BLASTX nr result
ID: Catharanthus22_contig00018587
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00018587
(277 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P30155.1|RK27_TOBAC RecName: Full=50S ribosomal protein L27, ... 105 5e-21
ref|XP_004251089.1| PREDICTED: LOW QUALITY PROTEIN: 50S ribosoma... 104 1e-20
ref|XP_006362856.1| PREDICTED: LOW QUALITY PROTEIN: 50S ribosoma... 103 2e-20
ref|XP_006848248.1| hypothetical protein AMTR_s00013p00039290 [A... 98 1e-18
ref|XP_004138618.1| PREDICTED: 50S ribosomal protein L27, chloro... 94 2e-17
ref|XP_002270270.1| PREDICTED: 50S ribosomal protein L27, chloro... 93 4e-17
emb|CAN67770.1| hypothetical protein VITISV_010521 [Vitis vinifera] 93 4e-17
gb|EOY02823.1| Ribosomal protein large subunit 27 [Theobroma cacao] 92 9e-17
gb|ABR17726.1| unknown [Picea sitchensis] 92 9e-17
ref|XP_003538227.1| PREDICTED: 50S ribosomal protein L27, chloro... 91 1e-16
gb|EXC33368.1| 50S ribosomal protein L27 [Morus notabilis] 91 2e-16
gb|EPS70927.1| hypothetical protein M569_03836 [Genlisea aurea] 91 2e-16
ref|NP_198911.1| 50S ribosomal protein L27 [Arabidopsis thaliana... 90 4e-16
ref|XP_002870663.1| hypothetical protein ARALYDRAFT_493880 [Arab... 90 4e-16
gb|AAM62675.1| 50S ribosomal protein L27 [Arabidopsis thaliana] 90 4e-16
ref|XP_006405411.1| hypothetical protein EUTSA_v10027943mg [Eutr... 89 5e-16
gb|ACQ90306.1| auxin-repressed protein 1 [Brassica rapa subsp. p... 89 5e-16
ref|XP_006284558.1| hypothetical protein CARUB_v10005779mg [Caps... 89 6e-16
ref|XP_004303965.1| PREDICTED: 50S ribosomal protein L27, chloro... 87 3e-15
ref|XP_002509506.1| ribosomal protein L27, putative [Ricinus com... 87 3e-15
>sp|P30155.1|RK27_TOBAC RecName: Full=50S ribosomal protein L27, chloroplastic; AltName:
Full=CL27; Flags: Precursor gi|170306|gb|AAA34104.1|
ribosomal protein L27 [Nicotiana tabacum]
gi|170326|gb|AAA34115.1| ribosomal protein L27
[Nicotiana tabacum]
Length = 179
Score = 105 bits (263), Expect = 5e-21
Identities = 52/55 (94%), Positives = 53/55 (96%)
Frame = +3
Query: 111 VGHKFSVSFPLKSPLTIESAHKKGAGSTKNGRDSPGQRLGVKIFGDQVAKPGAII 275
V KFSVSFPLKSPLTIESAHKKGAGSTKNGRDSPGQRLGVKIFGDQVAKPG+II
Sbjct: 33 VAPKFSVSFPLKSPLTIESAHKKGAGSTKNGRDSPGQRLGVKIFGDQVAKPGSII 87
>ref|XP_004251089.1| PREDICTED: LOW QUALITY PROTEIN: 50S ribosomal protein L27,
chloroplastic-like [Solanum lycopersicum]
Length = 173
Score = 104 bits (259), Expect = 1e-20
