BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00019346
         (777 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulga...   162   5e-45
emb|CAB10337.1| reverse transcriptase like protein [Arabidopsis ...   164   1e-43
dbj|BAE79385.1| unnamed protein product [Ipomoea batatas]             137   1e-42
dbj|BAE79382.1| unnamed protein product [Ipomoea batatas]             137   1e-42
dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]             133   2e-41
gb|AAC63844.1| putative non-LTR retroelement reverse transcripta...   140   2e-39
ref|XP_006490008.1| PREDICTED: uncharacterized protein LOC102624...   150   7e-39
gb|ABD28627.2| RNA-directed DNA polymerase (Reverse transcriptas...   148   2e-38
gb|ABO80459.1| RNA-directed DNA polymerase (Reverse transcriptas...   147   1e-37
gb|EMJ14411.1| hypothetical protein PRUPE_ppb013620mg [Prunus pe...   135   5e-37
ref|XP_004289445.1| PREDICTED: putative ribonuclease H protein A...   148   5e-37
gb|ABD28505.2| RNA-directed DNA polymerase (Reverse transcriptas...   121   7e-36
gb|EOY02376.1| LINE-type retrotransposon LIb DNA, Insertion at t...   138   6e-35
gb|EMJ08998.1| hypothetical protein PRUPE_ppa024472mg, partial [...   124   1e-33
ref|XP_006480844.1| PREDICTED: putative ribonuclease H protein A...   110   1e-32
gb|AAC26674.1| putative non-LTR retroelement reverse transcripta...   127   1e-32
gb|EPS72636.1| hypothetical protein M569_02121, partial [Genlise...   120   1e-31
emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulga...   140   4e-31
gb|AAD29058.1| putative non-LTR retroelement reverse transcripta...   123   5e-31
gb|AAG13524.1|AC068924_29 putative non-LTR retroelement reverse ...   121   6e-31

>emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1378

 Score =  162 bits (410), Expect(2) = 5e-45
 Identities = 77/164 (46%), Positives = 110/164 (67%), Gaps = 2/164 (1%)
 Frame = +3

Query: 3    VTKII--RVKSLIDKLVLENQASFILNRQASDNIVILQEMIYCMQKKMGRKRTMTIKVDL 176
            VTK+I  R+K ++  L+   Q SF+ NRQ +DN++I+QEM + M+ K G+K  M +K+D 
Sbjct: 524  VTKVIINRLKPILPSLISPTQCSFVPNRQITDNVIIVQEMFHSMRNKQGKKGFMAVKIDF 583

Query: 177  EKAYDHIEWDFLQMVLEEVEFREKLIKIIMFCVSSTKLSLLWNGDKLEPFTPNRGLRQGD 356
            EKAYD + W F++  L E+   + L+ I+M CVSS  L +LWNG+ +E   P RGLRQGD
Sbjct: 584  EKAYDRLRWTFIRESLMELRIPQHLVDIVMNCVSSANLQILWNGEPMEKICPTRGLRQGD 643

Query: 357  RLSPYPFVLCMEVLGKRMNKAKAYGIWKGVKASRHGPSIPHIFF 488
             LSPY +V+CME L   +++    G WK VKASR+GP I ++ F
Sbjct: 644  PLSPYLYVICMERLAHLIDQEVTNGNWKPVKASRNGPPISNLAF 687



 Score = 46.2 bits (108), Expect(2) = 5e-45
 Identities = 21/72 (29%), Positives = 43/72 (59%)
 Frame = +1

Query: 559 KFCKESGQKIDTHKSKLFSSKNTLARLRASLSQQFEILETDDLEIYLGLPVLHGRITRKF 738
           +FC+ SG K++  KSK++ S NT   +R ++     +  T D   YLG+P ++GR +++ 
Sbjct: 711 RFCEASGSKVNEDKSKIYFSANTHLDIRDAVCNTLAMEATADFGKYLGVPTINGRSSKR- 769

Query: 739 FFDFILSKVRKK 774
            + +++ ++  K
Sbjct: 770 EYQYLVDRINGK 781


>emb|CAB10337.1| reverse transcriptase like protein [Arabidopsis thaliana]
           gi|7268307|emb|CAB78601.1| reverse transcriptase like
           protein [Arabidopsis thaliana]
          Length = 929

 Score =  164 bits (416), Expect(2) = 1e-43
 Identities = 81/159 (50%), Positives = 108/159 (67%)
 Frame = +3

Query: 12  IIRVKSLIDKLVLENQASFILNRQASDNIVILQEMIYCMQKKMGRKRTMTIKVDLEKAYD 191
           +IR+K++I KL+   QASFI  R + DNIV++QE ++ M++K GRK  M +K+DLEKAYD
Sbjct: 338 VIRLKNVISKLIGPAQASFIPGRLSFDNIVVVQEAVHSMRRKKGRKGWMLLKLDLEKAYD 397

Query: 192 HIEWDFLQMVLEEVEFREKLIKIIMFCVSSTKLSLLWNGDKLEPFTPNRGLRQGDRLSPY 371
            I WDFL   LE     E  IK IM CV+  ++SLLWNG+K + FTP RGLRQGD +SPY
Sbjct: 398 RIRWDFLAETLEAAGLSEGWIKRIMECVAGPEMSLLWNGEKTDSFTPERGLRQGDPISPY 457

Query: 372 PFVLCMEVLGKRMNKAKAYGIWKGVKASRHGPSIPHIFF 488
            FVLC+E L  ++  A   G WK +  S+ GP + H+ F
Sbjct: 458 LFVLCIERLCHQIETAVGRGDWKSISISQGGPKVSHVCF 496



 Score = 39.3 bits (90), Expect(2) = 1e-43
 Identities = 23/65 (35%), Positives = 35/65 (53%)
 Frame = +1

