BLASTX nr result
ID: Catharanthus22_contig00018184
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00018184
(460 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002306146.2| hypothetical protein POPTR_0004s17120g [Popu... 121 1e-25
ref|XP_006412190.1| hypothetical protein EUTSA_v10026220mg [Eutr... 120 2e-25
gb|EOX97829.1| Ribosome-binding factor A family protein isoform ... 120 2e-25
gb|ESW07903.1| hypothetical protein PHAVU_009G002100g [Phaseolus... 119 3e-25
ref|XP_003527611.1| PREDICTED: probable ribosome-binding factor ... 119 3e-25
ref|XP_006487286.1| PREDICTED: probable ribosome-binding factor ... 119 4e-25
ref|XP_006423529.1| hypothetical protein CICLE_v10029227mg [Citr... 119 4e-25
ref|XP_004151338.1| PREDICTED: probable ribosome-binding factor ... 119 5e-25
ref|XP_006359612.1| PREDICTED: probable ribosome-binding factor ... 118 7e-25
gb|EPS68788.1| hypothetical protein M569_05982, partial [Genlise... 118 7e-25
ref|XP_004230968.1| PREDICTED: probable ribosome-binding factor ... 118 7e-25
gb|EXB61806.1| putative ribosome-binding factor A [Morus notabilis] 118 9e-25
ref|XP_002513014.1| Ribosome-binding factor A, putative [Ricinus... 117 1e-24
ref|XP_003631582.1| PREDICTED: probable ribosome-binding factor ... 115 6e-24
ref|XP_002270280.1| PREDICTED: probable ribosome-binding factor ... 115 6e-24
emb|CAN61115.1| hypothetical protein VITISV_035585 [Vitis vinifera] 115 6e-24
gb|EMJ02497.1| hypothetical protein PRUPE_ppa011113mg [Prunus pe... 115 8e-24
ref|XP_006284501.1| hypothetical protein CARUB_v10005701mg [Caps... 113 3e-23
ref|NP_195199.2| ribosome-binding factor A [Arabidopsis thalian... 112 7e-23
emb|CAA18852.1| putative protein [Arabidopsis thaliana] gi|72704... 112 7e-23
>ref|XP_002306146.2| hypothetical protein POPTR_0004s17120g [Populus trichocarpa]
gi|550341216|gb|EEE86657.2| hypothetical protein
POPTR_0004s17120g [Populus trichocarpa]
Length = 224
Score = 121 bits (303), Expect = 1e-25
Identities = 72/114 (63%), Positives = 80/114 (70%)
Frame = -3
Query: 344 LLHHPSTVTTCSIMNFRRLRPQISSLKSVTVLQPAVQFPGARAGIFWGRCSIKCMANPRR 165
LLH P + T NF + S+ S + P P F +IKCMANPRR
Sbjct: 8 LLHQPQPLLTYQ-SNFLPITTLYST--SFPIRSPKSTVPIHLQKPFMYGTTIKCMANPRR 64
Query: 164 VKMVAKQIRRELSDMLLTDKVLQYAILPEAALGADRYLSSLTTISDVEVSADLQ 3
VKMVAKQI+RELSDMLLTDKVLQYA+LPEAALGAD+YLSSLTTISDVEVSADLQ
