BLASTX nr result
ID: Catharanthus22_contig00019063
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00019063
(684 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006340477.1| PREDICTED: pentatricopeptide repeat-containi... 140 6e-42
ref|XP_004237507.1| PREDICTED: pentatricopeptide repeat-containi... 140 4e-41
gb|EXB85827.1| hypothetical protein L484_009673 [Morus notabilis] 144 2e-39
ref|XP_004288209.1| PREDICTED: pentatricopeptide repeat-containi... 135 8e-38
ref|XP_003627859.1| Pentatricopeptide repeat-containing protein ... 127 2e-36
gb|EPS67755.1| hypothetical protein M569_07017, partial [Genlise... 135 5e-36
ref|XP_006430873.1| hypothetical protein CICLE_v10011342mg [Citr... 125 7e-36
ref|XP_006482334.1| PREDICTED: pentatricopeptide repeat-containi... 122 1e-35
emb|CBI16890.3| unnamed protein product [Vitis vinifera] 129 5e-35
ref|XP_002279045.1| PREDICTED: pentatricopeptide repeat-containi... 129 5e-35
emb|CAN75614.1| hypothetical protein VITISV_022293 [Vitis vinifera] 129 8e-35
ref|XP_002532893.1| pentatricopeptide repeat-containing protein,... 121 3e-34
ref|XP_002329310.1| predicted protein [Populus trichocarpa] gi|5... 128 6e-34
gb|EMJ09454.1| hypothetical protein PRUPE_ppa016546mg [Prunus pe... 147 3e-33
ref|XP_006405706.1| hypothetical protein EUTSA_v10028323mg [Eutr... 124 3e-32
ref|XP_006282941.1| hypothetical protein CARUB_v10007510mg [Caps... 122 4e-32
ref|XP_002870827.1| pentatricopeptide repeat-containing protein ... 122 3e-31
ref|NP_198689.1| pentatricopeptide repeat-containing protein [Ar... 118 5e-31
ref|XP_004140465.1| PREDICTED: pentatricopeptide repeat-containi... 132 1e-28
ref|XP_003545840.1| PREDICTED: pentatricopeptide repeat-containi... 128 1e-27
>ref|XP_006340477.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g38730-like [Solanum tuberosum]
Length = 588
Score = 140 bits (354), Expect(2) = 6e-42
Identities = 66/96 (68%), Positives = 79/96 (82%)
Frame = +1
Query: 391 FLSSPMVLNALVLSNSNDPEVNSHVLSWLIIFYADSEMIQVAIQVFDHMRLCGFKPHLHA 570
FLSSP VLNA V SN N+ +VNSH+LSWL+IFYA+S++ AIQVF+HMR+C PH HA
Sbjct: 106 FLSSPTVLNAFVRSNMNN-DVNSHLLSWLVIFYANSKLPHDAIQVFEHMRVCKLMPHTHA 164
Query: 571 CTALLNSLVKDGFCDTVWKVYKNMIKVGVLPNLYIY 678
CT LLNSLVKDG DT+WK+YK M K+GVLPN+YIY
Sbjct: 165 CTTLLNSLVKDGLTDTLWKIYKKMQKIGVLPNIYIY 200
Score = 57.0 bits (136), Expect(2) = 6e-42
Identities = 38/102 (37%), Positives = 54/102 (52%), Gaps = 6/102 (5%)
Frame = +2
Query: 107 ESEVVKTVCAIVLKGHWQCFEAKDWFLCDINNHQSNSN*SFTL*IFSFLVIL*MGRFNSM 286
++E+VK V A+V KGHW + I + +++ S L S F
Sbjct: 10 DNEMVKAVAAVVFKGHWD-----NLLKPKIGSFVTSTTISQALLHISQYYFSLSWSFFQW 64
Query: 287 LQP------SLQTSWIMICILTKQKHFKSPQSMLQKIALRHF 394
+ SLQ+SW MI ILTKQKHFK+ Q MLQK+A+++F
Sbjct: 65 AESVPNYKHSLQSSWTMIYILTKQKHFKTAQDMLQKVAVKNF 106