Query: 580 QKIDTHKSKLFSSKNTLARLRASLSQQFEILETDDLEIYLGLPVLHGRITRKFFFDFILS 759
           QK+   KSK+F S N    L   ++ +  I  T +L  YLG+PVL  RI +  F + +L 
Sbjct: 510 QKVSLEKSKIFFSNNVSRDLEGLITAETGIGSTRELGKYLGMPVLQKRINKDTFGE-VLE 568

Query: 760 KVRKK 774
           +V  +
Sbjct: 569 RVSSR 573


>dbj|BAE79385.1| unnamed protein product [Ipomoea batatas]
          Length = 1366

 Score =  137 bits (344), Expect(3) = 1e-42
 Identities = 64/164 (39%), Positives = 102/164 (62%), Gaps = 2/164 (1%)
 Frame = +3

Query: 3    VTKII--RVKSLIDKLVLENQASFILNRQASDNIVILQEMIYCMQKKMGRKRTMTIKVDL 176
            ++K++  R++ ++  ++  +Q SF+  R   DN+++ QE+++ M     +K+ M +KVDL
Sbjct: 522  ISKVLVNRLRPIMSNIIGPHQNSFLPGRSTMDNVILTQEVVHSMNNPRRKKKQMILKVDL 581

Query: 177  EKAYDHIEWDFLQMVLEEVEFREKLIKIIMFCVSSTKLSLLWNGDKLEPFTPNRGLRQGD 356
            +KAYD + WD+L+  LE+  F  +LI +I+F +  + L++LWNG +L PF P RGLRQGD
Sbjct: 582  QKAYDSVSWDYLEETLEDFGFPRRLIDLILFSLQESSLAILWNGGRLPPFKPGRGLRQGD 641

Query: 357  RLSPYPFVLCMEVLGKRMNKAKAYGIWKGVKASRHGPSIPHIFF 488
             L+PY F L ME L   +        WK V  +R G  I H+FF
Sbjct: 642  PLAPYLFNLVMERLAHDIQTRVNARTWKPVHITRGGTGISHLFF 685



 Score = 44.7 bits (104), Expect(3) = 1e-42
 Identities = 24/71 (33%), Positives = 40/71 (56%)
 Frame = +1

Query: 562 FCKESGQKIDTHKSKLFSSKNTLARLRASLSQQFEILETDDLEIYLGLPVLHGRITRKFF 741
           F   SG K++  KS LF S N  A L+ ++    ++   + L  YLG+P+L  R++R   
Sbjct: 710 FSNASGLKVNFSKSLLFCSSNVNAGLKRAIGSILQVPVAESLGTYLGIPMLKERVSRN-T 768

Query: 742 FDFILSKVRKK 774
           F+ ++ K+R K
Sbjct: 769 FNAVIDKMRTK 779



 Score = 39.3 bits (90), Expect(3) = 1e-42
 Identities = 17/31 (54%), Positives = 24/31 (77%)
 Frame = +2

Query: 476 THLFFVNDLILFGEASREQAQVMAAKTENFA 568
           +HLFF +DL+LFGEAS  QAQ+M    ++F+
Sbjct: 681 SHLFFADDLMLFGEASEHQAQIMFDCLDSFS 711


>dbj|BAE79382.1| unnamed protein product [Ipomoea batatas]
          Length = 1366

 Score =  137 bits (344), Expect(3) = 1e-42
 Identities = 64/164 (39%), Positives = 102/164 (62%), Gaps = 2/164 (1%)
 Frame = +3

Query: 3    VTKII--RVKSLIDKLVLENQASFILNRQASDNIVILQEMIYCMQKKMGRKRTMTIKVDL 176
            ++K++  R++ ++  ++  +Q SF+  R   DN+++ QE+++ M     +K+ M +KVDL
Sbjct: 522  ISKVLVNRLRPIMSNIIGPHQNSFLPGRSTMDNVILTQEVVHSMNNPRRKKKQMILKVDL 581

Query: 177  EKAYDHIEWDFLQMVLEEVEFREKLIKIIMFCVSSTKLSLLWNGDKLEPFTPNRGLRQGD 356
            +KAYD + WD+L+  LE+  F  +LI +I+F +  + L++LWNG +L PF P RGLRQGD
Sbjct: 582  QKAYDSVSWDYLEETLEDFGFPRRLIDLILFSLQESSLAILWNGGRLPPFKPGRGLRQGD 641

Query: 357  RLSPYPFVLCMEVLGKRMNKAKAYGIWKGVKASRHGPSIPHIFF 488
             L+PY F L ME L   +        WK V  +R G  I H+FF
Sbjct: 642  PLAPYLFNLVMERLAHDIQTRVNARTWKPVHITRGGTGISHLFF 685



 Score = 44.7 bits (104), Expect(3) = 1e-42
 Identities = 24/71 (33%), Positives = 40/71 (56%)
 Frame = +1

Query: 562 FCKESGQKIDTHKSKLFSSKNTLARLRASLSQQFEILETDDLEIYLGLPVLHGRITRKFF 741
           F   SG K++  KS LF S N  A L+ ++    ++   + L  YLG+P+L  R++R   
Sbjct: 710 FSNASGLKVNFSKSLLFCSSNVNAGLKRAIGSILQVPVAESLGTYLGIPMLKERVSRN-T 768

Query: 742 FDFILSKVRKK 774
           F+ ++ K+R K
Sbjct: 769 FNAVIDKMRTK 779



 Score = 39.3 bits (90), Expect(3) = 1e-42
 Identities = 17/31 (54%), Positives = 24/31 (77%)
 Frame = +2

Query: 476 THLFFVNDLILFGEASREQAQVMAAKTENFA 568
           +HLFF +DL+LFGEAS  QAQ+M    ++F+
Sbjct: 681 SHLFFADDLMLFGEASEHQAQIMFDCLDSFS 711


>dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]
          Length = 1898

 Score =  133 bits (334), Expect(3) = 2e-41
 Identities = 63/164 (38%), Positives = 100/164 (60%), Gaps = 2/164 (1%)
 Frame = +3

Query: 3    VTKII--RVKSLIDKLVLENQASFILNRQASDNIVILQEMIYCMQKKMGRKRTMTIKVDL 176
            ++K++  R++ ++  ++  +Q SF+  R   DN+++ QE+++ M     +K+ M +KVDL
Sbjct: 1054 ISKVLVNRLRPIMSNIIGPHQNSFLPGRSTMDNVILTQEVVHSMNNPRRKKKQMILKVDL 1113

Query: 177  EKAYDHIEWDFLQMVLEEVEFREKLIKIIMFCVSSTKLSLLWNGDKLEPFTPNRGLRQGD 356
            +KAYD + WD+L+  LE+  F  +LI +I+F +  + L++LWNG +  PF P RGLRQGD
Sbjct: 1114 QKAYDSVSWDYLEETLEDFGFPRRLIDLILFSLQESSLAILWNGGRPPPFKPGRGLRQGD 1173

Query: 357  RLSPYPFVLCMEVLGKRMNKAKAYGIWKGVKASRHGPSIPHIFF 488
             L PY F L ME L   +        WK V  +R G  I H+FF
Sbjct: 1174 PLVPYLFNLVMERLAHDIQTRVNARTWKPVHITRGGTGISHLFF 1217



 Score = 44.3 bits (103), Expect(3) = 2e-41
 Identities = 24/71 (33%), Positives = 40/71 (56%)
 Frame = +1

Query: 562  FCKESGQKIDTHKSKLFSSKNTLARLRASLSQQFEILETDDLEIYLGLPVLHGRITRKFF 741
            F   SG K++  KS LF S N  A L+ ++    ++   + L  YLG+P+L  R++R   
Sbjct: 1242 FSDASGLKVNFSKSLLFCSSNVNAGLKRAIGSILQVPVAESLGTYLGIPMLKERVSRN-T 1300

Query: 742  FDFILSKVRKK 774
            F+ ++ K+R K
Sbjct: 1301 FNAVIDKMRTK 1311



 Score = 39.3 bits (90), Expect(3) = 2e-41
 Identities = 17/31 (54%), Positives = 24/31 (77%)
 Frame = +2

Query: 476  THLFFVNDLILFGEASREQAQVMAAKTENFA 568
            +HLFF +DL+LFGEAS  QAQ+M    ++F+
Sbjct: 1213 SHLFFADDLMLFGEASEHQAQIMFDCLDSFS 1243


>gb|AAC63844.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1231

 Score =  140 bits (354), Expect(2) = 2e-39
 Identities = 72/159 (45%), Positives = 99/159 (62%)
 Frame = +3

Query: 12  IIRVKSLIDKLVLENQASFILNRQASDNIVILQEMIYCMQKKMGRKRTMTIKVDLEKAYD 191
           + R+K++I KL+   QASFI  R + DNIV++QE ++ M++K GRK  M +K+DLEKAYD
Sbjct: 386 VTRLKNVISKLIGPAQASFIPGRLSIDNIVLVQEAVHSMRRKKGRKGWMLLKLDLEKAYD 445

Query: 192 HIEWDFLQMVLEEVEFREKLIKIIMFCVSSTKLSLLWNGDKLEPFTPNRGLRQGDRLSPY 371
            + WDFLQ  LE     E     IM  V+   +S+LWNG++ + F P RGLRQGD LSPY
Sbjct: 446 RVRWDFLQETLEAAGLSEGWTSRIMAGVTDPSMSVLWNGERTDSFVPARGLRQGDPLSPY 505

Query: 372 PFVLCMEVLGKRMNKAKAYGIWKGVKASRHGPSIPHIFF 488
            FVLC+E L   +  +     WK +  S  G  + H+ F
Sbjct: 506 LFVLCLERLCHLIEASVGKREWKPIAVSCGGSKLSHVCF 544



 Score = 48.9 bits (115), Expect(2) = 2e-39
 Identities = 23/61 (37%), Positives = 37/61 (60%)
 Frame = +1

Query: 559 KFCKESGQKIDTHKSKLFSSKNTLARLRASLSQQFEILETDDLEIYLGLPVLHGRITRKF 738
           +FC+ SGQK+   KSK+F S N    +   +S++  I  T +L  YLG+P+L  R+ ++ 
Sbjct: 568 RFCEASGQKVSLEKSKIFFSHNVSREMEQLISEESGIGCTKELGKYLGMPILQKRMNKET 627

Query: 739 F 741
           F
Sbjct: 628 F 628


>ref|XP_006490008.1| PREDICTED: uncharacterized protein LOC102624085 [Citrus sinensis]
          Length = 1635

 Score =  150 bits (379), Expect(2) = 7e-39
 Identities = 71/164 (43%), Positives = 110/164 (67%), Gaps = 2/164 (1%)
 Frame = +3

Query: 3    VTKII--RVKSLIDKLVLENQASFILNRQASDNIVILQEMIYCMQKKMGRKRTMTIKVDL 176
            +TKII  R++ L+ +L+  +Q SF+  R  ++NI++ QE+I+ M++K GRK  M IKVDL
Sbjct: 1014 ITKIIANRLQELLPELIGPHQTSFVPGRHITENIIVAQEIIHSMRRKKGRKGFMAIKVDL 1073

Query: 177  EKAYDHIEWDFLQMVLEEVEFREKLIKIIMFCVSSTKLSLLWNGDKLEPFTPNRGLRQGD 356
             KAYD + W F+Q  L+E+     LI +IM C+++  +++LWNG+    F P RG+RQGD
Sbjct: 1074 GKAYDRLSWTFIQETLQELNLPTMLINLIMECITTATMNVLWNGELSSEFCPGRGVRQGD 1133

