BLASTX nr result
ID: Catharanthus22_contig00020101
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Catharanthus22_contig00020101 (239 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN77247.1| hypothetical protein VITISV_021658 [Vitis vinifera] 50 1e-07 emb|CAN73690.1| hypothetical protein VITISV_034834 [Vitis vinifera] 47 2e-07 ref|XP_006494982.1| PREDICTED: uncharacterized protein LOC102624... 49 6e-07 gb|ADP20180.1| mutant gag-pol polyprotein [Pisum sativum] 45 1e-05 >emb|CAN77247.1| hypothetical protein VITISV_021658 [Vitis vinifera] Length = 1323 Score = 50.1 bits (118), Expect(2) = 1e-07 Identities = 24/35 (68%), Positives = 29/35 (82%) Frame = +3 Query: 3 EMKVSKQVKVLFSIGRNEDEVSCDIVPMYMTHIVL 107 E+KV+KQV V FSIGR +DEV CDIVPM+ HI+L Sbjct: 447 EVKVNKQVLVSFSIGRYKDEVLCDIVPMHAGHILL 481 Score = 31.2 bits (69), Expect(2) = 1e-07 Identities = 14/22 (63%), Positives = 16/22 (72%) Frame = +2 Query: 104 IGRP*LFDRKVMCDRYKNSYSF 169 +GRP FDRKV D +KN YSF Sbjct: 481 LGRPWQFDRKVNHDGFKNRYSF 502 >emb|CAN73690.1| hypothetical protein VITISV_034834 [Vitis vinifera] Length = 818 Score = 47.4 bits (111), Expect(2) = 2e-07 Identities = 23/35 (65%), Positives = 28/35 (80%) Frame = +3 Query: 3 EMKVSKQVKVLFSIGRNEDEVSCDIVPMYMTHIVL 107 E KV+K+V V FSIGR +DEV CDIVPM+ HI+L Sbjct: 469 EDKVNKEVLVSFSIGRYKDEVLCDIVPMHAGHILL 503 Score = 33.5 bits (75), Expect(2) = 2e-07 Identities = 16/25 (64%), Positives = 18/25 (72%) Frame = +2 Query: 104 IGRP*LFDRKVMCDRYKNSYSFI*N 178 +GRP FDRKV D +KN YSFI N Sbjct: 503 LGRPWQFDRKVNHDGFKNRYSFIKN 527 >ref|XP_006494982.1| PREDICTED: uncharacterized protein LOC102624489 [Citrus sinensis] Length = 1083 Score = 48.5 bits (114), Expect(2) = 6e-07 Identities = 22/35 (62%), Positives = 29/35 (82%) Frame = +3 Query: 3 EMKVSKQVKVLFSIGRNEDEVSCDIVPMYMTHIVL 107 E+KV+KQV V FSIGR +D+V CD+VPM+ HI+L Sbjct: 286 EVKVNKQVLVSFSIGRYKDDVLCDVVPMHAGHILL 320 Score = 30.4 bits (67), Expect(2) = 6e-07 Identities = 13/26 (50%), Positives = 18/26 (69%) Frame = +2 Query: 104 IGRP*LFDRKVMCDRYKNSYSFI*NE 181 +GRP +DR+V D Y N YSF+ N+ Sbjct: 320 LGRPWQYDRRVTHDGYLNRYSFVINK 345 >gb|ADP20180.1| mutant gag-pol polyprotein [Pisum sativum] Length = 1004 Score = 44.7 bits (104), Expect(2) = 1e-05 Identities = 19/35 (54%), Positives = 27/35 (77%) Frame = +3 Query: 3 EMKVSKQVKVLFSIGRNEDEVSCDIVPMYMTHIVL 107 EM V+KQV++ F IG+ ED V CD+VPM +H++L Sbjct: 419 EMLVNKQVEICFKIGKYEDVVLCDVVPMEASHLLL 453 Score = 30.0 bits (66), Expect(2) = 1e-05 Identities = 13/23 (56%), Positives = 15/23 (65%) Frame = +2 Query: 104 IGRP*LFDRKVMCDRYKNSYSFI 172 +GRP FDRK D Y N YSF+ Sbjct: 453 LGRPWQFDRKANHDGYSNKYSFM 475