BLASTX nr result

ID: Catharanthus22_contig00019651 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00019651
         (2292 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278166.1| PREDICTED: pentatricopeptide repeat-containi...   781   0.0  
gb|EOX94157.1| Pentatricopeptide repeat-containing protein, puta...   743   0.0  
gb|EMJ28376.1| hypothetical protein PRUPE_ppa020455mg [Prunus pe...   742   0.0  
emb|CAN82226.1| hypothetical protein VITISV_011875 [Vitis vinifera]   736   0.0  
gb|EXB73287.1| hypothetical protein L484_009366 [Morus notabilis]     733   0.0  
ref|XP_004137884.1| PREDICTED: pentatricopeptide repeat-containi...   712   0.0  
ref|XP_004301045.1| PREDICTED: pentatricopeptide repeat-containi...   708   0.0  
ref|XP_002303738.2| hypothetical protein POPTR_0003s15840g, part...   559   e-157
ref|XP_006423843.1| hypothetical protein CICLE_v10029811mg [Citr...   454   e-125
ref|XP_004160350.1| PREDICTED: pentatricopeptide repeat-containi...   443   e-121
gb|EOY27956.1| Pentatricopeptide, putative [Theobroma cacao]          441   e-121
ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containi...   439   e-120
gb|EMJ15466.1| hypothetical protein PRUPE_ppa025121mg [Prunus pe...   437   e-119
gb|EXB84044.1| hypothetical protein L484_005808 [Morus notabilis]     429   e-117
ref|XP_002512699.1| pentatricopeptide repeat-containing protein,...   426   e-116
ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containi...   424   e-115
ref|XP_006467621.1| PREDICTED: pentatricopeptide repeat-containi...   423   e-115
ref|XP_004294643.1| PREDICTED: pentatricopeptide repeat-containi...   422   e-115
gb|ABR17838.1| unknown [Picea sitchensis]                             422   e-115
gb|AHB18405.1| pentatricopeptide repeat-containing protein [Goss...   422   e-115

>ref|XP_002278166.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
            chloroplastic-like [Vitis vinifera]
          Length = 662

 Score =  781 bits (2016), Expect = 0.0
 Identities = 376/621 (60%), Positives = 481/621 (77%)
 Frame = +2

Query: 350  THHLFEGIPLKDTFAWNNLIQTYLSNGEPTHVTSVYQRMLLLGAKPDRRTLPRVLAASRI 529
            TH LF+ IP+ +TFAWNNLIQT+L+NG+   V S Y++MLL G +PD+ T+PR+L A+R 
Sbjct: 46   THQLFDEIPVSNTFAWNNLIQTHLTNGDSDRVVSTYRQMLLRGVRPDKHTIPRILTAARH 105

Query: 530  LRNLSLGKQLHSHVIKFGFSSDAYVTSSLLELYGQLDGIDAAKRYFENARFDKNNAVTWT 709
              + S GKQ+H H +K G SS++YV S+LLE+YG+LDG +AAK  F   +  + N+V+WT
Sbjct: 106  TSSFSFGKQVHGHALKLGLSSESYVISALLEMYGRLDGANAAKLVF--CKSARRNSVSWT 163

Query: 710  LLARMYVKSSEPQSAIDLFFEMIEHIGNAIDAVAFVTVISACGMLKSLREGRRIHQIVKD 889
            L++R+Y+   +P  A+D+F +M+E   + ID +A VT I ACGMLKSL+EGR +H+I K 
Sbjct: 164  LISRLYIMEDKPGLAVDMFKQMVES-KSEIDPLALVTAIVACGMLKSLQEGRYVHEIAKK 222

Query: 890  YGLESDVLVGNSLVKMYVDCGSVKDARVVFDSISCKDAISWTAIINGYVKKGGFNEGLKL 1069
             GLE+DVLV NSL+KMY+DCGS+KDAR VFD +  KD ISWT I  GYVK GGFNEGLKL
Sbjct: 223  CGLEADVLVSNSLLKMYIDCGSIKDARAVFDRMPSKDVISWTEIFRGYVKNGGFNEGLKL 282

Query: 1070 FRLMSKNGIKADAFAISSVLPACARMAAHKNGKEIHGHLIRNGVELNTTVLNALMDMYNK 1249
            FR MS  G+K D+ AISS+LPAC R AAHK GKEIH +L+RNG++LN TV NA++DMY K
Sbjct: 283  FRQMSMEGVKPDSLAISSILPACGRGAAHKQGKEIHAYLLRNGIDLNVTVQNAVLDMYVK 342

Query: 1250 SGSIEYASRIFSRMKDKDLVSWTVMIVGYSLHGQGNLGVQLFREMFDKSNVEVDEMILSS 1429
            SG IE A++IF+ MKD+D +SWTVMI+GYSLHGQG LGV LFR+M   S+VE+D++  ++
Sbjct: 343  SGFIESAAKIFAGMKDRDAISWTVMILGYSLHGQGELGVDLFRKMEKNSSVEIDQIAYAA 402

Query: 1430 VLYACHSSCMIDEGRYFFHLIRSPKVADCALMVSLLVRVGLFSEAKAFIEERKLARQREV 1609
             L+AC ++ ++++GR++F+ I +PK    ALMV+LL RVGLF EA+ F+EE KL    EV
Sbjct: 403  ALHACTTARLVEQGRFYFNCITAPKSRHYALMVALLSRVGLFDEARVFMEEHKLEGHVEV 462

Query: 1610 LRALLDGYRIHQNAHEGKRIIEQLCDLEPLKTENYIMLSNWYAHHKKWDMVDKLRETIQD 1789
            LRALLDG RIH N    KR+IEQLCDL+ L  +NY++LSNWY+   KWDMV++LRETI+D
Sbjct: 463  LRALLDGCRIHHNMRTAKRVIEQLCDLQTLNADNYVLLSNWYSSFAKWDMVNELRETIRD 522

Query: 1790 MGLTPKRAYSWIELRNKVHVFRTGDESHPISLIIHSEIQRLMKKIEEHGGFRITSDFSLH 1969
            MGL P++AYSWIE RNK+HVF TGD SHP S  I+ E+  LMKKIEE  G R+  DFSLH
Sbjct: 523  MGLKPRKAYSWIEFRNKIHVFGTGDVSHPRSEKIYWELHSLMKKIEEE-GTRLNLDFSLH 581

Query: 1970 DVDEERECPHTRHSELLAASFGLIYTKKGTTIRVTKNHRICRSCHDSVKAICRVVDREII 2149
            DVDEEREC    HSELLA SFGLI T+ G TIRVTKN R+C +CHDS KAI ++V+REII
Sbjct: 582  DVDEERECVPIGHSELLATSFGLISTQAGATIRVTKNLRMCGNCHDSAKAISKIVEREII 641

Query: 2150 IRDPSDFHHFRDGICSCGDYW 2212
            I+DPS FHHF+DG CSCGD+W
Sbjct: 642  IKDPSCFHHFKDGFCSCGDFW 662


>gb|EOX94157.1| Pentatricopeptide repeat-containing protein, putative [Theobroma
            cacao]
          Length = 656

 Score =  743 bits (1918), Expect = 0.0
 Identities = 361/623 (57%), Positives = 469/623 (75%), Gaps = 2/623 (0%)
 Frame = +2

Query: 350  THHLFEGIPLK--DTFAWNNLIQTYLSNGEPTHVTSVYQRMLLLGAKPDRRTLPRVLAAS 523
            TH L   IPL   +TFAWN LIQT+LSN +   V SVY  M+L G +PD+ TLPRVL AS
Sbjct: 38   THQLVLEIPLSTSNTFAWNQLIQTHLSNKQLQQVLSVYHGMMLRGVRPDKHTLPRVLTAS 97

Query: 524  RILRNLSLGKQLHSHVIKFGFSSDAYVTSSLLELYGQLDGIDAAKRYFENARFDKNNAVT 703
            R+  NL+ GKQ+H+H  K GFSSD YV ++L+E+YG+L G+DAAK   +NA     N+V 
Sbjct: 98   RLCTNLAFGKQVHAHAFKLGFSSDLYVITALMEMYGRLHGVDAAKWVLDNA--PTTNSVA 155

Query: 704  WTLLARMYVKSSEPQSAIDLFFEMIEHIGNAIDAVAFVTVISACGMLKSLREGRRIHQIV 883
            WT+LA++++  ++P  A ++F +M+  +   ID V   T I AC +LKSL++ R  HQI 
Sbjct: 156  WTILAKLHLIDNKPHLAFEIFDQMLR-LKADIDPVGLATAIGACSLLKSLQQARNAHQIA 214

Query: 884  KDYGLESDVLVGNSLVKMYVDCGSVKDARVVFDSISCKDAISWTAIINGYVKKGGFNEGL 1063
            +D G E  +L+GNSL+KMY+DC S+++AR  FD++  KD ISWT +I GYVKKGG+NEGL
Sbjct: 215  RDCGFEFHLLIGNSLLKMYIDCDSLEEARSFFDAMPSKDVISWTEMIRGYVKKGGYNEGL 274

Query: 1064 KLFRLMSKNGIKADAFAISSVLPACARMAAHKNGKEIHGHLIRNGVELNTTVLNALMDMY 1243
            KLFR M + GIK D+  ISS+LPACAR+ AHK GKE+H +L RNG++LN TV NA+MDMY
Sbjct: 275  KLFRRMIRAGIKPDSLTISSILPACARVPAHKQGKELHAYLFRNGIDLNLTVQNAIMDMY 334

Query: 1244 NKSGSIEYASRIFSRMKDKDLVSWTVMIVGYSLHGQGNLGVQLFREMFDKSNVEVDEMIL 1423
             KSG IE AS +F  M ++D+VSWT+MI+GYSLHGQG  G+ LF EM  +S++E+DE   
Sbjct: 335  VKSGFIELASTVFMCMMERDIVSWTIMILGYSLHGQGGRGLDLFFEMEKESSLEIDEFTY 394

Query: 1424 SSVLYACHSSCMIDEGRYFFHLIRSPKVADCALMVSLLVRVGLFSEAKAFIEERKLARQR 1603
            ++VL+AC ++C +D G ++F+ I++P V  CALMV+LL R GLF+EA AFIEE ++    
Sbjct: 395  AAVLHACVTACRVDVGMFYFNRIQAPTVIHCALMVALLARAGLFNEAWAFIEEHQIVNDA 454

Query: 1604 EVLRALLDGYRIHQNAHEGKRIIEQLCDLEPLKTENYIMLSNWYAHHKKWDMVDKLRETI 1783
            EVLRALLDG RIHQ    GK+I+EQLC+LEPL  ENY++LSNWYA + KWDMVDKL+ TI
Sbjct: 455  EVLRALLDGCRIHQQLKIGKQIVEQLCELEPLNAENYVLLSNWYADNAKWDMVDKLKITI 514

Query: 1784 QDMGLTPKRAYSWIELRNKVHVFRTGDESHPISLIIHSEIQRLMKKIEEHGGFRITSDFS 1963
            +DMGL PKRAYSWIE RNK+HVF TGD SHP S I++ ++Q LMKK+E+ G  R +S FS
Sbjct: 515  RDMGLKPKRAYSWIEFRNKIHVFGTGDVSHPRSEIVYCQLQHLMKKMEDEGR-RPSSVFS 573

Query: 1964 LHDVDEERECPHTRHSELLAASFGLIYTKKGTTIRVTKNHRICRSCHDSVKAICRVVDRE 2143
            LHDVDEEREC H  HSE+LA SFGLI T+   TIRVTKN R+CRSCHD+ K I ++V+R+
Sbjct: 574  LHDVDEERECIHIGHSEMLAISFGLISTQGRETIRVTKNLRVCRSCHDTAKVISKIVERK 633

Query: 2144 IIIRDPSDFHHFRDGICSCGDYW 2212
            III+DP+ FHH +DG+C CGD W
Sbjct: 634  IIIKDPNCFHHIQDGVCLCGDLW 656


>gb|EMJ28376.1| hypothetical protein PRUPE_ppa020455mg [Prunus persica]
          Length = 654

 Score =  742 bits (1916), Expect = 0.0
 Identities = 365/621 (58%), Positives = 472/621 (76%)
 Frame = +2

Query: 350  THHLFEGIPLKDTFAWNNLIQTYLSNGEPTHVTSVYQRMLLLGAKPDRRTLPRVLAASRI 529
            T  L E +P  DTFAWN LIQT+++N    +  S Y +MLL G +PDR TLPR+L+ASR+
Sbjct: 39   TRKLLEKMPHSDTFAWNKLIQTHIANAHFDNALSTYHQMLLRGVRPDRHTLPRILSASRL 98

Query: 530  LRNLSLGKQLHSHVIKFGFSSDAYVTSSLLELYGQLDGIDAAKRYFENARFDKNNAVTWT 709
              +L LGKQLH H +K G S D YV ++L+ELYG+L  +DAAK  F+ +     ++V+WT
Sbjct: 99   SVDLPLGKQLHGHALKLGCSDDRYVVAALIELYGRLHSVDAAKGLFDKSPV--KDSVSWT 156

Query: 710  LLARMYVKSSEPQSAIDLFFEMIEHIGNAIDAVAFVTVISACGMLKSLREGRRIHQIVKD 889
            +LAR+Y+   +P  A+ +F  M+E  G  ID VA  T   ACGMLKS+ +G+++H++ K+
Sbjct: 157  MLARLYIMEGKPGMALHVFDGMVES-GAQIDPVALATAAGACGMLKSVIDGKKVHRVAKE 215

Query: 890  YGLESDVLVGNSLVKMYVDCGSVKDARVVFDSISCKDAISWTAIINGYVKKGGFNEGLKL 1069
             GLE DVLV N+L+KMY+DCG V DA  VFD +  KD ISWT +I+  VK+GGFNEGLKL
Sbjct: 216  RGLEFDVLVSNTLLKMYMDCGCVDDAWSVFDQMPSKDVISWTGMIHANVKRGGFNEGLKL 275

Query: 1070 FRLMSKNGIKADAFAISSVLPACARMAAHKNGKEIHGHLIRNGVELNTTVLNALMDMYNK 1249
            FR M  +G K D+ ++SSVLPACARM+A K GKEIHG+LIRNG+ +N TVLNALMDMY K
Sbjct: 276  FRQMIADGAKPDSLSVSSVLPACARMSASKQGKEIHGYLIRNGIRMNLTVLNALMDMYVK 335

Query: 1250 SGSIEYASRIFSRMKDKDLVSWTVMIVGYSLHGQGNLGVQLFREMFDKSNVEVDEMILSS 1429
            SG IE AS+IF+ +KDKD+VSWTVMI+GYSLHGQG LGV LFR+M D S++++DE   ++
Sbjct: 336  SGFIESASKIFAGLKDKDVVSWTVMILGYSLHGQGQLGVNLFRQMED-SSIQIDEFTYAA 394

Query: 1430 VLYACHSSCMIDEGRYFFHLIRSPKVADCALMVSLLVRVGLFSEAKAFIEERKLARQREV 1609
            VL AC ++ M++EG+++F+ I++P VA   L+V+LL R GLF +AK FI ++K+    EV
Sbjct: 395  VLRACVAALMVEEGKFYFNCIKTPAVAHSVLLVTLLSRYGLFDDAKNFIADKKIEGDAEV 454

Query: 1610 LRALLDGYRIHQNAHEGKRIIEQLCDLEPLKTENYIMLSNWYAHHKKWDMVDKLRETIQD 1789
            LRALLDG RIHQ +  GKR+IEQLCDLEPL  +NY++LSNWYAH+ KWDMV+ LR TI D
Sbjct: 455  LRALLDGCRIHQQSKLGKRVIEQLCDLEPLNADNYVLLSNWYAHYAKWDMVEGLRGTIID 514

Query: 1790 MGLTPKRAYSWIELRNKVHVFRTGDESHPISLIIHSEIQRLMKKIEEHGGFRITSDFSLH 1969
            MGL  K+AY+W+ELRNKVHVF TGD SHP S  I+ E+Q LM+K+E+  G R  SDFS H
Sbjct: 515  MGLKTKKAYTWMELRNKVHVFGTGDVSHPRSQGIYWELQGLMQKMEDE-GHRRDSDFSFH 573

Query: 1970 DVDEERECPHTRHSELLAASFGLIYTKKGTTIRVTKNHRICRSCHDSVKAICRVVDREII 2149
            DVDEEREC    HSE+LA SFGLI T+ G+TIRVTKN R+CR+CHDS K I ++V REII
Sbjct: 574  DVDEERECIPIGHSEMLAISFGLISTQAGSTIRVTKNLRVCRNCHDSAKIISQMVGREII 633

Query: 2150 IRDPSDFHHFRDGICSCGDYW 2212
            ++DP+ FHHF+DG CSCGD+W
Sbjct: 634  LKDPNCFHHFKDGYCSCGDFW 654


>emb|CAN82226.1| hypothetical protein VITISV_011875 [Vitis vinifera]
          Length = 734

 Score =  736 bits (1899), Expect = 0.0
 Identities = 360/621 (57%), Positives = 461/621 (74%)
 Frame = +2

Query: 350  THHLFEGIPLKDTFAWNNLIQTYLSNGEPTHVTSVYQRMLLLGAKPDRRTLPRVLAASRI 529
            TH LF+ IP+ +TFAWNNLIQT+L+NG+   V S Y++MLL G +PD+ T+PR+L A+R 
Sbjct: 141  THQLFDEIPVSNTFAWNNLIQTHLTNGDSGRVVSTYRQMLLRGVRPDKHTIPRILTAARH 200

Query: 530  LRNLSLGKQLHSHVIKFGFSSDAYVTSSLLELYGQLDGIDAAKRYFENARFDKNNAVTWT 709
              + S GKQ+H H +K G SS++YV S+LLE+YG+LDG +AAK  F   +  + N+V+WT
Sbjct: 201  TSSFSFGKQVHGHALKLGLSSESYVISALLEMYGRLDGABAAKLVF--CKSARRNSVSWT 258

Query: 710  LLARMYVKSSEPQSAIDLFFEMIEHIGNAIDAVAFVTVISACGMLKSLREGRRIHQIVKD 889
            L++R+Y+   +P  A+D+F +M+E   + ID +A VT I ACGMLKSL  G         
Sbjct: 259  LISRLYIMEDKPGLAVDMFKQMVES-KSEIDPLALVTAIVACGMLKSLPGG--------- 308

Query: 890  YGLESDVLVGNSLVKMYVDCGSVKDARVVFDSISCKDAISWTAIINGYVKKGGFNEGLKL 1069
                          +MY+DCGS+KDAR VFD +  KD ISWT I  GYVK GGFNEGLKL
Sbjct: 309  --------------EMYIDCGSIKDARAVFDRMPSKDVISWTEIFRGYVKNGGFNEGLKL 354

Query: 1070 FRLMSKNGIKADAFAISSVLPACARMAAHKNGKEIHGHLIRNGVELNTTVLNALMDMYNK 1249
            FR MS  G+K D+ AISS+LPAC R AAHK GKEIH +L+RNG++LN TV NA++DMY K
Sbjct: 355  FRQMSMEGVKPDSLAISSILPACGRGAAHKQGKEIHAYLLRNGIDLNVTVQNAVLDMYVK 414

Query: 1250 SGSIEYASRIFSRMKDKDLVSWTVMIVGYSLHGQGNLGVQLFREMFDKSNVEVDEMILSS 1429
            SG IE A++IF+ MKD+D +SWTVMI+GYSLHGQG LGV LFR+M   S+VE+D++  ++
Sbjct: 415  SGFIESAAKIFAGMKDRDAISWTVMILGYSLHGQGELGVDLFRKMEKNSSVEIDQIAYAA 474