Query: 357  RLSPYPFVLCMEVLGKRMNKAKAYGIWKGVKASRHGPSIPHIFF 488
             LSPY FVLC+E L   ++++   G WK ++ +R G  + H+FF
Sbjct: 1134 PLSPYIFVLCIERLSHGISRSIQQGHWKPIRLARMGTPLSHLFF 1177



 Score = 37.4 bits (85), Expect(2) = 7e-39
 Identities = 18/61 (29%), Positives = 33/61 (54%)
 Frame = +1

Query: 559  KFCKESGQKIDTHKSKLFSSKNTLARLRASLSQQFEILETDDLEIYLGLPVLHGRITRKF 738
            +F   SG K++  K+ ++ S N  A   + +        TD+L  YLG+P+ H RI+++ 
Sbjct: 1201 EFSASSGAKVNKSKTLVYFSANISAMEASRIGSDLGYSVTDNLGKYLGVPLCHSRISKQT 1260

Query: 739  F 741
            +
Sbjct: 1261 Y 1261


>gb|ABD28627.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H
            [Medicago truncatula]
          Length = 1296

 Score =  148 bits (373), Expect(2) = 2e-38
 Identities = 70/164 (42%), Positives = 105/164 (64%), Gaps = 2/164 (1%)
 Frame = +3

Query: 3    VTKII--RVKSLIDKLVLENQASFILNRQASDNIVILQEMIYCMQKKMGRKRTMTIKVDL 176
            +TK++  R++  ++ L+   Q+SF+  R  +DN +ILQE+++ M++   +K  +  K+DL
Sbjct: 520  ITKVLVHRLRPFLNNLIGPYQSSFLPGRGTADNSIILQEILHFMKRSKRKKGYVAFKLDL 579

Query: 177  EKAYDHIEWDFLQMVLEEVEFREKLIKIIMFCVSSTKLSLLWNGDKLEPFTPNRGLRQGD 356
            EKA+D++ WDFL   L +  F + ++K+IM CVSS   SLLWNG+K+ PF P  GLRQGD
Sbjct: 580  EKAFDNVNWDFLNSCLLDFGFPDIIVKLIMHCVSSANYSLLWNGNKMPPFKPTHGLRQGD 639

Query: 357  RLSPYPFVLCMEVLGKRMNKAKAYGIWKGVKASRHGPSIPHIFF 488
             LSPY F+LCME L   +  A   G W+ +     GP I H+ F
Sbjct: 640  PLSPYLFILCMEKLSVAIQDAVLQGSWEPIHIINDGPQISHLLF 683



 Score = 38.1 bits (87), Expect(2) = 2e-38
 Identities = 25/72 (34%), Positives = 39/72 (54%)
 Frame = +1

Query: 559 KFCKESGQKIDTHKSKLFSSKNTLARLRASLSQQFEILETDDLEIYLGLPVLHGRITRKF 738
           +F + SG KI+  KS+ + S  T      +L+    I  T  L  YLG P+L GR  ++ 
Sbjct: 707 RFSRASGLKINISKSRAYYSSGTPNGKINNLTAISGIQSTTTLGKYLGFPMLQGR-PKRS 765

Query: 739 FFDFILSKVRKK 774
            F+FIL K++ +
Sbjct: 766 DFNFILEKMQTR 777


>gb|ABO80459.1| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H
           [Medicago truncatula]
          Length = 869

 Score =  147 bits (371), Expect(2) = 1e-37
 Identities = 67/164 (40%), Positives = 109/164 (66%), Gaps = 2/164 (1%)
 Frame = +3

Query: 3   VTKII--RVKSLIDKLVLENQASFILNRQASDNIVILQEMIYCMQKKMGRKRTMTIKVDL 176
           +TK+I  R++ +++ ++   Q+SF+  R  SDN ++LQE+++ M++   +K  +  K+DL
Sbjct: 80  ITKVIVHRLRPILNDIIGPYQSSFLQGRGTSDNSIVLQEIVHFMRRSKRKKGYVAFKLDL 139

Query: 177 EKAYDHIEWDFLQMVLEEVEFREKLIKIIMFCVSSTKLSLLWNGDKLEPFTPNRGLRQGD 356
           EKA+D++ W+FL+  L++  F +  IK+IM CV+S+  S+LWNG+K  P  P  GLRQGD
Sbjct: 140 EKAFDNVNWEFLRSCLQDFGFPDDTIKLIMHCVTSSTFSVLWNGNKWPPIKPTHGLRQGD 199

Query: 357 RLSPYPFVLCMEVLGKRMNKAKAYGIWKGVKASRHGPSIPHIFF 488
            LSPY F++CME L   +NKA   G W+ ++ S   P + H+ F
Sbjct: 200 PLSPYLFIICMEKLSLAINKAVHEGEWEPIRMSASSPPLSHLLF 243



 Score = 36.2 bits (82), Expect(2) = 1e-37
 Identities = 26/72 (36%), Positives = 37/72 (51%)
 Frame = +1

Query: 559 KFCKESGQKIDTHKSKLFSSKNTLARLRASLSQQFEILETDDLEIYLGLPVLHGRITRKF 738
           +F K  G KI+  KS+ F S     ++  +L+    I  T  L  YLG P+L GR  R  
Sbjct: 267 RFSKALGLKINLSKSRAFYSGVPHQKI-INLTSISGIRSTTSLGKYLGFPILKGRPKRSD 325

Query: 739 FFDFILSKVRKK 774
           F  FI+ K+R +
Sbjct: 326 FL-FIIEKMRNR 336


>gb|EMJ14411.1| hypothetical protein PRUPE_ppb013620mg [Prunus persica]
          Length = 993

