BLASTX nr result

ID: Catharanthus22_contig00018733 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00018733
         (739 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003588337.1| Ribosomal protein S10 [Medicago truncatula] ...   112   2e-45
ref|XP_003588412.1| Ribosomal protein S10 [Medicago truncatula] ...   112   1e-26
ref|XP_006850268.1| hypothetical protein AMTR_s00020p00100020 [A...   111   5e-26
emb|CBI31112.3| unnamed protein product [Vitis vinifera]               74   6e-26
ref|XP_003588310.1| hypothetical protein MTR_1g005810 [Medicago ...   108   2e-21
emb|CBI40707.3| unnamed protein product [Vitis vinifera]              101   3e-19
emb|CAN65166.1| hypothetical protein VITISV_029400 [Vitis vinifera]    84   1e-16
ref|XP_002535058.1| conserved hypothetical protein [Ricinus comm...    57   8e-06

>ref|XP_003588337.1| Ribosomal protein S10 [Medicago truncatula]
            gi|355477385|gb|AES58588.1| Ribosomal protein S10
            [Medicago truncatula]
          Length = 1152

 Score =  112 bits (280), Expect(2) = 2e-45
 Identities = 66/97 (68%), Positives = 66/97 (68%)
 Frame = +2

Query: 371  LGRRRSKKRRLTLGSLTYY*KGKGATYLTNNKKGGEIGKR*LASKPARPRGIKRSLPVLT 550
            LGRRRSKKRRLTL                            LASKPARPRGIKRSLPVLT
Sbjct: 1016 LGRRRSKKRRLTLLK--------------------------LASKPARPRGIKRSLPVLT 1049

Query: 551  WISGDGIRRPEATSSRGRSLALADRLAVSLATAKRLP 661
            WISGDG RRPE TSSRGRSLAL DRLAVSLATAKRLP
Sbjct: 1050 WISGDGKRRPEVTSSRGRSLALGDRLAVSLATAKRLP 1086



 Score = 97.1 bits (240), Expect(2) = 2e-45
 Identities = 46/52 (88%), Positives = 48/52 (92%), Gaps = 1/52 (1%)
 Frame = +3

Query: 207  FSFRFTECDLGHDGSLRASVGKRSPEYSTRSP-LLAAMGSTCEQGKPNGNQR 359
            F FRFTECDLGHDG LRASVGKRSPEYSTRSP  LAAMGSTC+QGKPNGNQ+
Sbjct: 957  FPFRFTECDLGHDGGLRASVGKRSPEYSTRSPFFLAAMGSTCKQGKPNGNQK 1008


>ref|XP_003588412.1| Ribosomal protein S10 [Medicago truncatula]
           gi|355477460|gb|AES58663.1| Ribosomal protein S10
           [Medicago truncatula]
          Length = 159

 Score =  112 bits (280), Expect(2) = 1e-26
 Identities = 66/97 (68%), Positives = 66/97 (68%)
 Frame = +2

Query: 371 LGRRRSKKRRLTLGSLTYY*KGKGATYLTNNKKGGEIGKR*LASKPARPRGIKRSLPVLT 550
           LGRRRSKKRRLTL                            LASKPARPRGIKRSLPVLT
Sbjct: 23  LGRRRSKKRRLTLLK--------------------------LASKPARPRGIKRSLPVLT 56

Query: 551 WISGDGIRRPEATSSRGRSLALADRLAVSLATAKRLP 661
           WISGDG RRPE TSSRGRSLAL DRLAVSLATAKRLP
Sbjct: 57  WISGDGKRRPEVTSSRGRSLALGDRLAVSLATAKRLP 93



 Score = 34.7 bits (78), Expect(2) = 1e-26
 Identities = 13/15 (86%), Positives = 15/15 (100%)
 Frame = +3

Query: 315 MGSTCEQGKPNGNQR 359
           MGSTC+QGKPNGNQ+
Sbjct: 1   MGSTCKQGKPNGNQK 15


>ref|XP_006850268.1| hypothetical protein AMTR_s00020p00100020 [Amborella trichopoda]
           gi|548853889|gb|ERN11849.1| hypothetical protein
           AMTR_s00020p00100020 [Amborella trichopoda]
          Length = 85

 Score =  111 bits (278), Expect(2) = 5e-26
 Identities = 53/70 (75%), Positives = 55/70 (78%)
 Frame = -1

Query: 373 QCGTPLWFPLGLPCSQVDPMAASKGDLVLYSGDLFPTEARKLPSCPRSHSVNRKEKPTHL 194
           +C    WFPLGLPCSQVDP A  KGDLVLYS DL PTEA KLPSCP+SHSVNRK KPTH 
Sbjct: 2   RCPPVFWFPLGLPCSQVDPNAVRKGDLVLYSDDLLPTEACKLPSCPKSHSVNRKGKPTHP 61

Query: 193 SAPLVDRCGF 164
           SAPLVD   F
Sbjct: 62  SAPLVDAVWF 71



 Score = 33.1 bits (74), Expect(2) = 5e-26
 Identities = 15/15 (100%), Positives = 15/15 (100%)
 Frame = -3

Query: 167 FYEASKHSSLALINQ 123
           FYEASKHSSLALINQ
Sbjct: 71  FYEASKHSSLALINQ 85


>emb|CBI31112.3| unnamed protein product [Vitis vinifera]
          Length = 2099

 Score = 73.6 bits (179), Expect(3) = 6e-26
 Identities = 34/36 (94%), Positives = 35/36 (97%)
 Frame = +3