Query: 1430 VLYACHSSCMIDEGRYFFHLIRSPKVADCALMVSLLVRVGLFSEAKAFIEERKLARQREV 1609
             L+AC ++ ++++GR++F+ I +PK    ALMV+LL RVGLF EA+ F+EE KL    EV
Sbjct: 475  ALHACTTARLVEQGRFYFNCITAPKSRHYALMVALLSRVGLFDEARVFMEEHKLEGHVEV 534

Query: 1610 LRALLDGYRIHQNAHEGKRIIEQLCDLEPLKTENYIMLSNWYAHHKKWDMVDKLRETIQD 1789
            LRALLDG RIH N    KR+IEQLCDL+ L  +NY++LSNWY+   KWDMV++LRETI+D
Sbjct: 535  LRALLDGCRIHHNMRTAKRVIEQLCDLQTLNADNYVLLSNWYSSFAKWDMVNELRETIRD 594

Query: 1790 MGLTPKRAYSWIELRNKVHVFRTGDESHPISLIIHSEIQRLMKKIEEHGGFRITSDFSLH 1969
            MGL P++AYSWIE RNK+HVF TGD SHP S  I+ E+  LMKKIEE  G R+  DFSLH
Sbjct: 595  MGLKPRKAYSWIEFRNKIHVFGTGDVSHPRSEKIYWELHSLMKKIEEE-GTRLNLDFSLH 653

Query: 1970 DVDEERECPHTRHSELLAASFGLIYTKKGTTIRVTKNHRICRSCHDSVKAICRVVDREII 2149
            DVDEEREC    HSELLA SFGLI T+ G TIRVTKN R+C +CHDS KAI ++V+REII
Sbjct: 654  DVDEERECVPIGHSELLATSFGLISTQAGATIRVTKNLRMCGNCHDSAKAISKIVEREII 713

Query: 2150 IRDPSDFHHFRDGICSCGDYW 2212
            I+DPS FHHF+DG CSCGD+W
Sbjct: 714  IKDPSCFHHFKDGFCSCGDFW 734


>gb|EXB73287.1| hypothetical protein L484_009366 [Morus notabilis]
          Length = 676

 Score =  733 bits (1892), Expect = 0.0
 Identities = 373/670 (55%), Positives = 488/670 (72%), Gaps = 7/670 (1%)
 Frame = +2

Query: 224  HSFFSTFLESPTLFQNSGI-----ASNHYFSCCKCSSQMSDKLTQTKTHHLFEGIPLKDT 388
            H+ F     S T F    +      S H  S  + + + +D    +  H +F+ + L DT
Sbjct: 13   HNMFDEMPLSETTFPKRNLLHCKLGSRHLASNPRVALKSADL---SPAHKMFDEMSLSDT 69

Query: 389  FAWNNLIQTYLSNGEPTHVTSVYQRMLLLGAKPDRRTLPRVLAA-SRILRNLSLGKQLHS 565
            FAWN+LIQ+YL++ +  HV   YQ+ML  G  PDR TLPRVLAA S +   L +GKQ+H 
Sbjct: 70   FAWNSLIQSYLTSRDLHHVLFTYQQMLRRGVCPDRHTLPRVLAAVSGLSGGLFVGKQVHG 129

Query: 566  HVIKFGFSSDAYVTSSLLELYGQLDGIDAAKRYFENARFDKNNAVTWTLLARMYVKSSEP 745
            H IK GFS D YV S+LLE+YG+LD ID AK    + +  + NAV+WTLLAR+Y++  +P
Sbjct: 130  HAIKLGFSHDQYVISALLEMYGKLDDIDRAKCLILD-KSPRTNAVSWTLLARLYIREGKP 188

Query: 746  QSAIDLFFEMIEHIGNAIDAVAFVTVISACGMLKSLREGRRIHQIVKDYGLESDVLVGNS 925
              AIDLF++M++  G  ID+VA  T ISA  MLKSL++GR +HQI +  GLE  VLV NS
Sbjct: 189  SLAIDLFYQMLDS-GAEIDSVALATAISAAAMLKSLKDGRILHQIARQRGLEFKVLVSNS 247

Query: 926  LVKMYVDCGSVKDARVVFDSISCKDAISWTAIINGYVKKGGFNEGLKLFRLMSKNGIKAD 1105
            L+KMY+DCGS++DAR  FD +  +D ISWT II+ YVKKGG++EGLKLFR M  NG+K D
Sbjct: 248  LLKMYIDCGSIQDARAGFDRMPSRDIISWTEIIHAYVKKGGYSEGLKLFRRMITNGLKPD 307

Query: 1106 AFAISSVLPACARMAAHKNGKEIHGHLIRNGVELNTTVLNALMDMYNKSGSIEYASRIFS 1285
             F+ISS+LPACAR+ A+K GKEIHG+L+RN +++N TVLNAL+DMY KSG IE ASR+F+
Sbjct: 308  PFSISSILPACARVTANKQGKEIHGYLLRNRIDMNLTVLNALIDMYAKSGCIELASRMFA 367

Query: 1286 RMKDKDLVSWTVMIVGYSLHGQGNLGVQLFREMFDK-SNVEVDEMILSSVLYACHSSCMI 1462
            ++K KD++SWTVMI+GYSLHG+G+L V L RE+ ++ S V +D++  + VL AC S+  I
Sbjct: 368  QLKHKDVISWTVMILGYSLHGRGDLAVDLCRELENELSAVRLDQLRYADVLRACSSARKI 427

Query: 1463 DEGRYFFHLIRSPKVADCALMVSLLVRVGLFSEAKAFIEERKLARQREVLRALLDGYRIH 1642
            +EG+++F+ I++P+VA  ALMV LL    LF EA  FI+E K+ R  EVLRALLDG RIH
Sbjct: 428  EEGKFYFNRIKAPEVAHYALMVGLLANAALFDEAMLFIQENKIERHAEVLRALLDGCRIH 487

Query: 1643 QNAHEGKRIIEQLCDLEPLKTENYIMLSNWYAHHKKWDMVDKLRETIQDMGLTPKRAYSW 1822
            +    GKR+ EQL +LEPL  ENY++LSNWYAH+ KWD+V+K+R  I  M L PK+AYSW
Sbjct: 488  RRTDLGKRVAEQLSELEPLNAENYVLLSNWYAHNGKWDLVNKMRGMIGGMDLKPKKAYSW 547

Query: 1823 IELRNKVHVFRTGDESHPISLIIHSEIQRLMKKIEEHGGFRITSDFSLHDVDEERECPHT 2002
            IE RNKVHVFRTGD SHP S  I+ E++ LMKK+EE G  +  +D+SLHDVDEER+C   
Sbjct: 548  IESRNKVHVFRTGDVSHPRSQGIYWELECLMKKMEEEGQ-KPNADYSLHDVDEERDCIGV 606

Query: 2003 RHSELLAASFGLIYTKKGTTIRVTKNHRICRSCHDSVKAICRVVDREIIIRDPSDFHHFR 2182
             HSE+LA SFGLI +K   T+RVTKNHR+CR CH+S KAI  +V REII++DP+ FHHFR
Sbjct: 607  GHSEMLAISFGLISSKGSATVRVTKNHRVCRFCHESAKAISNIVGREIILKDPNRFHHFR 666

Query: 2183 DGICSCGDYW 2212
            DG+CSCGD+W
Sbjct: 667  DGLCSCGDFW 676


>ref|XP_004137884.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
            chloroplastic-like [Cucumis sativus]
          Length = 629

 Score =  712 bits (1837), Expect = 0.0
 Identities = 352/620 (56%), Positives = 456/620 (73%), Gaps = 1/620 (0%)
 Frame = +2

Query: 353  HHLFEGIPLKDTFAWNNLIQTYLSNGEPTHVTSVYQRMLLLGAKPDRRTLPRVLAASRIL 532
            H +F+ IP+ DTFAWNNLIQT+L+NG+  HV S Y++ML  G +PD+ TLPR++ A+R  
Sbjct: 13   HQVFDDIPIWDTFAWNNLIQTHLTNGDLGHVISTYRQMLFRGVRPDKHTLPRIICATRQY 72

Query: 533  RNLSLGKQLHSHVIKFGFSSDAYVTSSLLELYGQLDGIDAAKRYFENARFDKNNAVTWTL 712
             +L +GKQLH+   K GFSS+ YV +SL+ELYG LD  D AK   + +     N+V+WT+
Sbjct: 73   GDLQVGKQLHAQAFKLGFSSNLYVLTSLIELYGILDSADTAKWLHDKSTC--RNSVSWTV 130

Query: 713  LARMYVKSSEPQSAIDLFFEMIEHIGNAIDAVAFVTVISACGMLKSLREGRRIHQIVKDY 892
            LA++Y++  +P  A+DLF++M+E + + IDAVA  T I ACG LK L  GR IH + + +
Sbjct: 131  LAKLYLREDKPSLALDLFYQMVE-LADDIDAVALATAIGACGALKMLHHGRNIHHLARVH 189

Query: 893  GLESDVLVGNSLVKMYVDCGSVKDARVVFDSISCKDAISWTAIINGYVKKGGFNEGLKLF 1072
            GLE ++LV NSL+KMY+DC S+KDAR  FD +  KD ISWT +I+ YVKKGG NE  KLF
Sbjct: 190  GLEFNILVSNSLLKMYIDCDSIKDARGFFDQMPSKDIISWTELIHMYVKKGGINEAFKLF 249

Query: 1073 RLMSKNG-IKADAFAISSVLPACARMAAHKNGKEIHGHLIRNGVELNTTVLNALMDMYNK 1249
            R M+ +G +K D   ISS+LPAC RMAAHK+GKEIHG++++N  + N  V NAL+DMY K
Sbjct: 250  RQMNMDGELKPDPRTISSILPACGRMAAHKHGKEIHGYVVKNAFDENLIVQNALVDMYVK 309

Query: 1250 SGSIEYASRIFSRMKDKDLVSWTVMIVGYSLHGQGNLGVQLFREMFDKSNVEVDEMILSS 1429
            SG I+ AS+ FS MK+KD+VSW++M +GYSLHGQG LGV LFREM     +  DE+  ++
Sbjct: 310  SGCIQSASKTFSMMKEKDMVSWSIMTLGYSLHGQGKLGVSLFREMEKNFKMRRDEITYTA 369

Query: 1430 VLYACHSSCMIDEGRYFFHLIRSPKVADCALMVSLLVRVGLFSEAKAFIEERKLARQREV 1609
            VL+AC ++ M+DEG  +F  I  P VA  AL V+LL R G   EA+ F+E++KL +  E+
Sbjct: 370  VLHACTTANMVDEGDSYFSCITKPTVAHIALKVALLARAGRLDEARTFVEKKKLDKHPEI 429

Query: 1610 LRALLDGYRIHQNAHEGKRIIEQLCDLEPLKTENYIMLSNWYAHHKKWDMVDKLRETIQD 1789
            LRALLDG R H+    GKRIIEQLCDLEPL  ENYI+LSNWYA ++KWDMV+KLRETI+D
Sbjct: 430  LRALLDGCRNHRQQKLGKRIIEQLCDLEPLNAENYILLSNWYACNEKWDMVEKLRETIRD 489

Query: 1790 MGLTPKRAYSWIELRNKVHVFRTGDESHPISLIIHSEIQRLMKKIEEHGGFRITSDFSLH 1969
            MGL PK+AYSWIE  NK+HVF TGD SHP S  I+  +Q LMK++EE G  +   DFSLH
Sbjct: 490  MGLRPKKAYSWIEFCNKIHVFGTGDVSHPRSQNIYWNLQCLMKEMEEDGS-KPNPDFSLH 548

Query: 1970 DVDEERECPHTRHSELLAASFGLIYTKKGTTIRVTKNHRICRSCHDSVKAICRVVDREII 2149
            DVDEEREC    HSELLA SFGLI T+ G TIR+TKN R+C SCH+S K I ++V REII
Sbjct: 549  DVDEERECVPIGHSELLAISFGLISTEAGRTIRITKNLRVCHSCHESAKFISKMVGREII 608

Query: 2150 IRDPSDFHHFRDGICSCGDY 2209
            ++DP  FHHF+DG CSC ++
Sbjct: 609  VKDPYVFHHFKDGCCSCENF 628



 Score = 79.3 bits (194), Expect = 7e-12
 Identities = 45/177 (25%), Positives = 86/177 (48%)
 Frame = +2

Query: 965  ARVVFDSISCKDAISWTAIINGYVKKGGFNEGLKLFRLMSKNGIKADAFAISSVLPACAR 1144
            A  VFD I   D  +W  +I  ++  G     +  +R M   G++ D   +  ++ A  +
Sbjct: 12   AHQVFDDIPIWDTFAWNNLIQTHLTNGDLGHVISTYRQMLFRGVRPDKHTLPRIICATRQ 71

Query: 1145 MAAHKNGKEIHGHLIRNGVELNTTVLNALMDMYNKSGSIEYASRIFSRMKDKDLVSWTVM 1324
                + GK++H    + G   N  VL +L+++Y    S + A  +  +   ++ VSWTV+
Sbjct: 72   YGDLQVGKQLHAQAFKLGFSSNLYVLTSLIELYGILDSADTAKWLHDKSTCRNSVSWTVL 131

Query: 1325 IVGYSLHGQGNLGVQLFREMFDKSNVEVDEMILSSVLYACHSSCMIDEGRYFFHLIR 1495
               Y    + +L + LF +M + ++ ++D + L++ + AC +  M+  GR   HL R
Sbjct: 132  AKLYLREDKPSLALDLFYQMVELAD-DIDAVALATAIGACGALKMLHHGRNIHHLAR 187


>ref|XP_004301045.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
            chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 656

 Score =  708 bits (1827), Expect = 0.0
 Identities = 344/620 (55%), Positives = 461/620 (74%)
 Frame = +2

Query: 353  HHLFEGIPLKDTFAWNNLIQTYLSNGEPTHVTSVYQRMLLLGAKPDRRTLPRVLAASRIL 532
            H  F+G+   DT+AWN LIQT+++N +  +  S Y +ML  G +PDR TLPR L+ASR+ 
Sbjct: 41   HRAFDGMSHSDTYAWNKLIQTHIANNDFHYAVSTYDQMLHRGVRPDRHTLPRALSASRLS 100

Query: 533  RNLSLGKQLHSHVIKFGFSSDAYVTSSLLELYGQLDGIDAAKRYFENARFDKNNAVTWTL 712
             +LSLGKQLH H +KFG ++D YV ++L+ELYG+L   D AK  F+ A     + V+WT+
Sbjct: 101  DDLSLGKQLHCHAVKFGCANDRYVIAALIELYGRLQSADTAKCVFDKASV--KDLVSWTM 158

Query: 713  LARMYVKSSEPQSAIDLFFEMIEHIGNAIDAVAFVTVISACGMLKSLREGRRIHQIVKDY 892
            +AR+Y+   +P+ A+D+F  M+E  G  +DAVA  T   ACGM+KS+ +G ++H++ K+ 
Sbjct: 159  IARLYIVEGKPRMALDMFDGMVES-GAKMDAVALATAAGACGMMKSMTDGVKVHRVAKEQ 217

Query: 893  GLESDVLVGNSLVKMYVDCGSVKDARVVFDSISCKDAISWTAIINGYVKKGGFNEGLKLF 1072
            GLE DVLV NSL KMY+DCG ++DAR +FD    KD ISWT +I  YVKKGGFNEGLKLF
Sbjct: 218  GLEFDVLVSNSLSKMYIDCGCLEDARAIFDQRPAKDVISWTEMIRVYVKKGGFNEGLKLF 277

Query: 1073 RLMSKNGIKADAFAISSVLPACARMAAHKNGKEIHGHLIRNGVELNTTVLNALMDMYNKS 1252
            R M+ +G+K D  ++SSVLPACAR++A+K GKEIHG+L+RNG+ +N TV NALMDMY KS
Sbjct: 278  RQMAADGLKPDQLSVSSVLPACARVSAYKQGKEIHGYLLRNGIHMNLTVQNALMDMYIKS 337

Query: 1253 GSIEYASRIFSRMKDKDLVSWTVMIVGYSLHGQGNLGVQLFREMFDKSNVEVDEMILSSV 1432
            G IE A +IF+ +K KD++S+TVMI+GYSLHGQG LGV LFR+M  + ++++DE+  ++V
Sbjct: 338  GFIESALKIFAGLKHKDVISYTVMILGYSLHGQGPLGVDLFRQMEKELSIKIDELTYAAV 397

Query: 1433 LYACHSSCMIDEGRYFFHLIRSPKVADCALMVSLLVRVGLFSEAKAFIEERKLARQREVL 1612
            L+AC ++ M+ EG+ +F+ I++P VA CAL+V+LL   GLF EA++FI E+++    EVL
Sbjct: 398  LHACVAARMVKEGKCYFNCIKTPTVAHCALLVALLSHSGLFDEARSFISEKRIEGHAEVL 457

Query: 1613 RALLDGYRIHQNAHEGKRIIEQLCDLEPLKTENYIMLSNWYAHHKKWDMVDKLRETIQDM 1792
            RALLDG RIH+    GKR+ EQLCDLEPL  +NY++LSN YA ++KWD V  LR  I DM
Sbjct: 458  RALLDGCRIHKQLILGKRLAEQLCDLEPLNPDNYVLLSNLYADNEKWDTVFSLRGMITDM 517

Query: 1793 GLTPKRAYSWIELRNKVHVFRTGDESHPISLIIHSEIQRLMKKIEEHGGFRITSDFSLHD 1972
            GL PK A+SWIE RNK+HVF T D +HP S  ++ E+Q LMKK+E+        D+SLHD
Sbjct: 518  GLKPKEAFSWIEFRNKIHVFGTRDAAHPRSERLYWELQSLMKKMEDE-DIIPDLDYSLHD 576

Query: 1973 VDEERECPHTRHSELLAASFGLIYTKKGTTIRVTKNHRICRSCHDSVKAICRVVDREIII 2152
            V EEREC    HSE+LA SFGLI ++ GTTIRVTKN R+CR+CH S KAI ++V REII+
Sbjct: 577  VYEERECIQIGHSEMLAISFGLISSQTGTTIRVTKNLRVCRNCHASAKAISKMVGREIIL 636

Query: 2153 RDPSDFHHFRDGICSCGDYW 2212
            +DP  FHHF+DG CSCGD+W
Sbjct: 637  KDPKCFHHFKDGYCSCGDFW 656



 Score = 77.4 bits (189), Expect = 3e-11
 Identities = 49/212 (23%), Positives = 99/212 (46%), Gaps = 5/212 (2%)
 Frame = +2

Query: 965  ARVVFDSISCKDAISWTAIINGYVKKGGFNEGLKLFRLMSKNGIKADAFAISSVLPACAR 1144
            A   FD +S  D  +W  +I  ++    F+  +  +  M   G++ D   +   L A   
Sbjct: 40   AHRAFDGMSHSDTYAWNKLIQTHIANNDFHYAVSTYDQMLHRGVRPDRHTLPRALSASRL 99

Query: 1145 MAAHKNGKEIHGHLIRNGVELNTTVLNALMDMYNKSGSIEYASRIFSRMKDKDLVSWTVM 1324
                  GK++H H ++ G   +  V+ AL+++Y +  S + A  +F +   KDLVSWT++
Sbjct: 100  SDDLSLGKQLHCHAVKFGCANDRYVIAALIELYGRLQSADTAKCVFDKASVKDLVSWTMI 159