 Score =  135 bits (340), Expect(2) = 5e-37
 Identities = 64/151 (42%), Positives = 94/151 (62%)
 Frame = +3

Query: 36   DKLVLENQASFILNRQASDNIVILQEMIYCMQKKMGRKRTMTIKVDLEKAYDHIEWDFLQ 215
            D   +   +SF+  R  +DNI+I QE+++  +   G+KR    K+DL KAYD + W F++
Sbjct: 745  DIYTMSQSSSFVPGRHITDNIMIAQELMHKFKLAKGKKRMFAWKIDLSKAYDRLNWGFIE 804

Query: 216  MVLEEVEFREKLIKIIMFCVSSTKLSLLWNGDKLEPFTPNRGLRQGDRLSPYPFVLCMEV 395
             VL EV      I++IM CVS+ +  +  NG+  +PF+P  G+RQGD LSPY FVLC+E 
Sbjct: 805  SVLLEVGLPNSFIQLIMQCVSTMRYQICINGELTDPFSPGNGIRQGDPLSPYLFVLCIEK 864

Query: 396  LGKRMNKAKAYGIWKGVKASRHGPSIPHIFF 488
            L   +  A    +WK +K SR+GPS+ H+FF
Sbjct: 865  LSHIIVDAVKRKLWKPIKTSRNGPSVSHLFF 895



 Score = 46.2 bits (108), Expect(2) = 5e-37
 Identities = 26/71 (36%), Positives = 40/71 (56%)
 Frame = +1

Query: 562  FCKESGQKIDTHKSKLFSSKNTLARLRASLSQQFEILETDDLEIYLGLPVLHGRITRKFF 741
            FC  SGQ ++  KS +F S NT   +   +        T++L  YLGLP+LH R+T K  
Sbjct: 920  FCSASGQAVNFAKSVIFCSPNTCKMVAKEIGAICGSPITENLGKYLGLPLLHSRVT-KVT 978

Query: 742  FDFILSKVRKK 774
            ++ +L KV+ +
Sbjct: 979  YNGLLDKVQSR 989


>ref|XP_004289445.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 719

 Score =  148 bits (373), Expect(2) = 5e-37
 Identities = 69/164 (42%), Positives = 103/164 (62%), Gaps = 2/164 (1%)
 Frame = +3

Query: 3   VTKII--RVKSLIDKLVLENQASFILNRQASDNIVILQEMIYCMQKKMGRKRTMTIKVDL 176
           ++KII  R++  + +L++ NQ S++  R  SDNI+I QE+++  +K  G       KVDL
Sbjct: 133 ISKIIVARIRPFMQQLIIPNQVSYVPGRHISDNIMIAQELLFKFKKSCGSLGFFAWKVDL 192

Query: 177 EKAYDHIEWDFLQMVLEEVEFREKLIKIIMFCVSSTKLSLLWNGDKLEPFTPNRGLRQGD 356
            KAYD + W F++ +L E +F   L+K+IM C+++T   + +NG+    F   RG+RQGD
Sbjct: 193 SKAYDRLRWSFIEQILFEAKFPSTLVKLIMSCITTTSFQICFNGELTSSFKAQRGIRQGD 252

Query: 357 RLSPYPFVLCMEVLGKRMNKAKAYGIWKGVKASRHGPSIPHIFF 488
            LSPY FVLCME L   +N     G WK V+AS+ GP + H+FF
Sbjct: 253 PLSPYIFVLCMEKLSHLINSVVDMGYWKPVRASQSGPKVSHLFF 296



 Score = 33.5 bits (75), Expect(2) = 5e-37
 Identities = 14/30 (46%), Positives = 22/30 (73%)
 Frame = +2

Query: 476 THLFFVNDLILFGEASREQAQVMAAKTENF 565
           +HLFF +DL+LF EAS +QA ++    ++F
Sbjct: 292 SHLFFADDLMLFAEASPQQASIIKDCLDSF 321


>gb|ABD28505.2| RNA-directed DNA polymerase (Reverse transcriptase);
           Polynucleotidyl transferase, Ribonuclease H fold
           [Medicago truncatula]
          Length = 729

 Score =  121 bits (304), Expect(3) = 7e-36
 Identities = 56/111 (50%), Positives = 75/111 (67%)
 Frame = +3

Query: 156 MTIKVDLEKAYDHIEWDFLQMVLEEVEFREKLIKIIMFCVSSTKLSLLWNGDKLEPFTPN 335
           MTIK+DLEKAYD + W+F++  L+E +F  KLI II  C+S+    ++WNGDK E F P+
Sbjct: 1   MTIKIDLEKAYDLLNWNFVEECLKECKFPSKLINIIHHCISTPSYKIMWNGDKSESFYPS 60

Query: 336 RGLRQGDRLSPYPFVLCMEVLGKRMNKAKAYGIWKGVKASRHGPSIPHIFF 488
           RG+RQGD LSPY FV+CME L   +        WK ++A R+GP I H+ F
Sbjct: 61  RGIRQGDPLSPYLFVICMERLSHIIADQVEADYWKPMRAGRYGPPISHLLF 111



 Score = 46.2 bits (108), Expect(3) = 7e-36
 Identities = 25/71 (35%), Positives = 41/71 (57%)
 Frame = +1

Query: 562 FCKESGQKIDTHKSKLFSSKNTLARLRASLSQQFEILETDDLEIYLGLPVLHGRITRKFF 741
           FC+ SGQKI+  K++++ SKN    LR  + Q     + + L  YLG  +  GR T +  
Sbjct: 136 FCQSSGQKINREKTQVYFSKNVDNHLREDIIQHTGFNQVNSLGKYLGANITPGR-TSRGH 194