>ref|XP_004237507.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g38730-like [Solanum lycopersicum]
Length = 588
Score = 140 bits (354), Expect(2) = 4e-41
Identities = 66/96 (68%), Positives = 80/96 (83%)
Frame = +1
Query: 391 FLSSPMVLNALVLSNSNDPEVNSHVLSWLIIFYADSEMIQVAIQVFDHMRLCGFKPHLHA 570
FLSSP VLNALV SN N+ +VNSH+LSWL+IFYA+S++ AIQVF+HMR+C PH HA
Sbjct: 106 FLSSPTVLNALVRSNMNN-DVNSHLLSWLVIFYANSKLPHDAIQVFEHMRVCKLMPHTHA 164
Query: 571 CTALLNSLVKDGFCDTVWKVYKNMIKVGVLPNLYIY 678
C+ LLNSLVKDG DT+WK+YK M K+GVLPN+YIY
Sbjct: 165 CSTLLNSLVKDGLTDTLWKIYKKMQKIGVLPNIYIY 200
Score = 54.3 bits (129), Expect(2) = 4e-41
Identities = 36/103 (34%), Positives = 52/103 (50%), Gaps = 7/103 (6%)
Frame = +2
Query: 107 ESEVVKTVCAIVLKGHWQCF-------EAKDWFLCDINNHQSNSN*SFTL*IFSFLVIL* 265
++E+VK V A+V KGHW + H S S + F + +
Sbjct: 10 DNEMVKAVAAVVFKGHWDNLLKPKIGSSVTSTTIRQALLHISQYYFSLSWSFFQWAESVP 69
Query: 266 MGRFNSMLQPSLQTSWIMICILTKQKHFKSPQSMLQKIALRHF 394
+ SLQ+SW M+ ILTKQKHFK+ Q MLQK+A+++F
Sbjct: 70 SHKH------SLQSSWTMMYILTKQKHFKTAQDMLQKVAVKNF 106
>gb|EXB85827.1| hypothetical protein L484_009673 [Morus notabilis]
Length = 584
Score = 144 bits (363), Expect(2) = 2e-39
Identities = 69/96 (71%), Positives = 82/96 (85%)
Frame = +1
Query: 391 FLSSPMVLNALVLSNSNDPEVNSHVLSWLIIFYADSEMIQVAIQVFDHMRLCGFKPHLHA 570
F+SSP VLNALV ++ ND +VNSHVLSWL+IFYA+S+M Q AIQVFDHMR+ G KPHLHA
Sbjct: 104 FISSPSVLNALVTTH-NDRDVNSHVLSWLVIFYANSKMTQDAIQVFDHMRVRGLKPHLHA 162
Query: 571 CTALLNSLVKDGFCDTVWKVYKNMIKVGVLPNLYIY 678
CT LLNSLVKD D VWKVYK MI+VGV+PN+++Y
Sbjct: 163 CTVLLNSLVKDRLTDMVWKVYKKMIRVGVVPNIHVY 198
Score = 45.1 bits (105), Expect(2) = 2e-39
Identities = 35/102 (34%), Positives = 52/102 (50%), Gaps = 6/102 (5%)
Frame = +2
Query: 107 ESEVVKTVCAIVLKGHWQ-CFEAKDWF-LCDINNHQSNSN*SF----TL*IFSFLVIL*M 268
E++ +++VCA+V+KG W F K L HQ S ++F L +
Sbjct: 4 ETQFIQSVCAVVIKGQWSNLFNPKVGVCLSSTTIHQVLQQLSLHGYGPSPSWAFFNWLEL 63
Query: 269 GRFNSMLQPSLQTSWIMICILTKQKHFKSPQSMLQKIALRHF 394
G N + SLQ +W MI ILTK +HF+ Q +L +I+ R F
Sbjct: 64 GT-NFNYKHSLQCTWTMIHILTKYRHFRPAQQLLARISHRDF 104
>ref|XP_004288209.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g38730-like [Fragaria vesca subsp. vesca]
Length = 589
Score = 135 bits (340), Expect(2) = 8e-38
Identities = 66/96 (68%), Positives = 77/96 (80%)
Frame = +1
Query: 391 FLSSPMVLNALVLSNSNDPEVNSHVLSWLIIFYADSEMIQVAIQVFDHMRLCGFKPHLHA 570
FLSSP VLNAL+ +DP+VNSHVLSWL+I YA+S+M Q AIQV +HMR+ GFKPHLHA
Sbjct: 108 FLSSPSVLNALI-PTQDDPDVNSHVLSWLVITYANSKMTQDAIQVLEHMRVHGFKPHLHA 166
Query: 571 CTALLNSLVKDGFCDTVWKVYKNMIKVGVLPNLYIY 678
CT LLNSLVKD VWKVYK MIK GV+PN++ Y
Sbjct: 167 CTVLLNSLVKDRLISMVWKVYKKMIKGGVVPNIHTY 202
Score = 48.5 bits (114), Expect(2) = 8e-38
Identities = 34/103 (33%), Positives = 52/103 (50%), Gaps = 7/103 (6%)
