BLASTX nr result

ID: Catharanthus22_contig00020533 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00020533
         (265 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMJ26204.1| hypothetical protein PRUPE_ppa020300mg [Prunus pe...    64   2e-08
ref|XP_006354473.1| PREDICTED: putative pentatricopeptide repeat...    64   3e-08
ref|XP_004247740.1| PREDICTED: putative pentatricopeptide repeat...    64   3e-08
ref|XP_002266469.2| PREDICTED: putative pentatricopeptide repeat...    62   1e-07
emb|CBI31172.3| unnamed protein product [Vitis vinifera]               62   1e-07
ref|XP_006297059.1| hypothetical protein CARUB_v10013060mg [Caps...    58   1e-06
ref|XP_006491705.1| PREDICTED: putative pentatricopeptide repeat...    56   4e-06
ref|XP_006428361.1| hypothetical protein CICLE_v10013800mg [Citr...    56   4e-06
ref|XP_006406039.1| hypothetical protein EUTSA_v10020184mg [Eutr...    56   6e-06

>gb|EMJ26204.1| hypothetical protein PRUPE_ppa020300mg [Prunus persica]
          Length = 671

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 34/78 (43%), Positives = 48/78 (61%)
 Frame = -2

Query: 234 QTLVRTYLENQGLIRTKAHAKQLHAQVIRTIGPVTATVXXXXXXXXXXXXXLKESLTLFD 55
           QTL++T  +N   I++++ AKQLHAQ+++T GP    +             L +SLTLF+
Sbjct: 5   QTLLKTLFKNPSTIKSQSQAKQLHAQILKTKGPSPPDL-SFVLSVYSNLNLLHDSLTLFN 63

Query: 54  TLDSPKPTKAWKSIIKCY 1
           T  SP  T AWKSII+CY
Sbjct: 64  TFHSPPTTLAWKSIIRCY 81


>ref|XP_006354473.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Solanum tuberosum]
          Length = 738

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 33/83 (39%), Positives = 49/83 (59%)
 Frame = -2

Query: 249 MNTCHQTLVRTYLENQGLIRTKAHAKQLHAQVIRTIGPVTATVXXXXXXXXXXXXXLKES 70
           M +  + LV+T L N   I+TK+ AKQLHAQ+++T G  + ++             LKES
Sbjct: 1   MESSRENLVKTLLRNPSSIKTKSQAKQLHAQIVKTRGSRSVSLATIILGIYSDLNLLKES 60

Query: 69  LTLFDTLDSPKPTKAWKSIIKCY 1
           L +F+      PTKAWKS+++CY
Sbjct: 61  LEVFNNF-RYVPTKAWKSVVRCY 82


>ref|XP_004247740.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Solanum lycopersicum]
          Length = 699

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 33/83 (39%), Positives = 49/83 (59%)
 Frame = -2

Query: 249 MNTCHQTLVRTYLENQGLIRTKAHAKQLHAQVIRTIGPVTATVXXXXXXXXXXXXXLKES 70
           M +  + LV+T L N   I+TK+ AKQLHAQ+++T G  + ++             LKES
Sbjct: 1   MESSSENLVKTLLRNPSSIKTKSQAKQLHAQIVKTRGSRSVSLATIILGIYSDLNLLKES 60

Query: 69  LTLFDTLDSPKPTKAWKSIIKCY 1
           L +F+      PTKAWKS+++CY
Sbjct: 61  LEVFNNFHY-VPTKAWKSVVRCY 82


>ref|XP_002266469.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Vitis vinifera]
          Length = 709

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 35/83 (42%), Positives = 51/83 (61%)
 Frame = -2

Query: 249 MNTCHQTLVRTYLENQGLIRTKAHAKQLHAQVIRTIGPVTATVXXXXXXXXXXXXXLKES 70
           MNT  Q L +T L+N   +++K+ AKQLHAQ++RT  P + ++             L +S
Sbjct: 1   MNTT-QNLCKTLLQNPSSVKSKSQAKQLHAQILRTSLP-SPSLLSTILSIYSNLNLLHDS 58

Query: 69  LTLFDTLDSPKPTKAWKSIIKCY 1
           L +F++L SP  T AWKSII+CY
Sbjct: 59  LLIFNSLPSPPTTLAWKSIIRCY 81


>emb|CBI31172.3| unnamed protein product [Vitis vinifera]
          Length = 644

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 35/83 (42%), Positives = 51/83 (61%)
 Frame = -2