Query: 742 FDFILSKVRKK 774
           F+ I++K++ K
Sbjct: 195 FNHIINKIQNK 205



 Score = 30.4 bits (67), Expect(3) = 7e-36
 Identities = 14/37 (37%), Positives = 22/37 (59%)
 Frame = +2

Query: 476 THLFFVNDLILFGEASREQAQVMAAKTENFAKKVAKR 586
           +HL F +DL+LF EAS EQA  +    + F +   ++
Sbjct: 107 SHLLFADDLLLFAEASIEQAHCVLHCLDMFCQSSGQK 143


>gb|EOY02376.1| LINE-type retrotransposon LIb DNA, Insertion at the S11 site-like
           protein [Theobroma cacao]
          Length = 620

 Score =  138 bits (348), Expect(2) = 6e-35
 Identities = 63/158 (39%), Positives = 101/158 (63%)
 Frame = +3

Query: 18  RVKSLIDKLVLENQASFILNRQASDNIVILQEMIYCMQKKMGRKRTMTIKVDLEKAYDHI 197
           R+K  ++ L+ E QASFIL     DNI+++QE+++   +K GR+  M +K+DLEKAYD +
Sbjct: 102 RLKPFMNLLIEETQASFILETHIVDNIIVVQEVVHSFHEKQGRRGWMMVKIDLEKAYDRL 161

Query: 198 EWDFLQMVLEEVEFREKLIKIIMFCVSSTKLSLLWNGDKLEPFTPNRGLRQGDRLSPYPF 377
            W+F+   L E +  E +I I++   ++    +LWNG   E F P+RG+R GD L+PY F
Sbjct: 162 RWEFIYDSLVEAQIPENIIDILIRSWNAHSSHILWNGTCFEKFFPSRGVRLGDPLAPYLF 221

Query: 378 VLCMEVLGKRMNKAKAYGIWKGVKASRHGPSIPHIFFL 491
           VLC+E L   + +A    +WK ++  +HGP + ++FF+
Sbjct: 222 VLCIEKLAHGIKQAVEQEMWKPIRLGKHGPPLTYLFFM 259



 Score = 36.2 bits (82), Expect(2) = 6e-35
 Identities = 22/71 (30%), Positives = 33/71 (46%)
 Frame = +1

Query: 562 FCKESGQKIDTHKSKLFSSKNTLARLRASLSQQFEILETDDLEIYLGLPVLHGRITRKFF 741
           FC     K+   KS  F SKN    L   +        +D +  Y+G+P+LHGR T    
Sbjct: 283 FCACLRGKVCIAKSTFFCSKNVPMELNIKVKDCSGFSYSDSMGKYIGVPLLHGRKT-AHI 341

Query: 742 FDFILSKVRKK 774
           +  ++ KVR +
Sbjct: 342 YKSLIDKVRSR 352


>gb|EMJ08998.1| hypothetical protein PRUPE_ppa024472mg, partial [Prunus persica]
          Length = 920

 Score =  124 bits (312), Expect(2) = 1e-33
 Identities = 64/158 (40%), Positives = 98/158 (62%), Gaps = 1/158 (0%)
 Frame = +3

Query: 18  RVKSLIDKLVLENQASFILNRQASDNIVILQEMIYCMQ-KKMGRKRTMTIKVDLEKAYDH 194
           R+ SL+  L+  NQ +F+ +R   DNI I  E  + ++ K  G +  + +KVD+ KAYD 
Sbjct: 105 RLSSLLPFLISPNQNAFVADRVIQDNISIAHEAYHHLKLKTRGSRHELGLKVDMNKAYDR 164

Query: 195 IEWDFLQMVLEEVEFREKLIKIIMFCVSSTKLSLLWNGDKLEPFTPNRGLRQGDRLSPYP 374
           +EWDFL+ +L ++ F +  +++IM CVSS   S+L NG     F P+RGLRQGD LSPY 
Sbjct: 165 VEWDFLEALLCKLGFCDHWVRLIMACVSSVSYSVLINGKPGPTFRPSRGLRQGDPLSPYL 224

Query: 375 FVLCMEVLGKRMNKAKAYGIWKGVKASRHGPSIPHIFF 488
           F+L  +V  K ++K  + G  KG+K ++  P + H+ F
Sbjct: 225 FLLVSDVFSKNLSKCISGGWIKGIKMAQRSPVLSHLLF 262



 Score = 45.8 bits (107), Expect(2) = 1e-33
 Identities = 23/72 (31%), Positives = 42/72 (58%)
 Frame = +1

Query: 559 KFCKESGQKIDTHKSKLFSSKNTLARLRASLSQQFEILETDDLEIYLGLPVLHGRITRKF 738
           ++C  SGQ ++  KS L+ S NT A L+ ++     +  TD+   YLG+P + GR ++K 
Sbjct: 286 RYCAASGQLVNHEKSCLYFSSNTPAELKTTIGSILAVEGTDNPGNYLGMPTMWGR-SKKA 344

Query: 739 FFDFILSKVRKK 774
             +++  +V+ K
Sbjct: 345 AMNYVKERVKDK 356


>ref|XP_006480844.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
           sinensis]
          Length = 768

 Score =  110 bits (276), Expect(3) = 1e-32
 Identities = 51/111 (45%), Positives = 76/111 (68%)
 Frame = +3

Query: 156 MTIKVDLEKAYDHIEWDFLQMVLEEVEFREKLIKIIMFCVSSTKLSLLWNGDKLEPFTPN 335
           M IKVDLEKAYD + W+F+   L E+     LI++IM C++ST +++LW+G+  + F+P+
Sbjct: 1   MAIKVDLEKAYDRLSWNFIYETLTELALPIGLIQLIMECITSTSMNILWHGELTDDFSPS 60

