BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00019310
         (1215 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004308707.1| PREDICTED: putative ribonuclease H protein A...    67   2e-08
gb|ABA98898.1| retrotransposon protein, putative, unclassified [...    65   7e-08
gb|EMJ14194.1| hypothetical protein PRUPE_ppa022768mg, partial [...    59   3e-06

>ref|XP_004308707.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
            vesca subsp. vesca]
          Length = 498

 Score = 66.6 bits (161), Expect = 2e-08
 Identities = 70/316 (22%), Positives = 126/316 (39%), Gaps = 30/316 (9%)
 Frame = -3

Query: 1027 DRLIWHDEKSGRFTVPSAYYMGMCFMEQXXXXXXXXXXX*GENGGLWKKLWACXXXXXXX 848
            DR+IW  EK G +TV SAY++    +                   LWKKLW         
Sbjct: 135  DRVIWKPEKRGFYTVKSAYWIARSTVMPNALASTSSGNAFLP---LWKKLWKARVPGKVM 191

Query: 847  XXXXXISHYLVP-----FVHDVEQQKK--------KTNPHVFFFYPWARQT*DCWEKDIK 707
                   H L+P          E   K        +T  H+    P A+           
Sbjct: 192  HCAWRACHDLLPTRAKLVTKGYEGTLKCLSCPHPCETTAHLVCACPIAQT---------- 241

Query: 706  KVVKGVGSSCEVIRN-VLNSDKWF-------NEDEKVEFFILLWGLWIARDKWVFENYSQ 551
             ++ G   +  V+ + + N  +W        ++D+  +  +++WGLW  R+  ++ +  Q
Sbjct: 242  -ILLGSHLNITVLMSSIFNFKEWMLEQATSLSDDKFQKLLMIIWGLWRNRNNMLWSDKQQ 300

Query: 550  TPEELVIISKKWRRGVYVSKIPIESKCTT*SKVSEMETTCGKGYSVSVDGAW--KDVRAG 377
            T +E++  +  W         P +    T  +V            ++VDGA+   +   G
Sbjct: 301  TAQEIICGTMSWYHEFTTINYPQQKPSKTSQRVKWFPPAVDH-LKLNVDGAFMPNETEGG 359

Query: 376  ITVVNRDSTGDVMSLISE---GLSSWEQVEILAISKGTI----YA*SGVVIESDCQAMVD 218
            +  + RD+ G V++  ++   G++S  Q E+ AI  G I    Y     ++E+DCQ  V+
Sbjct: 360  VGGILRDNQGIVVAAFTKHISGINSANQAELKAIRAGLIWLKTYNFHNCILETDCQVAVN 419

Query: 217  KINSKEEDISALGHII 170
            ++  ++      G+II
Sbjct: 420  EVQLQDYISLEYGNII 435


>gb|ABA98898.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1188

 Score = 64.7 bits (156), Expect = 7e-08
 Identities = 78/356 (21%), Positives = 141/356 (39%), Gaps = 45/356 (12%)
 Frame = -3

Query: 1033 EPDRLIWHDEKSGRFTVPSAYYMGMCFMEQXXXXXXXXXXX*GENGGLWKKLWACXXXXX 854
            + D + W+ +K G+F++ SAY + +    Q             +   +W  +W C     
Sbjct: 811  DEDFIAWYPDKMGQFSIRSAYMLAV----QLANAGESSSSSGNDTKKVWNHVWKCNIPQK 866

Query: 853  XXXXXXXISHYLVPFVHDVEQQKKKTNP-----------------HVFFFYPWARQT*DC 725
                        +P +      KKK NP                 H  +  P AR+  D 
Sbjct: 867  VKVFSWRAISNCLPTM----VNKKKRNPELSDVCSFCGLEPEDVAHALWRCPHARRYWDL 922

