BLASTX nr result

ID: Catharanthus22_contig00020101 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00020101
         (239 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN77247.1| hypothetical protein VITISV_021658 [Vitis vinifera]    50   1e-07
emb|CAN73690.1| hypothetical protein VITISV_034834 [Vitis vinifera]    47   2e-07
ref|XP_006494982.1| PREDICTED: uncharacterized protein LOC102624...    49   6e-07
gb|ADP20180.1| mutant gag-pol polyprotein [Pisum sativum]              45   1e-05

>emb|CAN77247.1| hypothetical protein VITISV_021658 [Vitis vinifera]
          Length = 1323

 Score = 50.1 bits (118), Expect(2) = 1e-07
 Identities = 24/35 (68%), Positives = 29/35 (82%)
 Frame = +3

Query: 3   EMKVSKQVKVLFSIGRNEDEVSCDIVPMYMTHIVL 107
           E+KV+KQV V FSIGR +DEV CDIVPM+  HI+L
Sbjct: 447 EVKVNKQVLVSFSIGRYKDEVLCDIVPMHAGHILL 481



 Score = 31.2 bits (69), Expect(2) = 1e-07
 Identities = 14/22 (63%), Positives = 16/22 (72%)
 Frame = +2

Query: 104 IGRP*LFDRKVMCDRYKNSYSF 169
           +GRP  FDRKV  D +KN YSF
Sbjct: 481 LGRPWQFDRKVNHDGFKNRYSF 502


>emb|CAN73690.1| hypothetical protein VITISV_034834 [Vitis vinifera]
          Length = 818

 Score = 47.4 bits (111), Expect(2) = 2e-07
 Identities = 23/35 (65%), Positives = 28/35 (80%)
 Frame = +3

Query: 3   EMKVSKQVKVLFSIGRNEDEVSCDIVPMYMTHIVL 107
           E KV+K+V V FSIGR +DEV CDIVPM+  HI+L
Sbjct: 469 EDKVNKEVLVSFSIGRYKDEVLCDIVPMHAGHILL 503



 Score = 33.5 bits (75), Expect(2) = 2e-07
 Identities = 16/25 (64%), Positives = 18/25 (72%)
 Frame = +2

Query: 104 IGRP*LFDRKVMCDRYKNSYSFI*N 178
           +GRP  FDRKV  D +KN YSFI N
Sbjct: 503 LGRPWQFDRKVNHDGFKNRYSFIKN 527


>ref|XP_006494982.1| PREDICTED: uncharacterized protein LOC102624489 [Citrus sinensis]
          Length = 1083

 Score = 48.5 bits (114), Expect(2) = 6e-07
 Identities = 22/35 (62%), Positives = 29/35 (82%)
 Frame = +3

Query: 3   EMKVSKQVKVLFSIGRNEDEVSCDIVPMYMTHIVL 107
           E+KV+KQV V FSIGR +D+V CD+VPM+  HI+L
Sbjct: 286 EVKVNKQVLVSFSIGRYKDDVLCDVVPMHAGHILL 320



 Score = 30.4 bits (67), Expect(2) = 6e-07
 Identities = 13/26 (50%), Positives = 18/26 (69%)
 Frame = +2

Query: 104 IGRP*LFDRKVMCDRYKNSYSFI*NE 181
           +GRP  +DR+V  D Y N YSF+ N+
Sbjct: 320 LGRPWQYDRRVTHDGYLNRYSFVINK 345


>gb|ADP20180.1| mutant gag-pol polyprotein [Pisum sativum]
          Length = 1004

 Score = 44.7 bits (104), Expect(2) = 1e-05
 Identities = 19/35 (54%), Positives = 27/35 (77%)
 Frame = +3

Query: 3   EMKVSKQVKVLFSIGRNEDEVSCDIVPMYMTHIVL 107
           EM V+KQV++ F IG+ ED V CD+VPM  +H++L
Sbjct: 419 EMLVNKQVEICFKIGKYEDVVLCDVVPMEASHLLL 453



 Score = 30.0 bits (66), Expect(2) = 1e-05
 Identities = 13/23 (56%), Positives = 15/23 (65%)
 Frame = +2

Query: 104 IGRP*LFDRKVMCDRYKNSYSFI 172
           +GRP  FDRK   D Y N YSF+
Sbjct: 453 LGRPWQFDRKANHDGYSNKYSFM 475


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