BLASTX nr result

ID: Catharanthus22_contig00018990 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00018990
         (210 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003591130.1| DNA (cytosine-5)-methyltransferase 3B [Medic...    52   4e-06
gb|AAD24567.1|AF120335_1 putative transposase [Arabidopsis thali...    55   7e-06
gb|AAF19546.1|AC007190_14 F23N19.13 [Arabidopsis thaliana]             55   7e-06
gb|AAF79835.1|AC026875_15 T6D22.19 [Arabidopsis thaliana]              55   7e-06

>ref|XP_003591130.1| DNA (cytosine-5)-methyltransferase 3B [Medicago truncatula]
           gi|355480178|gb|AES61381.1| DNA
           (cytosine-5)-methyltransferase 3B [Medicago truncatula]
          Length = 722

 Score = 52.0 bits (123), Expect(2) = 4e-06
 Identities = 20/37 (54%), Positives = 32/37 (86%)
 Frame = -3

Query: 208 YFHVRCNSHILNMIVRNGLKAISAPIYKVRESVEYVR 98
           +FH+RC++HILN+IV++ LK +S  ++K+R+SV YVR
Sbjct: 479 FFHIRCSTHILNLIVQDRLKVVSDALHKIRQSVAYVR 515



 Score = 24.3 bits (51), Expect(2) = 4e-06
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = -2

Query: 98  RPQSRQLKFVECVRH 54
           R QSR L+F ECVR+
Sbjct: 515 REQSRTLQFFECVRN 529


>gb|AAD24567.1|AF120335_1 putative transposase [Arabidopsis thaliana]
          Length = 577

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 22/38 (57%), Positives = 34/38 (89%)
 Frame = -3

Query: 208 YFHVRCNSHILNMIVRNGLKAISAPIYKVRESVEYVRG 95
           +FHVRC++HILN+IV++GL+ IS  + K+RE+V+YV+G
Sbjct: 192 FFHVRCSAHILNLIVQDGLEVISGALEKIRETVKYVKG 229


>gb|AAF19546.1|AC007190_14 F23N19.13 [Arabidopsis thaliana]
          Length = 633

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 22/38 (57%), Positives = 34/38 (89%)
 Frame = -3

Query: 208 YFHVRCNSHILNMIVRNGLKAISAPIYKVRESVEYVRG 95
           +FHVRC++HILN+IV++GL+ IS  + K+RE+V+YV+G
Sbjct: 285 FFHVRCSAHILNLIVQDGLEVISGALEKIRETVKYVKG 322


>gb|AAF79835.1|AC026875_15 T6D22.19 [Arabidopsis thaliana]
          Length = 745

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 22/38 (57%), Positives = 34/38 (89%)
 Frame = -3

Query: 208 YFHVRCNSHILNMIVRNGLKAISAPIYKVRESVEYVRG 95
           +FHVRC++HILN+IV++GL+ IS  + K+RE+V+YV+G
Sbjct: 375 FFHVRCSAHILNLIVQDGLEVISGALEKIRETVKYVKG 412


Top