Identities = 50/55 (90%), Positives = 53/55 (96%)
Frame = +3
Query: 111 VGHKFSVSFPLKSPLTIESAHKKGAGSTKNGRDSPGQRLGVKIFGDQVAKPGAII 275
+ KFSVSFPLKSPLTIESAHKKGAGSTKNGRDSPGQRLGVKI+GDQVAKPG+II
Sbjct: 28 IAPKFSVSFPLKSPLTIESAHKKGAGSTKNGRDSPGQRLGVKIYGDQVAKPGSII 82
>ref|XP_006362856.1| PREDICTED: LOW QUALITY PROTEIN: 50S ribosomal protein L27,
chloroplastic-like [Solanum tuberosum]
Length = 173
Score = 103 bits (258), Expect = 2e-20
Identities = 49/55 (89%), Positives = 53/55 (96%)
Frame = +3
Query: 111 VGHKFSVSFPLKSPLTIESAHKKGAGSTKNGRDSPGQRLGVKIFGDQVAKPGAII 275
+ KFS+SFPLKSPLTIESAHKKGAGSTKNGRDSPGQRLGVKI+GDQVAKPG+II
Sbjct: 28 IAPKFSISFPLKSPLTIESAHKKGAGSTKNGRDSPGQRLGVKIYGDQVAKPGSII 82
>ref|XP_006848248.1| hypothetical protein AMTR_s00013p00039290 [Amborella trichopoda]
gi|548851554|gb|ERN09829.1| hypothetical protein
AMTR_s00013p00039290 [Amborella trichopoda]
Length = 187
Score = 97.8 bits (242), Expect = 1e-18
Identities = 54/90 (60%), Positives = 59/90 (65%)
Frame = +3
Query: 6 AAACVHFNLVGAFXXXXXXXXXXXXXXXXXXXXVHVGHKFSVSFPLKSPLTIESAHKKGA 185
+AA FNLVGAF V + S+SF LK PL IE+AHKKGA
Sbjct: 3 SAATCSFNLVGAFKGLSLLPSSSSSCFRGDFRVPSVTNGSSLSFTLKFPLIIEAAHKKGA 62
Query: 186 GSTKNGRDSPGQRLGVKIFGDQVAKPGAII 275
GSTKNGRDSPGQRLGVKI+GDQVAKPGAII
Sbjct: 63 GSTKNGRDSPGQRLGVKIYGDQVAKPGAII 92
>ref|XP_004138618.1| PREDICTED: 50S ribosomal protein L27, chloroplastic-like isoform 1
[Cucumis sativus] gi|449441698|ref|XP_004138619.1|
PREDICTED: 50S ribosomal protein L27, chloroplastic-like
isoform 2 [Cucumis sativus]
gi|449518795|ref|XP_004166421.1| PREDICTED: 50S
ribosomal protein L27, chloroplastic-like isoform 1
[Cucumis sativus] gi|449518797|ref|XP_004166422.1|
PREDICTED: 50S ribosomal protein L27, chloroplastic-like
isoform 2 [Cucumis sativus]
Length = 183
Score = 94.0 bits (232), Expect = 2e-17
Identities = 46/57 (80%), Positives = 49/57 (85%)
Frame = +3
Query: 105 VHVGHKFSVSFPLKSPLTIESAHKKGAGSTKNGRDSPGQRLGVKIFGDQVAKPGAII 275
+H K SVSFP PLTIE+AHKKGAGSTKNGRDS GQRLGVKIFGDQVAKPG+II
Sbjct: 28 IHTSPKLSVSFPNIFPLTIENAHKKGAGSTKNGRDSKGQRLGVKIFGDQVAKPGSII 84
>ref|XP_002270270.1| PREDICTED: 50S ribosomal protein L27, chloroplastic [Vitis
vinifera] gi|296082339|emb|CBI21344.3| unnamed protein
product [Vitis vinifera]
Length = 186
Score = 92.8 bits (229), Expect = 4e-17
Identities = 48/53 (90%), Positives = 49/53 (92%), Gaps = 1/53 (1%)
Frame = +3
Query: 120 KFSVSFPLKS-PLTIESAHKKGAGSTKNGRDSPGQRLGVKIFGDQVAKPGAII 275
