BLASTX nr result
ID: Catharanthus22_contig00019482
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00019482
(407 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006649485.1| PREDICTED: mitochondrial tRNA-specific 2-thi... 56 2e-16
gb|EEC74610.1| hypothetical protein OsI_10221 [Oryza sativa Indi... 56 2e-16
ref|NP_001049129.1| Os03g0174600 [Oryza sativa Japonica Group] g... 56 2e-16
gb|EEE58416.1| hypothetical protein OsJ_09614 [Oryza sativa Japo... 56 2e-16
ref|XP_002894309.1| tRNA (5-methylaminomethyl-2-thiouridylate)-m... 56 8e-16
gb|EXB93298.1| tRNA-specific 2-thiouridylase mnmA [Morus notabilis] 55 1e-15
ref|NP_175542.2| tRNA (5-methylaminomethyl-2-thiouridylate)-meth... 55 1e-15
dbj|BAD95081.1| hypothetical protein [Arabidopsis thaliana] 55 1e-15
ref|XP_006307321.1| hypothetical protein CARUB_v10008942mg [Caps... 55 1e-15
ref|XP_006280360.1| hypothetical protein CARUB_v10026287mg [Caps... 55 1e-15
gb|AAD30642.1|AC006085_15 Unknown protein [Arabidopsis thaliana]... 55 1e-15
ref|XP_004247484.1| PREDICTED: tRNA-specific 2-thiouridylase Mnm... 54 2e-15
ref|XP_006393065.1| hypothetical protein EUTSA_v10011432mg [Eutr... 55 4e-15
ref|XP_004985520.1| PREDICTED: mitochondrial tRNA-specific 2-thi... 54 4e-15
gb|EMT11416.1| tRNA-specific 2-thiouridylase mnmA [Aegilops taus... 54 5e-15
ref|XP_003558694.1| PREDICTED: tRNA-specific 2-thiouridylase mnm... 54 5e-15
ref|XP_006358437.1| PREDICTED: mitochondrial tRNA-specific 2-thi... 54 7e-15
gb|EOY32661.1| Transferases,tRNA-methyltransferases [Theobroma c... 54 1e-14
emb|CBI16383.3| unnamed protein product [Vitis vinifera] 53 1e-14
ref|XP_002282827.1| PREDICTED: tRNA-specific 2-thiouridylase mnm... 53 1e-14
>ref|XP_006649485.1| PREDICTED: mitochondrial tRNA-specific 2-thiouridylase 1-like
[Oryza brachyantha]
Length = 489
Score = 56.2 bits (134), Expect(2) = 2e-16
Identities = 25/28 (89%), Positives = 27/28 (96%)
Frame = +2
Query: 2 VKDQTYFLSHLSQTQLRRLIFPLGCTSK 85
VKDQTYFLSHLSQTQLRRL+FPLGC +K
Sbjct: 228 VKDQTYFLSHLSQTQLRRLLFPLGCITK 255
Score = 54.7 bits (130), Expect(2) = 2e-16
Identities = 24/29 (82%), Positives = 27/29 (93%)
Frame = +1
Query: 91 DEVRKLAKMLDLPNQERKDSQGICFLGKV 177
DEVR+LA +DLPNQ+RKDSQGICFLGKV
Sbjct: 256 DEVRRLAAQMDLPNQDRKDSQGICFLGKV 284
>gb|EEC74610.1| hypothetical protein OsI_10221 [Oryza sativa Indica Group]
Length = 488
Score = 56.2 bits (134), Expect(2) = 2e-16
Identities = 25/28 (89%), Positives = 27/28 (96%)
Frame = +2
Query: 2 VKDQTYFLSHLSQTQLRRLIFPLGCTSK 85
VKDQTYFLSHLSQTQLRRL+FPLGC +K
Sbjct: 227 VKDQTYFLSHLSQTQLRRLLFPLGCITK 254
Score = 54.7 bits (130), Expect(2) = 2e-16
Identities = 24/29 (82%), Positives = 27/29 (93%)
Frame = +1