Query: 336 RGLRQGDRLSPYPFVLCMEVLGKRMNKAKAYGIWKGVKASRHGPSIPHIFF 488
           RG+RQGD LSPY FVLC+E L   + ++     WK ++ SR G  + H+FF
Sbjct: 61  RGVRQGDPLSPYIFVLCVERLSHGIYQSIHQDHWKPIRLSRLGTPLSHLFF 111



 Score = 45.1 bits (105), Expect(3) = 1e-32
 Identities = 24/73 (32%), Positives = 40/73 (54%)
 Frame = +1

Query: 556 GKFCKESGQKIDTHKSKLFSSKNTLARLRASLSQQFEILETDDLEIYLGLPVLHGRITRK 735
           G FC  SG K++  K+ ++ SKN    +   + +      T DL  YLG+P+LH R++++
Sbjct: 134 GDFCLSSGTKVNQSKTHVYFSKNVPDAVATRIWRDLGYTVTKDLGKYLGMPLLHSRVSQQ 193

Query: 736 FFFDFILSKVRKK 774
             +  IL K  +K
Sbjct: 194 -TYQGILDKTDQK 205



 Score = 31.6 bits (70), Expect(3) = 1e-32
 Identities = 14/30 (46%), Positives = 21/30 (70%)
 Frame = +2

Query: 476 THLFFVNDLILFGEASREQAQVMAAKTENF 565
           +HLFF +DL+LF EA+  QAQ + +   +F
Sbjct: 107 SHLFFTDDLLLFAEATSGQAQCINSVLGDF 136


>gb|AAC26674.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 970

 Score =  127 bits (318), Expect(2) = 1e-32
 Identities = 71/153 (46%), Positives = 95/153 (62%), Gaps = 2/153 (1%)
 Frame = +3

Query: 3   VTKII--RVKSLIDKLVLENQASFILNRQASDNIVILQEMIYCMQKKMGRKRTMTIKVDL 176
           +TK+I  R+K +I KL+   QA+FI  R + DNIV++QE ++ M++K GRK  M +K+DL
Sbjct: 231 ITKMIVNRLKKVILKLIGPAQANFIPGRLSIDNIVLVQEAVHSMRRKKGRKGWMLLKLDL 290

Query: 177 EKAYDHIEWDFLQMVLEEVEFREKLIKIIMFCVSSTKLSLLWNGDKLEPFTPNRGLRQGD 356
           EKAYD I W+FLQ  L      E     IM  V+   +S+LWNG K + F P RGLRQGD
Sbjct: 291 EKAYDRIRWNFLQETLVATGLSEVWTHRIMAGVTDPSMSVLWNGGKTDSFVPARGLRQGD 350

Query: 357 RLSPYPFVLCMEVLGKRMNKAKAYGIWKGVKAS 455
            LSPY FVLC+E L   +  +     WK +  S
Sbjct: 351 PLSPYLFVLCLERLCHLIEASVGTWDWKPMALS 383



 Score = 40.0 bits (92), Expect(2) = 1e-32
 Identities = 20/59 (33%), Positives = 33/59 (55%)
 Frame = +1

Query: 559 KFCKESGQKIDTHKSKLFSSKNTLARLRASLSQQFEILETDDLEIYLGLPVLHGRITRK 735
           +FC+ SGQ +   KSK+  S N    +   +S +  I  T +L  YLG+P+L  R+ ++
Sbjct: 400 QFCEASGQNVSLEKSKIVFSNNVSRDMERLISGESGIGCTRELGKYLGMPILQKRMNKE 458


>gb|EPS72636.1| hypothetical protein M569_02121, partial [Genlisea aurea]
          Length = 1503

 Score =  120 bits (302), Expect(2) = 1e-31
 Identities = 58/158 (36%), Positives = 99/158 (62%), Gaps = 1/158 (0%)
 Frame = +3

Query: 18   RVKSLIDKLVLENQASFILNRQASDNIVILQEMIYCMQK-KMGRKRTMTIKVDLEKAYDH 194
            R+K  + +++   Q++F+ +R  +DNI++  E+ + ++  + G+K  +++K+D+ KAYD 
Sbjct: 863  RLKEFVSEIISPWQSAFVPDRLITDNILVAFEVNHSIRNLRRGKKSFVSLKLDMNKAYDR 922

Query: 195  IEWDFLQMVLEEVEFREKLIKIIMFCVSSTKLSLLWNGDKLEPFTPNRGLRQGDRLSPYP 374
            +EW FL+ +L ++ F    +++I+  VSS   SL+ NGD++    P RGLRQGD LSPY 
Sbjct: 923  VEWSFLKAMLIQLGFHISFVELILLAVSSVSYSLVINGDRVGLINPQRGLRQGDPLSPYL 982

Query: 375  FVLCMEVLGKRMNKAKAYGIWKGVKASRHGPSIPHIFF 488
            F+ C E L   +  A+      G + +R GPSI H+FF
Sbjct: 983  FLFCAEGLSSALRAAEQSQSITGFRVTRRGPSISHLFF 1020



 Score = 42.7 bits (99), Expect(2) = 1e-31
 Identities = 26/69 (37%), Positives = 38/69 (55%)
 Frame = +1

Query: 568  KESGQKIDTHKSKLFSSKNTLARLRASLSQQFEILETDDLEIYLGLPVLHGRITRKFFFD 747
            + SGQK++THKS +  S NT    +   S+    L     +IYLGLP L G  ++K  F 
Sbjct: 1047 RASGQKVNTHKSAMVFSPNTPDSEKEIWSRGLGFLVKSHHDIYLGLPSLTGS-SKKRLFS 1105

Query: 748  FILSKVRKK 774
             +L +V +K
Sbjct: 1106 GLLERVNRK 1114


>emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1363

 Score =  140 bits (354), Expect = 4e-31
 Identities = 68/164 (41%), Positives = 105/164 (64%), Gaps = 2/164 (1%)
 Frame = +3