Sbjct: 65 VKMVAKQIQRELSDMLLTDKVLQYAVLPEAALGADKYLSSLTTISDVEVSADLQ 118
>ref|XP_006412190.1| hypothetical protein EUTSA_v10026220mg [Eutrema salsugineum]
gi|557113360|gb|ESQ53643.1| hypothetical protein
EUTSA_v10026220mg [Eutrema salsugineum]
Length = 214
Score = 120 bits (300), Expect = 2e-25
Identities = 77/124 (62%), Positives = 86/124 (69%), Gaps = 5/124 (4%)
Frame = -3
Query: 359 MPQLLLLHHPSTVTTCSIMNFRRLRPQISSLKSVTVLQPAVQFPG--ARAGIFWG---RC 195
MP +L HH + F L P IS+++S T + QFP A A I R
Sbjct: 1 MPGVLHTHHSTF--------FFPLHPPISTVRSKT---QSFQFPQPLAPANIRTNLSVRR 49
Query: 194 SIKCMANPRRVKMVAKQIRRELSDMLLTDKVLQYAILPEAALGADRYLSSLTTISDVEVS 15
S+KCMANPRRVKMVAKQI RELSDMLLTD VLQ+A+LPEAALGADRYLSSLTTISDVEVS
Sbjct: 50 SVKCMANPRRVKMVAKQIMRELSDMLLTDTVLQHAVLPEAALGADRYLSSLTTISDVEVS 109
Query: 14 ADLQ 3
DLQ
Sbjct: 110 NDLQ 113
>gb|EOX97829.1| Ribosome-binding factor A family protein isoform 1 [Theobroma
cacao] gi|508705934|gb|EOX97830.1| Ribosome-binding
factor A family protein isoform 1 [Theobroma cacao]
Length = 212
Score = 120 bits (300), Expect = 2e-25
Identities = 61/64 (95%), Positives = 63/64 (98%)
Frame = -3
Query: 194 SIKCMANPRRVKMVAKQIRRELSDMLLTDKVLQYAILPEAALGADRYLSSLTTISDVEVS 15
+IKCMANPRRVKMVAKQIRRELSDMLLTDKVLQYA+LPEAALGADRYLSSLTTISDVEVS
Sbjct: 42 TIKCMANPRRVKMVAKQIRRELSDMLLTDKVLQYAVLPEAALGADRYLSSLTTISDVEVS 101
Query: 14 ADLQ 3
DLQ
Sbjct: 102 TDLQ 105
>gb|ESW07903.1| hypothetical protein PHAVU_009G002100g [Phaseolus vulgaris]
Length = 214
Score = 119 bits (299), Expect = 3e-25
Identities = 66/111 (59%), Positives = 79/111 (71%)
Frame = -3
Query: 335 HPSTVTTCSIMNFRRLRPQISSLKSVTVLQPAVQFPGARAGIFWGRCSIKCMANPRRVKM 156
HP+ V +C +N R +VTV ++ +A + I+CMANPRRV+M
Sbjct: 3 HPALVASCPCLNPYPWRHHFPGAGTVTVRMTPMRIVREKAVV---GSRIRCMANPRRVQM 59
Query: 155 VAKQIRRELSDMLLTDKVLQYAILPEAALGADRYLSSLTTISDVEVSADLQ 3
VAKQIRRELSDMLLTDKVLQYAILPE +LGADRYLSSLTTI+DV+VS DLQ
Sbjct: 60 VAKQIRRELSDMLLTDKVLQYAILPETSLGADRYLSSLTTITDVQVSGDLQ 110
>ref|XP_003527611.1| PREDICTED: probable ribosome-binding factor A, chloroplastic-like
[Glycine max]
Length = 255
Score = 119 bits (299), Expect = 3e-25
Identities = 67/119 (56%), Positives = 84/119 (70%), Gaps = 2/119 (1%)
Frame = -3
Query: 353 QLLLLHHPSTVTTCSIMNFRRLRPQISSLKSVTVLQPAVQFPGAR--AGIFWGRCSIKCM 180
++ +LH + + +C R ++ S + + AV P R A + G I+CM