Query: 1325 IVGYSLHGQGNLGVQLFREMFDKSNVEVDEMILSSVLYACHSSCMIDEGRYFFHLIRSPK 1504
               Y + G+  + + +F  M + S  ++D + L++   AC     + +G    H +   +
Sbjct: 160  ARLYIVEGKPRMALDMFDGMVE-SGAKMDAVALATAAGACGMMKSMTDG-VKVHRVAKEQ 217

Query: 1505 VADCALMVS-----LLVRVGLFSEAKAFIEER 1585
              +  ++VS     + +  G   +A+A  ++R
Sbjct: 218  GLEFDVLVSNSLSKMYIDCGCLEDARAIFDQR 249


>ref|XP_002303738.2| hypothetical protein POPTR_0003s15840g, partial [Populus trichocarpa]
            gi|550343274|gb|EEE78717.2| hypothetical protein
            POPTR_0003s15840g, partial [Populus trichocarpa]
          Length = 566

 Score =  559 bits (1440), Expect(2) = e-157
 Identities = 271/517 (52%), Positives = 369/517 (71%)
 Frame = +2

Query: 386  TFAWNNLIQTYLSNGEPTHVTSVYQRMLLLGAKPDRRTLPRVLAASRILRNLSLGKQLHS 565
            TFAWNNLI T+LSN +P    S+Y  M++ GA PDRRTLPRVL ASRI  +L LGKQLH 
Sbjct: 34   TFAWNNLIHTHLSNRDPGGALSIYHHMMMRGACPDRRTLPRVLTASRICGDLFLGKQLHG 93

Query: 566  HVIKFGFSSDAYVTSSLLELYGQLDGIDAAKRYFENARFDKNNAVTWTLLARMYVKSSEP 745
              IK GF  + YV ++L+E+YG+LDGI+A K  F+ +   + N+V WT++ ++Y+  ++P
Sbjct: 94   QAIKLGFFDEHYVITALIEIYGRLDGIEAGKWLFDKS--PRRNSVAWTMILKLYLMENKP 151

Query: 746  QSAIDLFFEMIEHIGNAIDAVAFVTVISACGMLKSLREGRRIHQIVKDYGLESDVLVGNS 925
              AI++F++M+E +   ID+V  +T   ACG+LKS+  GRR+H + + + LESD+LV NS
Sbjct: 152  DLAINVFYQMVE-LNARIDSVVLITAAGACGLLKSVEHGRRVHDVARKFRLESDILVSNS 210

Query: 926  LVKMYVDCGSVKDARVVFDSISCKDAISWTAIINGYVKKGGFNEGLKLFRLMSKNGIKAD 1105
            L+KM +DC  ++DAR  F+ ++ KD ISWT II GYVKKG FNE LKLFR M+ +GIK D
Sbjct: 211  LLKMQIDCQRMEDARGFFNQMTTKDVISWTEIICGYVKKGEFNEALKLFRKMNMDGIKPD 270

Query: 1106 AFAISSVLPACARMAAHKNGKEIHGHLIRNGVELNTTVLNALMDMYNKSGSIEYASRIFS 1285
            + ++SSVLPACAR  AHKNGKEIHG+ +RNG++ N  V NA  DMY KSG ++YA ++F 
Sbjct: 271  SLSVSSVLPACARTVAHKNGKEIHGYSLRNGMDNNLIVQNATTDMYAKSGLVDYALKVFE 330

Query: 1286 RMKDKDLVSWTVMIVGYSLHGQGNLGVQLFREMFDKSNVEVDEMILSSVLYACHSSCMID 1465
            RMK +D++SWTVMI+G+SLHG+G LGV+LF  M     VE D+   ++VL+ C ++CM++
Sbjct: 331  RMKKRDVISWTVMILGFSLHGKGELGVELFCRMEKDQRVEADQFTYAAVLHCCTAACMVE 390

Query: 1466 EGRYFFHLIRSPKVADCALMVSLLVRVGLFSEAKAFIEERKLARQREVLRALLDGYRIHQ 1645
            EG+++F+ I+ P +   ALMVSLL R  LF EA+AF+EE  + R  EVLRALLDG  +H 
Sbjct: 391  EGKFYFNCIKEPNITHYALMVSLLARACLFDEARAFMEEHHIERHAEVLRALLDGCWMHH 450

Query: 1646 NAHEGKRIIEQLCDLEPLKTENYIMLSNWYAHHKKWDMVDKLRETIQDMGLTPKRAYSWI 1825
              + GK++ EQLCDLEPL  ENY++LSNWY+ + KWD+                +AYSWI
Sbjct: 451  RRNIGKQVFEQLCDLEPLDAENYVLLSNWYSDNGKWDL----------------KAYSWI 494

Query: 1826 ELRNKVHVFRTGDESHPISLIIHSEIQRLMKKIEEHG 1936
            E +NKVHVF TGD SHP S  I++E+Q LMKK+   G
Sbjct: 495  EFQNKVHVFGTGDISHPRSERIYTELQCLMKKLPWRG 531



 Score = 27.7 bits (60), Expect(2) = e-157
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = +1

Query: 1981 RKGVSSH*TQ*TISRLLWIDLYKKRDYNSRNQKP 2082
            R+GV S+  Q  +    W  LY  R  +S +QKP
Sbjct: 533  REGVHSNWAQRNVGTFFWAYLYTARGNHSHHQKP 566



 Score =  130 bits (326), Expect = 3e-27
 Identities = 92/363 (25%), Positives = 179/363 (49%), Gaps = 2/363 (0%)
 Frame = +2

Query: 359  LFEGIPLKDTFAWNNLIQTYLSNGEPTHVTSVYQRMLLLGAKPDRRTLPRVLAASRILRN 538
            LF+  P +++ AW  +++ YL   +P    +V+ +M+ L A+ D   L     A  +L++
Sbjct: 126  LFDKSPRRNSVAWTMILKLYLMENKPDLAINVFYQMVELNARIDSVVLITAAGACGLLKS 185

Query: 539  LSLGKQLHSHVIKFGFSSDAYVTSSLLELYGQLDGIDAAKRYFENARFDKNNAVTWTLLA 718
            +  G+++H    KF   SD  V++SLL++      ++ A+ +F   +    + ++WT + 
Sbjct: 186  VEHGRRVHDVARKFRLESDILVSNSLLKMQIDCQRMEDARGFFN--QMTTKDVISWTEII 243

Query: 719  RMYVKSSEPQSAIDLFFEMIEHIGNAIDAVAFVTVISACGMLKSLREGRRIHQIVKDYGL 898
              YVK  E   A+ LF +M    G   D+++  +V+ AC    + + G+ IH      G+
Sbjct: 244  CGYVKKGEFNEALKLFRKM-NMDGIKPDSLSVSSVLPACARTVAHKNGKEIHGYSLRNGM 302

Query: 899  ESDVLVGNSLVKMYVDCGSVKDARVVFDSISCKDAISWTAIINGYVKKGGFNEGLKLFRL 1078
            +++++V N+   MY   G V  A  VF+ +  +D ISWT +I G+   G    G++LF  
Sbjct: 303  DNNLIVQNATTDMYAKSGLVDYALKVFERMKKRDVISWTVMILGFSLHGKGELGVELFCR 362

Query: 1079 MSKN-GIKADAFAISSVLPACARMAAHKNGKEIHGHLIRNGVELNTTVLNALMDMYNKSG 1255
            M K+  ++AD F  ++VL  C      + GK  + + I+   E N T    ++ +  ++ 
Sbjct: 363  MEKDQRVEADQFTYAAVLHCCTAACMVEEGK-FYFNCIK---EPNITHYALMVSLLARAC 418

Query: 1256 SIEYASRIFSRMK-DKDLVSWTVMIVGYSLHGQGNLGVQLFREMFDKSNVEVDEMILSSV 1432
              + A         ++       ++ G  +H + N+G Q+F ++ D   ++ +  +L S 
Sbjct: 419  LFDEARAFMEEHHIERHAEVLRALLDGCWMHHRRNIGKQVFEQLCDLEPLDAENYVLLSN 478

Query: 1433 LYA 1441
             Y+
Sbjct: 479  WYS 481


>ref|XP_006423843.1| hypothetical protein CICLE_v10029811mg [Citrus clementina]
            gi|557525777|gb|ESR37083.1| hypothetical protein
            CICLE_v10029811mg [Citrus clementina]
          Length = 593

 Score =  454 bits (1168), Expect = e-125
 Identities = 267/583 (45%), Positives = 350/583 (60%), Gaps = 15/583 (2%)
 Frame = +2

Query: 509  VLAASRILRNLSLGKQLHSHVIKFGFSSDAYVTSSLLELYGQLDGIDAAKRYFENARFDK 688
            VL A R   NL  G Q+H    K  FS+D  V S+LL+LYG+LD ID+AK  F  +    
Sbjct: 62   VLTAPRFSGNLFFGNQVHGQAFKLAFSADHCVISALLDLYGRLDSIDSAKWVFVKSVKST 121

Query: 689  NNAVTWTLLARMYVKSSEPQSAIDLFFEMIEHIGNAIDAVAFVTVISACGMLKSLREGRR 868
            +N+V WT+LAR+Y+  ++   A+DLF +M+ ++   +D VA  T + AC +LKS++EGR+
Sbjct: 122  SNSVCWTILARLYLMQNQRSLALDLFHQMV-NLDAYVDRVALATAVGACRLLKSMQEGRK 180

Query: 869  IHQIVKDYGLESDVLVGNSLVKMYVDCGSVKDARVVFDSISCKDAISWTAIINGYVKKGG 1048
             H I   Y LE DVLV NS     +DCGS  DAR +FD +  KD ISWT  I   +K G 
Sbjct: 181  AHGIATKYRLEFDVLVSNS-----IDCGSFADARAIFDRMPSKDVISWTETIGLSMKNGS 235

Query: 1049 FNEGLKLFRLMSK--NGIKADAFAISSVLP------------ACARMAAHKNGKEIHGHL 1186
            FN+GLK  R M K  + ++  + A+ +++             A  R+      +++  HL
Sbjct: 236  FNDGLKSSRQMIKMFSKLRISSCALKTMMDGTRFSYTFRNPVASCRIGKIHLKEQVRNHL 295

Query: 1187 IRNGVELNTTVL-NALMDMYNKSGSIEYASRIFSRMKDKDLVSWTVMIVGYSLHGQGNLG 1363
             R+   L+T     A+MDMY KSG I+YAS +F+ +K +D++SWTVMI+G SLHGQ    
Sbjct: 296  QRS---LSTQAYAKAIMDMYVKSGFIQYASNLFAGIKVRDVISWTVMILGCSLHGQ---- 348

Query: 1364 VQLFREMFDKSNVEVDEMILSSVLYACHSSCMIDEGRYFFHLIRSPKVADCALMVSLLVR 1543
                     ++ +              +++ M++EG   F+ IRSPKV   ALMVS L R
Sbjct: 349  ---------RARI--------------NTAGMVEEGWLCFNRIRSPKVTHHALMVSALAR 385

Query: 1544 VGLFSEAKAFIEERKLARQREVLRALLDGYRIHQNAHEGKRIIEQLCDLEPLKTENYIML 1723
             GLF EA+ FI+E  + R  EVLRALL+G RIH     GKR+IEQLC+L+PL  EN IML
Sbjct: 386  AGLFDEARIFIQEYHMERYPEVLRALLEGCRIHVQVKTGKRVIEQLCELKPLSAENCIML 445

Query: 1724 SNWYAHHKKWDMVDKLRETIQDMGLTPKRAYSWIELRNKVHVFRTGDESHPISLIIHSEI 1903
            SNWYA   KWD+V+              +AYSWIE RNKVHVF TGD S P S  I  E+
Sbjct: 446  SNWYAAEAKWDVVN--------------QAYSWIEFRNKVHVFGTGDVSCPRSEGIFWEL 491

Query: 1904 QRLMKKIEEHGGFRITSDFSLHDVDEERECPHTRHSELLAASFGLIYTKKGTTIRVTKNH 2083
            Q LMKK+ E    R   DFSLH VDEER+     HSE+LA SFGLI T+ G TI VTKN 
Sbjct: 492  QSLMKKM-EGDSLRPKPDFSLHYVDEERKWTQIGHSEILALSFGLINTQVGATIHVTKNL 550

Query: 2084 RICRSCHDSVKAICRVVDREIIIRDPSDFHHFRDGICSCGDYW 2212
            R+   CHD  KAI ++V+ EIII+DPS FHHF  G CSC D+W
Sbjct: 551  RMRHICHDFAKAISKMVEGEIIIKDPSCFHHFEYGFCSCRDFW 593


>ref|XP_004160350.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
            chloroplastic-like [Cucumis sativus]
          Length = 429

 Score =  443 bits (1140), Expect = e-121
 Identities = 219/414 (52%), Positives = 296/414 (71%), Gaps = 1/414 (0%)
 Frame = +2

Query: 353  HHLFEGIPLKDTFAWNNLIQTYLSNGEPTHVTSVYQRMLLLGAKPDRRTLPRVLAASRIL 532
            H +F+ IP+ DTFAWNNLIQT+L+NG+  HV S Y++ML  G +PD+ TLPR++ A+R  
Sbjct: 13   HQVFDDIPIWDTFAWNNLIQTHLTNGDLGHVISTYRQMLFRGVRPDKHTLPRIICATRQY 72

Query: 533  RNLSLGKQLHSHVIKFGFSSDAYVTSSLLELYGQLDGIDAAKRYFENARFDKNNAVTWTL 712
             +L +GKQLH+   K GFSS+ YV +SL+ELYG LD  D AK   + +     N+V+WT+
Sbjct: 73   GDLQVGKQLHAQAFKLGFSSNLYVLTSLIELYGILDSADTAKWLHDKSTC--RNSVSWTV 130

Query: 713  LARMYVKSSEPQSAIDLFFEMIEHIGNAIDAVAFVTVISACGMLKSLREGRRIHQIVKDY 892
            LA++Y++  +P  A+DLF++M+E + + IDAVA  T I ACG LK L  GR IH + + +
Sbjct: 131  LAKLYLREDKPSLALDLFYQMVE-LADDIDAVALATAIGACGALKMLHHGRNIHHLARVH 189

Query: 893  GLESDVLVGNSLVKMYVDCGSVKDARVVFDSISCKDAISWTAIINGYVKKGGFNEGLKLF 1072
            GLE ++LV NSL+KMY+DC S+KDAR  FD +  KD ISWT +I+ YVKKGG NE  KLF
Sbjct: 190  GLEFNILVSNSLLKMYIDCDSIKDARGFFDQMPSKDIISWTELIHMYVKKGGINEAFKLF 249

Query: 1073 RLMSKNG-IKADAFAISSVLPACARMAAHKNGKEIHGHLIRNGVELNTTVLNALMDMYNK 1249
            R M+ +G +K D   ISS+LPAC RMAAHK+GKEIHG++++N  + N  V NAL+DMY K
Sbjct: 250  RQMNMDGELKPDPRTISSILPACGRMAAHKHGKEIHGYVVKNAFDENLIVQNALVDMYVK 309

Query: 1250 SGSIEYASRIFSRMKDKDLVSWTVMIVGYSLHGQGNLGVQLFREMFDKSNVEVDEMILSS 1429
            SG I+ AS+ FS MK+KD+VSW++M +GYSLHGQG LGV LFREM     +  DE+  ++
Sbjct: 310  SGCIQSASKTFSMMKEKDMVSWSIMTLGYSLHGQGKLGVSLFREMEKNFKMRRDEITYTA 369

Query: 1430 VLYACHSSCMIDEGRYFFHLIRSPKVADCALMVSLLVRVGLFSEAKAFIEERKL 1591
            VL+AC ++ M+DEG  +F  I  P VA  AL V+LL R G   EA+ F+E+R L
Sbjct: 370  VLHACTTANMVDEGDSYFSCITKPTVAHIALKVALLARAGRLDEARTFVEKRNL 423



 Score = 79.3 bits (194), Expect = 7e-12
 Identities = 45/177 (25%), Positives = 86/177 (48%)
 Frame = +2

Query: 965  ARVVFDSISCKDAISWTAIINGYVKKGGFNEGLKLFRLMSKNGIKADAFAISSVLPACAR 1144
            A  VFD I   D  +W  +I  ++  G     +  +R M   G++ D   +  ++ A  +
Sbjct: 12   AHQVFDDIPIWDTFAWNNLIQTHLTNGDLGHVISTYRQMLFRGVRPDKHTLPRIICATRQ 71

Query: 1145 MAAHKNGKEIHGHLIRNGVELNTTVLNALMDMYNKSGSIEYASRIFSRMKDKDLVSWTVM 1324
                + GK++H    + G   N  VL +L+++Y    S + A  +  +   ++ VSWTV+
Sbjct: 72   YGDLQVGKQLHAQAFKLGFSSNLYVLTSLIELYGILDSADTAKWLHDKSTCRNSVSWTVL 131

Query: 1325 IVGYSLHGQGNLGVQLFREMFDKSNVEVDEMILSSVLYACHSSCMIDEGRYFFHLIR 1495
               Y    + +L + LF +M + ++ ++D + L++ + AC +  M+  GR   HL R
Sbjct: 132  AKLYLREDKPSLALDLFYQMVELAD-DIDAVALATAIGACGALKMLHHGRNIHHLAR 187


>gb|EOY27956.1| Pentatricopeptide, putative [Theobroma cacao]
          Length = 874

 Score =  441 bits (1135), Expect = e-121
 Identities = 245/623 (39%), Positives = 359/623 (57%), Gaps = 5/623 (0%)
 Frame = +2

Query: 359  LFEGIPLKDTFAWNNLIQTYLSNGEPTHVTSVYQRMLLLGAKPDRRTLPRVLAASRILRN 538
            LF+ +  +D  +WN++I  Y+SNG       V++ ML LG   D  T+  VL        
Sbjct: 257  LFDELIDRDVISWNSMISGYVSNGLAEKGLEVFKEMLYLGIDVDLATIVTVLVGCANSGT 316

Query: 539  LSLGKQLHSHVIKFGFSSDAYVTSSLLELYGQLDGIDAAKRYFENARFDKNNAVTWTLLA 718
            LSLGK +H+  IK  F       ++LL++Y +   +D A R FE  +  + N V+WT + 
Sbjct: 317  LSLGKAVHALAIKACFERKLNFNNTLLDMYSKCGDLDGALRVFE--KMGERNVVSWTSMI 374

Query: 719  RMYVKSSEPQSAIDLFFEMIEHIGNAIDAVAFVTVISACGMLKSLREGRRIHQIVKDYGL 898
              Y +  +   AI L  +M E  G  +D VA  +V+ AC    SL  G+ +H  +K   +
Sbjct: 375  AGYTRDGQSDGAIRLLQQM-EREGVKLDVVAITSVLHACARSGSLENGKDVHDYIKANNV 433

Query: 899  ESDVLVGNSLVKMYVDCGSVKDARVVFDSISCKDAISWTAIINGYVKKGGFNEGLKLFRL 1078
            ES++ V N+L+ MY  CGS++DA  +F  ++ KD ISW  +I GY K    NE LK+   
Sbjct: 434  ESNLFVCNALMDMYAKCGSMEDANSIFSRMAVKDIISWNTMIGGYSKNCLPNEALKMLAA 493

Query: 1079 MSKNGIKADAFAISSVLPACARMAAHKNGKEIHGHLIRNGVELNTTVLNALMDMYNKSGS 1258
            M K  +K D+  ++ +LPACA +AA + GKEIHGH++RNG   +  V NAL+D+Y K G 
Sbjct: 494  MLKE-LKPDSRTLACILPACASLAALERGKEIHGHILRNGYFSDRHVANALVDLYVKCGV 552