Frame = +2
Query: 107 ESEVVKTVCAIVLKGHWQCFEAKDWFLCDINN--HQSNSN*SFTL*IFSFLVIL*MGRFN 280
E+++++++ AIVLKGHW C ++ HQ L ++ + L + F
Sbjct: 10 ETQLIQSLFAIVLKGHWSHLLNPKLGSCLTSSAIHQV----LLQLSLYGYTPSLSLSFFK 65
Query: 281 -----SMLQPSLQTSWIMICILTKQKHFKSPQSMLQKIALRHF 394
+ SLQ SW M+ ILTK +HFK+ L+KIA R F
Sbjct: 66 WAESLPNYKHSLQCSWTMVHILTKHRHFKTAHQFLEKIAFRDF 108
>ref|XP_003627859.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355521881|gb|AET02335.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 731
Score = 127 bits (320), Expect(3) = 2e-36
Identities = 59/95 (62%), Positives = 74/95 (77%)
Frame = +1
Query: 394 LSSPMVLNALVLSNSNDPEVNSHVLSWLIIFYADSEMIQVAIQVFDHMRLCGFKPHLHAC 573
LSSP VL +LV + +DPEVNSHVLSW++I YA S+M A+QVF+ M LC KPHLHAC
Sbjct: 110 LSSPSVLTSLVRIH-DDPEVNSHVLSWIVIHYAKSKMTHDAVQVFEQMSLCNLKPHLHAC 168
Query: 574 TALLNSLVKDGFCDTVWKVYKNMIKVGVLPNLYIY 678
T L+NSL+KDG VWKVYK M++ GV+PN+Y+Y
Sbjct: 169 TVLMNSLLKDGITSMVWKVYKRMVQDGVVPNIYVY 203
Score = 38.1 bits (87), Expect(3) = 2e-36
Identities = 17/31 (54%), Positives = 23/31 (74%)
Frame = +2
Query: 296 SLQTSWIMICILTKQKHFKSPQSMLQKIALR 388
SL +SW MI +LTK +HFK+ Q +L K+A R
Sbjct: 77 SLHSSWSMIHMLTKHRHFKTAQQVLDKMAQR 107
Score = 33.9 bits (76), Expect(3) = 2e-36
Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Frame = +3
Query: 150 DTGNVLKPKIGSCVTSTTINQT--XXXXXXXXXXXXXXFYKWVDLIPCYS 293
D N+LKPK S +TSTTI+Q F+KW IP Y+
Sbjct: 26 DWNNLLKPKTASTLTSTTIHQVILHLKQHRYEPFFIFHFFKWAQSIPHYT 75
>gb|EPS67755.1| hypothetical protein M569_07017, partial [Genlisea aurea]
Length = 567
Score = 135 bits (340), Expect(2) = 5e-36
Identities = 63/96 (65%), Positives = 79/96 (82%)
Frame = +1
Query: 391 FLSSPMVLNALVLSNSNDPEVNSHVLSWLIIFYADSEMIQVAIQVFDHMRLCGFKPHLHA 570
FLSSP VLNA+V +DP + +HVLSWL+IFYA+S+M ++QVF+HM +CG+KPHLHA
Sbjct: 92 FLSSPPVLNAVV-DTYHDPYIMAHVLSWLVIFYANSKMNPDSLQVFEHMIVCGYKPHLHA 150
Query: 571 CTALLNSLVKDGFCDTVWKVYKNMIKVGVLPNLYIY 678
CT LLNSLVK+ DTVWK YK M++VGV+PNLYIY
Sbjct: 151 CTVLLNSLVKERLTDTVWKTYKKMLRVGVVPNLYIY 186
Score = 42.4 bits (98), Expect(2) = 5e-36
Identities = 27/97 (27%), Positives = 48/97 (49%), Gaps = 6/97 (6%)
Frame = +2
Query: 122 KTVCAIVLKGHWQCFEAKDWFLCDINNHQSNSN*SFTL*IFSFLVIL*MGRFNSMLQP-- 295
K++CA+VLKGHW I S+S S L + F ++
Sbjct: 1 KSLCAVVLKGHWDTILKPR-----IGTSLSSSFLSQALLVLLPSQFWISWSFFKWIETVP 55
Query: 296 ----SLQTSWIMICILTKQKHFKSPQSMLQKIALRHF 394
SLQ+ W+++C+L +++ F++ + +L K+A+R F
Sbjct: 56 RYKLSLQSYWVVVCVLAQRRRFETARDILHKLAVREF 92
>ref|XP_006430873.1| hypothetical protein CICLE_v10011342mg [Citrus clementina]
gi|557532930|gb|ESR44113.1| hypothetical protein
CICLE_v10011342mg [Citrus clementina]
Length = 592
Score = 125 bits (313), Expect(2) = 7e-36
Identities = 60/96 (62%), Positives = 75/96 (78%)