Sbjct: 35 EIAMLHPAALIASCPYPYPYPGRHELPSASASATARVAVPMPNLRGKAVVGVGSRMIRCM 94
Query: 179 ANPRRVKMVAKQIRRELSDMLLTDKVLQYAILPEAALGADRYLSSLTTISDVEVSADLQ 3
ANPRRV+MVAKQIRRELS MLLTDKVLQYA+LPEA+LGADRYLSSLTTI+DV+VSADLQ
Sbjct: 95 ANPRRVQMVAKQIRRELSHMLLTDKVLQYAVLPEASLGADRYLSSLTTITDVQVSADLQ 153
>ref|XP_006487286.1| PREDICTED: probable ribosome-binding factor A, chloroplastic-like
isoform X1 [Citrus sinensis]
gi|568867951|ref|XP_006487287.1| PREDICTED: probable
ribosome-binding factor A, chloroplastic-like isoform X2
[Citrus sinensis]
Length = 229
Score = 119 bits (298), Expect = 4e-25
Identities = 66/93 (70%), Positives = 73/93 (78%), Gaps = 4/93 (4%)
Frame = -3
Query: 269 LKSVTVLQPAVQFPGARAGIFWGRC----SIKCMANPRRVKMVAKQIRRELSDMLLTDKV 102
L +T A P + A I R ++KCMANPRRVKMVAKQI+RELSDMLLTDKV
Sbjct: 31 LLPITSFNSATWAPKSTAAIHLRRSPTRKTVKCMANPRRVKMVAKQIQRELSDMLLTDKV 90
Query: 101 LQYAILPEAALGADRYLSSLTTISDVEVSADLQ 3
LQ+A+LPEAALGADRYLSSLTTISDVEVSADLQ
Sbjct: 91 LQFAVLPEAALGADRYLSSLTTISDVEVSADLQ 123
>ref|XP_006423529.1| hypothetical protein CICLE_v10029227mg [Citrus clementina]
gi|567861752|ref|XP_006423530.1| hypothetical protein
CICLE_v10029227mg [Citrus clementina]
gi|557525463|gb|ESR36769.1| hypothetical protein
CICLE_v10029227mg [Citrus clementina]
gi|557525464|gb|ESR36770.1| hypothetical protein
CICLE_v10029227mg [Citrus clementina]
Length = 226
Score = 119 bits (298), Expect = 4e-25
Identities = 66/93 (70%), Positives = 73/93 (78%), Gaps = 4/93 (4%)
Frame = -3
Query: 269 LKSVTVLQPAVQFPGARAGIFWGRC----SIKCMANPRRVKMVAKQIRRELSDMLLTDKV 102
L +T A P + A I R ++KCMANPRRVKMVAKQI+RELSDMLLTDKV
Sbjct: 28 LLPITSFNSATWAPKSTAAIHLRRSPTRKTVKCMANPRRVKMVAKQIQRELSDMLLTDKV 87
Query: 101 LQYAILPEAALGADRYLSSLTTISDVEVSADLQ 3
LQ+A+LPEAALGADRYLSSLTTISDVEVSADLQ
Sbjct: 88 LQFAVLPEAALGADRYLSSLTTISDVEVSADLQ 120
>ref|XP_004151338.1| PREDICTED: probable ribosome-binding factor A, chloroplastic-like
[Cucumis sativus] gi|449529960|ref|XP_004171965.1|
PREDICTED: probable ribosome-binding factor A,
chloroplastic-like [Cucumis sativus]
Length = 225
Score = 119 bits (297), Expect = 5e-25
Identities = 66/99 (66%), Positives = 77/99 (77%)
Frame = -3
Query: 299 FRRLRPQISSLKSVTVLQPAVQFPGARAGIFWGRCSIKCMANPRRVKMVAKQIRRELSDM 120
F+ RP + S SVT+L P GA +I+CMAN RR+KMVAKQI+RELSDM
Sbjct: 30 FQASRPCVYSPTSVTLLPPPPVMRGA---------TIRCMANSRRIKMVAKQIQRELSDM 80
