BLASTX nr result
ID: Catharanthus22_contig00019144
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00019144
(206 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004243124.1| PREDICTED: pentatricopeptide repeat-containi... 71 2e-10
ref|XP_006443350.1| hypothetical protein CICLE_v10019425mg [Citr... 69 5e-10
gb|EOY10733.1| Pentatricopeptide repeat-containing protein, puta... 68 1e-09
ref|XP_002275952.1| PREDICTED: pentatricopeptide repeat-containi... 67 2e-09
ref|NP_197005.2| pentatricopeptide repeat-containing protein [Ar... 67 3e-09
ref|XP_002525469.1| pentatricopeptide repeat-containing protein,... 67 3e-09
emb|CAC01820.1| putative protein [Arabidopsis thaliana] 67 3e-09
ref|XP_006286634.1| hypothetical protein CARUB_v10002473mg [Caps... 66 4e-09
ref|XP_006352063.1| PREDICTED: pentatricopeptide repeat-containi... 65 7e-09
ref|XP_002871645.1| pentatricopeptide repeat-containing protein ... 65 7e-09
ref|XP_002319140.2| pentatricopeptide repeat-containing family p... 65 9e-09
ref|XP_002319139.1| predicted protein [Populus trichocarpa] 65 9e-09
gb|EPS59675.1| hypothetical protein M569_15124, partial [Genlise... 65 1e-08
gb|EMT31806.1| hypothetical protein F775_12996 [Aegilops tauschii] 65 1e-08
gb|EMS67682.1| hypothetical protein TRIUR3_04331 [Triticum urartu] 65 1e-08
ref|XP_006644900.1| PREDICTED: pentatricopeptide repeat-containi... 64 2e-08
ref|XP_006387693.1| hypothetical protein POPTR_0671s00210g [Popu... 64 2e-08
ref|XP_003624580.1| Pentatricopeptide repeat-containing protein ... 63 5e-08
gb|ESW33763.1| hypothetical protein PHAVU_001G0968000g, partial ... 62 6e-08
gb|ESW33762.1| hypothetical protein PHAVU_001G0968000g [Phaseolu... 62 6e-08
>ref|XP_004243124.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15010,
mitochondrial-like [Solanum lycopersicum]
Length = 548
Score = 70.9 bits (172), Expect = 2e-10
Identities = 32/52 (61%), Positives = 42/52 (80%)
Frame = +3
Query: 51 RNLMKKMEESGISPDVVTYNSLIMPLCRKRQPVEAREVFYEMIARGMSPTAR 206
R++MK MEE+ ++P+ VTYNSLIMPLC+ R P EA+E+F EMI RG+ PT R
Sbjct: 334 RSVMKMMEENDLAPNAVTYNSLIMPLCKARLPDEAQEIFNEMIQRGIHPTVR 385
>ref|XP_006443350.1| hypothetical protein CICLE_v10019425mg [Citrus clementina]
gi|568850720|ref|XP_006479049.1| PREDICTED:
pentatricopeptide repeat-containing protein At5g15010,
mitochondrial-like [Citrus sinensis]
gi|557545612|gb|ESR56590.1| hypothetical protein
CICLE_v10019425mg [Citrus clementina]
Length = 588
Score = 69.3 bits (168), Expect = 5e-10
Identities = 32/51 (62%), Positives = 41/51 (80%)
Frame = +3
Query: 54 NLMKKMEESGISPDVVTYNSLIMPLCRKRQPVEAREVFYEMIARGMSPTAR 206