Query: 724  W--EKDIKKVVKGVGSSCEVIRNVLNSDKWFNEDEKVEFFILLWGLWIARDKWVFENYSQ 551
               E  +++++ G G   + I + L S    +ED++  F + LW +W  R++   +  + 
Sbjct: 923  MSSEMQVQRILYGSGEGSDWILDFLES---ISEDDRPVFLMSLWRIWYTRNEITHDKAAP 979

Query: 550  TPEELVIISKKWRRGVYVSKIPIES------------------KCTT*SKVSEMETTCGK 425
              E    +SK++ R    S   I++                  KC   S +++ E     
Sbjct: 980  PVE----VSKRFVRSYVNSLKEIKARPNANLGSGKHVIGEDRPKCKKQSVLAKWEKPPSG 1035

Query: 424  GYSVSVDGAWKDVRAG-ITVVNRDSTGDVMSL---ISEGLSSWEQVEILAISKGTIYA*S 257
               ++VDG++++   G I+ + R+STGDV+       E   S  + EILA  +G   A  
Sbjct: 1036 WMKLNVDGSYQEDNIGEISAILRNSTGDVIFAACGFVEQCQSALEAEILACKEGIGLALQ 1095

Query: 256  ----GVVIESDCQAMVDKINSKEEDISALGHIITVVQRHIISICGAKL*YINKKVN 101
                 ++IESDC   +  I S+ +  S    ++  +Q  +      KL  +N+  N
Sbjct: 1096 WTLLPIIIESDCAEALQLILSEGKLRSVNKFLVREIQGMVKGAREMKLKKVNRNCN 1151


>gb|EMJ14194.1| hypothetical protein PRUPE_ppa022768mg, partial [Prunus persica]
          Length = 887

 Score = 59.3 bits (142), Expect = 3e-06
 Identities = 77/334 (23%), Positives = 130/334 (38%), Gaps = 25/334 (7%)
 Frame = -3

Query: 1027 DRLIWHDEKSGRFTVPSAYYMGMCFMEQXXXXXXXXXXX*GENGGLWKKLWACXXXXXXX 848
            D+LIWH ++ G+F+V SAY+                         LW+ LW         
Sbjct: 551  DQLIWHYDRKGQFSVRSAYH-----------------------SILWRTLWKANILAKVK 587

Query: 847  XXXXXISHYLVPFVHDVEQQKK--------------KTNPHVFFFYPWARQT*DCWEKDI 710
                 +   ++P  HD   QKK              +T  HV     W   +  C  +D+
Sbjct: 588  VFWWCVCLNILP-THDNLAQKKVPINDGCVHCGLMPETTLHVLRDCNWLSSSLGCL-RDL 645

Query: 709  KKV--VKGVGSSCEVIRNVLNSDKWFNEDEKVEFFILLWGLWIARDKWVFENYSQTPEEL 536
            + +  VK   S C   R++  +D  F       FF++ W LW  R+   + N S  P  +
Sbjct: 646  EGMPSVKDWVSHC--FRSLTPTDLGF-------FFMMGWSLWEQRNGLPWNNKSSCPSLV 696

Query: 535  VIISKKWRRGVYVSKIPIESKCTT*SKVSEMETTCGKGYSVSVDGAWKDV--RAGITVVN 362
              I+            P  + C+   +V        +   ++VDGAW  +    G+ VV 
Sbjct: 697  GHIAHNRLLEYLQVNRPGGTPCSNQDQVQRWTKPPMRHLKINVDGAWNAITKSGGVGVVI 756

Query: 361  RDSTGDVMSLIS---EGLSSWEQVEILAISKGTIYA----*SGVVIESDCQAMVDKINSK 203
            RDS G  ++  +   + + S  Q+E LA  +G + A     + +  ESD   +V  +   
Sbjct: 757  RDSAGAFIAGRARKFDNVFSALQIEALAAREGVVLAVERGLTNICFESDSLQIVTALGCS 816

Query: 202  EEDISALGHIITVVQRHIISICGAKL*YINKKVN 101
              D S +G I+   +  ++ I G    ++ +  N
Sbjct: 817  SLDRSFIGPILEDSKFLLLQITGEGFAHVCRTAN 850