BLASTX nr result
ID: Catharanthus22_contig00020227
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00020227
(1216 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABD33152.1| Helicase, C-terminal; Haem peroxidase, plant/fung... 82 6e-13
ref|XP_003624531.1| Transcription-repair-coupling factor [Medica... 82 6e-13
ref|XP_004493106.1| PREDICTED: transcription-repair-coupling fac... 81 1e-12
ref|XP_006844670.1| hypothetical protein AMTR_s00016p00242110 [A... 80 2e-12
ref|XP_006408576.1| hypothetical protein EUTSA_v10020076mg [Eutr... 78 6e-12
ref|XP_006408575.1| hypothetical protein EUTSA_v10020076mg [Eutr... 78 6e-12
gb|EOY02994.1| DEAD/DEAH box helicase [Theobroma cacao] 78 6e-12
dbj|BAJ34179.1| unnamed protein product [Thellungiella halophila] 78 6e-12
ref|XP_004231740.1| PREDICTED: transcription-repair-coupling fac... 78 8e-12
ref|XP_006338749.1| PREDICTED: uncharacterized protein LOC102592... 77 1e-11
ref|XP_004306326.1| PREDICTED: transcription-repair-coupling fac... 77 1e-11
ref|XP_002302957.2| hypothetical protein POPTR_0002s23840g [Popu... 77 2e-11
ref|XP_002303013.2| DEAD/DEAH box helicase family protein [Popul... 77 2e-11
emb|CBI21248.3| unnamed protein product [Vitis vinifera] 76 2e-11
ref|XP_002276313.1| PREDICTED: transcription-repair-coupling fac... 76 2e-11
gb|EXB41421.1| Transcription-repair-coupling factor [Morus notab... 76 3e-11
ref|XP_002320427.1| DEAD/DEAH box helicase family protein [Popul... 76 3e-11
gb|EMJ18845.1| hypothetical protein PRUPE_ppa001550mg [Prunus pe... 75 4e-11
ref|XP_006300243.1| hypothetical protein CARUB_v10016483mg [Caps... 75 5e-11
gb|AAN72199.1| putative helicase [Arabidopsis thaliana] 75 5e-11
>gb|ABD33152.1| Helicase, C-terminal; Haem peroxidase, plant/fungal/bacterial
[Medicago truncatula]
Length = 494
Score = 81.6 bits (200), Expect = 6e-13
Identities = 39/46 (84%), Positives = 43/46 (93%)
Frame = +2
Query: 755 KTKSKKEEYLHMIKRGDLDIIVGTHALLGNRVVYNNLGLLVVDEEQ 892
+T+S+KE YL MIK GDLDIIVGTH+LLGNRVVYNNLGLLVVDEEQ
Sbjct: 191 QTRSEKEAYLEMIKNGDLDIIVGTHSLLGNRVVYNNLGLLVVDEEQ 236
>ref|XP_003624531.1| Transcription-repair-coupling factor [Medicago truncatula]
gi|355499546|gb|AES80749.1|
Transcription-repair-coupling factor [Medicago
truncatula]
Length = 503
Score = 81.6 bits (200), Expect = 6e-13
Identities = 39/46 (84%), Positives = 43/46 (93%)
Frame = +2
Query: 755 KTKSKKEEYLHMIKRGDLDIIVGTHALLGNRVVYNNLGLLVVDEEQ 892
+T+S+KE YL MIK GDLDIIVGTH+LLGNRVVYNNLGLLVVDEEQ