Query: 1259 IEYASRIFSRMKDKDLVSWTVMIVGYSLHGQGNLGVQLFREMFDKSNVEVDEMILSSVLY 1438
            +  A  +F  +  KDLVSWTVMI GY +HG  N  +  F EM D + +E DE+   S+LY
Sbjct: 553  LALARLLFDMISSKDLVSWTVMIAGYGMHGFANEAITTFNEMRD-AGIEPDEVSFISILY 611

Query: 1439 ACHSSCMIDEGRYFFHLIRS-----PKVADCALMVSLLVRVGLFSEAKAFIEERKLARQR 1603
            AC  S +++EG  FF+++R+     PK+   A MV LL R G  S+A  FIE   +A   
Sbjct: 612  ACSHSGLLEEGWRFFYIMRNDYNIEPKLEHYACMVDLLSRTGNLSKAFHFIERMPIAPDA 671

Query: 1604 EVLRALLDGYRIHQNAHEGKRIIEQLCDLEPLKTENYIMLSNWYAHHKKWDMVDKLRETI 1783
             +  A+L G RI+ +    +R+ E++ +LEP  T  Y++L+N YA  +KW+ V ++RE I
Sbjct: 672  TIWGAVLCGCRIYHDVKLAERVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRVRERI 731

Query: 1784 QDMGLTPKRAYSWIELRNKVHVFRTGDESHPISLIIHSEIQRLMKKIEEHGGFRITSDFS 1963
               GL      SWIE++ KV++F  GD SHP S  I S +++L +K++  G F  T    
Sbjct: 732  GRKGLRKNPGCSWIEIKGKVNLFVAGDSSHPQSKKIESLLKKLRRKMKGEGYFPKTKYAL 791

Query: 1964 LHDVDEERECPHTRHSELLAASFGLIYTKKGTTIRVTKNHRICRSCHDSVKAICRVVDRE 2143
            ++  D ++E     HSE LA +FGL+      TIRVTKN RIC  CH+  K + +   RE
Sbjct: 792  INADDMQKEMALCGHSEKLAMAFGLLSLPPSKTIRVTKNLRICGDCHEMAKFMSKETGRE 851

Query: 2144 IIIRDPSDFHHFRDGICSCGDYW 2212
            I++RD + FHHF+DG CSC  +W
Sbjct: 852  IVLRDSNRFHHFKDGYCSCRGFW 874



 Score =  172 bits (435), Expect = 8e-40
 Identities = 117/425 (27%), Positives = 206/425 (48%), Gaps = 9/425 (2%)
 Frame = +2

Query: 449  SVYQRMLLLGAKP----DRRTLPRVLAASRILRNLSLGKQLHSHVIKFGFSSDAYVTSSL 616
            +++  M LL   P    + +T   +L     L++L  GK++HS +   G + D  + S L
Sbjct: 81   NLHNAMELLSMSPNSELESKTYCSILQLCADLKSLKDGKKVHSIINSNGVAVDEVLGSKL 140

Query: 617  LELYGQLDGIDAAKRYFENARFDKNNAVTWTLLARMYVKSSEPQSAIDLFFEMIEHIGNA 796
            +  Y     +   +  F+    +K     W  +   Y K  + + +I LF  M++  G  
Sbjct: 141  VSFYVTCGDLKEGRGIFDE--MEKKKVFLWNYMLNEYAKFGDFKESIYLFKMMMKK-GIE 197

Query: 797  IDAVAFVTVISACGMLKSLREGRRIHQIVKDYGLESDVLVGNSLVKMYVDCGSVKDARVV 976
            +D+  F  ++        L+EG R+H  +   G  S   V NSL+  Y     V+ A  +
Sbjct: 198  VDSYTFSCILKCLAASGGLKEGERVHGYLLKLGFGSYNSVVNSLITFYFKGKRVESASEL 257

Query: 977  FDSISCKDAISWTAIINGYVKKGGFNEGLKLFRLMSKNGIKADAFAISSVLPACARMAAH 1156
            FD +  +D ISW ++I+GYV  G   +GL++F+ M   GI  D   I +VL  CA     
Sbjct: 258  FDELIDRDVISWNSMISGYVSNGLAEKGLEVFKEMLYLGIDVDLATIVTVLVGCANSGTL 317

Query: 1157 KNGKEIHGHLIRNGVELNTTVLNALMDMYNKSGSIEYASRIFSRMKDKDLVSWTVMIVGY 1336
              GK +H   I+   E      N L+DMY+K G ++ A R+F +M ++++VSWT MI GY
Sbjct: 318  SLGKAVHALAIKACFERKLNFNNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGY 377

Query: 1337 SLHGQGNLGVQLFREMFDKSNVEVDEMILSSVLYACHSSCMIDEGRYFFHLIRSPKVAD- 1513
            +  GQ +  ++L ++M ++  V++D + ++SVL+AC  S  ++ G+     I++  V   
Sbjct: 378  TRDGQSDGAIRLLQQM-EREGVKLDVVAITSVLHACARSGSLENGKDVHDYIKANNVESN 436

Query: 1514 ---CALMVSLLVRVGLFSEAKAFIEERKLARQREVLRALLDGYRIHQNAHEG-KRIIEQL 1681
               C  ++ +  + G   +A + I  R   +       ++ GY  +   +E  K +   L
Sbjct: 437  LFVCNALMDMYAKCGSMEDANS-IFSRMAVKDIISWNTMIGGYSKNCLPNEALKMLAAML 495

Query: 1682 CDLEP 1696
             +L+P
Sbjct: 496  KELKP 500


>ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
            chloroplastic-like [Vitis vinifera]
          Length = 824

 Score =  439 bits (1128), Expect = e-120
 Identities = 236/623 (37%), Positives = 358/623 (57%), Gaps = 5/623 (0%)
 Frame = +2

Query: 359  LFEGIPLKDTFAWNNLIQTYLSNGEPTHVTSVYQRMLLLGAKPDRRTLPRVLAASRILRN 538
            LF+ +  +D  +WN++I  Y+SNG       ++++MLLLG   D  T+  V+A       
Sbjct: 207  LFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAGCSNTGM 266

Query: 539  LSLGKQLHSHVIKFGFSSDAYVTSSLLELYGQLDGIDAAKRYFENARFDKNNAVTWTLLA 718
            L LG+ LH + IK  F  +  + + LL++Y +   +++A + FE     + + V+WT + 
Sbjct: 267  LLLGRALHGYAIKASFGKELTLNNCLLDMYSKSGNLNSAIQVFET--MGERSVVSWTSMI 324

Query: 719  RMYVKSSEPQSAIDLFFEMIEHIGNAIDAVAFVTVISACGMLKSLREGRRIHQIVKDYGL 898
              Y +      ++ LF EM E  G + D     T++ AC     L  G+ +H  +K+  +
Sbjct: 325  AGYAREGLSDMSVRLFHEM-EKEGISPDIFTITTILHACACTGLLENGKDVHNYIKENKM 383

Query: 899  ESDVLVGNSLVKMYVDCGSVKDARVVFDSISCKDAISWTAIINGYVKKGGFNEGLKLFRL 1078
            +SD+ V N+L+ MY  CGS+ DA  VF  +  KD +SW  +I GY K    NE L LF  
Sbjct: 384  QSDLFVSNALMDMYAKCGSMGDAHSVFSEMQVKDIVSWNTMIGGYSKNSLPNEALNLFVE 443

Query: 1079 MSKNGIKADAFAISSVLPACARMAAHKNGKEIHGHLIRNGVELNTTVLNALMDMYNKSGS 1258
            M  N  K ++  ++ +LPACA +AA + G+EIHGH++RNG  L+  V NAL+DMY K G+
Sbjct: 444  MQYNS-KPNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGA 502

Query: 1259 IEYASRIFSRMKDKDLVSWTVMIVGYSLHGQGNLGVQLFREMFDKSNVEVDEMILSSVLY 1438
            +  A  +F  + +KDLVSWTVMI GY +HG G+  +  F EM   S +E DE+   S+LY
Sbjct: 503  LGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEM-RNSGIEPDEVSFISILY 561

Query: 1439 ACHSSCMIDEGRYFFHLIRS-----PKVADCALMVSLLVRVGLFSEAKAFIEERKLARQR 1603
            AC  S ++DEG  FF+++R+     PK    A +V LL R G  S+A  FI+   +    
Sbjct: 562  ACSHSGLLDEGWGFFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDA 621

Query: 1604 EVLRALLDGYRIHQNAHEGKRIIEQLCDLEPLKTENYIMLSNWYAHHKKWDMVDKLRETI 1783
             +  ALL G RI+ +    +++ E + +LEP  T  Y++L+N YA  +KW+ V KLRE I
Sbjct: 622  TIWGALLCGCRIYHDVKLAEKVAEHVFELEPENTGYYVLLANIYAEAEKWEEVKKLRERI 681

Query: 1784 QDMGLTPKRAYSWIELRNKVHVFRTGDESHPISLIIHSEIQRLMKKIEEHGGFRITSDFS 1963
               GL      SWIE++ KVH+F TGD SHP++  I   +++   +++E G F       
Sbjct: 682  GRRGLRKNPGCSWIEIKGKVHIFVTGDSSHPLANKIELLLKKTRTRMKEEGHFPKMRYAL 741

Query: 1964 LHDVDEERECPHTRHSELLAASFGLIYTKKGTTIRVTKNHRICRSCHDSVKAICRVVDRE 2143
            +   D E+E     HSE +A +FG++    G T+RVTKN R+C  CH+  K + ++V R+
Sbjct: 742  IKADDTEKEMALCGHSEKIAMAFGILSLPPGKTVRVTKNLRVCGDCHEMAKFMSKMVKRD 801

Query: 2144 IIIRDPSDFHHFRDGICSCGDYW 2212
            II+RD + FHHF+DG CSC  +W
Sbjct: 802  IILRDSNRFHHFKDGSCSCRGHW 824



 Score =  159 bits (401), Expect = 7e-36
 Identities = 89/286 (31%), Positives = 157/286 (54%), Gaps = 1/286 (0%)
 Frame = +2

Query: 644  IDAAKRYFENARFDKNNAVTWTLLARMYVKSSEPQSAIDLFFEMIEHIGNAIDAVAFVTV 823
            +++A++ F+       + ++W  +   YV +   +  +DLF +M+  +G   D    V+V
Sbjct: 201  VESARKLFDE--LGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLL-LGINTDLATMVSV 257

Query: 824  ISACGMLKSLREGRRIHQIVKDYGLESDVLVGNSLVKMYVDCGSVKDARVVFDSISCKDA 1003
            ++ C     L  GR +H          ++ + N L+ MY   G++  A  VF+++  +  
Sbjct: 258  VAGCSNTGMLLLGRALHGYAIKASFGKELTLNNCLLDMYSKSGNLNSAIQVFETMGERSV 317

Query: 1004 ISWTAIINGYVKKGGFNEGLKLFRLMSKNGIKADAFAISSVLPACARMAAHKNGKEIHGH 1183
            +SWT++I GY ++G  +  ++LF  M K GI  D F I+++L ACA     +NGK++H +
Sbjct: 318  VSWTSMIAGYAREGLSDMSVRLFHEMEKEGISPDIFTITTILHACACTGLLENGKDVHNY 377

Query: 1184 LIRNGVELNTTVLNALMDMYNKSGSIEYASRIFSRMKDKDLVSWTVMIVGYSLHGQGNLG 1363
            +  N ++ +  V NALMDMY K GS+  A  +FS M+ KD+VSW  MI GYS +   N  
Sbjct: 378  IKENKMQSDLFVSNALMDMYAKCGSMGDAHSVFSEMQVKDIVSWNTMIGGYSKNSLPNEA 437

Query: 1364 VQLFREMFDKSNVEVDEMILSSVLYACHSSCMIDEGRYFF-HLIRS 1498
            + LF EM  + N + + + ++ +L AC S   ++ G+    H++R+
Sbjct: 438  LNLFVEM--QYNSKPNSITMACILPACASLAALERGQEIHGHILRN 481



 Score =  147 bits (371), Expect = 2e-32
 Identities = 84/281 (29%), Positives = 140/281 (49%), Gaps = 49/281 (17%)
 Frame = +2

Query: 812  FVTVISACGMLKSLREGRRIHQIVKDYGLESDVLVGNSLVKMYVDCGS------------ 955
            + +V+  C  LKS+++GRRIH I++   +E D ++G+ LV MYV CG             
Sbjct: 104  YCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKVA 163

Query: 956  -------------------------------------VKDARVVFDSISCKDAISWTAII 1024
                                                 V+ AR +FD +  +D ISW ++I
Sbjct: 164  NEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKLFDELGDRDVISWNSMI 223

Query: 1025 NGYVKKGGFNEGLKLFRLMSKNGIKADAFAISSVLPACARMAAHKNGKEIHGHLIRNGVE 1204
            +GYV  G   +GL LF  M   GI  D   + SV+  C+       G+ +HG+ I+    
Sbjct: 224  SGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAGCSNTGMLLLGRALHGYAIKASFG 283

Query: 1205 LNTTVLNALMDMYNKSGSIEYASRIFSRMKDKDLVSWTVMIVGYSLHGQGNLGVQLFREM 1384
               T+ N L+DMY+KSG++  A ++F  M ++ +VSWT MI GY+  G  ++ V+LF EM
Sbjct: 284  KELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEM 343

Query: 1385 FDKSNVEVDEMILSSVLYACHSSCMIDEGRYFFHLIRSPKV 1507
             +K  +  D   ++++L+AC  + +++ G+   + I+  K+
Sbjct: 344  -EKEGISPDIFTITTILHACACTGLLENGKDVHNYIKENKM 383



 Score = 81.3 bits (199), Expect = 2e-12
 Identities = 48/170 (28%), Positives = 87/170 (51%)
 Frame = +2

Query: 353 HHLFEGIPLKDTFAWNNLIQTYLSNGEPTHVTSVYQRMLLLGAKPDRRTLPRVLAASRIL 532
           H +F  + +KD  +WN +I  Y  N  P    +++  M    +KP+  T+  +L A   L
Sbjct: 407 HSVFSEMQVKDIVSWNTMIGGYSKNSLPNEALNLFVEM-QYNSKPNSITMACILPACASL 465

Query: 533 RNLSLGKQLHSHVIKFGFSSDAYVTSSLLELYGQLDGIDAAKRYFENARFDKNNAVTWTL 712
             L  G+++H H+++ GFS D +V ++L+++Y +   +  A+  F+     + + V+WT+
Sbjct: 466 AALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFD--MIPEKDLVSWTV 523

Query: 713 LARMYVKSSEPQSAIDLFFEMIEHIGNAIDAVAFVTVISACGMLKSLREG 862
           +   Y        AI  F EM  + G   D V+F++++ AC     L EG
Sbjct: 524 MIAGYGMHGYGSEAIAAFNEM-RNSGIEPDEVSFISILYACSHSGLLDEG 572


>gb|EMJ15466.1| hypothetical protein PRUPE_ppa025121mg [Prunus persica]
          Length = 796

 Score =  437 bits (1123), Expect = e-119
 Identities = 241/624 (38%), Positives = 363/624 (58%), Gaps = 6/624 (0%)
 Frame = +2

Query: 359  LFEGIPLKDTFAWNNLIQTYLSNGEPTHVTSVYQRMLLLGAKPDRRTLPRVLAASRILRN 538
            +F+ +  +D  +WN++I  Y++NG       ++++ML LG   D  T+  VL A     N
Sbjct: 179  VFDELSDRDVISWNSMISAYVANGLAEKGVEIFRQMLSLGVDVDLATVINVLMACSDGGN 238

Query: 539  LSLGKQLHSHVIKFGFSSDAYVTSSLLELYGQLDGIDAAKRYFENARFDKNNAVTWTLLA 718
            LSLG+ LHS+ IK     D    +++L++Y +   + +A + F   +  + + V+WT + 
Sbjct: 239  LSLGRALHSYAIKTCLDMDIMFYNNVLDMYSKCGDLSSATQVF--GKMGQRSVVSWTSMI 296

Query: 719  RMYVKSSEPQSAIDLFFEMIEHIGNAIDAVAFVTVISACGMLKSLREGRRIHQIVKDYGL 898
              YV+      AI+LF EM E    + D     +++ AC    SL++GR IH+ ++++G+
Sbjct: 297  AGYVREGLSDEAIELFSEM-ERNDVSPDVYTITSILHACACNGSLKKGRDIHKYIREHGM 355

Query: 899  ESDVLVGNSLVKMYVDCGSVKDARVVFDSISCKDAISWTAIINGYVKKGGFNEGLKLFRL 1078
            +S + V N+L+ MY  CGS++DA  VF S+  KD +SW  +I GY K    NE LKLF  
Sbjct: 356  DSSLFVCNTLMDMYAKCGSMEDAHSVFSSMPVKDIVSWNTMIGGYSKNCLPNEALKLFSE 415

Query: 1079 MSKNGIKADAFAISSVLPACARMAAHKNGKEIHGHLIRNGVELNTTVLNALMDMYNKSGS 1258
            M +   K D   I+SVLPACA +AA   G+EIHGH++RNG   +  V NAL+DMY K G 
Sbjct: 416  MQQKS-KPDGMTIASVLPACASLAALNRGQEIHGHILRNGYFSDRYVANALVDMYVKCGV 474

Query: 1259 IEYASRIFSRMKDKDLVSWTVMIVGYSLHGQGNLGVQLFREMFDKSNVEVDEMILSSVLY 1438
            +  A  +F  +  KDL+SWTV++ GY +HG G+  +  F EM  KS ++ D +   S+LY
Sbjct: 475  LVLARLLFDIIPIKDLISWTVIVAGYGMHGFGSEAITAFNEM-RKSGIKPDSISFISILY 533

Query: 1439 ACHSSCMIDEGRYFFHLIRS-----PKVADCALMVSLLVRVGLFSEAKAFIEERKLARQR 1603
            AC  S ++DE   FF  +R+     PK+   A MV LL R G  ++A  FI +  +    
Sbjct: 534  ACSHSGLLDEAWRFFDSMRNDYSIVPKLEHYACMVDLLARTGNLTKAYKFINKMPIEPDA 593

Query: 1604 EVLRALLDGYRIHQNAHEGKRIIEQLCDLEPLKTENYIMLSNWYAHHKKWDMVDKLRETI 1783
             +  +LL G RIH +    +++ E++ +LEP  T  Y++L+N YA  +KW+ V KLRE I
Sbjct: 594  TIWGSLLCGCRIHHDVKLAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKKLRERI 653

Query: 1784 QDMGLTPKRAYSWIELRNKVHVFRTGDESHPISLIIHSEIQRLMKKIEEHGGFRITSDFS 1963
               GL      SWIE++ KV +F  G+ SHP +  I S ++RL  K++E  G+     ++
Sbjct: 654  GRQGLKKNPGCSWIEIKGKVQIFVAGNSSHPQATKIESLLKRLRLKMKEE-GYSPKMQYA 712

Query: 1964 LHDVDE-ERECPHTRHSELLAASFGLIYTKKGTTIRVTKNHRICRSCHDSVKAICRVVDR 2140
            L + DE E+E     HSE LA +FG++    G TIRVTKN R+C  CH+  K I +   R
Sbjct: 713  LINADEMEKEVALCGHSEKLAIAFGILNLPPGKTIRVTKNLRVCSDCHEMAKFISKTSRR 772

Query: 2141 EIIIRDPSDFHHFRDGICSCGDYW 2212
            EI++RD + FHH +DGICSC  +W
Sbjct: 773  EIVLRDSNRFHHMKDGICSCRGFW 796



 Score =  206 bits (524), Expect = 4e-50
 Identities = 123/415 (29%), Positives = 218/415 (52%), Gaps = 4/415 (0%)
 Frame = +2