Frame = +1
Query: 391 FLSSPMVLNALVLSNSNDPEVNSHVLSWLIIFYADSEMIQVAIQVFDHMRLCGFKPHLHA 570
FLS+P VLNALV + +DP+ NSHVLSWL+IFYA+ +M Q A+QVFD MR+ PHLHA
Sbjct: 110 FLSTPSVLNALVKIH-DDPDGNSHVLSWLVIFYANLKMTQDALQVFDQMRVHNLMPHLHA 168
Query: 571 CTALLNSLVKDGFCDTVWKVYKNMIKVGVLPNLYIY 678
CT LLNSL KD D VWKVYK M+K+GV+ N+++Y
Sbjct: 169 CTVLLNSLAKDRLTDMVWKVYKKMVKLGVVANIHLY 204
Score = 52.4 bits (124), Expect(2) = 7e-36
Identities = 40/104 (38%), Positives = 57/104 (54%), Gaps = 8/104 (7%)
Frame = +2
Query: 107 ESEVVKTVCAIVLKGHWQCFEAKDWFLCDINNHQSNSN*SFTL*IFSFLVIL*MG----R 274
+++ +KT+ AIVLKGHW AK ++ S + L +++ I + +
Sbjct: 11 DTKFIKTISAIVLKGHW----AKLLNPNIASSLTSTAIHKVLLNLYNCCHIPSLSCAFFK 66
Query: 275 FNSMLQP----SLQTSWIMICILTKQKHFKSPQSMLQKIALRHF 394
+ P SLQ+ W MI ILTK KHFKS Q+ML+KIALR F
Sbjct: 67 WAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDF 110
>ref|XP_006482334.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g38730-like [Citrus sinensis]
Length = 592
Score = 122 bits (305), Expect(2) = 1e-35
Identities = 58/96 (60%), Positives = 74/96 (77%)
Frame = +1
Query: 391 FLSSPMVLNALVLSNSNDPEVNSHVLSWLIIFYADSEMIQVAIQVFDHMRLCGFKPHLHA 570
FLS+P VLNALV + +DP+ NSHVLSWL+IFYA+ +M Q +QVFD MR+ PHLHA
Sbjct: 110 FLSTPSVLNALVKIH-DDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHA 168
Query: 571 CTALLNSLVKDGFCDTVWKVYKNMIKVGVLPNLYIY 678
CT LLNSL KD D VWKVYK M+++GV+ N+++Y
Sbjct: 169 CTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLY 204
Score = 54.7 bits (130), Expect(2) = 1e-35
Identities = 40/104 (38%), Positives = 58/104 (55%), Gaps = 8/104 (7%)
Frame = +2
Query: 107 ESEVVKTVCAIVLKGHWQCFEAKDWFLCDINNHQSNSN*SFTL*IFSFLVIL*MG----R 274
+++ +KT+ AIVLKGHW AK + ++ S + L +++ I + +
Sbjct: 11 DTKFIKTISAIVLKGHW----AKLLYPNIASSLTSTAIHKVLLNLYNCCHIPSLSCAFFK 66
Query: 275 FNSMLQP----SLQTSWIMICILTKQKHFKSPQSMLQKIALRHF 394
+ P SLQ+ W MI ILTK KHFKS Q+ML+KIALR F
Sbjct: 67 WAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDF 110
>emb|CBI16890.3| unnamed protein product [Vitis vinifera]
Length = 653
Score = 129 bits (324), Expect(2) = 5e-35
Identities = 61/96 (63%), Positives = 78/96 (81%)
Frame = +1
Query: 391 FLSSPMVLNALVLSNSNDPEVNSHVLSWLIIFYADSEMIQVAIQVFDHMRLCGFKPHLHA 570
+LSSP VLNA+V + +DP+ NS +LSWL+IFYA+S M Q AIQVF+HMR+ GFKPHLHA
Sbjct: 131 YLSSPSVLNAVVRIH-DDPDSNSQILSWLVIFYANSRMTQDAIQVFEHMRVHGFKPHLHA 189
Query: 571 CTALLNSLVKDGFCDTVWKVYKNMIKVGVLPNLYIY 678
CT LLNSL K + VWKVYK M++VGV+PN++I+
Sbjct: 190 CTVLLNSLAKARLTNMVWKVYKKMVRVGVVPNIHIF 225
Score = 45.4 bits (106), Expect(2) = 5e-35
Identities = 31/103 (30%), Positives = 49/103 (47%), Gaps = 7/103 (6%)
Frame = +2
Query: 107 ESEVVKTVCAIVLKGHWQCF-------EAKDWFLCDINNHQSNSN*SFTL*IFSFLVIL* 265
E+++ K VC IV+KGHW L + + S + F ++
Sbjct: 35 ETQLAKIVCGIVVKGHWNSLLKPNVGSNLTSTILNQVLLNLSLDGCCVSWAFFKWV---- 90