+LMK MEE G++P+VVTYNSLI PLC+ R+ EAR+ F EM+ RG+SPT R
Sbjct: 371 SLMKSMEEKGVAPNVVTYNSLIKPLCKARKLDEARQAFDEMLQRGISPTIR 421
>gb|EOY10733.1| Pentatricopeptide repeat-containing protein, putative [Theobroma
cacao]
Length = 602
Score = 67.8 bits (164), Expect = 1e-09
Identities = 32/51 (62%), Positives = 41/51 (80%)
Frame = +3
Query: 54 NLMKKMEESGISPDVVTYNSLIMPLCRKRQPVEAREVFYEMIARGMSPTAR 206
NL+K MEE GI+P+VVTYNSLI PLC+ ++ EAR+VF EM+ R +SPT R
Sbjct: 377 NLLKTMEEKGIAPNVVTYNSLIKPLCKAQKIDEARQVFDEMLQRDLSPTIR 427
>ref|XP_002275952.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15010,
mitochondrial-like [Vitis vinifera]
Length = 566
Score = 67.4 bits (163), Expect = 2e-09
Identities = 34/51 (66%), Positives = 39/51 (76%)
Frame = +3
Query: 54 NLMKKMEESGISPDVVTYNSLIMPLCRKRQPVEAREVFYEMIARGMSPTAR 206
NLMK ME GI+PD VTYNSLI PL R R+ EA+EVF EM+ RG+SPT R
Sbjct: 346 NLMKAMEGKGIAPDSVTYNSLIKPLSRARKINEAKEVFDEMLQRGLSPTIR 396
>ref|NP_197005.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635761|sp|Q9LFQ4.2|PP383_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At5g15010, mitochondrial; Flags: Precursor
gi|332004721|gb|AED92104.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 572
Score = 66.6 bits (161), Expect = 3e-09
Identities = 33/53 (62%), Positives = 41/53 (77%), Gaps = 1/53 (1%)
Frame = +3
Query: 51 RNLMKKMEES-GISPDVVTYNSLIMPLCRKRQPVEAREVFYEMIARGMSPTAR 206
RNLMK MEE GI P+VVTYNSLI PLC+ R+ EA++VF EM+ +G+ PT R
Sbjct: 357 RNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIR 409
>ref|XP_002525469.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223535282|gb|EEF36959.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 581
Score = 66.6 bits (161), Expect = 3e-09
Identities = 33/51 (64%), Positives = 38/51 (74%)
Frame = +3
Query: 54 NLMKKMEESGISPDVVTYNSLIMPLCRKRQPVEAREVFYEMIARGMSPTAR 206
NLMK MEE GI+P+ VTYNSLI PLCR R+ EAR +F EM+ G SPT R
Sbjct: 360 NLMKTMEEKGIAPNTVTYNSLIKPLCRARKIDEARGLFDEMLQHGHSPTIR 410
>emb|CAC01820.1| putative protein [Arabidopsis thaliana]
Length = 532
Score = 66.6 bits (161), Expect = 3e-09
Identities = 33/53 (62%), Positives = 41/53 (77%), Gaps = 1/53 (1%)
Frame = +3
Query: 51 RNLMKKMEES-GISPDVVTYNSLIMPLCRKRQPVEAREVFYEMIARGMSPTAR 206
RNLMK MEE GI P+VVTYNSLI PLC+ R+ EA++VF EM+ +G+ PT R
Sbjct: 317 RNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIR 369
>ref|XP_006286634.1| hypothetical protein CARUB_v10002473mg [Capsella rubella]
gi|482555340|gb|EOA19532.1| hypothetical protein
CARUB_v10002473mg [Capsella rubella]
Length = 580
Score = 66.2 bits (160), Expect = 4e-09