Query: 91 DEVRKLAKMLDLPNQERKDSQGICFLGKV 177
DEVR+LA +DLPNQ+RKDSQGICFLGKV
Sbjct: 255 DEVRRLAAQMDLPNQDRKDSQGICFLGKV 283
>ref|NP_001049129.1| Os03g0174600 [Oryza sativa Japonica Group]
gi|108706458|gb|ABF94253.1| tRNA methyl transferase
family protein, expressed [Oryza sativa Japonica Group]
gi|113547600|dbj|BAF11043.1| Os03g0174600 [Oryza sativa
Japonica Group] gi|215737060|dbj|BAG95989.1| unnamed
protein product [Oryza sativa Japonica Group]
Length = 488
Score = 56.2 bits (134), Expect(2) = 2e-16
Identities = 25/28 (89%), Positives = 27/28 (96%)
Frame = +2
Query: 2 VKDQTYFLSHLSQTQLRRLIFPLGCTSK 85
VKDQTYFLSHLSQTQLRRL+FPLGC +K
Sbjct: 227 VKDQTYFLSHLSQTQLRRLLFPLGCITK 254
Score = 54.7 bits (130), Expect(2) = 2e-16
Identities = 24/29 (82%), Positives = 27/29 (93%)
Frame = +1
Query: 91 DEVRKLAKMLDLPNQERKDSQGICFLGKV 177
DEVR+LA +DLPNQ+RKDSQGICFLGKV
Sbjct: 255 DEVRRLAAQMDLPNQDRKDSQGICFLGKV 283
>gb|EEE58416.1| hypothetical protein OsJ_09614 [Oryza sativa Japonica Group]
Length = 410
Score = 56.2 bits (134), Expect(2) = 2e-16
Identities = 25/28 (89%), Positives = 27/28 (96%)
Frame = +2
Query: 2 VKDQTYFLSHLSQTQLRRLIFPLGCTSK 85
VKDQTYFLSHLSQTQLRRL+FPLGC +K
Sbjct: 227 VKDQTYFLSHLSQTQLRRLLFPLGCITK 254
Score = 54.7 bits (130), Expect(2) = 2e-16
Identities = 24/29 (82%), Positives = 27/29 (93%)
Frame = +1
Query: 91 DEVRKLAKMLDLPNQERKDSQGICFLGKV 177
DEVR+LA +DLPNQ+RKDSQGICFLGKV
Sbjct: 255 DEVRRLAAQMDLPNQDRKDSQGICFLGKV 283
>ref|XP_002894309.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Arabidopsis lyrata subsp. lyrata]
gi|297340151|gb|EFH70568.1| tRNA
(5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Arabidopsis lyrata subsp. lyrata]
Length = 500
Score = 55.8 bits (133), Expect(2) = 8e-16
Identities = 25/28 (89%), Positives = 26/28 (92%)
Frame = +2
Query: 2 VKDQTYFLSHLSQTQLRRLIFPLGCTSK 85
VKDQTYFLSHLSQTQL+RLIFPLGC K
Sbjct: 234 VKDQTYFLSHLSQTQLKRLIFPLGCVKK 261
Score = 53.1 bits (126), Expect(2) = 8e-16
Identities = 23/29 (79%), Positives = 26/29 (89%)
Frame = +1
Query: 91 DEVRKLAKMLDLPNQERKDSQGICFLGKV 177
DEVRKLA DLPN++RKDSQGICFLGK+
Sbjct: 262 DEVRKLATQFDLPNKDRKDSQGICFLGKI 290
>gb|EXB93298.1| tRNA-specific 2-thiouridylase mnmA [Morus notabilis]
Length = 580
Score = 55.1 bits (131), Expect(2) = 1e-15
Identities = 24/32 (75%), Positives = 28/32 (87%)
Frame = +2
Query: 2 VKDQTYFLSHLSQTQLRRLIFPLGCTSKVRMK 97
VKDQTYFLSHLSQ QL+RL+FPLGC SK ++
Sbjct: 279 VKDQTYFLSHLSQAQLKRLVFPLGCISKEEVR 310
Score = 53.5 bits (127), Expect(2) = 1e-15
Identities = 23/29 (79%), Positives = 27/29 (93%)
Frame = +1
Query: 91 DEVRKLAKMLDLPNQERKDSQGICFLGKV 177
+EVRKLAK DLPN++RKDSQGICFLGK+
Sbjct: 307 EEVRKLAKKFDLPNKDRKDSQGICFLGKI 335