Sbjct: 175 QTRSEKEAYLEMIKNGDLDIIVGTHSLLGNRVVYNNLGLLVVDEEQ 220
>ref|XP_004493106.1| PREDICTED: transcription-repair-coupling factor-like [Cicer
arietinum]
Length = 823
Score = 80.9 bits (198), Expect = 1e-12
Identities = 39/46 (84%), Positives = 43/46 (93%)
Frame = +2
Query: 755 KTKSKKEEYLHMIKRGDLDIIVGTHALLGNRVVYNNLGLLVVDEEQ 892
+T+S+KE YL MIK GDLDIIVGTH+LLGNRVVYNNLGLLVVDEEQ
Sbjct: 358 QTRSEKEGYLEMIKSGDLDIIVGTHSLLGNRVVYNNLGLLVVDEEQ 403
>ref|XP_006844670.1| hypothetical protein AMTR_s00016p00242110 [Amborella trichopoda]
gi|548847141|gb|ERN06345.1| hypothetical protein
AMTR_s00016p00242110 [Amborella trichopoda]
Length = 887
Score = 80.1 bits (196), Expect = 2e-12
Identities = 39/46 (84%), Positives = 44/46 (95%)
Frame = +2
Query: 755 KTKSKKEEYLHMIKRGDLDIIVGTHALLGNRVVYNNLGLLVVDEEQ 892
+TK++KEEY+ MIK+G LDIIVGTHALLGNRVVYNNLGLLVVDEEQ
Sbjct: 422 QTKTEKEEYIAMIKQGLLDIIVGTHALLGNRVVYNNLGLLVVDEEQ 467
>ref|XP_006408576.1| hypothetical protein EUTSA_v10020076mg [Eutrema salsugineum]
gi|567204573|ref|XP_006408577.1| hypothetical protein
EUTSA_v10020076mg [Eutrema salsugineum]
gi|557109722|gb|ESQ50029.1| hypothetical protein
EUTSA_v10020076mg [Eutrema salsugineum]
gi|557109723|gb|ESQ50030.1| hypothetical protein
EUTSA_v10020076mg [Eutrema salsugineum]
Length = 823
Score = 78.2 bits (191), Expect = 6e-12
Identities = 37/46 (80%), Positives = 44/46 (95%)
Frame = +2
Query: 755 KTKSKKEEYLHMIKRGDLDIIVGTHALLGNRVVYNNLGLLVVDEEQ 892
+TK++KEEYL MIK GDL+IIVGTH+LLG+RVVY+NLGLLVVDEEQ
Sbjct: 358 QTKAEKEEYLEMIKNGDLNIIVGTHSLLGSRVVYSNLGLLVVDEEQ 403
>ref|XP_006408575.1| hypothetical protein EUTSA_v10020076mg [Eutrema salsugineum]
gi|557109721|gb|ESQ50028.1| hypothetical protein
EUTSA_v10020076mg [Eutrema salsugineum]
Length = 801
Score = 78.2 bits (191), Expect = 6e-12
Identities = 37/46 (80%), Positives = 44/46 (95%)
Frame = +2
Query: 755 KTKSKKEEYLHMIKRGDLDIIVGTHALLGNRVVYNNLGLLVVDEEQ 892
+TK++KEEYL MIK GDL+IIVGTH+LLG+RVVY+NLGLLVVDEEQ
Sbjct: 358 QTKAEKEEYLEMIKNGDLNIIVGTHSLLGSRVVYSNLGLLVVDEEQ 403
>gb|EOY02994.1| DEAD/DEAH box helicase [Theobroma cacao]
Length = 1251
Score = 78.2 bits (191), Expect = 6e-12
Identities = 37/46 (80%), Positives = 45/46 (97%)
Frame = +2
Query: 755 KTKSKKEEYLHMIKRGDLDIIVGTHALLGNRVVYNNLGLLVVDEEQ 892
+TK++KEE+L+MIK+GDL IIVGTH+LLG+RVVYNNLGLLVVDEEQ
Sbjct: 370 QTKAEKEEHLNMIKKGDLAIIVGTHSLLGSRVVYNNLGLLVVDEEQ 415
>dbj|BAJ34179.1| unnamed protein product [Thellungiella halophila]
Length = 823
Score = 78.2 bits (191), Expect = 6e-12
Identities = 37/46 (80%), Positives = 44/46 (95%)