Query: 347  KTHHLFEGIPLKDTFAWNNLIQTYLSNGEPTHVTSVYQRMLLLGAKPDRRTLPRVLAASR 526
            +   +F+ +     F WN +I  Y           ++++M  LG + +  T   +L    
Sbjct: 74   EARRVFDKLSNGKVFLWNLMINEYAKVRNFREGIHLFRKMQELGIQANSYTFSCILKCFS 133

Query: 527  ILRNLSLGKQLHSHVIKFGFSSDAYVTSSLLELYGQLDGIDAAKRYFENARFDKNNAVTW 706
             L  +  G+ +H ++ K GF SD  V +SL+  Y +   I++A++ F+       + ++W
Sbjct: 134  SLGYVREGEWVHGYLYKLGFGSDNTVGNSLMAFYFKNRIIESARKVFDE--LSDRDVISW 191

Query: 707  TLLARMYVKSSEPQSAIDLFFEMIEHIGNAIDAVAFVTVISACGMLKSLREGRRIHQIVK 886
              +   YV +   +  +++F +M+  +G  +D    + V+ AC    +L  GR +H    
Sbjct: 192  NSMISAYVANGLAEKGVEIFRQMLS-LGVDVDLATVINVLMACSDGGNLSLGRALHSYAI 250

Query: 887  DYGLESDVLVGNSLVKMYVDCGSVKDARVVFDSISCKDAISWTAIINGYVKKGGFNEGLK 1066
               L+ D++  N+++ MY  CG +  A  VF  +  +  +SWT++I GYV++G  +E ++
Sbjct: 251  KTCLDMDIMFYNNVLDMYSKCGDLSSATQVFGKMGQRSVVSWTSMIAGYVREGLSDEAIE 310

Query: 1067 LFRLMSKNGIKADAFAISSVLPACARMAAHKNGKEIHGHLIRNGVELNTTVLNALMDMYN 1246
            LF  M +N +  D + I+S+L ACA   + K G++IH ++  +G++ +  V N LMDMY 
Sbjct: 311  LFSEMERNDVSPDVYTITSILHACACNGSLKKGRDIHKYIREHGMDSSLFVCNTLMDMYA 370

Query: 1247 KSGSIEYASRIFSRMKDKDLVSWTVMIVGYSLHGQGNLGVQLFREMFDKSNVEVDEMILS 1426
            K GS+E A  +FS M  KD+VSW  MI GYS +   N  ++LF EM  KS  + D M ++
Sbjct: 371  KCGSMEDAHSVFSSMPVKDIVSWNTMIGGYSKNCLPNEALKLFSEMQQKS--KPDGMTIA 428

Query: 1427 SVLYACHSSCMIDEGRYFF-HLIRSPKVAD---CALMVSLLVRVGLFSEAKAFIE 1579
            SVL AC S   ++ G+    H++R+   +D      +V + V+ G+   A+   +
Sbjct: 429  SVLPACASLAALNRGQEIHGHILRNGYFSDRYVANALVDMYVKCGVLVLARLLFD 483



 Score =  168 bits (425), Expect = 1e-38
 Identities = 98/349 (28%), Positives = 179/349 (51%), Gaps = 4/349 (1%)
 Frame = +2

Query: 530  LRNLSLGKQLHSHVIKFGFSSDAYVTSSLLELYGQLDGIDAAKRYFENARFDKNNAVTWT 709
            L++L  GK++HS +   G   D  + + L+ ++ +   +  A+R F+  +        W 
Sbjct: 34   LKSLQDGKRVHSVICNNGAEVDGPLGAKLVFMFVKCGDLREARRVFD--KLSNGKVFLWN 91

Query: 710  LLARMYVKSSEPQSAIDLFFEMIEHIGNAIDAVAFVTVISACGMLKSLREGRRIHQIVKD 889
            L+   Y K    +  I LF +M + +G   ++  F  ++     L  +REG  +H  +  
Sbjct: 92   LMINEYAKVRNFREGIHLFRKM-QELGIQANSYTFSCILKCFSSLGYVREGEWVHGYLYK 150

Query: 890  YGLESDVLVGNSLVKMYVDCGSVKDARVVFDSISCKDAISWTAIINGYVKKGGFNEGLKL 1069
             G  SD  VGNSL+  Y     ++ AR VFD +S +D ISW ++I+ YV  G   +G+++
Sbjct: 151  LGFGSDNTVGNSLMAFYFKNRIIESARKVFDELSDRDVISWNSMISAYVANGLAEKGVEI 210

Query: 1070 FRLMSKNGIKADAFAISSVLPACARMAAHKNGKEIHGHLIRNGVELNTTVLNALMDMYNK 1249
            FR M   G+  D   + +VL AC+       G+ +H + I+  ++++    N ++DMY+K
Sbjct: 211  FRQMLSLGVDVDLATVINVLMACSDGGNLSLGRALHSYAIKTCLDMDIMFYNNVLDMYSK 270

Query: 1250 SGSIEYASRIFSRMKDKDLVSWTVMIVGYSLHGQGNLGVQLFREMFDKSNVEVDEMILSS 1429
             G +  A+++F +M  + +VSWT MI GY   G  +  ++LF EM ++++V  D   ++S
Sbjct: 271  CGDLSSATQVFGKMGQRSVVSWTSMIAGYVREGLSDEAIELFSEM-ERNDVSPDVYTITS 329

Query: 1430 VLYACHSSCMIDEGRYFFHLIR----SPKVADCALMVSLLVRVGLFSEA 1564
            +L+AC  +  + +GR     IR       +  C  ++ +  + G   +A
Sbjct: 330  ILHACACNGSLKKGRDIHKYIREHGMDSSLFVCNTLMDMYAKCGSMEDA 378



 Score =  156 bits (394), Expect = 4e-35
 Identities = 81/226 (35%), Positives = 130/226 (57%)
 Frame = +2

Query: 797  IDAVAFVTVISACGMLKSLREGRRIHQIVKDYGLESDVLVGNSLVKMYVDCGSVKDARVV 976
            +D   + +V+  C  LKSL++G+R+H ++ + G E D  +G  LV M+V CG +++AR V
Sbjct: 19   LDLEGYCSVLELCAGLKSLQDGKRVHSVICNNGAEVDGPLGAKLVFMFVKCGDLREARRV 78

Query: 977  FDSISCKDAISWTAIINGYVKKGGFNEGLKLFRLMSKNGIKADAFAISSVLPACARMAAH 1156
            FD +S      W  +IN Y K   F EG+ LFR M + GI+A+++  S +L   + +   
Sbjct: 79   FDKLSNGKVFLWNLMINEYAKVRNFREGIHLFRKMQELGIQANSYTFSCILKCFSSLGYV 138

Query: 1157 KNGKEIHGHLIRNGVELNTTVLNALMDMYNKSGSIEYASRIFSRMKDKDLVSWTVMIVGY 1336
            + G+ +HG+L + G   + TV N+LM  Y K+  IE A ++F  + D+D++SW  MI  Y
Sbjct: 139  REGEWVHGYLYKLGFGSDNTVGNSLMAFYFKNRIIESARKVFDELSDRDVISWNSMISAY 198

Query: 1337 SLHGQGNLGVQLFREMFDKSNVEVDEMILSSVLYACHSSCMIDEGR 1474
              +G    GV++FR+M     V+VD   + +VL AC     +  GR
Sbjct: 199  VANGLAEKGVEIFRQML-SLGVDVDLATVINVLMACSDGGNLSLGR 243


>gb|EXB84044.1| hypothetical protein L484_005808 [Morus notabilis]
          Length = 877

 Score =  429 bits (1103), Expect = e-117
 Identities = 241/624 (38%), Positives = 358/624 (57%), Gaps = 6/624 (0%)
 Frame = +2

Query: 359  LFEGIPLKDTFAWNNLIQTYLSNGEPTHVTSVYQRMLLLGAKPDRRTLPRVLAASRILRN 538
            +F+ +  +D  +WN++I  Y SNG       ++ +ML LG   D  T+   L A   +  
Sbjct: 261  VFDELTDRDVISWNSMISGYSSNGLGEKGVGIFGKMLSLGVNVDLATIVNALVACANIGT 320

Query: 539  LSLGKQLHSHVIKFGFSSDAYVTSSLLELYGQLDGIDAAKRYFENARFDKNNAVTWTLLA 718
              LG+ +H++ IK  F  +    ++LL++Y +   +DAA + FE     + + V+WT + 
Sbjct: 321  HLLGRAVHAYAIKACFDGEIMFRNTLLDMYSKCGELDAAVQVFEKT--GERSVVSWTSMI 378

Query: 719  RMYVKSSEPQSAIDLFFEMIEHIGNAIDAVAFVTVISACGMLKSLREGRRIHQIVKDYGL 898
              Y +      AI LF+EM E  G + D     +++ AC    SL +G+ +H  +++ G+
Sbjct: 379  AGYAREGRSNEAIRLFYEM-ERNGVSPDIFTITSILHACACSGSLEDGKDVHNYIRESGM 437

Query: 899  ESDVLVGNSLVKMYVDCGSVKDARVVFDSISCKDAISWTAIINGYVKKGGFNEGLKLFRL 1078
            ES++ V N+L+ MY  CGS+ DA +VF  +  KD ISW  +I GY K    NE LKLF  
Sbjct: 438  ESNLFVCNALMDMYSKCGSMDDANLVFSRMPAKDIISWNTMIGGYSKNRLPNEALKLFAE 497

Query: 1079 MSKNGIKADAFAISSVLPACARMAAHKNGKEIHGHLIRNGVELNTTVLNALMDMYNKSGS 1258
            M     KAD+   + +LPACA +AA   G+EIHGH++RNG   +  V NAL+DMY K G 
Sbjct: 498  MQGKS-KADSITAACILPACASLAALAKGREIHGHVLRNGYFQDRHVANALVDMYVKCGL 556

Query: 1259 IEYASRIFSRMKDKDLVSWTVMIVGYSLHGQGNLGVQLFREMFDKSNVEVDEMILSSVLY 1438
            +  A  +F  +  KDL+SWTVMI GY +HG G   +  F EM   + +E DE+   S+LY
Sbjct: 557  LALAQVLFDMIPVKDLISWTVMIAGYGMHGFGREAIAAFDEM-RHAGIEPDEVSFISILY 615

Query: 1439 ACHSSCMIDEGRYFFHLIRS-----PKVADCALMVSLLVRVGLFSEAKAFIEERKLARQR 1603
            AC  S + DEG  FF+++R+     P +   A MV LL R G  S+A  FI +  +    
Sbjct: 616  ACSHSGL-DEGWSFFNVMRNEYSIEPMLEHYACMVDLLSRTGNLSKAYRFIRKMPIEPDA 674

Query: 1604 EVLRALLDGYRIHQNAHEGKRIIEQLCDLEPLKTENYIMLSNWYAHHKKWDMVDKLRETI 1783
             +  ALL G R + +    +R+ E + +LEP  T  Y++L+N YA  +KW+ V KLRE I
Sbjct: 675  TIWGALLCGCRTYHDVKLAERVAEHVFELEPDNTGYYVLLANIYAEAEKWEEVRKLREKI 734

Query: 1784 QDMGLTPKRAYSWIELRNKVHVFRTGDESHPISLIIHSEIQRLMKKIEEHGGFRITSDFS 1963
               GL      SWIE++ KV++F  GD+S P++  I S ++RL  K++E G F     ++
Sbjct: 735  GRRGLKKNPGCSWIEIKGKVNIFVAGDDSQPLAKKIESLLKRLRAKMKEEG-FYPNMKYA 793

Query: 1964 LHDVDE-ERECPHTRHSELLAASFGLIYTKKGTTIRVTKNHRICRSCHDSVKAICRVVDR 2140
            L + DE E+E     HSE LA +FG++    G TIRVTKN R+C  CH++ K I ++  R
Sbjct: 794  LINADEMEKEVALCGHSEKLAMAFGMLSLPPGKTIRVTKNLRVCGDCHETAKFISKMSSR 853

Query: 2141 EIIIRDPSDFHHFRDGICSCGDYW 2212
            EI++RD + FHHF+DG CSC  +W
Sbjct: 854  EIVLRDSNRFHHFKDGHCSCRGFW 877



 Score =  180 bits (456), Expect = 3e-42
 Identities = 113/402 (28%), Positives = 200/402 (49%), Gaps = 4/402 (0%)
 Frame = +2

Query: 488  DRRTLPRVLAASRILRNLSLGKQLHSHVIKFGFSSDAYVTSSLLELYGQLDGIDAAKRYF 667
            + RT   VL      ++L  GK++HS +   G   D Y+   L+ +Y     +  A+R F
Sbjct: 102  ESRTYCSVLELCAQRKSLRDGKRVHSVIRDSGVEVDGYLGEKLVFMYVNCGDLREARRIF 161

Query: 668  ENARFDKNNAVTWTLLARMYVKSSEPQSAIDLFFEMIEHIGNAIDAVAFVTVISACGMLK 847
            +N   D+     W L+   Y K    + ++ LF +M E +G   ++     V+   G L 
Sbjct: 162  DNIYTDR--VFVWNLVINEYAKIRNFRESVSLFKKMQE-LGIQANSHTLSCVLKCFGALG 218

Query: 848  SLREGRRIHQIVKDYGLESDVLVGNSLVKMYVDCGSVKDARVVFDSISCKDAISWTAIIN 1027
            +L+EG RIH  +   G      V NSLV  Y   G V+ A+ VFD ++ +D ISW ++I+
Sbjct: 219  NLKEGERIHAYLYKLGFGCYNTVLNSLVAFYFKSGRVESAQKVFDELTDRDVISWNSMIS 278

Query: 1028 GYVKKGGFNEGLKLFRLMSKNGIKADAFAISSVLPACARMAAHKNGKEIHGHLIRNGVEL 1207
            GY   G   +G+ +F  M   G+  D   I + L ACA +  H  G+ +H + I+   + 
Sbjct: 279  GYSSNGLGEKGVGIFGKMLSLGVNVDLATIVNALVACANIGTHLLGRAVHAYAIKACFDG 338

Query: 1208 NTTVLNALMDMYNKSGSIEYASRIFSRMKDKDLVSWTVMIVGYSLHGQGNLGVQLFREMF 1387
                 N L+DMY+K G ++ A ++F +  ++ +VSWT MI GY+  G+ N  ++LF EM 
Sbjct: 339  EIMFRNTLLDMYSKCGELDAAVQVFEKTGERSVVSWTSMIAGYAREGRSNEAIRLFYEM- 397

Query: 1388 DKSNVEVDEMILSSVLYACHSSCMIDEGRYFFHLIRSPKVAD----CALMVSLLVRVGLF 1555
            +++ V  D   ++S+L+AC  S  +++G+   + IR   +      C  ++ +  + G  
Sbjct: 398  ERNGVSPDIFTITSILHACACSGSLEDGKDVHNYIRESGMESNLFVCNALMDMYSKCGSM 457

Query: 1556 SEAKAFIEERKLARQREVLRALLDGYRIHQNAHEGKRIIEQL 1681
             +A   +  R  A+       ++ GY  ++  +E  ++  ++
Sbjct: 458  DDAN-LVFSRMPAKDIISWNTMIGGYSKNRLPNEALKLFAEM 498



 Score =  163 bits (412), Expect = 3e-37
 Identities = 81/216 (37%), Positives = 127/216 (58%)
 Frame = +2

Query: 797  IDAVAFVTVISACGMLKSLREGRRIHQIVKDYGLESDVLVGNSLVKMYVDCGSVKDARVV 976
            +++  + +V+  C   KSLR+G+R+H +++D G+E D  +G  LV MYV+CG +++AR +
Sbjct: 101  LESRTYCSVLELCAQRKSLRDGKRVHSVIRDSGVEVDGYLGEKLVFMYVNCGDLREARRI 160

Query: 977  FDSISCKDAISWTAIINGYVKKGGFNEGLKLFRLMSKNGIKADAFAISSVLPACARMAAH 1156
            FD+I       W  +IN Y K   F E + LF+ M + GI+A++  +S VL     +   
Sbjct: 161  FDNIYTDRVFVWNLVINEYAKIRNFRESVSLFKKMQELGIQANSHTLSCVLKCFGALGNL 220

Query: 1157 KNGKEIHGHLIRNGVELNTTVLNALMDMYNKSGSIEYASRIFSRMKDKDLVSWTVMIVGY 1336
            K G+ IH +L + G     TVLN+L+  Y KSG +E A ++F  + D+D++SW  MI GY
Sbjct: 221  KEGERIHAYLYKLGFGCYNTVLNSLVAFYFKSGRVESAQKVFDELTDRDVISWNSMISGY 280

Query: 1337 SLHGQGNLGVQLFREMFDKSNVEVDEMILSSVLYAC 1444
            S +G G  GV +F +M     V VD   + + L AC
Sbjct: 281  SSNGLGEKGVGIFGKML-SLGVNVDLATIVNALVAC 315


>ref|XP_002512699.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223548660|gb|EEF50151.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 686

 Score =  426 bits (1096), Expect = e-116
 Identities = 209/391 (53%), Positives = 281/391 (71%), Gaps = 4/391 (1%)
 Frame = +2

Query: 371  IPLKDTFAWNNLIQTYLSNGEPTHVTSVYQRMLLLGAKPDRRTLPRVLAASRILRNLSLG 550
            IPL DTFAWNNLI ++L+N +P    S+Y  MLL GA PDRRT PRVL ASR+  NL LG
Sbjct: 57   IPLSDTFAWNNLIHSHLTNRDPFSALSIYLHMLLRGALPDRRTFPRVLNASRLSTNLFLG 116

Query: 551  KQLHSHVIKFGFSSDAYVTSSLLELYGQLDGIDAAKRYFENARFDKNNAVTWTLLARMYV 730
            KQ+H+  +KFGFSSD YV SSL++ YG LD  DAA+  F+N+     N+V+WT+LAR+Y+
Sbjct: 117  KQIHAQALKFGFSSDPYVISSLIDFYGHLDSTDAARSLFDNS--PSKNSVSWTVLARLYL 174

Query: 731  KSSEPQSAIDLFFEMIEHIGNAIDAVAFVTVISACGMLKSLREGRRIHQIVKDYGLESDV 910
              ++P   + LF++M++   +  D VA  T + ACGML+S+  G+ +H   K   LE D+
Sbjct: 175  MQNKPDVVLSLFYQMLD-FNSLFDPVALATALRACGMLRSMHHGKILHGFAKKCRLEFDI 233

Query: 911  LVGNSLVKMYVDCGSVKDARVVFDSISCKDAISWTAIINGYVKKGGFNEGLKLFRLMSKN 1090
            LV NSL+KMYVDC  ++DAR  F  +  KD ISWT IINGYVK G FNE LKLFR M+  
Sbjct: 234  LVSNSLLKMYVDCHCIEDARATFHQMPTKDIISWTEIINGYVKIGEFNEALKLFRQMNIA 293

Query: 1091 GIKADAFAISSVLPACARMAAHKNGKEIHGHLIRNGVELNTTVLNALMDMYNKSGSIEYA 1270
            GI+ D+ ++S++LPACAR AAHK G+EIH +L+RNG+ELN  + NAL+DMY KSG +E A
Sbjct: 294  GIRPDSLSLSTILPACARPAAHKLGREIHAYLLRNGIELNLMLQNALIDMYVKSGFMESA 353