Query: 266 MGRFNSMLQPSLQTSWIMICILTKQKHFKSPQSMLQKIALRHF 394
N + SLQ+SW MI L K K FK+ Q++L++IA+R +
Sbjct: 91 --ESNLNHKHSLQSSWTMIHTLAKHKQFKTAQNLLERIAVRDY 131
>ref|XP_002279045.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g38730-like [Vitis vinifera]
Length = 590
Score = 129 bits (324), Expect(2) = 5e-35
Identities = 61/96 (63%), Positives = 78/96 (81%)
Frame = +1
Query: 391 FLSSPMVLNALVLSNSNDPEVNSHVLSWLIIFYADSEMIQVAIQVFDHMRLCGFKPHLHA 570
+LSSP VLNA+V + +DP+ NS +LSWL+IFYA+S M Q AIQVF+HMR+ GFKPHLHA
Sbjct: 106 YLSSPSVLNAVVRIH-DDPDSNSQILSWLVIFYANSRMTQDAIQVFEHMRVHGFKPHLHA 164
Query: 571 CTALLNSLVKDGFCDTVWKVYKNMIKVGVLPNLYIY 678
CT LLNSL K + VWKVYK M++VGV+PN++I+
Sbjct: 165 CTVLLNSLAKARLTNMVWKVYKKMVRVGVVPNIHIF 200
Score = 45.4 bits (106), Expect(2) = 5e-35
Identities = 31/103 (30%), Positives = 49/103 (47%), Gaps = 7/103 (6%)
Frame = +2
Query: 107 ESEVVKTVCAIVLKGHWQCF-------EAKDWFLCDINNHQSNSN*SFTL*IFSFLVIL* 265
E+++ K VC IV+KGHW L + + S + F ++
Sbjct: 10 ETQLAKIVCGIVVKGHWNSLLKPNVGSNLTSTILNQVLLNLSLDGCCVSWAFFKWV---- 65
Query: 266 MGRFNSMLQPSLQTSWIMICILTKQKHFKSPQSMLQKIALRHF 394
N + SLQ+SW MI L K K FK+ Q++L++IA+R +
Sbjct: 66 --ESNLNHKHSLQSSWTMIHTLAKHKQFKTAQNLLERIAVRDY 106
>emb|CAN75614.1| hypothetical protein VITISV_022293 [Vitis vinifera]
Length = 590
Score = 129 bits (324), Expect(2) = 8e-35
Identities = 61/96 (63%), Positives = 78/96 (81%)
Frame = +1
Query: 391 FLSSPMVLNALVLSNSNDPEVNSHVLSWLIIFYADSEMIQVAIQVFDHMRLCGFKPHLHA 570
+LSSP VLNA+V + +DP+ NS +LSWL+IFYA+S M Q AIQVF+HMR+ GFKPHLHA
Sbjct: 106 YLSSPSVLNAVVRIH-DDPDSNSQILSWLVIFYANSRMTQDAIQVFEHMRVHGFKPHLHA 164
Query: 571 CTALLNSLVKDGFCDTVWKVYKNMIKVGVLPNLYIY 678
CT LLNSL K + VWKVYK M++VGV+PN++I+
Sbjct: 165 CTVLLNSLAKARLTNMVWKVYKKMVRVGVVPNIHIF 200
Score = 44.7 bits (104), Expect(2) = 8e-35
Identities = 31/103 (30%), Positives = 48/103 (46%), Gaps = 7/103 (6%)
Frame = +2
Query: 107 ESEVVKTVCAIVLKGHWQCF-------EAKDWFLCDINNHQSNSN*SFTL*IFSFLVIL* 265
E+++ K VC IV+KGHW L + + S + F ++
Sbjct: 10 ETQLAKIVCGIVVKGHWNSLLKPNVGSNLTSTILNQVLLNLSLDGCCVSWAFFKWV---- 65
Query: 266 MGRFNSMLQPSLQTSWIMICILTKQKHFKSPQSMLQKIALRHF 394
N SLQ+SW MI L K K FK+ Q++L++IA+R +
Sbjct: 66 --ESNLNHXHSLQSSWTMIHTLAKHKQFKTAQNLLERIAVRDY 106
>ref|XP_002532893.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223527353|gb|EEF29498.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 625
Score = 121 bits (304), Expect(2) = 3e-34
Identities = 57/96 (59%), Positives = 75/96 (78%)
Frame = +1
Query: 391 FLSSPMVLNALVLSNSNDPEVNSHVLSWLIIFYADSEMIQVAIQVFDHMRLCGFKPHLHA 570
FLS+ VL+ALV + +DP++NSHV SWL+I YA+++M Q AIQVF+HM + GF+PHLHA
Sbjct: 109 FLSTQSVLSALVRLH-DDPDINSHVFSWLVIVYANTKMKQEAIQVFEHMMVNGFRPHLHA 167
Query: 571 CTALLNSLVKDGFCDTVWKVYKNMIKVGVLPNLYIY 678
