFSGDGRHPHSQEARRMVDEVIEQLKLVGYVPNTSHVFHVEM 521
Query: 347 XXXXXXIRLRYHSEKLAITFGLINSSAEETIRVVKNIRVCRDCHSAAKXXXXXXXXXXXX 526
LRYHSEKLAI+FGL+N+S T+R+VKN+RVC DCHS AK
Sbjct: 522 GEEEKATSLRYHSEKLAISFGLLNTSPGSTLRIVKNLRVCPDCHSMAKFVSMVFNRRIIL 581
Query: 527 XDVQRFHHFRDGKCSCGDYW 586
D+ RFHHF DG CSCGDYW
Sbjct: 582 RDLNRFHHFEDGVCSCGDYW 601