Identities = 32/53 (60%), Positives = 41/53 (77%), Gaps = 1/53 (1%)
Frame = +3
Query: 51 RNLMKKMEES-GISPDVVTYNSLIMPLCRKRQPVEAREVFYEMIARGMSPTAR 206
RNLMK MEE GI P+VVTYNS+I PLC+ R+ EA++VF EM+ +G+ PT R
Sbjct: 362 RNLMKTMEEEKGIKPNVVTYNSIIKPLCKARKTEEAKQVFDEMLGKGLFPTIR 414
>ref|XP_006352063.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15010,
mitochondrial-like [Solanum tuberosum]
Length = 566
Score = 65.5 bits (158), Expect = 7e-09
Identities = 30/52 (57%), Positives = 41/52 (78%)
Frame = +3
Query: 51 RNLMKKMEESGISPDVVTYNSLIMPLCRKRQPVEAREVFYEMIARGMSPTAR 206
R++MK MEE+ ++P+ VTYNSLIMPLC+ + EA+E+F EMI RG+ PT R
Sbjct: 352 RSVMKMMEENDLAPNAVTYNSLIMPLCKAQLLDEAQEIFNEMIQRGIHPTVR 403
>ref|XP_002871645.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297317482|gb|EFH47904.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 524
Score = 65.5 bits (158), Expect = 7e-09
Identities = 32/53 (60%), Positives = 41/53 (77%), Gaps = 1/53 (1%)
Frame = +3
Query: 51 RNLMKKMEES-GISPDVVTYNSLIMPLCRKRQPVEAREVFYEMIARGMSPTAR 206
RNLMK MEE G+ P+VVTYNSLI PLC+ R+ EA++VF EM+ +G+ PT R
Sbjct: 306 RNLMKTMEEEKGMEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIR 358
>ref|XP_002319140.2| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550324994|gb|EEE95063.2|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 518
Score = 65.1 bits (157), Expect = 9e-09
Identities = 30/51 (58%), Positives = 39/51 (76%)
Frame = +3
Query: 54 NLMKKMEESGISPDVVTYNSLIMPLCRKRQPVEAREVFYEMIARGMSPTAR 206
NLMK MEE G++P++VTYNSLI PLCR R+ EA+ F +M+ R +SPT R
Sbjct: 288 NLMKTMEEKGVAPNIVTYNSLIKPLCRARKVEEAKGAFDDMLKRCISPTIR 338
>ref|XP_002319139.1| predicted protein [Populus trichocarpa]
Length = 518
Score = 65.1 bits (157), Expect = 9e-09
Identities = 30/51 (58%), Positives = 39/51 (76%)
Frame = +3
Query: 54 NLMKKMEESGISPDVVTYNSLIMPLCRKRQPVEAREVFYEMIARGMSPTAR 206
NLMK MEE G++P++VTYNSLI PLCR R+ EA+ F +M+ R +SPT R
Sbjct: 288 NLMKTMEEKGVAPNIVTYNSLIKPLCRARKVEEAKGAFDDMLKRCISPTIR 338
>gb|EPS59675.1| hypothetical protein M569_15124, partial [Genlisea aurea]
Length = 426
Score = 64.7 bits (156), Expect = 1e-08
Identities = 31/51 (60%), Positives = 38/51 (74%)
Frame = +3
Query: 54 NLMKKMEESGISPDVVTYNSLIMPLCRKRQPVEAREVFYEMIARGMSPTAR 206
+LMK MEE GI PD VTYNSLIMPLC+ R EA++ F EM+ RG+ P+ R
Sbjct: 261 SLMKTMEEKGIPPDSVTYNSLIMPLCKHRLLDEAKQAFDEMMQRGLLPSVR 311
>gb|EMT31806.1| hypothetical protein F775_12996 [Aegilops tauschii]
Length = 371
Score = 64.7 bits (156), Expect = 1e-08
Identities = 29/52 (55%), Positives = 38/52 (73%)
Frame = +3
Query: 51 RNLMKKMEESGISPDVVTYNSLIMPLCRKRQPVEAREVFYEMIARGMSPTAR 206