Query: 3    VTKII--RVKSLIDKLVLENQASFILNRQASDNIVILQEMIYCMQKKMGRKRTMTIKVDL 176
            +TK+I  R+K ++ +L+  +Q SF+  R   +NI+I +EM +  +K   ++  M +K+DL
Sbjct: 522  ITKVIANRIKPILGELIHPSQTSFVPGRNIQENIIIAKEMAFLFKKSNPKRNIMALKIDL 581

Query: 177  EKAYDHIEWDFLQMVLEEVEFREKLIKIIMFCVSSTKLSLLWNGDKLEPFTPNRGLRQGD 356
             KAYD +EW F++  L+   F + LI +IM C+SS  +SL+WNG+  + F+P+RG+RQGD
Sbjct: 582  SKAYDSLEWGFIRETLQGFNFPQSLIALIMDCISSPAISLIWNGEVTQSFSPSRGIRQGD 641

Query: 357  RLSPYPFVLCMEVLGKRMNKAKAYGIWKGVKASRHGPSIPHIFF 488
             LSPY FVLCME L   ++     G WK +K S     + HIF+
Sbjct: 642  PLSPYIFVLCMERLSMLISDRIRDGSWKPIKIS-SDLGVSHIFY 684


>gb|AAD29058.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1229

 Score =  123 bits (308), Expect(2) = 5e-31
 Identities = 65/165 (39%), Positives = 98/165 (59%), Gaps = 3/165 (1%)
 Frame = +3

Query: 3   VTKII--RVKSLIDKLVLENQASFILNRQASDNIVILQEMIYCMQKKMGRKR-TMTIKVD 173
           V KI+  R++ ++ KL+ ENQ++F+  R  SDN++I  E+++ ++    +K  +M +K D
Sbjct: 412 VAKIMTKRMQLILPKLISENQSAFVPGRVISDNVLITHEVLHFLRTSSAKKHCSMAVKTD 471

Query: 174 LEKAYDHIEWDFLQMVLEEVEFREKLIKIIMFCVSSTKLSLLWNGDKLEPFTPNRGLRQG 353
           + KAYD +EWDFL+ VL+   F    I  ++ CV+S   S L NG       P RGLRQG
Sbjct: 472 MSKAYDRVEWDFLKKVLQRFGFHSIWIDWVLECVTSVSYSFLINGTPQGKVVPTRGLRQG 531

Query: 354 DRLSPYPFVLCMEVLGKRMNKAKAYGIWKGVKASRHGPSIPHIFF 488
           D LSP  F+LC EVL     +A+      GV+ S +GP + H+ F
Sbjct: 532 DPLSPCLFILCTEVLSGLCTRAQRLRQLPGVRVSINGPRVNHLLF 576



 Score = 38.5 bits (88), Expect(2) = 5e-31
 Identities = 23/72 (31%), Positives = 38/72 (52%)
 Frame = +1

Query: 559 KFCKESGQKIDTHKSKLFSSKNTLARLRASLSQQFEILETDDLEIYLGLPVLHGRITRKF 738
           ++ K SGQ I+ HKS +  S  T   ++  + +  +I +      YLGLP   GR  ++ 
Sbjct: 600 RYGKASGQSINFHKSSVTFSSKTPRSVKGQVKRILKIRKEGGTGKYLGLPEHFGR-RKRD 658

Query: 739 FFDFILSKVRKK 774
            F  I+ K+R+K
Sbjct: 659 IFGAIIDKIRQK 670


>gb|AAG13524.1|AC068924_29 putative non-LTR retroelement reverse transcriptase [Oryza sativa
            Japonica Group]
          Length = 1382

 Score =  121 bits (304), Expect(2) = 6e-31
 Identities = 56/157 (35%), Positives = 96/157 (61%)
 Frame = +3

Query: 18   RVKSLIDKLVLENQASFILNRQASDNIVILQEMIYCMQKKMGRKRTMTIKVDLEKAYDHI 197
            R+K  +  +V E Q++F+  R  +D+ ++  E ++ ++K+  +     +K+D+ KAYD +
Sbjct: 540  RLKPFLPDIVSEFQSAFVPGRLITDSALVAYECLHTIRKQHNKNPFFALKIDMMKAYDRV 599

Query: 198  EWDFLQMVLEEVEFREKLIKIIMFCVSSTKLSLLWNGDKLEPFTPNRGLRQGDRLSPYPF 377
            EW +L   L ++ F +  I  +M CVSS + ++  NG+  +P  P+RG+RQGD +SPY F
Sbjct: 600  EWAYLSGCLSKLGFSQDWINTVMRCVSSVRYAVKINGELTKPVVPSRGIRQGDPISPYLF 659

Query: 378  VLCMEVLGKRMNKAKAYGIWKGVKASRHGPSIPHIFF 488
            +LC E L   ++K +  G  +G+K  RHGP I H+ F
Sbjct: 660  LLCTEGLSCLLHKKEVAGELQGIKNGRHGPPISHLLF 696



 Score = 39.7 bits (91), Expect(2) = 6e-31
 Identities = 22/71 (30%), Positives = 36/71 (50%)
 Frame = +1

Query: 562 FCKESGQKIDTHKSKLFSSKNTLARLRASLSQQFEILETDDLEIYLGLPVLHGRITRKFF 741
           +C  SGQKI+ HKS +F  K     ++ S+    ++      + YLG+P   G  T   F
Sbjct: 721 YCSASGQKINLHKSSIFFGKRCPDAVKISVKSCLQVDNEVLQDSYLGMPTEIGLATTN-F 779

Query: 742 FDFILSKVRKK 774
           F F+  ++ K+
Sbjct: 780 FKFLPERIWKR 790