CT LLNSL KD D VWKVYK M ++GV N+++Y
Sbjct: 168 CTVLLNSLAKDRLTDMVWKVYKKMARIGVEANIHVY 203
Score = 50.4 bits (119), Expect(2) = 3e-34
Identities = 36/102 (35%), Positives = 52/102 (50%), Gaps = 6/102 (5%)
Frame = +2
Query: 107 ESEVVKTVCAIVLKGHWQCFEAKDWFLCDINNHQSNSN*SFTL*IFSFLVIL*MGRFNSM 286
E+++V+ +CA V+KG W +C I + + L + S L F +
Sbjct: 10 ETQLVQNICATVIKGGWNNLLRPK--ICSILTASTLHQVLYQLSLHSQGPCLSWALFKWI 67
Query: 287 ------LQPSLQTSWIMICILTKQKHFKSPQSMLQKIALRHF 394
+ SLQ+SW MI ILTK KH K+ QS+L+KIA R F
Sbjct: 68 ESSIPNYKHSLQSSWTMIHILTKFKHLKTAQSLLEKIAYRDF 109
>ref|XP_002329310.1| predicted protein [Populus trichocarpa]
gi|566213342|ref|XP_006373499.1| hypothetical protein
POPTR_0017s14300g [Populus trichocarpa]
gi|550320321|gb|ERP51296.1| hypothetical protein
POPTR_0017s14300g [Populus trichocarpa]
Length = 593
Score = 128 bits (322), Expect(2) = 6e-34
Identities = 59/96 (61%), Positives = 78/96 (81%)
Frame = +1
Query: 391 FLSSPMVLNALVLSNSNDPEVNSHVLSWLIIFYADSEMIQVAIQVFDHMRLCGFKPHLHA 570
FLS+ VL++LV + +DP+VNSHVLSWL+I Y +S+M AIQVF+HMR+ GF+PHLHA
Sbjct: 115 FLSTQSVLSSLVKIH-DDPDVNSHVLSWLVIVYGNSKMTHEAIQVFEHMRVNGFRPHLHA 173
Query: 571 CTALLNSLVKDGFCDTVWKVYKNMIKVGVLPNLYIY 678
CT LLNSL KD DTVWK+YK M+K+GV+ N+++Y
Sbjct: 174 CTVLLNSLAKDRLTDTVWKIYKKMVKLGVVANIHVY 209
Score = 42.4 bits (98), Expect(2) = 6e-34
Identities = 32/105 (30%), Positives = 53/105 (50%), Gaps = 12/105 (11%)
Frame = +2
Query: 116 VVKTVCAIVLKGHWQC-----FEAKDWFLC-------DINNHQSNSN*SFTL*IFSFLVI 259
+++++CA V+KG W+ F + D+ L + H S + S L S+ +
Sbjct: 14 LIQSICASVIKGSWKNLLRPKFGSNDYHLITTTATVRQVLLHLSLYDQSPCL---SWALF 70
Query: 260 L*MGRFNSMLQPSLQTSWIMICILTKQKHFKSPQSMLQKIALRHF 394
+ + SLQ+SW M+ ILTK KHFK+ + L+ IA + F
Sbjct: 71 KWIESSVPNYKHSLQSSWTMLYILTKHKHFKTAHAFLENIAFKDF 115
>gb|EMJ09454.1| hypothetical protein PRUPE_ppa016546mg [Prunus persica]
Length = 589
Score = 147 bits (371), Expect = 3e-33
Identities = 76/106 (71%), Positives = 88/106 (83%)
Frame = +1
Query: 361 KYASKDCT*AFLSSPMVLNALVLSNSNDPEVNSHVLSWLIIFYADSEMIQVAIQVFDHMR 540
K A KD FLSSPMVLNALV +DPEVNSHVLSWL+IFYA+S+M Q AIQVF+HMR
Sbjct: 102 KIAFKD----FLSSPMVLNALV-PIQDDPEVNSHVLSWLVIFYANSKMNQDAIQVFEHMR 156
Query: 541 LCGFKPHLHACTALLNSLVKDGFCDTVWKVYKNMIKVGVLPNLYIY 678
+ GFKPHLHAC+ALLNSLVKD + VWKVYKNMI+ GV+PN++IY
Sbjct: 157 VHGFKPHLHACSALLNSLVKDRLTNMVWKVYKNMIQAGVVPNVHIY 202
>ref|XP_006405706.1| hypothetical protein EUTSA_v10028323mg [Eutrema salsugineum]
gi|557106844|gb|ESQ47159.1| hypothetical protein
EUTSA_v10028323mg [Eutrema salsugineum]
Length = 619
Score = 124 bits (312), Expect(2) = 3e-32
Identities = 58/95 (61%), Positives = 74/95 (77%)
Frame = +1
Query: 394 LSSPMVLNALVLSNSNDPEVNSHVLSWLIIFYADSEMIQVAIQVFDHMRLCGFKPHLHAC 573
LSSP+VL +L+ S DPEV SHV SWLIIFYA S MI +I+VF+ +R CG KPHL AC