>ref|NP_175542.2| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Arabidopsis thaliana] gi|332194528|gb|AEE32649.1| tRNA
(5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Arabidopsis thaliana]
Length = 497
Score = 55.1 bits (131), Expect(2) = 1e-15
Identities = 24/28 (85%), Positives = 26/28 (92%)
Frame = +2
Query: 2 VKDQTYFLSHLSQTQLRRLIFPLGCTSK 85
VKDQTYFLSHLSQTQL+RL+FPLGC K
Sbjct: 231 VKDQTYFLSHLSQTQLKRLLFPLGCVKK 258
Score = 53.1 bits (126), Expect(2) = 1e-15
Identities = 23/29 (79%), Positives = 26/29 (89%)
Frame = +1
Query: 91 DEVRKLAKMLDLPNQERKDSQGICFLGKV 177
DEVRKLA DLPN++RKDSQGICFLGK+
Sbjct: 259 DEVRKLATQFDLPNKDRKDSQGICFLGKI 287
>dbj|BAD95081.1| hypothetical protein [Arabidopsis thaliana]
Length = 497
Score = 55.1 bits (131), Expect(2) = 1e-15
Identities = 24/28 (85%), Positives = 26/28 (92%)
Frame = +2
Query: 2 VKDQTYFLSHLSQTQLRRLIFPLGCTSK 85
VKDQTYFLSHLSQTQL+RL+FPLGC K
Sbjct: 231 VKDQTYFLSHLSQTQLKRLLFPLGCVKK 258
Score = 53.1 bits (126), Expect(2) = 1e-15
Identities = 23/29 (79%), Positives = 26/29 (89%)
Frame = +1
Query: 91 DEVRKLAKMLDLPNQERKDSQGICFLGKV 177
DEVRKLA DLPN++RKDSQGICFLGK+
Sbjct: 259 DEVRKLATQFDLPNKDRKDSQGICFLGKI 287
>ref|XP_006307321.1| hypothetical protein CARUB_v10008942mg [Capsella rubella]
gi|482576032|gb|EOA40219.1| hypothetical protein
CARUB_v10008942mg [Capsella rubella]
Length = 496
Score = 55.1 bits (131), Expect(2) = 1e-15
Identities = 24/28 (85%), Positives = 26/28 (92%)
Frame = +2
Query: 2 VKDQTYFLSHLSQTQLRRLIFPLGCTSK 85
VKDQTYFLSHLSQTQL+RL+FPLGC K
Sbjct: 230 VKDQTYFLSHLSQTQLKRLLFPLGCVKK 257
Score = 53.1 bits (126), Expect(2) = 1e-15
Identities = 23/29 (79%), Positives = 26/29 (89%)
Frame = +1
Query: 91 DEVRKLAKMLDLPNQERKDSQGICFLGKV 177
DEVRKLA DLPN++RKDSQGICFLGK+
Sbjct: 258 DEVRKLATQFDLPNKDRKDSQGICFLGKI 286
>ref|XP_006280360.1| hypothetical protein CARUB_v10026287mg [Capsella rubella]
gi|482549064|gb|EOA13258.1| hypothetical protein
CARUB_v10026287mg [Capsella rubella]
Length = 494
Score = 55.1 bits (131), Expect(2) = 1e-15
Identities = 24/28 (85%), Positives = 26/28 (92%)
Frame = +2
Query: 2 VKDQTYFLSHLSQTQLRRLIFPLGCTSK 85
VKDQTYFLSHLSQTQL+RL+FPLGC K
Sbjct: 228 VKDQTYFLSHLSQTQLKRLLFPLGCVKK 255
Score = 53.1 bits (126), Expect(2) = 1e-15
Identities = 23/29 (79%), Positives = 26/29 (89%)
Frame = +1
Query: 91 DEVRKLAKMLDLPNQERKDSQGICFLGKV 177
DEVRKLA DLPN++RKDSQGICFLGK+
Sbjct: 256 DEVRKLATQFDLPNKDRKDSQGICFLGKI 284
>gb|AAD30642.1|AC006085_15 Unknown protein [Arabidopsis thaliana] gi|119935887|gb|ABM06024.1|
At1g51310 [Arabidopsis thaliana]
Length = 421
Score = 55.1 bits (131), Expect(2) = 1e-15
Identities = 24/28 (85%), Positives = 26/28 (92%)
Frame = +2