Frame = +2
Query: 755 KTKSKKEEYLHMIKRGDLDIIVGTHALLGNRVVYNNLGLLVVDEEQ 892
+TK++KEEYL MIK GDL+IIVGTH+LLG+RVVY+NLGLLVVDEEQ
Sbjct: 358 QTKAEKEEYLEMIKNGDLNIIVGTHSLLGSRVVYSNLGLLVVDEEQ 403
>ref|XP_004231740.1| PREDICTED: transcription-repair-coupling factor-like [Solanum
lycopersicum]
Length = 826
Score = 77.8 bits (190), Expect = 8e-12
Identities = 38/46 (82%), Positives = 42/46 (91%)
Frame = +2
Query: 755 KTKSKKEEYLHMIKRGDLDIIVGTHALLGNRVVYNNLGLLVVDEEQ 892
+TKS+KEEYL MIK G +DIIVGTH+LLGNRV YNNLGLLVVDEEQ
Sbjct: 361 QTKSEKEEYLSMIKDGHVDIIVGTHSLLGNRVEYNNLGLLVVDEEQ 406
>ref|XP_006338749.1| PREDICTED: uncharacterized protein LOC102592949 [Solanum tuberosum]
Length = 825
Score = 77.4 bits (189), Expect = 1e-11
Identities = 38/46 (82%), Positives = 42/46 (91%)
Frame = +2
Query: 755 KTKSKKEEYLHMIKRGDLDIIVGTHALLGNRVVYNNLGLLVVDEEQ 892
+TKS+KEEYL MIK G +DIIVGTH+LLGNRV YNNLGLLVVDEEQ
Sbjct: 360 QTKSEKEEYLSMIKDGRVDIIVGTHSLLGNRVEYNNLGLLVVDEEQ 405
>ref|XP_004306326.1| PREDICTED: transcription-repair-coupling factor-like [Fragaria
vesca subsp. vesca]
Length = 800
Score = 77.0 bits (188), Expect = 1e-11
Identities = 37/46 (80%), Positives = 43/46 (93%)
Frame = +2
Query: 755 KTKSKKEEYLHMIKRGDLDIIVGTHALLGNRVVYNNLGLLVVDEEQ 892
+TKS+K+E+L MIK G LDIIVGTH+LLG+RVVYNNLGLLVVDEEQ
Sbjct: 335 QTKSEKDEHLDMIKNGHLDIIVGTHSLLGSRVVYNNLGLLVVDEEQ 380
>ref|XP_002302957.2| hypothetical protein POPTR_0002s23840g [Populus trichocarpa]
gi|550345698|gb|EEE82230.2| hypothetical protein
POPTR_0002s23840g [Populus trichocarpa]
Length = 838
Score = 76.6 bits (187), Expect = 2e-11
Identities = 37/51 (72%), Positives = 44/51 (86%)
Frame = +2
Query: 749 ILKTKSKKEEYLHMIKRGDLDIIVGTHALLGNRVVYNNLGLLVVDEEQVCN 901
+L++K++KE YL M K G LDIIVGTH+LLG+RVVYNNLGLLVVDEEQ N
Sbjct: 358 LLQSKAEKEMYLEMTKHGHLDIIVGTHSLLGSRVVYNNLGLLVVDEEQTNN 408
>ref|XP_002303013.2| DEAD/DEAH box helicase family protein [Populus trichocarpa]
gi|550345697|gb|EEE82286.2| DEAD/DEAH box helicase
family protein [Populus trichocarpa]
Length = 939
Score = 76.6 bits (187), Expect = 2e-11
Identities = 37/51 (72%), Positives = 44/51 (86%)
Frame = +2
Query: 749 ILKTKSKKEEYLHMIKRGDLDIIVGTHALLGNRVVYNNLGLLVVDEEQVCN 901
+L++K++KE YL M K G LDIIVGTH+LLG+RVVYNNLGLLVVDEEQ N
Sbjct: 358 LLQSKAEKEMYLEMTKHGHLDIIVGTHSLLGSRVVYNNLGLLVVDEEQTNN 408
>emb|CBI21248.3| unnamed protein product [Vitis vinifera]
Length = 640
Score = 76.3 bits (186), Expect = 2e-11
Identities = 36/46 (78%), Positives = 43/46 (93%)
Frame = +2