Sbjct: 135 LSSPLVLRSLLGGVSQDPEVISHVFSWLIIFYAKSGMINDSIEVFEQIRHCGLKPHLQAC 194
Query: 574 TALLNSLVKDGFCDTVWKVYKNMIKVGVLPNLYIY 678
T LLNSLVK+ DTVWK++K M+K+GV+ N+++Y
Sbjct: 195 TVLLNSLVKERLTDTVWKIFKKMVKLGVVANIHLY 229
Score = 40.8 bits (94), Expect(2) = 3e-32
Identities = 30/106 (28%), Positives = 49/106 (46%), Gaps = 12/106 (11%)
Frame = +2
Query: 107 ESEVVKTVCAIVLKGHWQCF------------EAKDWFLCDINNHQSNSN*SFTL*IFSF 250
E+ + +++C VLKG+W+ + D+++ S + FS+
Sbjct: 33 EALIAQSICGAVLKGNWRNILKHKVDSGLLTSAITTQVISDLSSCSGYGGPSLSWSFFSW 92
Query: 251 LVIL*MGRFNSMLQPSLQTSWIMICILTKQKHFKSPQSMLQKIALR 388
F S + SLQ SW M+ ILTK KHFK+ +L K++ R
Sbjct: 93 T-----DSFPSC-KHSLQCSWKMVLILTKHKHFKTAHHLLDKLSQR 132
>ref|XP_006282941.1| hypothetical protein CARUB_v10007510mg [Capsella rubella]
gi|482551646|gb|EOA15839.1| hypothetical protein
CARUB_v10007510mg [Capsella rubella]
Length = 606
Score = 122 bits (306), Expect(2) = 4e-32
Identities = 57/95 (60%), Positives = 73/95 (76%)
Frame = +1
Query: 394 LSSPMVLNALVLSNSNDPEVNSHVLSWLIIFYADSEMIQVAIQVFDHMRLCGFKPHLHAC 573
LSSP+VL +LV S DPEV SHV SWL+IFYA S M+ +I VF+ +R CG KPHL AC
Sbjct: 112 LSSPLVLRSLVGGVSEDPEVLSHVFSWLMIFYAKSGMVNNSIAVFEQIRSCGLKPHLQAC 171
Query: 574 TALLNSLVKDGFCDTVWKVYKNMIKVGVLPNLYIY 678
T LL+SLVK+ DTVWKV+K M+K+GV+ N+++Y
Sbjct: 172 TVLLSSLVKERLTDTVWKVFKKMVKLGVVANIHVY 206
Score = 42.4 bits (98), Expect(2) = 4e-32
Identities = 30/106 (28%), Positives = 52/106 (49%), Gaps = 12/106 (11%)
Frame = +2
Query: 107 ESEVVKTVCAIVLKGHWQCF---EAKDWFL---------CDINNHQSNSN*SFTL*IFSF 250
E+ + +++C VLKG+W+ +A L +++++ S + +S+
Sbjct: 10 EALIAQSICGAVLKGNWKNILKHKADSGLLKSAIITQVISELSSYSGYGGASLSWSFYSW 69
Query: 251 LVIL*MGRFNSMLQPSLQTSWIMICILTKQKHFKSPQSMLQKIALR 388
L + SLQ+SW MI ILTK KHFK+ +L K++ R
Sbjct: 70 TDSL------PSCKHSLQSSWEMILILTKHKHFKTAHQLLDKLSQR 109
>ref|XP_002870827.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297316663|gb|EFH47086.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 582
Score = 122 bits (305), Expect(2) = 3e-31
Identities = 57/95 (60%), Positives = 72/95 (75%)
Frame = +1
Query: 394 LSSPMVLNALVLSNSNDPEVNSHVLSWLIIFYADSEMIQVAIQVFDHMRLCGFKPHLHAC 573
LSSP+VL +LV S DPEV SHV SWL+IFYA S MI +I VF+ + CG KPHL AC
Sbjct: 112 LSSPLVLRSLVGGVSEDPEVLSHVFSWLMIFYAKSGMINDSIAVFEQIMSCGLKPHLQAC 171
Query: 574 TALLNSLVKDGFCDTVWKVYKNMIKVGVLPNLYIY 678
T LLNSLVK+ DTVWK++K M+K+GV+ N+++Y
Sbjct: 172 TVLLNSLVKERLTDTVWKIFKKMVKLGVVANIHVY 206
Score = 40.0 bits (92), Expect(2) = 3e-31
Identities = 28/106 (26%), Positives = 49/106 (46%), Gaps = 12/106 (11%)
Frame = +2
Query: 107 ESEVVKTVCAIVLKGHWQCF------------EAKDWFLCDINNHQSNSN*SFTL*IFSF 250
E+ + +++CA VLKG+W+ + +++ + S + +S+
Sbjct: 10 EALIAQSICATVLKGNWKNILKHKVDSGLLKSSIITQVISELSLYSGYGGPSLSWSFYSW 69