Query: 1271 SRIFSRMKDKDLVSWTVMIVGYSLHGQGNLGVQLFREMFDKSNVEVDEMILSSVLYACHS 1450
            S IF RMK+KD++SWTVMI+G+SLHGQG LGV+LFR +    ++E+D+ I ++VL  C +
Sbjct: 354  SLIFVRMKEKDVISWTVMILGFSLHGQGELGVELFRRLEKDPSIEIDQYIYAAVLRCCTT 413

Query: 1451 SCMIDEGRYFFHLIRSPK----VADCALMVS 1531
            +CM++EG+ +F  I+ P     VADC   V+
Sbjct: 414  ACMVEEGKLYFGCIKEPNYGQAVADCLAKVA 444



 Score =  129 bits (324), Expect = 6e-27
 Identities = 84/275 (30%), Positives = 141/275 (51%), Gaps = 1/275 (0%)
 Frame = +2

Query: 359  LFEGIPLKDTFAWNNLIQTYLSNGEPTHVTSVYQRMLLLGAKPDRRTLPRVLAASRILRN 538
            LF+  P K++ +W  L + YL   +P  V S++ +ML   +  D   L   L A  +LR+
Sbjct: 154  LFDNSPSKNSVSWTVLARLYLMQNKPDVVLSLFYQMLDFNSLFDPVALATALRACGMLRS 213

Query: 539  LSLGKQLHSHVIKFGFSSDAYVTSSLLELYGQLDGIDAAKRYFENARFDKNNAVTWTLLA 718
            +  GK LH    K     D  V++SLL++Y     I+ A+  F   +    + ++WT + 
Sbjct: 214  MHHGKILHGFAKKCRLEFDILVSNSLLKMYVDCHCIEDARATFH--QMPTKDIISWTEII 271

Query: 719  RMYVKSSEPQSAIDLFFEMIEHIGNAIDAVAFVTVISACGMLKSLREGRRIHQIVKDYGL 898
              YVK  E   A+ LF +M    G   D+++  T++ AC    + + GR IH  +   G+
Sbjct: 272  NGYVKIGEFNEALKLFRQM-NIAGIRPDSLSLSTILPACARPAAHKLGREIHAYLLRNGI 330

Query: 899  ESDVLVGNSLVKMYVDCGSVKDARVVFDSISCKDAISWTAIINGYVKKGGFNEGLKLFRL 1078
            E ++++ N+L+ MYV  G ++ A ++F  +  KD ISWT +I G+   G    G++LFR 
Sbjct: 331  ELNLMLQNALIDMYVKSGFMESASLIFVRMKEKDVISWTVMILGFSLHGQGELGVELFRR 390

Query: 1079 MSKN-GIKADAFAISSVLPACARMAAHKNGKEIHG 1180
            + K+  I+ D +  ++VL  C      + GK   G
Sbjct: 391  LEKDPSIEIDQYIYAAVLRCCTTACMVEEGKLYFG 425



 Score = 70.9 bits (172), Expect = 2e-09
 Identities = 36/176 (20%), Positives = 86/176 (48%)
 Frame = +2

Query: 362 FEGIPLKDTFAWNNLIQTYLSNGEPTHVTSVYQRMLLLGAKPDRRTLPRVLAASRILRNL 541
           F  +P KD  +W  +I  Y+  GE      ++++M + G +PD  +L  +L A       
Sbjct: 256 FHQMPTKDIISWTEIINGYVKIGEFNEALKLFRQMNIAGIRPDSLSLSTILPACARPAAH 315

Query: 542 SLGKQLHSHVIKFGFSSDAYVTSSLLELYGQLDGIDAAKRYFENARFDKNNAVTWTLLAR 721
            LG+++H+++++ G   +  + ++L+++Y +   +++A   F   R  + + ++WT++  
Sbjct: 316 KLGREIHAYLLRNGIELNLMLQNALIDMYVKSGFMESASLIF--VRMKEKDVISWTVMIL 373

Query: 722 MYVKSSEPQSAIDLFFEMIEHIGNAIDAVAFVTVISACGMLKSLREGRRIHQIVKD 889
            +    + +  ++LF  + +     ID   +  V+  C     + EG+     +K+
Sbjct: 374 GFSLHGQGELGVELFRRLEKDPSIEIDQYIYAAVLRCCTTACMVEEGKLYFGCIKE 429


>ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
            chloroplastic-like [Cucumis sativus]
            gi|449500809|ref|XP_004161200.1| PREDICTED:
            pentatricopeptide repeat-containing protein At4g18750,
            chloroplastic-like [Cucumis sativus]
          Length = 926

 Score =  424 bits (1089), Expect = e-115
 Identities = 235/624 (37%), Positives = 350/624 (56%), Gaps = 6/624 (0%)
 Frame = +2

Query: 359  LFEGIPLKDTFAWNNLIQTYLSNGEPTHVTSVYQRMLLLGAKPDRRTLPRVLAASRILRN 538
            LF+ +  +D  +WN++I  Y+ NG       ++ +ML+ G   D  T+  V  A   +  
Sbjct: 308  LFDELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACANIGT 367

Query: 539  LSLGKQLHSHVIKFG-FSSDAYVTSSLLELYGQLDGIDAAKRYFENARFDKNNAVTWTLL 715
            L LGK LHS+ IK      +    ++LL++Y +   +++A R FE  R D+   V+WT +
Sbjct: 368  LLLGKVLHSYSIKAATLDREVRFNNTLLDMYSKCGDLNSAIRVFE--RMDEKTVVSWTSM 425

Query: 716  ARMYVKSSEPQSAIDLFFEMIEHIGNAIDAVAFVTVISACGMLKSLREGRRIHQIVKDYG 895
               YV+      AI LF EM    G   D  A  ++++AC +  +L+ G+ +H  +++  
Sbjct: 426  ITGYVREGLSDGAIKLFDEMKSR-GVVPDVYAVTSILNACAINGNLKSGKIVHDYIRENN 484

Query: 896  LESDVLVGNSLVKMYVDCGSVKDARVVFDSISCKDAISWTAIINGYVKKGGFNEGLKLFR 1075
            LE++  V N+L  MY  CGS+KDA  VF  +  KD ISW  +I GY K    NE L LF 
Sbjct: 485  LETNSFVSNALTDMYAKCGSMKDAHDVFSHMKKKDVISWNTMIGGYTKNSLPNEALTLFA 544

Query: 1076 LMSKNGIKADAFAISSVLPACARMAAHKNGKEIHGHLIRNGVELNTTVLNALMDMYNKSG 1255
             M +   K D   ++ +LPACA +AA   G+EIHG+ +RNG   +  V NA++DMY K G
Sbjct: 545  EMQRES-KPDGTTVACILPACASLAALDKGREIHGYALRNGYSEDKYVTNAVVDMYVKCG 603

Query: 1256 SIEYASRIFSRMKDKDLVSWTVMIVGYSLHGQGNLGVQLFREMFDKSNVEVDEMILSSVL 1435
             +  A  +F  + +KDLVSWTVMI GY +HG G+  +  F +M   + +E DE+   S+L
Sbjct: 604  LLVLARSLFDMIPNKDLVSWTVMIAGYGMHGYGSEAINTFNQM-RMTGIEPDEVSFISIL 662

Query: 1436 YACHSSCMIDEGRYFFHLIRS-----PKVADCALMVSLLVRVGLFSEAKAFIEERKLARQ 1600
            YAC  S ++DEG   F++++      P +   A MV LL R G   +A  FI+   +   
Sbjct: 663  YACSHSGLLDEGWKIFNIMKKECQIEPNLEHYACMVDLLARTGNLVKAHKFIKAMPIKPD 722

Query: 1601 REVLRALLDGYRIHQNAHEGKRIIEQLCDLEPLKTENYIMLSNWYAHHKKWDMVDKLRET 1780
              +  ALL G RIH +    +++ E++ +LEP  T  Y++L+N YA  +KW+ V KLR+ 
Sbjct: 723  ATIWGALLCGCRIHHDVKLAEKVAERIFELEPENTGYYVLLANIYAEAEKWEEVQKLRKK 782

Query: 1781 IQDMGLTPKRAYSWIELRNKVHVFRTGDESHPISLIIHSEIQRLMKKIEEHGGFRITSDF 1960
            I   GL      SWIE++ K+++F  GD S P +  I   ++RL  K++E G    T+  
Sbjct: 783  IGQRGLKKNPGCSWIEIKGKINIFVAGDCSKPQAKKIELLLKRLRSKMKEEGYSPKTAYA 842

Query: 1961 SLHDVDEERECPHTRHSELLAASFGLIYTKKGTTIRVTKNHRICRSCHDSVKAICRVVDR 2140
             L+  + E+E     HSE LA +FG++    G TIRVTKN R+C  CH+  K + +   R
Sbjct: 843  LLNADEREKEVALCGHSEKLAMAFGMLNLPPGKTIRVTKNLRVCGDCHEMAKFMSKSASR 902

Query: 2141 EIIIRDPSDFHHFRDGICSCGDYW 2212
            EII+RD S FHHF+DG CSC  YW
Sbjct: 903  EIILRDSSRFHHFKDGSCSCRGYW 926



 Score =  209 bits (533), Expect = 3e-51
 Identities = 134/448 (29%), Positives = 230/448 (51%), Gaps = 7/448 (1%)
 Frame = +2

Query: 359  LFEGIPLKDTFAWNNLIQTYLSNGEPTHVTSVYQRMLLLGAKPDRRTLPRVLAASRILRN 538
            +F+ +     F WN +I  Y  +G      +++++ML LG KP+  T   +L     +  
Sbjct: 207  VFDKLSESKIFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFSSILKCFAAVAR 266

Query: 539  LSLGKQLHSHVIKFGFSSDAYVTSSLLELYGQLDGIDAAKRYFENARFDKNNAVTWTLLA 718
            +  G+Q+H  + K GF+S   V +SL+  Y     +  A++ F+       + ++W  + 
Sbjct: 267  VEEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFD--ELTDRDVISWNSMI 324

Query: 719  RMYVKSSEPQSAIDLFFEMIEHIGNAIDAVAFVTVISACGMLKSLREGRRIHQI-VKDYG 895
              YVK+      I++F +M+   G  ID    V V  AC  + +L  G+ +H   +K   
Sbjct: 325  SGYVKNGLDDRGIEIFIKMLV-FGVDIDLATMVNVFVACANIGTLLLGKVLHSYSIKAAT 383

Query: 896  LESDVLVGNSLVKMYVDCGSVKDARVVFDSISCKDAISWTAIINGYVKKGGFNEGLKLFR 1075
            L+ +V   N+L+ MY  CG +  A  VF+ +  K  +SWT++I GYV++G  +  +KLF 
Sbjct: 384  LDREVRFNNTLLDMYSKCGDLNSAIRVFERMDEKTVVSWTSMITGYVREGLSDGAIKLFD 443

Query: 1076 LMSKNGIKADAFAISSVLPACARMAAHKNGKEIHGHLIRNGVELNTTVLNALMDMYNKSG 1255
             M   G+  D +A++S+L ACA     K+GK +H ++  N +E N+ V NAL DMY K G
Sbjct: 444  EMKSRGVVPDVYAVTSILNACAINGNLKSGKIVHDYIRENNLETNSFVSNALTDMYAKCG 503

Query: 1256 SIEYASRIFSRMKDKDLVSWTVMIVGYSLHGQGNLGVQLFREMFDKSNVEVDEMILSSVL 1435
            S++ A  +FS MK KD++SW  MI GY+ +   N  + LF EM  +S  + D   ++ +L
Sbjct: 504  SMKDAHDVFSHMKKKDVISWNTMIGGYTKNSLPNEALTLFAEMQRES--KPDGTTVACIL 561

Query: 1436 YACHSSCMIDEGRYFF-HLIRSPKVAD---CALMVSLLVRVGLFSEAKAFIEERKLARQR 1603
             AC S   +D+GR    + +R+    D      +V + V+ GL   A++  +   +   +
Sbjct: 562  PACASLAALDKGREIHGYALRNGYSEDKYVTNAVVDMYVKCGLLVLARSLFD---MIPNK 618

Query: 1604 EVL--RALLDGYRIHQNAHEGKRIIEQL 1681
            +++    ++ GY +H    E      Q+
Sbjct: 619  DLVSWTVMIAGYGMHGYGSEAINTFNQM 646



 Score =  145 bits (367), Expect = 6e-32
 Identities = 91/317 (28%), Positives = 161/317 (50%), Gaps = 1/317 (0%)
 Frame = +2

Query: 548  GKQLHSHVIKFGFSSDAYVTSSLLELYGQLDGIDAAKRYFENARFDKNNAVTWTLLARMY 727
            G+++ S +   G   D  +   L+ +Y +   +   +  F+  +  ++    W L+   Y
Sbjct: 169  GRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFD--KLSESKIFLWNLMISEY 226

Query: 728  VKSSEPQSAIDLFFEMIEHIGNAIDAVAFVTVISACGMLKSLREGRRIHQIVKDYGLESD 907
              S     +I+LF +M+E +G   ++  F +++     +  + EGR++H ++   G  S 
Sbjct: 227  SGSGNYGESINLFKQMLE-LGIKPNSYTFSSILKCFAAVARVEEGRQVHGLICKLGFNSY 285

Query: 908  VLVGNSLVKMYVDCGSVKDARVVFDSISCKDAISWTAIINGYVKKGGFNEGLKLFRLMSK 1087
              V NSL+  Y     V+ A+ +FD ++ +D ISW ++I+GYVK G  + G+++F  M  
Sbjct: 286  NTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLV 345

Query: 1088 NGIKADAFAISSVLPACARMAAHKNGKEIHGHLIRNG-VELNTTVLNALMDMYNKSGSIE 1264
             G+  D   + +V  ACA +     GK +H + I+   ++      N L+DMY+K G + 
Sbjct: 346  FGVDIDLATMVNVFVACANIGTLLLGKVLHSYSIKAATLDREVRFNNTLLDMYSKCGDLN 405

Query: 1265 YASRIFSRMKDKDLVSWTVMIVGYSLHGQGNLGVQLFREMFDKSNVEVDEMILSSVLYAC 1444
             A R+F RM +K +VSWT MI GY   G  +  ++LF EM  +  V  D   ++S+L AC
Sbjct: 406  SAIRVFERMDEKTVVSWTSMITGYVREGLSDGAIKLFDEMKSR-GVVPDVYAVTSILNAC 464

Query: 1445 HSSCMIDEGRYFFHLIR 1495
              +  +  G+     IR
Sbjct: 465  AINGNLKSGKIVHDYIR 481



 Score =  144 bits (362), Expect = 2e-31
 Identities = 70/215 (32%), Positives = 123/215 (57%)
 Frame = +2

Query: 800  DAVAFVTVISACGMLKSLREGRRIHQIVKDYGLESDVLVGNSLVKMYVDCGSVKDARVVF 979
            D  A+ +++  C   KS+R+GRR+  I++  G+  D ++G  LV MYV CG +K+ R+VF
Sbjct: 149  DLGAYCSILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMVF 208

Query: 980  DSISCKDAISWTAIINGYVKKGGFNEGLKLFRLMSKNGIKADAFAISSVLPACARMAAHK 1159
            D +S      W  +I+ Y   G + E + LF+ M + GIK +++  SS+L   A +A  +
Sbjct: 209  DKLSESKIFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFSSILKCFAAVARVE 268

Query: 1160 NGKEIHGHLIRNGVELNTTVLNALMDMYNKSGSIEYASRIFSRMKDKDLVSWTVMIVGYS 1339
             G+++HG + + G     TV+N+L+  Y     +  A ++F  + D+D++SW  MI GY 
Sbjct: 269  EGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYV 328

Query: 1340 LHGQGNLGVQLFREMFDKSNVEVDEMILSSVLYAC 1444
             +G  + G+++F +M     V++D   + +V  AC
Sbjct: 329  KNGLDDRGIEIFIKML-VFGVDIDLATMVNVFVAC 362


>ref|XP_006467621.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
            chloroplastic-like [Citrus sinensis]
          Length = 872

 Score =  423 bits (1087), Expect = e-115
 Identities = 235/626 (37%), Positives = 354/626 (56%), Gaps = 6/626 (0%)
 Frame = +2

Query: 353  HHLFEGIPLKDTFAWNNLIQTYLSNGEPTHVTSVYQRMLLLGAKPDRRTLPRVLAASRIL 532
            H LF+ +  +D  +WN +I  Y++NG       V++ ML LG   D  T+  VL+     
Sbjct: 253  HKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANC 312

Query: 533  RNLSLGKQLHSHVIKFGFSSDAYVTSSLLELYGQLDGIDAAKRYFENARFDKNNAVTWTL 712
              L  G+ +H+  +K  FS +    ++LL++Y +   +D A R FE  +  + + V+WT 
Sbjct: 313  GALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFE--KMGERSVVSWTS 370

Query: 713  LARMYVKSSEPQSAIDLFFEMIEHIGNAIDAVAFVTVISACGMLKSLREGRRIHQIVKDY 892
            +   Y +      AI LF  M+   G   D  A  +++ AC     L  G+ +H  +K+ 
Sbjct: 371  MIAGYAREGVFDGAIRLFRGMVRE-GIEPDVYAITSILHACACDGLLEIGKDVHDYIKEN 429

Query: 893  GLESDVLVGNSLVKMYVDCGSVKDARVVFDSISCKDAISWTAIINGYVKKGGFNEGLKLF 1072
             ++S + V N+L+ MY  CGS+ DA  VF+ +  KD +SW  +I GY K    NE L LF
Sbjct: 430  DMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGGYSKNSCPNEALDLF 489

Query: 1073 RLMSKNGIKADAFAISSVLPACARMAAHKNGKEIHGHLIRNGVELNTTVLNALMDMYNKS 1252
              M +N  + D   ++ +LPACA +AA + G+EIHG+++R+G+  +  V NA++DMY K 
Sbjct: 490  VAMLQN-FEPDGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKC 548

Query: 1253 GSIEYASRIFSRMKDKDLVSWTVMIVGYSLHGQGNLGVQLFREMFDKSNVEVDEMILSSV 1432
            G +  A  +F  +  KDL+SWT+MI GY +HG G   +  F +M  ++ +E DE+   SV
Sbjct: 549  GVLVLARSLFDMIPAKDLISWTIMIAGYGMHGFGCDAIATFNDM-RQAGIEPDEVSFISV 607

Query: 1433 LYACHSSCMIDEGRYFFHLIR-----SPKVADCALMVSLLVRVGLFSEAKAFIEERKLAR 1597
            LYAC  S ++DEG  FF+++R      PK+   A MV LL R G  SEA  FIE   +A 
Sbjct: 608  LYACSHSGLVDEGWRFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAP 667

Query: 1598 QREVLRALLDGYRIHQNAHEGKRIIEQLCDLEPLKTENYIMLSNWYAHHKKWDMVDKLRE 1777
               +  +LL G RIH      +++ E + +LEP  T  Y++L+N YA  +KW+ V KLRE
Sbjct: 668  DATIWGSLLCGCRIHHEVKLAEKVAEHVFELEPDNTGYYVLLANVYAEAEKWEEVKKLRE 727

Query: 1778 TIQDMGLTPKRAYSWIELRNKVHVFRTGDESHPISLIIHSEIQRLMKKIEEHGGFRITSD 1957
             I   GL      SWIE++ KV++F  G  SHP +  I S ++RL  +++  G F  T  
Sbjct: 728  KISRRGLKKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTR- 786

Query: 1958 FSLHDVDE-ERECPHTRHSELLAASFGLIYTKKGTTIRVTKNHRICRSCHDSVKAICRVV 2134
            ++L + DE E+E     HSE LA +FG++    G TIRVTKN R+C  CH+  K + +  
Sbjct: 787  YALINADEMEKEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTA 846