Query: 755 KTKSKKEEYLHMIKRGDLDIIVGTHALLGNRVVYNNLGLLVVDEEQ 892
+T ++KE++L MIK GDLDIIVGTH+LLGNRVVY+NLGLLVVDEEQ
Sbjct: 175 QTTAEKEKHLRMIKHGDLDIIVGTHSLLGNRVVYSNLGLLVVDEEQ 220
>ref|XP_002276313.1| PREDICTED: transcription-repair-coupling factor-like [Vitis
vinifera]
Length = 823
Score = 76.3 bits (186), Expect = 2e-11
Identities = 36/46 (78%), Positives = 43/46 (93%)
Frame = +2
Query: 755 KTKSKKEEYLHMIKRGDLDIIVGTHALLGNRVVYNNLGLLVVDEEQ 892
+T ++KE++L MIK GDLDIIVGTH+LLGNRVVY+NLGLLVVDEEQ
Sbjct: 358 QTTAEKEKHLRMIKHGDLDIIVGTHSLLGNRVVYSNLGLLVVDEEQ 403
>gb|EXB41421.1| Transcription-repair-coupling factor [Morus notabilis]
Length = 816
Score = 75.9 bits (185), Expect = 3e-11
Identities = 36/46 (78%), Positives = 43/46 (93%)
Frame = +2
Query: 755 KTKSKKEEYLHMIKRGDLDIIVGTHALLGNRVVYNNLGLLVVDEEQ 892
+T+++KEE+L MIK G LDIIVGTH+LLG+RVVYNNLGLLVVDEEQ
Sbjct: 379 QTRAEKEEHLDMIKNGHLDIIVGTHSLLGSRVVYNNLGLLVVDEEQ 424
>ref|XP_002320427.1| DEAD/DEAH box helicase family protein [Populus trichocarpa]
gi|222861200|gb|EEE98742.1| DEAD/DEAH box helicase
family protein [Populus trichocarpa]
Length = 817
Score = 75.9 bits (185), Expect = 3e-11
Identities = 36/46 (78%), Positives = 43/46 (93%)
Frame = +2
Query: 755 KTKSKKEEYLHMIKRGDLDIIVGTHALLGNRVVYNNLGLLVVDEEQ 892
++K++KE YL+MI+ G LDIIVGTH+LLGNRVVYNNLGLLVVDEEQ
Sbjct: 352 QSKAEKEMYLNMIEHGHLDIIVGTHSLLGNRVVYNNLGLLVVDEEQ 397
>gb|EMJ18845.1| hypothetical protein PRUPE_ppa001550mg [Prunus persica]
Length = 804
Score = 75.5 bits (184), Expect = 4e-11
Identities = 36/46 (78%), Positives = 43/46 (93%)
Frame = +2
Query: 755 KTKSKKEEYLHMIKRGDLDIIVGTHALLGNRVVYNNLGLLVVDEEQ 892
+T+++KEE+L MIK G LDIIVGTH+LLG+RVVYNNLGLLVVDEEQ
Sbjct: 339 QTRAEKEEHLDMIKNGRLDIIVGTHSLLGSRVVYNNLGLLVVDEEQ 384
>ref|XP_006300243.1| hypothetical protein CARUB_v10016483mg [Capsella rubella]
gi|482568952|gb|EOA33141.1| hypothetical protein
CARUB_v10016483mg [Capsella rubella]
Length = 828
Score = 75.1 bits (183), Expect = 5e-11
Identities = 36/46 (78%), Positives = 43/46 (93%)
Frame = +2
Query: 755 KTKSKKEEYLHMIKRGDLDIIVGTHALLGNRVVYNNLGLLVVDEEQ 892
+TK++KEEYL MIK G L+IIVGTH+LLG+RVVY+NLGLLVVDEEQ
Sbjct: 363 QTKAEKEEYLEMIKSGHLNIIVGTHSLLGSRVVYSNLGLLVVDEEQ 408
>gb|AAN72199.1| putative helicase [Arabidopsis thaliana]
Length = 822
Score = 75.1 bits (183), Expect = 5e-11
Identities = 36/46 (78%), Positives = 43/46 (93%)
Frame = +2
Query: 755 KTKSKKEEYLHMIKRGDLDIIVGTHALLGNRVVYNNLGLLVVDEEQ 892
+TK++KEEYL MIK G L+IIVGTH+LLG+RVVY+NLGLLVVDEEQ
Sbjct: 357 QTKAEKEEYLEMIKTGHLNIIVGTHSLLGSRVVYSNLGLLVVDEEQ 402