R L++ MEE G++PD TYNSLI PLC+ RQ EARE+F EM+ RG+ + R
Sbjct: 79 RALVRSMEEKGVTPDTATYNSLIRPLCKARQVQEAREMFDEMVGRGLLASVR 130
>gb|EMS67682.1| hypothetical protein TRIUR3_04331 [Triticum urartu]
Length = 359
Score = 64.7 bits (156), Expect = 1e-08
Identities = 29/52 (55%), Positives = 38/52 (73%)
Frame = +3
Query: 51 RNLMKKMEESGISPDVVTYNSLIMPLCRKRQPVEAREVFYEMIARGMSPTAR 206
R L++ MEE G++PD TYNSLI PLC+ RQ EARE+F EM+ RG+ + R
Sbjct: 169 RALVRSMEEKGVAPDTATYNSLIRPLCKARQVQEAREMFDEMVGRGLLASVR 220
>ref|XP_006644900.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15010,
mitochondrial-like [Oryza brachyantha]
Length = 526
Score = 63.9 bits (154), Expect = 2e-08
Identities = 27/52 (51%), Positives = 39/52 (75%)
Frame = +3
Query: 51 RNLMKKMEESGISPDVVTYNSLIMPLCRKRQPVEAREVFYEMIARGMSPTAR 206
+ L++ MEE G++PD T+NSLI PLC+ RQ EARE+ +M+ RG+SP+ R
Sbjct: 337 KTLVRSMEEKGVAPDTATFNSLIRPLCKARQIQEAREMLDDMLGRGLSPSVR 388
>ref|XP_006387693.1| hypothetical protein POPTR_0671s00210g [Populus trichocarpa]
gi|550308165|gb|ERP46607.1| hypothetical protein
POPTR_0671s00210g [Populus trichocarpa]
Length = 599
Score = 63.9 bits (154), Expect = 2e-08
Identities = 29/51 (56%), Positives = 39/51 (76%)
Frame = +3
Query: 54 NLMKKMEESGISPDVVTYNSLIMPLCRKRQPVEAREVFYEMIARGMSPTAR 206
NLM+ MEE G++P++VTYNSLI PLCR R+ EA+ F +M+ R +SPT R
Sbjct: 369 NLMRTMEEKGVAPNIVTYNSLIKPLCRARKVEEAKGAFDDMLKRCISPTIR 419
>ref|XP_003624580.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499595|gb|AES80798.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 585
Score = 62.8 bits (151), Expect = 5e-08
Identities = 27/51 (52%), Positives = 40/51 (78%)
Frame = +3
Query: 54 NLMKKMEESGISPDVVTYNSLIMPLCRKRQPVEAREVFYEMIARGMSPTAR 206
NL+ KME++ ++PD +TYNSLI PLC+ R+ EA+E+F M+ RG+SP+ R
Sbjct: 364 NLIIKMEDNNVTPDAITYNSLIKPLCKARKIDEAKEIFNVMLERGISPSIR 414
>gb|ESW33763.1| hypothetical protein PHAVU_001G0968000g, partial [Phaseolus
vulgaris]
Length = 617
Score = 62.4 bits (150), Expect = 6e-08
Identities = 28/49 (57%), Positives = 40/49 (81%)
Frame = +3
Query: 54 NLMKKMEESGISPDVVTYNSLIMPLCRKRQPVEAREVFYEMIARGMSPT 200
NL++KME++ I P+VVTYNSLI PLC+ R+ EA+++F EM+ R +SPT
Sbjct: 391 NLIEKMEDNNIIPNVVTYNSLIKPLCKARKVDEAKQLFDEMLERSLSPT 439
>gb|ESW33762.1| hypothetical protein PHAVU_001G0968000g [Phaseolus vulgaris]
Length = 611
Score = 62.4 bits (150), Expect = 6e-08
Identities = 28/49 (57%), Positives = 40/49 (81%)
Frame = +3
Query: 54 NLMKKMEESGISPDVVTYNSLIMPLCRKRQPVEAREVFYEMIARGMSPT 200
NL++KME++ I P+VVTYNSLI PLC+ R+ EA+++F EM+ R +SPT
Sbjct: 391 NLIEKMEDNNIIPNVVTYNSLIKPLCKARKVDEAKQLFDEMLERSLSPT 439