K VSFPLKS PLTIESAHKKGAGSTKNGRDS GQRLGVKI+GDQVAKPGAII
Sbjct: 34 KLCVSFPLKSLPLTIESAHKKGAGSTKNGRDSRGQRLGVKIYGDQVAKPGAII 86
>emb|CAN67770.1| hypothetical protein VITISV_010521 [Vitis vinifera]
Length = 186
Score = 92.8 bits (229), Expect = 4e-17
Identities = 48/53 (90%), Positives = 49/53 (92%), Gaps = 1/53 (1%)
Frame = +3
Query: 120 KFSVSFPLKS-PLTIESAHKKGAGSTKNGRDSPGQRLGVKIFGDQVAKPGAII 275
K VSFPLKS PLTIESAHKKGAGSTKNGRDS GQRLGVKI+GDQVAKPGAII
Sbjct: 34 KLCVSFPLKSLPLTIESAHKKGAGSTKNGRDSRGQRLGVKIYGDQVAKPGAII 86
>gb|EOY02823.1| Ribosomal protein large subunit 27 [Theobroma cacao]
Length = 191
Score = 91.7 bits (226), Expect = 9e-17
Identities = 55/93 (59%), Positives = 58/93 (62%), Gaps = 2/93 (2%)
Frame = +3
Query: 3 MAAACVHFNLVGAFXXXXXXXXXXXXXXXXXXXXVHVGHKFSVSFPLKSP--LTIESAHK 176
MA A + FNLVGAF + + SFP KSP LTIESAHK
Sbjct: 1 MATATMSFNLVGAFRGLSLSSSSTSSFLKGELGSIP--KTATASFPRKSPFPLTIESAHK 58
Query: 177 KGAGSTKNGRDSPGQRLGVKIFGDQVAKPGAII 275
KGAGSTKNGRDS GQRLGVKIFGDQ AKPGAII
Sbjct: 59 KGAGSTKNGRDSRGQRLGVKIFGDQAAKPGAII 91
>gb|ABR17726.1| unknown [Picea sitchensis]
Length = 194
Score = 91.7 bits (226), Expect = 9e-17
Identities = 52/90 (57%), Positives = 59/90 (65%), Gaps = 1/90 (1%)
Frame = +3
Query: 9 AACVHFNLVGAFXXXXXXXXXXXXXXXXXXXX-VHVGHKFSVSFPLKSPLTIESAHKKGA 185
AA NLVGAF V VG + +VSFPLK PL IE+AHKKG+
Sbjct: 4 AAVASCNLVGAFKGLSISSGSSSSSYLKGDLKLVTVGQRSTVSFPLKVPLIIEAAHKKGS 63
Query: 186 GSTKNGRDSPGQRLGVKIFGDQVAKPGAII 275
GSTKNGRDS G+RLGVKI+GDQVAKPG+II
Sbjct: 64 GSTKNGRDSIGKRLGVKIYGDQVAKPGSII 93
>ref|XP_003538227.1| PREDICTED: 50S ribosomal protein L27, chloroplastic-like [Glycine
max]
Length = 194
Score = 91.3 bits (225), Expect = 1e-16
Identities = 48/90 (53%), Positives = 56/90 (62%)
Frame = +3
Query: 6 AAACVHFNLVGAFXXXXXXXXXXXXXXXXXXXXVHVGHKFSVSFPLKSPLTIESAHKKGA 185
A+ C+ FNL AF + G VS P + PLTIE+AHKKGA
Sbjct: 5 ASMCMSFNLATAFKGLSFSSSSSSFFAGSGSYSLRAGPTSVVSLPRRCPLTIENAHKKGA 64
Query: 186 GSTKNGRDSPGQRLGVKIFGDQVAKPGAII 275
GSTKNGRDS G+RLGVKI+GDQVAKPG+II
Sbjct: 65 GSTKNGRDSQGKRLGVKIYGDQVAKPGSII 94
>gb|EXC33368.1| 50S ribosomal protein L27 [Morus notabilis]
Length = 196
Score = 90.9 bits (224), Expect = 2e-16
Identities = 55/95 (57%), Positives = 60/95 (63%), Gaps = 4/95 (4%)
Frame = +3
Query: 3 MAAACVHFNLVGAFXXXXXXXXXXXXXXXXXXXX---VHVG-HKFSVSFPLKSPLTIESA 170
MAA + FNLVGAF + VG +K S S P + PL IESA
Sbjct: 1 MAAVSMSFNLVGAFKGLSMSSSSSSSSSSFVRGNFGSLVVGPNKLSFSCPQRFPLIIESA 60