Query: 252  LRASVGKRSPEYSTRSPLLAAMGSTCEQGKPNGNQR 359
            LRASVGKRSPEYSTRSP LAAMGSTCEQGKPNGNQ+
Sbjct: 1775 LRASVGKRSPEYSTRSPFLAAMGSTCEQGKPNGNQK 1810



 Score = 48.9 bits (115), Expect(3) = 6e-26
 Identities = 23/25 (92%), Positives = 24/25 (96%)
 Frame = +2

Query: 485  KR*LASKPARPRGIKRSLPVLTWIS 559
            +R LASKPARPRGIKRSLPVLTWIS
Sbjct: 1855 RRQLASKPARPRGIKRSLPVLTWIS 1879



 Score = 42.0 bits (97), Expect(3) = 6e-26
 Identities = 25/43 (58%), Positives = 26/43 (60%), Gaps = 7/43 (16%)
 Frame = +1

Query: 334  KVNPMGTKGGYRIGQKTIQKAKAHPWKLN-------LLLKGER 441
            K N     GGYRIGQKTIQKAKAHP +         LL KGER
Sbjct: 1804 KPNGNQKMGGYRIGQKTIQKAKAHPAEGRSFDLTPLLLFKGER 1846


>ref|XP_003588310.1| hypothetical protein MTR_1g005810 [Medicago truncatula]
           gi|355477358|gb|AES58561.1| hypothetical protein
           MTR_1g005810 [Medicago truncatula]
          Length = 146

 Score =  108 bits (269), Expect = 2e-21
 Identities = 52/57 (91%), Positives = 52/57 (91%)
 Frame = -1

Query: 304 KGDLVLYSGDLFPTEARKLPSCPRSHSVNRKEKPTHLSAPLVDRCGFTKRLSTVHSR 134
           KGDLVLYSG  FPTEARK PSCPRSHSVNRK KPTH SAPLVDRCGFTKRLSTVHSR
Sbjct: 90  KGDLVLYSGIFFPTEARKPPSCPRSHSVNRKGKPTHPSAPLVDRCGFTKRLSTVHSR 146



 Score =  106 bits (264), Expect = 9e-21
 Identities = 55/58 (94%), Positives = 55/58 (94%)
 Frame = -2

Query: 660 GKRFAVAKLTASLSARAKLRPRLLVASGRLIPSPEIQVSTGKDLLIPRGRAGLEASYL 487
           GKRFAVAKLTASLS RAKLRPRLLV SGRL PSPEIQVSTGKDLLIPRGRAGLEASYL
Sbjct: 23  GKRFAVAKLTASLSPRAKLRPRLLVTSGRLFPSPEIQVSTGKDLLIPRGRAGLEASYL 80


>emb|CBI40707.3| unnamed protein product [Vitis vinifera]
          Length = 574

 Score =  101 bits (251), Expect = 3e-19
 Identities = 47/53 (88%), Positives = 48/53 (90%)
 Frame = +3

Query: 201 VGFSFRFTECDLGHDGSLRASVGKRSPEYSTRSPLLAAMGSTCEQGKPNGNQR 359
           VGF FRF ECDLGHDGSLRASVGKRS EYSTRSP LA MGSTCEQGKPNGNQ+
Sbjct: 515 VGFLFRFIECDLGHDGSLRASVGKRSSEYSTRSPFLATMGSTCEQGKPNGNQK 567


>emb|CAN65166.1| hypothetical protein VITISV_029400 [Vitis vinifera]
          Length = 267

 Score = 61.6 bits (148), Expect(2) = 1e-16
 Identities = 32/49 (65%), Positives = 34/49 (69%), Gaps = 11/49 (22%)
 Frame = -1

Query: 352 FPLGLPCSQ-----------VDPMAASKGDLVLYSGDLFPTEARKLPSC 239
           +P+GL  S            VDPMAA KGDLVLYSGDLFPTEARKLPSC
Sbjct: 94  YPIGLEASYLSPISRPFNFLVDPMAARKGDLVLYSGDLFPTEARKLPSC 142



 Score = 51.6 bits (122), Expect(2) = 1e-16
 Identities = 28/49 (57%), Positives = 30/49 (61%)
 Frame = -3

Query: 248 PIVSQITFREXXXXXXXXXXXXXXXXRFYEASKHSSLALINQKVCRHSL 102
           P  +QITFRE                RFYEASKHSSLALINQ+ CRHSL
Sbjct: 140 PSCTQITFRESKGEAYSSISSSRRSVRFYEASKHSSLALINQEFCRHSL 188



 Score = 83.6 bits (205), Expect = 6e-14
 Identities = 42/42 (100%), Positives = 42/42 (100%)
 Frame = -2

Query: 615 RAKLRPRLLVASGRLIPSPEIQVSTGKDLLIPRGRAGLEASY 490
           RAKLRPRLLVASGRLIPSPEIQVSTGKDLLIPRGRAGLEASY
Sbjct: 38  RAKLRPRLLVASGRLIPSPEIQVSTGKDLLIPRGRAGLEASY 79


>ref|XP_002535058.1| conserved hypothetical protein [Ricinus communis]
           gi|223524110|gb|EEF27319.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 65

 Score = 56.6 bits (135), Expect = 8e-06
 Identities = 29/29 (100%), Positives = 29/29 (100%)
 Frame = +2

Query: 575 RPEATSSRGRSLALADRLAVSLATAKRLP 661
           RPEATSSRGRSLALADRLAVSLATAKRLP
Sbjct: 28  RPEATSSRGRSLALADRLAVSLATAKRLP 56


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