Query: 119 LLTDKVLQYAILPEAALGADRYLSSLTTISDVEVSADLQ 3
LLTDKVLQ+AILPEA+LGAD+YLSSLTTI+DVEVSADLQ
Sbjct: 81 LLTDKVLQFAILPEASLGADKYLSSLTTITDVEVSADLQ 119
>ref|XP_006359612.1| PREDICTED: probable ribosome-binding factor A, chloroplastic-like
[Solanum tuberosum]
Length = 225
Score = 118 bits (296), Expect = 7e-25
Identities = 60/63 (95%), Positives = 62/63 (98%)
Frame = -3
Query: 191 IKCMANPRRVKMVAKQIRRELSDMLLTDKVLQYAILPEAALGADRYLSSLTTISDVEVSA 12
I+CMANPRRVKMVAKQIRRELSDMLLTDKVLQYA+LPEAALGADRYLSSLTTISDVEVS
Sbjct: 56 IRCMANPRRVKMVAKQIRRELSDMLLTDKVLQYAVLPEAALGADRYLSSLTTISDVEVST 115
Query: 11 DLQ 3
DLQ
Sbjct: 116 DLQ 118
>gb|EPS68788.1| hypothetical protein M569_05982, partial [Genlisea aurea]
Length = 64
Score = 118 bits (296), Expect = 7e-25
Identities = 60/63 (95%), Positives = 62/63 (98%)
Frame = -3
Query: 191 IKCMANPRRVKMVAKQIRRELSDMLLTDKVLQYAILPEAALGADRYLSSLTTISDVEVSA 12
I CMANPRRVKMVAKQIRRELSDMLLTDKVLQYA+LPEAALGADRYLSSLTTISDVE+SA
Sbjct: 1 IMCMANPRRVKMVAKQIRRELSDMLLTDKVLQYAVLPEAALGADRYLSSLTTISDVEISA 60
Query: 11 DLQ 3
DLQ
Sbjct: 61 DLQ 63
>ref|XP_004230968.1| PREDICTED: probable ribosome-binding factor A, chloroplastic-like
[Solanum lycopersicum]
Length = 221
Score = 118 bits (296), Expect = 7e-25
Identities = 60/63 (95%), Positives = 62/63 (98%)
Frame = -3
Query: 191 IKCMANPRRVKMVAKQIRRELSDMLLTDKVLQYAILPEAALGADRYLSSLTTISDVEVSA 12
I+CMANPRRVKMVAKQIRRELSDMLLTDKVLQYA+LPEAALGADRYLSSLTTISDVEVS
Sbjct: 56 IRCMANPRRVKMVAKQIRRELSDMLLTDKVLQYAVLPEAALGADRYLSSLTTISDVEVST 115
Query: 11 DLQ 3
DLQ
Sbjct: 116 DLQ 118
>gb|EXB61806.1| putative ribosome-binding factor A [Morus notabilis]
Length = 225
Score = 118 bits (295), Expect = 9e-25
Identities = 70/118 (59%), Positives = 81/118 (68%)
Frame = -3
Query: 356 PQLLLLHHPSTVTTCSIMNFRRLRPQISSLKSVTVLQPAVQFPGARAGIFWGRCSIKCMA 177
P L H PS+ ++ S+ + L + +L+S + PA GA I+CMA
Sbjct: 13 PSLSHRHAPSSTSSSSVSSTSSLSFRFRTLRSTARIHPASH--GA---------VIRCMA 61
Query: 176 NPRRVKMVAKQIRRELSDMLLTDKVLQYAILPEAALGADRYLSSLTTISDVEVSADLQ 3
PRRV MVAKQIRRELSDMLLTD LQYAILPEAALGADRYLSSLTTISDVEVS+DLQ
Sbjct: 62 KPRRVAMVAKQIRRELSDMLLTDTTLQYAILPEAALGADRYLSSLTTISDVEVSSDLQ 119
>ref|XP_002513014.1| Ribosome-binding factor A, putative [Ricinus communis]
gi|223548025|gb|EEF49517.1| Ribosome-binding factor A,
putative [Ricinus communis]
Length = 221
Score = 117 bits (294), Expect = 1e-24