Query: 171 HKKGAGSTKNGRDSPGQRLGVKIFGDQVAKPGAII 275
HKKGAGSTKNGRDS GQRLGVKIFGDQVAKPG+II
Sbjct: 61 HKKGAGSTKNGRDSKGQRLGVKIFGDQVAKPGSII 95
>gb|EPS70927.1| hypothetical protein M569_03836 [Genlisea aurea]
Length = 181
Score = 90.5 bits (223), Expect = 2e-16
Identities = 43/52 (82%), Positives = 48/52 (92%)
Frame = +3
Query: 120 KFSVSFPLKSPLTIESAHKKGAGSTKNGRDSPGQRLGVKIFGDQVAKPGAII 275
K +VS P+KSP TIESAHKKGAGSTKNGRDSPGQRLGVK+FGDQ+AK G+II
Sbjct: 40 KVAVSVPMKSPPTIESAHKKGAGSTKNGRDSPGQRLGVKVFGDQLAKAGSII 91
>ref|NP_198911.1| 50S ribosomal protein L27 [Arabidopsis thaliana]
gi|20139726|sp|Q9FLN4.1|RK27_ARATH RecName: Full=50S
ribosomal protein L27, chloroplastic; AltName:
Full=CL27; Flags: Precursor gi|189096146|pdb|3BBO|X
Chain X, Homology Model For The Spinach Chloroplast 50s
Subunit Fitted To 9.4a Cryo-Em Map Of The 70s
Chlororibosome gi|9759141|dbj|BAB09697.1| 50S ribosomal
protein L27 [Arabidopsis thaliana]
gi|15028249|gb|AAK76713.1| putative 50S ribosomal
protein L27 [Arabidopsis thaliana]
gi|21436345|gb|AAM51342.1| putative 50S ribosomal
protein L27 [Arabidopsis thaliana]
gi|332007235|gb|AED94618.1| 50S ribosomal protein L27
[Arabidopsis thaliana]
Length = 198
Score = 89.7 bits (221), Expect = 4e-16
Identities = 45/56 (80%), Positives = 50/56 (89%), Gaps = 5/56 (8%)
Frame = +3
Query: 123 FSVSFPLKS-----PLTIESAHKKGAGSTKNGRDSPGQRLGVKIFGDQVAKPGAII 275
F+V+ PL++ PLTIESAHKKGAGSTKNGRDSPGQRLGVKI+GDQVAKPGAII
Sbjct: 39 FTVTLPLENLQAPIPLTIESAHKKGAGSTKNGRDSPGQRLGVKIYGDQVAKPGAII 94
>ref|XP_002870663.1| hypothetical protein ARALYDRAFT_493880 [Arabidopsis lyrata subsp.
lyrata] gi|297316499|gb|EFH46922.1| hypothetical protein
ARALYDRAFT_493880 [Arabidopsis lyrata subsp. lyrata]
Length = 198
Score = 89.7 bits (221), Expect = 4e-16
Identities = 45/56 (80%), Positives = 50/56 (89%), Gaps = 5/56 (8%)
Frame = +3
Query: 123 FSVSFPLKS-----PLTIESAHKKGAGSTKNGRDSPGQRLGVKIFGDQVAKPGAII 275
F+V+ PL++ PLTIESAHKKGAGSTKNGRDSPGQRLGVKI+GDQVAKPGAII
Sbjct: 39 FTVTLPLENLQAPIPLTIESAHKKGAGSTKNGRDSPGQRLGVKIYGDQVAKPGAII 94
>gb|AAM62675.1| 50S ribosomal protein L27 [Arabidopsis thaliana]
Length = 196
Score = 89.7 bits (221), Expect = 4e-16
Identities = 45/56 (80%), Positives = 50/56 (89%), Gaps = 5/56 (8%)
Frame = +3
Query: 123 FSVSFPLKS-----PLTIESAHKKGAGSTKNGRDSPGQRLGVKIFGDQVAKPGAII 275
F+V+ PL++ PLTIESAHKKGAGSTKNGRDSPGQRLGVKI+GDQVAKPGAII
Sbjct: 37 FTVTLPLENLQAPVPLTIESAHKKGAGSTKNGRDSPGQRLGVKIYGDQVAKPGAII 92