Query: 2135 DREIIIRDPSDFHHFRDGICSCGDYW 2212
             REI++RD + FHHF+DG CSC  +W
Sbjct: 847  RREIVLRDSNRFHHFKDGRCSCRGFW 872



 Score =  167 bits (423), Expect = 2e-38
 Identities = 97/333 (29%), Positives = 172/333 (51%), Gaps = 1/333 (0%)
 Frame = +2

Query: 479  AKPDRRTLPRVLAASRILRNLSLGKQLHSHVIKFGFS-SDAYVTSSLLELYGQLDGIDAA 655
            +K D +T   +L     L++L  GK++HS + + G    D  + S L+ ++     +   
Sbjct: 92   SKIDTKTYCSILQLCADLKSLEDGKKVHSIICESGIVIDDGVLGSKLVFMFVTCGDLKEG 151

Query: 656  KRYFENARFDKNNAVTWTLLARMYVKSSEPQSAIDLFFEMIEHIGNAIDAVAFVTVISAC 835
            +R F   + D      W LL   Y K+   + ++ LF +M + +G A D+  F  V+   
Sbjct: 152  RRVFN--KIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKM-QSLGIAADSYTFSCVLKCL 208

Query: 836  GMLKSLREGRRIHQIVKDYGLESDVLVGNSLVKMYVDCGSVKDARVVFDSISCKDAISWT 1015
             ++ +++EG  +H  +   G   +  V NSL+  Y     VKDA  +FD +S +D +SW 
Sbjct: 209  AVVGNVKEGESVHGFMLKLGFGCNNTVLNSLITYYFKSRRVKDAHKLFDELSDRDVVSWN 268

Query: 1016 AIINGYVKKGGFNEGLKLFRLMSKNGIKADAFAISSVLPACARMAAHKNGKEIHGHLIRN 1195
             +I+GY+  G   +GL++F+ M   G   D   + +VL  CA   A   G+ +H   ++ 
Sbjct: 269  CMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHAFALKA 328

Query: 1196 GVELNTTVLNALMDMYNKSGSIEYASRIFSRMKDKDLVSWTVMIVGYSLHGQGNLGVQLF 1375
                  +  N L+DMY+K G ++ A R+F +M ++ +VSWT MI GY+  G  +  ++LF
Sbjct: 329  CFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLF 388

Query: 1376 REMFDKSNVEVDEMILSSVLYACHSSCMIDEGR 1474
            R M  +  +E D   ++S+L+AC    +++ G+
Sbjct: 389  RGMV-REGIEPDVYAITSILHACACDGLLEIGK 420


>ref|XP_004294643.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
            chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 870

 Score =  422 bits (1085), Expect = e-115
 Identities = 235/624 (37%), Positives = 357/624 (57%), Gaps = 6/624 (0%)
 Frame = +2

Query: 359  LFEGIPLKDTFAWNNLIQTYLSNGEPTHVTSVYQRMLLLGAKPDRRTLPRVLAASRILRN 538
            +F+ +  +D  +WN++I  Y+SNG P     +++ M+  G   D  T+  VL A     N
Sbjct: 253  VFDALRERDVVSWNSMISAYVSNGAPEKGIEIFREMVWSGIDVDLATIINVLMACSDCGN 312

Query: 539  LSLGKQLHSHVIKFGFSSDAYVTSSLLELYGQLDGIDAAKRYFENARFDKNNAVTWTLLA 718
            + LG+ +H + +K GF  D  + +S+L++Y +   +  A R FE  +  + + V+WT + 
Sbjct: 313  VVLGRVVHGYAMKGGFDVDVVLCNSVLDMYSKCGDLSDAVRVFE--KMGRRSVVSWTSMI 370

Query: 719  RMYVKSSEPQSAIDLFFEMIEHIGNAIDAVAFVTVISACGMLKSLREGRRIHQIVKDYGL 898
              YV+      AI+LF EM E  G   D     +++ AC    SL +G+ IH+ ++++ +
Sbjct: 371  AGYVREGLSDKAIELFCEM-ETDGVIPDVYTITSILHACACSGSLEKGKDIHKYIREHDM 429

Query: 899  ESDVLVGNSLVKMYVDCGSVKDARVVFDSISCKDAISWTAIINGYVKKGGFNEGLKLFRL 1078
            +S + V NSL+ MY  CGS++DA  VF  +  KD +SW  +I GY K    NE L+LF  
Sbjct: 430  DSSLFVCNSLMDMYAKCGSMEDADSVFSHMPMKDIVSWNTMIGGYSKNCLPNEALELFSD 489

Query: 1079 MSKNGIKADAFAISSVLPACARMAAHKNGKEIHGHLIRNGVELNTTVLNALMDMYNKSGS 1258
            M +   K D+  ++SVLPACA +AA   G+EIHG+L+R+G  L+  V NAL+DMY K G 
Sbjct: 490  MQRK-FKPDSMTLASVLPACASLAALDRGQEIHGYLLRHGYFLDQYVANALVDMYVKCGV 548

Query: 1259 IEYASRIFSRMKDKDLVSWTVMIVGYSLHGQGNLGVQLFREMFDKSNVEVDEMILSSVLY 1438
            +  A  +F  +  KDL+S+TV+I GY +HG G   +  F EM  K+ +E D +   S+LY
Sbjct: 549  LILARVLFEMIPVKDLISYTVIIAGYGMHGFGKEAIAAFNEM-TKAEIEPDSISFISILY 607

Query: 1439 ACHSSCMIDEGRYFFHLIRS-----PKVADCALMVSLLVRVGLFSEAKAFIEERKLARQR 1603
            AC  S ++ EG  FF ++R+     P +   A MV LL R G  ++A  FI    +    
Sbjct: 608  ACSHSGLVQEGWRFFDIMRNDYKIEPMLEHYACMVDLLARTGNLTKAYKFINMMPIEPDA 667

Query: 1604 EVLRALLDGYRIHQNAHEGKRIIEQLCDLEPLKTENYIMLSNWYAHHKKWDMVDKLRETI 1783
             V  +LL G RIH +    +++ E + +LEP  T  YI+L+N YA  +KW+ V KLRE I
Sbjct: 668  TVWGSLLCGCRIHHDVKLAEKVAEHVFELEPENTGYYILLANIYAEAEKWEEVKKLRERI 727

Query: 1784 QDMGLTPKRAYSWIELRNKVHVFRTGDESHPISLIIHSEIQRLMKKIEEHGGFRITSDFS 1963
                L      SWIE++ KV++F  G  SHP ++ I S +++   +++E  G+     ++
Sbjct: 728  GRRSLKKNPGCSWIEIKGKVNIFVAGGTSHPDAMKIESLVKKFRSRMKE-DGYNPKMQYA 786

Query: 1964 LHDVDE-ERECPHTRHSELLAASFGLIYTKKGTTIRVTKNHRICRSCHDSVKAICRVVDR 2140
            L + DE E+E     HSE LA +FG++ T    TIRVTKN R+C  CH+  K I R   R
Sbjct: 787  LINADEVEKEVALCAHSEKLAIAFGILNTPPRKTIRVTKNLRVCGDCHEMAKFISRTSRR 846

Query: 2141 EIIIRDPSDFHHFRDGICSCGDYW 2212
            EI++RD + FHH +DG CSC  +W
Sbjct: 847  EIVLRDSNRFHHMKDGNCSCRGFW 870



 Score =  209 bits (531), Expect = 6e-51
 Identities = 125/415 (30%), Positives = 220/415 (53%), Gaps = 4/415 (0%)
 Frame = +2

Query: 347  KTHHLFEGIPLKDTFAWNNLIQTYLSNGEPTHVTSVYQRMLLLGAKPDRRTLPRVLAASR 526
            +   +F+ +  +  F WN +I  Y    +      ++ +M+  G + +  T   V     
Sbjct: 148  EARRVFDALSDRKVFLWNLMINEYAKVRDFREGVCLFGKMVECGVELNSYTFSCVFKCFA 207

Query: 527  ILRNLSLGKQLHSHVIKFGFSSDAYVTSSLLELYGQLDGIDAAKRYFENARFDKNNAVTW 706
             L  +  G+ +H ++ K  F SD+ V +SL+  Y +   +++A++ F+  R  + + V+W
Sbjct: 208  ALGCVREGEWVHGYLYKLRFGSDSNVVNSLMAFYFKNGRVESARKVFDALR--ERDVVSW 265

Query: 707  TLLARMYVKSSEPQSAIDLFFEMIEHIGNAIDAVAFVTVISACGMLKSLREGRRIHQIVK 886
              +   YV +  P+  I++F EM+   G  +D    + V+ AC    ++  GR +H    
Sbjct: 266  NSMISAYVSNGAPEKGIEIFREMVWS-GIDVDLATIINVLMACSDCGNVVLGRVVHGYAM 324

Query: 887  DYGLESDVLVGNSLVKMYVDCGSVKDARVVFDSISCKDAISWTAIINGYVKKGGFNEGLK 1066
              G + DV++ NS++ MY  CG + DA  VF+ +  +  +SWT++I GYV++G  ++ ++
Sbjct: 325  KGGFDVDVVLCNSVLDMYSKCGDLSDAVRVFEKMGRRSVVSWTSMIAGYVREGLSDKAIE 384

Query: 1067 LFRLMSKNGIKADAFAISSVLPACARMAAHKNGKEIHGHLIRNGVELNTTVLNALMDMYN 1246
            LF  M  +G+  D + I+S+L ACA   + + GK+IH ++  + ++ +  V N+LMDMY 
Sbjct: 385  LFCEMETDGVIPDVYTITSILHACACSGSLEKGKDIHKYIREHDMDSSLFVCNSLMDMYA 444

Query: 1247 KSGSIEYASRIFSRMKDKDLVSWTVMIVGYSLHGQGNLGVQLFREMFDKSNVEVDEMILS 1426
            K GS+E A  +FS M  KD+VSW  MI GYS +   N  ++LF +M  +   + D M L+
Sbjct: 445  KCGSMEDADSVFSHMPMKDIVSWNTMIGGYSKNCLPNEALELFSDM--QRKFKPDSMTLA 502

Query: 1427 SVLYACHSSCMIDEGRYFF-HLIRSPKVAD---CALMVSLLVRVGLFSEAKAFIE 1579
            SVL AC S   +D G+    +L+R     D      +V + V+ G+   A+   E
Sbjct: 503  SVLPACASLAALDRGQEIHGYLLRHGYFLDQYVANALVDMYVKCGVLILARVLFE 557



 Score =  174 bits (441), Expect = 2e-40
 Identities = 103/348 (29%), Positives = 180/348 (51%), Gaps = 4/348 (1%)
 Frame = +2

Query: 533  RNLSLGKQLHSHVIKFGFSSDAYVTSSLLELYGQLDGIDAAKRYFENARFDKNNAVTWTL 712
            ++L  GK++HS + + G + D YV + L+ +Y     +  A+R F+           W L
Sbjct: 109  KSLKDGKRVHSVLCEHGVNVDGYVGAKLVFMYVHCGDLREARRVFD--ALSDRKVFLWNL 166

Query: 713  LARMYVKSSEPQSAIDLFFEMIEHIGNAIDAVAFVTVISACGMLKSLREGRRIHQIVKDY 892
            +   Y K  + +  + LF +M+E  G  +++  F  V      L  +REG  +H  +   
Sbjct: 167  MINEYAKVRDFREGVCLFGKMVE-CGVELNSYTFSCVFKCFAALGCVREGEWVHGYLYKL 225

Query: 893  GLESDVLVGNSLVKMYVDCGSVKDARVVFDSISCKDAISWTAIINGYVKKGGFNEGLKLF 1072
               SD  V NSL+  Y   G V+ AR VFD++  +D +SW ++I+ YV  G   +G+++F
Sbjct: 226  RFGSDSNVVNSLMAFYFKNGRVESARKVFDALRERDVVSWNSMISAYVSNGAPEKGIEIF 285

Query: 1073 RLMSKNGIKADAFAISSVLPACARMAAHKNGKEIHGHLIRNGVELNTTVLNALMDMYNKS 1252
            R M  +GI  D   I +VL AC+       G+ +HG+ ++ G +++  + N+++DMY+K 
Sbjct: 286  REMVWSGIDVDLATIINVLMACSDCGNVVLGRVVHGYAMKGGFDVDVVLCNSVLDMYSKC 345

Query: 1253 GSIEYASRIFSRMKDKDLVSWTVMIVGYSLHGQGNLGVQLFREMFDKSNVEVDEMILSSV 1432
            G +  A R+F +M  + +VSWT MI GY   G  +  ++LF EM +   V  D   ++S+
Sbjct: 346  GDLSDAVRVFEKMGRRSVVSWTSMIAGYVREGLSDKAIELFCEM-ETDGVIPDVYTITSI 404

Query: 1433 LYACHSSCMIDEGRYFFHLIRSPKVAD----CALMVSLLVRVGLFSEA 1564
            L+AC  S  +++G+     IR   +      C  ++ +  + G   +A
Sbjct: 405  LHACACSGSLEKGKDIHKYIREHDMDSSLFVCNSLMDMYAKCGSMEDA 452



 Score =  156 bits (395), Expect = 3e-35
 Identities = 96/306 (31%), Positives = 165/306 (53%), Gaps = 7/306 (2%)
 Frame = +2

Query: 797  IDAVAFVTVISACGMLKSLREGRRIHQIVKDYGLESDVLVGNSLVKMYVDCGSVKDARVV 976
            +D+ A+ +V+  C   KSL++G+R+H ++ ++G+  D  VG  LV MYV CG +++AR V
Sbjct: 93   LDSAAYCSVLELCAGNKSLKDGKRVHSVLCEHGVNVDGYVGAKLVFMYVHCGDLREARRV 152

Query: 977  FDSISCKDAISWTAIINGYVKKGGFNEGLKLFRLMSKNGIKADAFAISSVLPACARMAAH 1156
            FD++S +    W  +IN Y K   F EG+ LF  M + G++ +++  S V    A +   
Sbjct: 153  FDALSDRKVFLWNLMINEYAKVRDFREGVCLFGKMVECGVELNSYTFSCVFKCFAALGCV 212

Query: 1157 KNGKEIHGHLIRNGVELNTTVLNALMDMYNKSGSIEYASRIFSRMKDKDLVSWTVMIVGY 1336
            + G+ +HG+L +     ++ V+N+LM  Y K+G +E A ++F  ++++D+VSW  MI  Y
Sbjct: 213  REGEWVHGYLYKLRFGSDSNVVNSLMAFYFKNGRVESARKVFDALRERDVVSWNSMISAY 272

Query: 1337 SLHGQGNLGVQLFREMFDKSNVEVDEMILSSVLYACHSSCMIDEGR----YFFHLIRSPK 1504
              +G    G+++FREM   S ++VD   + +VL AC     +  GR    Y         
Sbjct: 273  VSNGAPEKGIEIFREMV-WSGIDVDLATIINVLMACSDCGNVVLGRVVHGYAMKGGFDVD 331

Query: 1505 VADCALMVSLLVRVGLFSEAKAFIEERKLARQREV-LRALLDGYRIHQNAHEG--KRIIE 1675
            V  C  ++ +  + G  S+A    E  K+ R+  V   +++ GY       EG   + IE
Sbjct: 332  VVLCNSVLDMYSKCGDLSDAVRVFE--KMGRRSVVSWTSMIAGY-----VREGLSDKAIE 384

Query: 1676 QLCDLE 1693
              C++E
Sbjct: 385  LFCEME 390


>gb|ABR17838.1| unknown [Picea sitchensis]
          Length = 795

 Score =  422 bits (1085), Expect = e-115
 Identities = 227/624 (36%), Positives = 361/624 (57%), Gaps = 6/624 (0%)
 Frame = +2

Query: 359  LFEGIPLKDTFAWNNLIQTYLSNGEPTHVTSVYQRMLLLGAKPDRRTLPRVLAASRILRN 538
            +F+ +P +D  +WN +I  Y  NG+P    +++  M + G KP+  TL  V+     L  
Sbjct: 177  VFDRMPKRDVVSWNAIIAGYSQNGQPYEALALFSEMQVNGIKPNSSTLVSVMPVCAHLLA 236

Query: 539  LSLGKQLHSHVIKFGFSSDAYVTSSLLELYGQLDGIDAAKRYFENARFDKNNAVTWTLLA 718
            L  GKQ+H + I+ G  SD  V + L+ +Y +   ++ A + FE  R    +  +W  + 
Sbjct: 237  LEQGKQIHCYAIRSGIESDVLVVNGLVNMYAKCGNVNTAHKLFE--RMPIRDVASWNAII 294

Query: 719  RMYVKSSEPQSAIDLFFEMIEHIGNAIDAVAFVTVISACGMLKSLREGRRIHQIVKDYGL 898
              Y  +S+   A+  FF  ++  G   +++  V+V+ AC  L +L +G++IH      G 
Sbjct: 295  GGYSLNSQHHEAL-AFFNRMQVRGIKPNSITMVSVLPACAHLFALEQGQQIHGYAIRSGF 353

Query: 899  ESDVLVGNSLVKMYVDCGSVKDARVVFDSISCKDAISWTAIINGYVKKGGFNEGLKLFRL 1078
            ES+ +VGN+LV MY  CG+V  A  +F+ +  K+ ++W AII+GY + G  +E L LF  
Sbjct: 354  ESNDVVGNALVNMYAKCGNVNSAYKLFERMPKKNVVAWNAIISGYSQHGHPHEALALFIE 413

Query: 1079 MSKNGIKADAFAISSVLPACARMAAHKNGKEIHGHLIRNGVELNTTVLNALMDMYNKSGS 1258
            M   GIK D+FAI SVLPACA   A + GK+IHG+ IR+G E N  V   L+D+Y K G+
Sbjct: 414  MQAQGIKPDSFAIVSVLPACAHFLALEQGKQIHGYTIRSGFESNVVVGTGLVDIYAKCGN 473

Query: 1259 IEYASRIFSRMKDKDLVSWTVMIVGYSLHGQGNLGVQLFREMFDKSNVEVDEMILSSVLY 1438
            +  A ++F RM ++D+VSWT MI+ Y +HG G   + LF +M  ++  ++D +  +++L 
Sbjct: 474  VNTAQKLFERMPEQDVVSWTTMILAYGIHGHGEDALALFSKM-QETGTKLDHIAFTAILT 532

Query: 1439 ACHSSCMIDEGRYFFHLIRS-----PKVADCALMVSLLVRVGLFSEAKAFIEERKLARQR 1603
            AC  + ++D+G  +F  ++S     PK+   A +V LL R G   EA   I+   L    
Sbjct: 533  ACSHAGLVDQGLQYFQCMKSDYGLAPKLEHYACLVDLLGRAGHLDEANGIIKNMSLEPDA 592

Query: 1604 EVLRALLDGYRIHQNAHEGKRIIEQLCDLEPLKTENYIMLSNWYAHHKKWDMVDKLRETI 1783
             V  ALL   RIH N   G++  + L +L+P     Y++LSN YA  ++W+ V KLR+ +
Sbjct: 593  NVWGALLGACRIHCNIELGEQAAKHLFELDPDNAGYYVLLSNIYAEAQRWEDVAKLRKMM 652

Query: 1784 QDMGLTPKRAYSWIELRNKVHVFRTGDESHPISLIIHSEIQRLMKKIEEHGGFRITSDFS 1963
            ++ G+  +   S + +   V  F  GD +HP S  I++ ++ L +++ +  G+   ++ +
Sbjct: 653  KEKGVKKQPGCSVVAVHRDVQTFLVGDRTHPQSEQIYAMLEILYEQMRK-AGYVPNTNLA 711