Query: 251 LVIL*MGRFNSMLQPSLQTSWIMICILTKQKHFKSPQSMLQKIALR 388
L + SLQ+SW MI ILTK HFK+ +L K++ R
Sbjct: 70 TDSL------PSCKHSLQSSWKMILILTKHNHFKTAHQLLDKLSQR 109
>ref|NP_198689.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171307|sp|Q9FKR3.1|PP404_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At5g38730 gi|10176899|dbj|BAB10131.1| unnamed protein
product [Arabidopsis thaliana]
gi|332006971|gb|AED94354.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 596
Score = 118 bits (295), Expect(2) = 5e-31
Identities = 55/95 (57%), Positives = 71/95 (74%)
Frame = +1
Query: 394 LSSPMVLNALVLSNSNDPEVNSHVLSWLIIFYADSEMIQVAIQVFDHMRLCGFKPHLHAC 573
LSSP+VL +LV S DPE SHV SWL+I+YA + MI +I VF+ +R CG KPHL AC
Sbjct: 112 LSSPLVLRSLVGGVSEDPEDVSHVFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQAC 171
Query: 574 TALLNSLVKDGFCDTVWKVYKNMIKVGVLPNLYIY 678
T LLNSLVK DTVWK++K M+K+GV+ N+++Y
Sbjct: 172 TVLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVY 206
Score = 43.1 bits (100), Expect(2) = 5e-31
Identities = 34/112 (30%), Positives = 51/112 (45%), Gaps = 18/112 (16%)
Frame = +2
Query: 107 ESEVVKTVCAIVLKGHWQCFEAKDWFLCDINNHQSNSN*SFTL*IFSFLVIL*MGRFNSM 286
E+ + +++CA VLKG+W+ +I H+ +S + VI + F+
Sbjct: 10 EALIAQSICATVLKGNWK----------NILKHKVDSG--LLKSAITTQVISELSLFSGY 57
Query: 287 LQPSL------------------QTSWIMICILTKQKHFKSPQSMLQKIALR 388
PSL Q+SW MI ILTK KHFK+ +L K+A R
Sbjct: 58 GGPSLSWSFFIWTDSLPSSKHSLQSSWKMILILTKHKHFKTAHQLLDKLAQR 109
>ref|XP_004140465.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g38730-like [Cucumis sativus]
gi|449518107|ref|XP_004166085.1| PREDICTED:
pentatricopeptide repeat-containing protein
At5g38730-like [Cucumis sativus]
Length = 578
Score = 132 bits (332), Expect = 1e-28
Identities = 67/106 (63%), Positives = 82/106 (77%)
Frame = +1
Query: 361 KYASKDCT*AFLSSPMVLNALVLSNSNDPEVNSHVLSWLIIFYADSEMIQVAIQVFDHMR 540
K A KD F+SSP+VLNALV S N P+VN+H+LSWL+I Y + +M Q AIQV ++MR
Sbjct: 93 KIAHKD----FISSPLVLNALVTSYDN-PDVNAHILSWLMIIYVNCKMPQDAIQVLEYMR 147
Query: 541 LCGFKPHLHACTALLNSLVKDGFCDTVWKVYKNMIKVGVLPNLYIY 678
L GFKP+LHACT LLNSL KD DTVWK YK MI+VGV+PN++IY
Sbjct: 148 LHGFKPNLHACTVLLNSLAKDRLTDTVWKSYKKMIRVGVVPNIHIY 193
>ref|XP_003545840.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g38730-like [Glycine max]
Length = 587
Score = 128 bits (322), Expect = 1e-27
Identities = 67/106 (63%), Positives = 79/106 (74%)
Frame = +1
Query: 361 KYASKDCT*AFLSSPMVLNALVLSNSNDPEVNSHVLSWLIIFYADSEMIQVAIQVFDHMR 540
K A KD FLSSP VL+ LV ++ N EVNS VLSWL+I YA S+M Q AIQVF+ MR
Sbjct: 99 KIAHKD----FLSSPSVLSTLVRTHDNQ-EVNSQVLSWLVIHYAKSKMTQDAIQVFEQMR 153
Query: 541 LCGFKPHLHACTALLNSLVKDGFCDTVWKVYKNMIKVGVLPNLYIY 678
L KPHLHACT LLNSL+KDG VWK+YK M++VGV+PN+YIY
Sbjct: 154 LHEVKPHLHACTVLLNSLLKDGVTHMVWKIYKRMVQVGVVPNIYIY 199