Query: 2 VKDQTYFLSHLSQTQLRRLIFPLGCTSK 85
VKDQTYFLSHLSQTQL+RL+FPLGC K
Sbjct: 155 VKDQTYFLSHLSQTQLKRLLFPLGCVKK 182
Score = 53.1 bits (126), Expect(2) = 1e-15
Identities = 23/29 (79%), Positives = 26/29 (89%)
Frame = +1
Query: 91 DEVRKLAKMLDLPNQERKDSQGICFLGKV 177
DEVRKLA DLPN++RKDSQGICFLGK+
Sbjct: 183 DEVRKLATQFDLPNKDRKDSQGICFLGKI 211
>ref|XP_004247484.1| PREDICTED: tRNA-specific 2-thiouridylase MnmA-like [Solanum
lycopersicum]
Length = 489
Score = 53.9 bits (128), Expect(2) = 2e-15
Identities = 27/33 (81%), Positives = 28/33 (84%), Gaps = 2/33 (6%)
Frame = +2
Query: 2 VKDQTYFLSHLSQTQLRRLIFPLGCTSK--VRM 94
VKDQTYFLSHLSQ QL+RLIFPLGC K VRM
Sbjct: 229 VKDQTYFLSHLSQAQLKRLIFPLGCIQKDEVRM 261
Score = 53.5 bits (127), Expect(2) = 2e-15
Identities = 24/29 (82%), Positives = 26/29 (89%)
Frame = +1
Query: 91 DEVRKLAKMLDLPNQERKDSQGICFLGKV 177
DEVR LAK +LPNQERKDSQGICFLGK+
Sbjct: 257 DEVRMLAKSFNLPNQERKDSQGICFLGKI 285
>ref|XP_006393065.1| hypothetical protein EUTSA_v10011432mg [Eutrema salsugineum]
gi|557089643|gb|ESQ30351.1| hypothetical protein
EUTSA_v10011432mg [Eutrema salsugineum]
Length = 488
Score = 55.5 bits (132), Expect(2) = 4e-15
Identities = 24/32 (75%), Positives = 28/32 (87%)
Frame = +2
Query: 2 VKDQTYFLSHLSQTQLRRLIFPLGCTSKVRMK 97
VKDQTYFLSHLSQTQL+RL+FPLGC K ++
Sbjct: 222 VKDQTYFLSHLSQTQLKRLLFPLGCVKKEEVR 253
Score = 51.2 bits (121), Expect(2) = 4e-15
Identities = 22/29 (75%), Positives = 26/29 (89%)
Frame = +1
Query: 91 DEVRKLAKMLDLPNQERKDSQGICFLGKV 177
+EVRKLA DLPN++RKDSQGICFLGK+
Sbjct: 250 EEVRKLATKFDLPNKDRKDSQGICFLGKI 278
>ref|XP_004985520.1| PREDICTED: mitochondrial tRNA-specific 2-thiouridylase 1-like
[Setaria italica]
Length = 488
Score = 53.5 bits (127), Expect(2) = 4e-15
Identities = 23/28 (82%), Positives = 25/28 (89%)
Frame = +2
Query: 2 VKDQTYFLSHLSQTQLRRLIFPLGCTSK 85
+KDQTYFLSHLSQ QLRRL+FPLGC K
Sbjct: 227 IKDQTYFLSHLSQAQLRRLLFPLGCIKK 254
Score = 53.1 bits (126), Expect(2) = 4e-15
Identities = 24/29 (82%), Positives = 26/29 (89%)
Frame = +1
Query: 91 DEVRKLAKMLDLPNQERKDSQGICFLGKV 177
DEVR+LA +DLPNQ RKDSQGICFLGKV
Sbjct: 255 DEVRRLAAQMDLPNQGRKDSQGICFLGKV 283
>gb|EMT11416.1| tRNA-specific 2-thiouridylase mnmA [Aegilops tauschii]
Length = 552
Score = 53.9 bits (128), Expect(2) = 5e-15
Identities = 24/28 (85%), Positives = 26/28 (92%)
Frame = +2
Query: 2 VKDQTYFLSHLSQTQLRRLIFPLGCTSK 85
VKDQTYFLSHLSQ QLRRL+FPLGC +K
Sbjct: 224 VKDQTYFLSHLSQPQLRRLLFPLGCITK 251
Score = 52.4 bits (124), Expect(2) = 5e-15
Identities = 24/29 (82%), Positives = 25/29 (86%)
Frame = +1
Query: 91 DEVRKLAKMLDLPNQERKDSQGICFLGKV 177
DEVR LA +DLPNQ RKDSQGICFLGKV
Sbjct: 252 DEVRSLAVQMDLPNQARKDSQGICFLGKV 280