Query: 1964 LHDVDEE-RECPHTRHSELLAASFGLIYTKKGTTIRVTKNHRICRSCHDSVKAICRVVDR 2140
            L DV+EE +E   + HSE LA SFG+I T  G  IR+ KN R+C  CH++ K I ++V R
Sbjct: 712  LQDVEEEAKENILSSHSEKLAISFGIINTSPGIPIRIMKNLRVCSDCHNATKFISKIVGR 771

Query: 2141 EIIIRDPSDFHHFRDGICSCGDYW 2212
            EII+RD + FHH ++G CSCGDYW
Sbjct: 772  EIIVRDANRFHHVKNGFCSCGDYW 795



 Score =  225 bits (574), Expect = 6e-56
 Identities = 126/360 (35%), Positives = 196/360 (54%)
 Frame = +2

Query: 395  WNNLIQTYLSNGEPTHVTSVYQRMLLLGAKPDRRTLPRVLAASRILRNLSLGKQLHSHVI 574
            W   I  Y+ NG       +Y +M   G  PD+     V+ A     +L  G+++H  +I
Sbjct: 88   WKETIIGYVKNGFWNKALRLYYQMQRTGINPDKLVFLSVIKACGSQSDLQAGRKVHEDII 147

Query: 575  KFGFSSDAYVTSSLLELYGQLDGIDAAKRYFENARFDKNNAVTWTLLARMYVKSSEPQSA 754
              GF SD  V ++L  +Y +   ++ A++ F+  R  K + V+W  +   Y ++ +P  A
Sbjct: 148  ARGFESDVIVGTALASMYTKCGSLENARQVFD--RMPKRDVVSWNAIIAGYSQNGQPYEA 205

Query: 755  IDLFFEMIEHIGNAIDAVAFVTVISACGMLKSLREGRRIHQIVKDYGLESDVLVGNSLVK 934
            + LF EM +  G   ++   V+V+  C  L +L +G++IH      G+ESDVLV N LV 
Sbjct: 206  LALFSEM-QVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLVVNGLVN 264

Query: 935  MYVDCGSVKDARVVFDSISCKDAISWTAIINGYVKKGGFNEGLKLFRLMSKNGIKADAFA 1114
            MY  CG+V  A  +F+ +  +D  SW AII GY      +E L  F  M   GIK ++  
Sbjct: 265  MYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPNSIT 324

Query: 1115 ISSVLPACARMAAHKNGKEIHGHLIRNGVELNTTVLNALMDMYNKSGSIEYASRIFSRMK 1294
            + SVLPACA + A + G++IHG+ IR+G E N  V NAL++MY K G++  A ++F RM 
Sbjct: 325  MVSVLPACAHLFALEQGQQIHGYAIRSGFESNDVVGNALVNMYAKCGNVNSAYKLFERMP 384

Query: 1295 DKDLVSWTVMIVGYSLHGQGNLGVQLFREMFDKSNVEVDEMILSSVLYACHSSCMIDEGR 1474
             K++V+W  +I GYS HG  +  + LF EM     ++ D   + SVL AC     +++G+
Sbjct: 385  KKNVVAWNAIISGYSQHGHPHEALALFIEM-QAQGIKPDSFAIVSVLPACAHFLALEQGK 443



 Score =  200 bits (508), Expect = 3e-48
 Identities = 119/352 (33%), Positives = 199/352 (56%), Gaps = 5/352 (1%)
 Frame = +2

Query: 686  KNNAVTWTLLARMYVKSSEPQSAIDLFFEMIEHIGNAIDAVAFVTVISACGMLKSLREGR 865
            +NNAV W      YVK+     A+ L+++M +  G   D + F++VI ACG    L+ GR
Sbjct: 82   RNNAVVWKETIIGYVKNGFWNKALRLYYQM-QRTGINPDKLVFLSVIKACGSQSDLQAGR 140

Query: 866  RIHQIVKDYGLESDVLVGNSLVKMYVDCGSVKDARVVFDSISCKDAISWTAIINGYVKKG 1045
            ++H+ +   G ESDV+VG +L  MY  CGS+++AR VFD +  +D +SW AII GY + G
Sbjct: 141  KVHEDIIARGFESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQNG 200

Query: 1046 GFNEGLKLFRLMSKNGIKADAFAISSVLPACARMAAHKNGKEIHGHLIRNGVELNTTVLN 1225
               E L LF  M  NGIK ++  + SV+P CA + A + GK+IH + IR+G+E +  V+N
Sbjct: 201  QPYEALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLVVN 260

Query: 1226 ALMDMYNKSGSIEYASRIFSRMKDKDLVSWTVMIVGYSLHGQGNLGVQLFREMFDKSNVE 1405
             L++MY K G++  A ++F RM  +D+ SW  +I GYSL+ Q +  +  F  M     ++
Sbjct: 261  GLVNMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRM-QVRGIK 319

Query: 1406 VDEMILSSVLYACHSSCMIDEGRYFF-HLIRSPKVADCAL---MVSLLVRVGLFSEA-KA 1570
             + + + SVL AC     +++G+    + IRS   ++  +   +V++  + G  + A K 
Sbjct: 320  PNSITMVSVLPACAHLFALEQGQQIHGYAIRSGFESNDVVGNALVNMYAKCGNVNSAYKL 379

Query: 1571 FIEERKLARQREVLRALLDGYRIHQNAHEGKRIIEQLCDLEPLKTENYIMLS 1726
            F  ER   +      A++ GY  H + HE   +  ++   + +K +++ ++S
Sbjct: 380  F--ERMPKKNVVAWNAIISGYSQHGHPHEALALFIEM-QAQGIKPDSFAIVS 428



 Score =  179 bits (453), Expect = 6e-42
 Identities = 119/427 (27%), Positives = 205/427 (48%), Gaps = 3/427 (0%)
 Frame = +2

Query: 170  SQLPMAVNTFSSQSIQKHHSF-FSTFLESPTLFQNSGIASNHYFSCCKCSSQMSDKLTQT 346
            S +P+  +  + +  ++ H +   + +ES  L  N  +  N Y  C   ++         
Sbjct: 226  SVMPVCAHLLALEQGKQIHCYAIRSGIESDVLVVNGLV--NMYAKCGNVNT--------- 274

Query: 347  KTHHLFEGIPLKDTFAWNNLIQTYLSNGEPTHVTSVYQRMLLLGAKPDRRTLPRVLAASR 526
              H LFE +P++D  +WN +I  Y  N +     + + RM + G KP+  T+  VL A  
Sbjct: 275  -AHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPNSITMVSVLPACA 333

Query: 527  ILRNLSLGKQLHSHVIKFGFSSDAYVTSSLLELYGQLDGIDAAKRYFENARFDKNNAVTW 706
             L  L  G+Q+H + I+ GF S+  V ++L+ +Y +   +++A + FE  R  K N V W
Sbjct: 334  HLFALEQGQQIHGYAIRSGFESNDVVGNALVNMYAKCGNVNSAYKLFE--RMPKKNVVAW 391

Query: 707  TLLARMYVKSSEPQSAIDLFFEMIEHIGNAIDAVAFVTVISACGMLKSLREGRRIHQIVK 886
              +   Y +   P  A+ LF EM +  G   D+ A V+V+ AC    +L +G++IH    
Sbjct: 392  NAIISGYSQHGHPHEALALFIEM-QAQGIKPDSFAIVSVLPACAHFLALEQGKQIHGYTI 450

Query: 887  DYGLESDVLVGNSLVKMYVDCGSVKDARVVFDSISCKDAISWTAIINGYVKKGGFNEGLK 1066
              G ES+V+VG  LV +Y  CG+V  A+ +F+ +  +D +SWT +I  Y   G   + L 
Sbjct: 451  RSGFESNVVVGTGLVDIYAKCGNVNTAQKLFERMPEQDVVSWTTMILAYGIHGHGEDALA 510

Query: 1067 LFRLMSKNGIKADAFAISSVLPACARMAAHKNGKEIHGHLIRN-GVELNTTVLNALMDMY 1243
            LF  M + G K D  A +++L AC+       G +    +  + G+         L+D+ 
Sbjct: 511  LFSKMQETGTKLDHIAFTAILTACSHAGLVDQGLQYFQCMKSDYGLAPKLEHYACLVDLL 570

Query: 1244 NKSGSIEYASRIFSRMK-DKDLVSWTVMIVGYSLHGQGNLGVQLFREMFDKSNVEVDEMI 1420
             ++G ++ A+ I   M  + D   W  ++    +H    LG Q  + +F+         +
Sbjct: 571  GRAGHLDEANGIIKNMSLEPDANVWGALLGACRIHCNIELGEQAAKHLFELDPDNAGYYV 630

Query: 1421 LSSVLYA 1441
            L S +YA
Sbjct: 631  LLSNIYA 637


>gb|AHB18405.1| pentatricopeptide repeat-containing protein [Gossypium hirsutum]
          Length = 875

 Score =  422 bits (1084), Expect = e-115
 Identities = 238/625 (38%), Positives = 363/625 (58%), Gaps = 7/625 (1%)
 Frame = +2

Query: 359  LFEGIPLKDTFAWNNLIQTYLSNGEPTHVTSVYQRMLLLGAKPDRRTLPRVLAASRILRN 538
            LF+ +  +D  +WN++I  Y+SNG       +Y++M+ LG   D  T+  VL        
Sbjct: 257  LFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGT 316

Query: 539  LSLGKQLHSHVIKFGFSSDAYVTSSLLELYGQLDGIDAAKRYFENARFDKNNAVTWTLLA 718
            LSLGK +HS  IK  F      +++LL++Y +   +D A R FE  +  + N V+WT + 
Sbjct: 317  LSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFE--KMGERNVVSWTSMI 374

Query: 719  RMYVKSSEPQSAIDLFFEMIEHIGNAIDAVAFVTVISACGMLKSLREGRRIHQIVKDYGL 898
              Y +      AI L  +M E  G  +D VA  +++ AC    SL  G+ +H  +K   +
Sbjct: 375  AGYTRDGWSDGAIILLQQM-EKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNM 433

Query: 899  ESDVLVGNSLVKMYVDCGSVKDARVVFDSISCKDAISWTAIINGYVKKGGFNEGLKLFRL 1078
             S++ V N+L+ MY  CGS++ A  VF ++  KD ISW  ++ GY K    NE LK F  
Sbjct: 434  ASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVGGYSKNCLPNEALKTFAA 493

Query: 1079 MSKNGIKADAFAISSVLPACARMAAHKNGKEIHGHLIRNGVELNTTVLNALMDMYNKSGS 1258
            M K  +K D+  ++ +LPACA ++A + GKEIHG+++RNG   +  V NAL+D+Y K G 
Sbjct: 494  MLKE-LKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGV 552

Query: 1259 IEYASRIFSRMKDKDLVSWTVMIVGYSLHGQGNLGVQLFREMFDKSNVEVDEMILSSVLY 1438
            +  A  +F  +  KDLVSWTVMI GY +HG GN  +  F EM D + +E DE+   S+LY
Sbjct: 553  LGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRD-AGIEPDEVSFISILY 611

Query: 1439 ACHSSCMIDEGRYFFHLIRS-----PKVADCALMVSLLVRVGLFSEAKAFIEERKLARQR 1603
            AC  S ++++G  FF+++++     PK+   A MV LL R G  S+A  FIE   +A   
Sbjct: 612  ACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDA 671

Query: 1604 EVLRALLDGYRIHQNAHEGKRIIEQLCDLEPLKTENYIMLSNWYAHHKKWDMVDKLRETI 1783
             +  ALL G RI+ +    +++ E++ +LEP  T  Y++L+N YA  +K + V ++RE I
Sbjct: 672  TIWGALLCGCRIYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKREEVKRMREKI 731

Query: 1784 QDMGLTPKRAYSWIELRNKVHVFRTG-DESHPISLIIHSEIQRLMKKIEEHGGFRITSDF 1960
               GL      SWIE++ +V++F +G + SHP S  I S ++++ +K++E G F  T  +
Sbjct: 732  GKKGLRKNPGCSWIEIKGRVNLFVSGNNSSHPHSKKIESLLKKMRRKMKEEGYFPKTK-Y 790

Query: 1961 SLHDVDE-ERECPHTRHSELLAASFGLIYTKKGTTIRVTKNHRICRSCHDSVKAICRVVD 2137
            +L + DE ++E     HSE LA +FGL+      TIRVTKN R+C  CH+  K + +   
Sbjct: 791  ALINADEMQKEMALCGHSEKLAMAFGLLTLPPRKTIRVTKNLRVCGDCHEMAKFMSKETR 850

Query: 2138 REIIIRDPSDFHHFRDGICSCGDYW 2212
            REI++RD + FHHF+DG CSC  +W
Sbjct: 851  REIVLRDSNRFHHFKDGYCSCRGFW 875



 Score =  194 bits (493), Expect = 1e-46
 Identities = 120/454 (26%), Positives = 231/454 (50%), Gaps = 8/454 (1%)
 Frame = +2

Query: 359  LFEGIPLKDTFAWNNLIQTYLSNGEPTHVTSVYQRMLLLGAKPDRRTLPRVLAASRILRN 538
            +F+ +  K+ + WN ++  Y   G+      +++ M+  G + +  T   VL     L +
Sbjct: 156  VFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEVNSYTFSCVLKCFAALGS 215

Query: 539  LSLGKQLHSHVIKFGFSSDAYVTSSLLELYGQLDGIDAAKRYFENARFDKNNAVTWTLLA 718
            L  G+ +H +++K GF S   V +SL+  Y +    ++A   F+  +    + ++W  + 
Sbjct: 216  LKEGECVHGYLLKLGFGSCNSVVNSLIAFYFKGKRPESASELFD--KLCDRDVISWNSMI 273

Query: 719  RMYVKSSEPQSAIDLFFEMIEHIGNAIDAVAFVTVISACGMLKSLREGRRIHQIVKDYGL 898
              YV +   +  + ++ +M+ ++G  +D    ++V+  C    +L  G+ +H +      
Sbjct: 274  SGYVSNGLTERGLGIYKQMM-YLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSF 332

Query: 899  ESDVLVGNSLVKMYVDCGSVKDARVVFDSISCKDAISWTAIINGYVKKGGFNEGLKLFRL 1078
            E  +   N+L+ MY  CG +  A  VF+ +  ++ +SWT++I GY + G  +  + L + 
Sbjct: 333  ERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQQ 392

Query: 1079 MSKNGIKADAFAISSVLPACARMAAHKNGKEIHGHLIRNGVELNTTVLNALMDMYNKSGS 1258
            M K G+K D  AI+S+L ACAR  +  NGK++H ++  N +  N  V NALMDMY K GS
Sbjct: 393  MEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNLFVCNALMDMYAKCGS 452

Query: 1259 IEYASRIFSRMKDKDLVSWTVMIVGYSLHGQGNLGVQLFREMFDKSNVEVDEMILSSVLY 1438
            +E A+ +FS M  KD++SW  M+ GYS +   N  ++ F  M     ++ D   ++ +L 
Sbjct: 453  MEGANSVFSTMVVKDIISWNTMVGGYSKNCLPNEALKTFAAML--KELKPDSRTMACILP 510

Query: 1439 ACHSSCMIDEGRYFF-HLIRSPKVAD---CALMVSLLVRVGLFSEAKAFIEERKLARQRE 1606
            AC S   ++ G+    +++R+   +D      +V L V+ G+   A+   +   +   ++
Sbjct: 511  ACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFD---MIPSKD 567

Query: 1607 VL--RALLDGYRIHQNAHEGKRIIEQLCD--LEP 1696
            ++    ++ GY +H   +E      ++ D  +EP
Sbjct: 568  LVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEP 601



 Score =  169 bits (429), Expect = 4e-39
 Identities = 106/365 (29%), Positives = 179/365 (49%), Gaps = 4/365 (1%)
 Frame = +2

Query: 488  DRRTLPRVLAASRILRNLSLGKQLHSHVIKFGFSSDAYVTSSLLELYGQLDGIDAAKRYF 667
            + +T   VL     L++L+ GK++HS +       D  +   L+  Y     +   +R F
Sbjct: 98   ETKTYGSVLQLCAGLKSLTDGKKVHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVF 157

Query: 668  ENARFDKNNAVTWTLLARMYVKSSEPQSAIDLFFEMIEHIGNAIDAVAFVTVISACGMLK 847
            +    +K N   W  +   Y K  + + +I LF  M+E  G  +++  F  V+     L 
Sbjct: 158  DT--MEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEK-GIEVNSYTFSCVLKCFAALG 214

Query: 848  SLREGRRIHQIVKDYGLESDVLVGNSLVKMYVDCGSVKDARVVFDSISCKDAISWTAIIN 1027
            SL+EG  +H  +   G  S   V NSL+  Y      + A  +FD +  +D ISW ++I+
Sbjct: 215  SLKEGECVHGYLLKLGFGSCNSVVNSLIAFYFKGKRPESASELFDKLCDRDVISWNSMIS 274

Query: 1028 GYVKKGGFNEGLKLFRLMSKNGIKADAFAISSVLPACARMAAHKNGKEIHGHLIRNGVEL 1207
            GYV  G    GL +++ M   GI  D   I SVL  CA       GK +H   I++  E 
Sbjct: 275  GYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFER 334

Query: 1208 NTTVLNALMDMYNKSGSIEYASRIFSRMKDKDLVSWTVMIVGYSLHGQGNLGVQLFREMF 1387
                 N L+DMY+K G ++ A R+F +M ++++VSWT MI GY+  G  +  + L ++M 
Sbjct: 335  RINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQQM- 393

Query: 1388 DKSNVEVDEMILSSVLYACHSSCMIDEGRYFFHLIRSPKVAD----CALMVSLLVRVGLF 1555
            +K  V++D + ++S+L+AC  S  +D G+     I++  +A     C  ++ +  + G  
Sbjct: 394  EKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNLFVCNALMDMYAKCGSM 453

Query: 1556 SEAKA 1570
              A +
Sbjct: 454  EGANS 458



 Score =  143 bits (361), Expect = 3e-31
 Identities = 72/226 (31%), Positives = 129/226 (57%)
 Frame = +2

Query: 797  IDAVAFVTVISACGMLKSLREGRRIHQIVKDYGLESDVLVGNSLVKMYVDCGSVKDARVV 976
            ++   + +V+  C  LKSL +G+++H I+K   +  D  +G  LV  Y  CG +K+ R V
Sbjct: 97   LETKTYGSVLQLCAGLKSLTDGKKVHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRV 156

Query: 977  FDSISCKDAISWTAIINGYVKKGGFNEGLKLFRLMSKNGIKADAFAISSVLPACARMAAH 1156
            FD++  K+   W  +++ Y K G F E + LF++M + GI+ +++  S VL   A + + 
Sbjct: 157  FDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEVNSYTFSCVLKCFAALGSL 216

Query: 1157 KNGKEIHGHLIRNGVELNTTVLNALMDMYNKSGSIEYASRIFSRMKDKDLVSWTVMIVGY 1336
            K G+ +HG+L++ G     +V+N+L+  Y K    E AS +F ++ D+D++SW  MI GY
Sbjct: 217  KEGECVHGYLLKLGFGSCNSVVNSLIAFYFKGKRPESASELFDKLCDRDVISWNSMISGY 276

Query: 1337 SLHGQGNLGVQLFREMFDKSNVEVDEMILSSVLYACHSSCMIDEGR 1474
              +G    G+ ++++M     ++VD   + SVL  C +S  +  G+
Sbjct: 277  VSNGLTERGLGIYKQMM-YLGIDVDLATIISVLVGCANSGTLSLGK 321