Query: 249 MNTCHQTLVRTYLENQGLIRTKAHAKQLHAQVIRTIGPVTATVXXXXXXXXXXXXXLKES 70
           MNT  Q L +T L+N   +++K+ AKQLHAQ++RT  P + ++             L +S
Sbjct: 1   MNTT-QNLCKTLLQNPSSVKSKSQAKQLHAQILRTSLP-SPSLLSTILSIYSNLNLLHDS 58

Query: 69  LTLFDTLDSPKPTKAWKSIIKCY 1
           L +F++L SP  T AWKSII+CY
Sbjct: 59  LLIFNSLPSPPTTLAWKSIIRCY 81


>ref|XP_006297059.1| hypothetical protein CARUB_v10013060mg [Capsella rubella]
           gi|482565768|gb|EOA29957.1| hypothetical protein
           CARUB_v10013060mg [Capsella rubella]
          Length = 730

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 34/78 (43%), Positives = 48/78 (61%)
 Frame = -2

Query: 234 QTLVRTYLENQGLIRTKAHAKQLHAQVIRTIGPVTATVXXXXXXXXXXXXXLKESLTLFD 55
           +TL+RT ++N   I++K+ AKQLHAQ IRT   ++ T              L E+L LF 
Sbjct: 5   KTLIRTLIQNPTRIKSKSQAKQLHAQFIRT-QSLSHTSASIVISIYTNLKLLHEALLLFK 63

Query: 54  TLDSPKPTKAWKSIIKCY 1
           TL+SP P  AWKS+I+C+
Sbjct: 64  TLESP-PVLAWKSVIRCF 80


>ref|XP_006491705.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like isoform X1 [Citrus sinensis]
           gi|568877358|ref|XP_006491706.1| PREDICTED: putative
           pentatricopeptide repeat-containing protein
           At3g23330-like isoform X2 [Citrus sinensis]
          Length = 783

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 31/80 (38%), Positives = 45/80 (56%)
 Frame = -2

Query: 243 TCHQTLVRTYLENQGLIRTKAHAKQLHAQVIRTIGPVTATVXXXXXXXXXXXXXLKESLT 64
           T  +TL+   L+N   I+TK+ AKQLHAQ+ +T+ P +  +             + +SL 
Sbjct: 2   TSTKTLINL-LKNPVSIKTKSQAKQLHAQIFKTLEPNSRFLISRLLFIYNNFNLVHDSLC 60

Query: 63  LFDTLDSPKPTKAWKSIIKC 4
           L DTL +P P   WKSII+C
Sbjct: 61  LLDTLKTPAPPVTWKSIIRC 80


>ref|XP_006428361.1| hypothetical protein CICLE_v10013800mg [Citrus clementina]
           gi|557530418|gb|ESR41601.1| hypothetical protein
           CICLE_v10013800mg [Citrus clementina]
          Length = 680

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 31/80 (38%), Positives = 45/80 (56%)
 Frame = -2

Query: 243 TCHQTLVRTYLENQGLIRTKAHAKQLHAQVIRTIGPVTATVXXXXXXXXXXXXXLKESLT 64
           T  +TL+   L+N   I+TK+ AKQLHAQ+ +T+ P +  +             + +SL 
Sbjct: 2   TSTKTLINL-LKNPVSIKTKSQAKQLHAQIFKTLEPNSRFLISRLLFIYNNFNLVHDSLC 60

Query: 63  LFDTLDSPKPTKAWKSIIKC 4
           L DTL +P P   WKSII+C
Sbjct: 61  LLDTLKTPAPPVTWKSIIRC 80


>ref|XP_006406039.1| hypothetical protein EUTSA_v10020184mg [Eutrema salsugineum]
           gi|557107185|gb|ESQ47492.1| hypothetical protein
           EUTSA_v10020184mg [Eutrema salsugineum]
          Length = 694

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 33/78 (42%), Positives = 47/78 (60%)
 Frame = -2

Query: 234 QTLVRTYLENQGLIRTKAHAKQLHAQVIRTIGPVTATVXXXXXXXXXXXXXLKESLTLFD 55
           +TL++T ++N   IR+K  AKQLHAQ +RT   ++ T              L E+L LF 
Sbjct: 5   KTLIKTLIKNPTRIRSKYQAKQLHAQFLRT-QSLSHTSASIVISIYTNLKLLHEALLLFH 63

Query: 54  TLDSPKPTKAWKSIIKCY 1
           TL+SP P  AWKS+I+C+
Sbjct: 64  TLESP-PVLAWKSVIRCF 80


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