>ref|XP_006405411.1| hypothetical protein EUTSA_v10027943mg [Eutrema salsugineum]
gi|557106549|gb|ESQ46864.1| hypothetical protein
EUTSA_v10027943mg [Eutrema salsugineum]
Length = 198
Score = 89.4 bits (220), Expect = 5e-16
Identities = 45/56 (80%), Positives = 49/56 (87%), Gaps = 5/56 (8%)
Frame = +3
Query: 123 FSVSFPLKS-----PLTIESAHKKGAGSTKNGRDSPGQRLGVKIFGDQVAKPGAII 275
F+V+ PL+ PLTIESAHKKGAGSTKNGRDSPGQRLGVKI+GDQVAKPGAII
Sbjct: 39 FTVTLPLEKLQAPIPLTIESAHKKGAGSTKNGRDSPGQRLGVKIYGDQVAKPGAII 94
>gb|ACQ90306.1| auxin-repressed protein 1 [Brassica rapa subsp. pekinensis]
Length = 198
Score = 89.4 bits (220), Expect = 5e-16
Identities = 45/56 (80%), Positives = 49/56 (87%), Gaps = 5/56 (8%)
Frame = +3
Query: 123 FSVSFPLKS-----PLTIESAHKKGAGSTKNGRDSPGQRLGVKIFGDQVAKPGAII 275
F+V+ PL+ PLTIESAHKKGAGSTKNGRDSPGQRLGVKI+GDQVAKPGAII
Sbjct: 39 FTVTLPLEKLQAPVPLTIESAHKKGAGSTKNGRDSPGQRLGVKIYGDQVAKPGAII 94
>ref|XP_006284558.1| hypothetical protein CARUB_v10005779mg [Capsella rubella]
gi|482553263|gb|EOA17456.1| hypothetical protein
CARUB_v10005779mg [Capsella rubella]
Length = 198
Score = 89.0 bits (219), Expect = 6e-16
Identities = 44/56 (78%), Positives = 50/56 (89%), Gaps = 5/56 (8%)
Frame = +3
Query: 123 FSVSFPLKS-----PLTIESAHKKGAGSTKNGRDSPGQRLGVKIFGDQVAKPGAII 275
F+V+ P+++ PLTIESAHKKGAGSTKNGRDSPGQRLGVKI+GDQVAKPGAII
Sbjct: 39 FTVTLPMQNLQAPIPLTIESAHKKGAGSTKNGRDSPGQRLGVKIYGDQVAKPGAII 94
>ref|XP_004303965.1| PREDICTED: 50S ribosomal protein L27, chloroplastic-like [Fragaria
vesca subsp. vesca]
Length = 200
Score = 86.7 bits (213), Expect = 3e-15
Identities = 52/98 (53%), Positives = 60/98 (61%), Gaps = 7/98 (7%)
Frame = +3
Query: 3 MAAACVHFNLVGAFXXXXXXXXXXXXXXXXXXXX------VHVGHKFSVSFPLKS-PLTI 161
MA A + FNLVGAF + +G K S+S + PLTI
Sbjct: 1 MAVASMSFNLVGAFRGMALSSSFSTSSSSSSSFFRGDLGSLQLGPKLSLSTTQRRLPLTI 60
Query: 162 ESAHKKGAGSTKNGRDSPGQRLGVKIFGDQVAKPGAII 275
++AHKKGAGSTKNGRDS GQRLGVKI+GDQVAKPGAII
Sbjct: 61 QNAHKKGAGSTKNGRDSKGQRLGVKIYGDQVAKPGAII 98
>ref|XP_002509506.1| ribosomal protein L27, putative [Ricinus communis]
gi|223549405|gb|EEF50893.1| ribosomal protein L27,
putative [Ricinus communis]
Length = 195
Score = 86.7 bits (213), Expect = 3e-15
Identities = 44/51 (86%), Positives = 46/51 (90%), Gaps = 2/51 (3%)
Frame = +3
Query: 129 VSFPLKSP--LTIESAHKKGAGSTKNGRDSPGQRLGVKIFGDQVAKPGAII 275
VS PLK+P LTIE AHKKGAGSTKNGRDSPGQRLGVKIFG+Q AKPGAII
Sbjct: 45 VSLPLKAPFPLTIEMAHKKGAGSTKNGRDSPGQRLGVKIFGNQAAKPGAII 95