>ref|XP_003558694.1| PREDICTED: tRNA-specific 2-thiouridylase mnmA-like [Brachypodium
distachyon]
Length = 481
Score = 53.9 bits (128), Expect(2) = 5e-15
Identities = 24/28 (85%), Positives = 26/28 (92%)
Frame = +2
Query: 2 VKDQTYFLSHLSQTQLRRLIFPLGCTSK 85
VKDQTYFLSHLSQ QLRRL+FPLGC +K
Sbjct: 220 VKDQTYFLSHLSQPQLRRLLFPLGCITK 247
Score = 52.4 bits (124), Expect(2) = 5e-15
Identities = 24/29 (82%), Positives = 25/29 (86%)
Frame = +1
Query: 91 DEVRKLAKMLDLPNQERKDSQGICFLGKV 177
DEVR LA +DLPNQ RKDSQGICFLGKV
Sbjct: 248 DEVRSLATQMDLPNQGRKDSQGICFLGKV 276
>ref|XP_006358437.1| PREDICTED: mitochondrial tRNA-specific 2-thiouridylase 1-like
[Solanum tuberosum]
Length = 488
Score = 53.5 bits (127), Expect(2) = 7e-15
Identities = 24/28 (85%), Positives = 25/28 (89%)
Frame = +2
Query: 2 VKDQTYFLSHLSQTQLRRLIFPLGCTSK 85
VKDQTYFLSHLSQ QL+RLIFPLGC K
Sbjct: 233 VKDQTYFLSHLSQAQLKRLIFPLGCIQK 260
Score = 52.4 bits (124), Expect(2) = 7e-15
Identities = 23/29 (79%), Positives = 26/29 (89%)
Frame = +1
Query: 91 DEVRKLAKMLDLPNQERKDSQGICFLGKV 177
DEVR LAK +LPNQ+RKDSQGICFLGK+
Sbjct: 261 DEVRTLAKSFNLPNQDRKDSQGICFLGKI 289
>gb|EOY32661.1| Transferases,tRNA-methyltransferases [Theobroma cacao]
Length = 1075
Score = 53.9 bits (128), Expect(2) = 1e-14
Identities = 24/28 (85%), Positives = 26/28 (92%)
Frame = +2
Query: 2 VKDQTYFLSHLSQTQLRRLIFPLGCTSK 85
VKDQTYFLSHLSQ QL+RLIFPLGC +K
Sbjct: 230 VKDQTYFLSHLSQAQLKRLIFPLGCLAK 257
Score = 51.2 bits (121), Expect(2) = 1e-14
Identities = 22/29 (75%), Positives = 26/29 (89%)
Frame = +1
Query: 91 DEVRKLAKMLDLPNQERKDSQGICFLGKV 177
DEVR+LA DLPN++RKDSQGICFLGK+
Sbjct: 258 DEVRQLAAKFDLPNKDRKDSQGICFLGKI 286
>emb|CBI16383.3| unnamed protein product [Vitis vinifera]
Length = 544
Score = 52.8 bits (125), Expect(2) = 1e-14
Identities = 24/28 (85%), Positives = 25/28 (89%)
Frame = +2
Query: 2 VKDQTYFLSHLSQTQLRRLIFPLGCTSK 85
VKDQTYFLSHLSQ QL+RLIFPLGC K
Sbjct: 237 VKDQTYFLSHLSQIQLKRLIFPLGCIPK 264
Score = 52.4 bits (124), Expect(2) = 1e-14
Identities = 23/29 (79%), Positives = 26/29 (89%)
Frame = +1
Query: 91 DEVRKLAKMLDLPNQERKDSQGICFLGKV 177
DEVR LA LDLPN++RKDSQGICFLGK+
Sbjct: 265 DEVRSLATKLDLPNRDRKDSQGICFLGKI 293
>ref|XP_002282827.1| PREDICTED: tRNA-specific 2-thiouridylase mnmA-like [Vitis vinifera]
Length = 540
Score = 52.8 bits (125), Expect(2) = 1e-14
Identities = 24/28 (85%), Positives = 25/28 (89%)
Frame = +2
Query: 2 VKDQTYFLSHLSQTQLRRLIFPLGCTSK 85
VKDQTYFLSHLSQ QL+RLIFPLGC K
Sbjct: 233 VKDQTYFLSHLSQIQLKRLIFPLGCIPK 260
Score = 52.4 bits (124), Expect(2) = 1e-14
Identities = 23/29 (79%), Positives = 26/29 (89%)
Frame = +1
Query: 91 DEVRKLAKMLDLPNQERKDSQGICFLGKV 177
DEVR LA LDLPN++RKDSQGICFLGK+
Sbjct: 261 DEVRSLATKLDLPNRDRKDSQGICFLGKI 289