Identities = 60/64 (93%), Positives = 63/64 (98%)
Frame = -3
Query: 194 SIKCMANPRRVKMVAKQIRRELSDMLLTDKVLQYAILPEAALGADRYLSSLTTISDVEVS 15
+IKCMANPRRVKMVAKQI+RELSDMLLTDKVLQYAILPEAALGAD+YLSSLTTISDVEVS
Sbjct: 53 TIKCMANPRRVKMVAKQIQRELSDMLLTDKVLQYAILPEAALGADKYLSSLTTISDVEVS 112
Query: 14 ADLQ 3
DLQ
Sbjct: 113 TDLQ 116
>ref|XP_003631582.1| PREDICTED: probable ribosome-binding factor A, chloroplastic
isoform 2 [Vitis vinifera]
Length = 215
Score = 115 bits (288), Expect = 6e-24
Identities = 58/64 (90%), Positives = 63/64 (98%)
Frame = -3
Query: 194 SIKCMANPRRVKMVAKQIRRELSDMLLTDKVLQYAILPEAALGADRYLSSLTTISDVEVS 15
+++CMAN RRVKMVAKQIRRELSDMLLTDKVLQ+A+LPEAALGADRYLSSLTTISDVEVS
Sbjct: 54 TVRCMANQRRVKMVAKQIRRELSDMLLTDKVLQFAVLPEAALGADRYLSSLTTISDVEVS 113
Query: 14 ADLQ 3
ADLQ
Sbjct: 114 ADLQ 117
>ref|XP_002270280.1| PREDICTED: probable ribosome-binding factor A, chloroplastic
isoform 1 [Vitis vinifera]
Length = 223
Score = 115 bits (288), Expect = 6e-24
Identities = 58/64 (90%), Positives = 63/64 (98%)
Frame = -3
Query: 194 SIKCMANPRRVKMVAKQIRRELSDMLLTDKVLQYAILPEAALGADRYLSSLTTISDVEVS 15
+++CMAN RRVKMVAKQIRRELSDMLLTDKVLQ+A+LPEAALGADRYLSSLTTISDVEVS
Sbjct: 54 TVRCMANQRRVKMVAKQIRRELSDMLLTDKVLQFAVLPEAALGADRYLSSLTTISDVEVS 113
Query: 14 ADLQ 3
ADLQ
Sbjct: 114 ADLQ 117
>emb|CAN61115.1| hypothetical protein VITISV_035585 [Vitis vinifera]
Length = 731
Score = 115 bits (288), Expect = 6e-24
Identities = 58/64 (90%), Positives = 63/64 (98%)
Frame = -3
Query: 194 SIKCMANPRRVKMVAKQIRRELSDMLLTDKVLQYAILPEAALGADRYLSSLTTISDVEVS 15
+++CMAN RRVKMVAKQIRRELSDMLLTDKVLQ+A+LPEAALGADRYLSSLTTISDVEVS
Sbjct: 337 TVRCMANQRRVKMVAKQIRRELSDMLLTDKVLQFAVLPEAALGADRYLSSLTTISDVEVS 396
Query: 14 ADLQ 3
ADLQ
Sbjct: 397 ADLQ 400
>gb|EMJ02497.1| hypothetical protein PRUPE_ppa011113mg [Prunus persica]
Length = 223
Score = 115 bits (287), Expect = 8e-24
Identities = 75/124 (60%), Positives = 84/124 (67%), Gaps = 5/124 (4%)
Frame = -3
Query: 359 MPQLLLLHHPSTVTTCSIMNFRRLRPQISSLKSVTV-LQPAVQFPGAR--AGIF-WG-RC 195
MPQ++L HHP S + P SS S + Q + + R AG+ W
Sbjct: 1 MPQVVL-HHPLLTPCLSHL------PSSSSTSSFPIRTQKSTAWIPQRNHAGLLRWHPTT 53
Query: 194 SIKCMANPRRVKMVAKQIRRELSDMLLTDKVLQYAILPEAALGADRYLSSLTTISDVEVS 15
+I+CMANPRRV MVAKQIRRELSDMLLTD VLQYAILPE ALGADRYLSSLTTISDVEVS
Sbjct: 54 TIRCMANPRRVAMVAKQIRRELSDMLLTDNVLQYAILPEVALGADRYLSSLTTISDVEVS 113
Query: 14 ADLQ 3
DLQ
Sbjct: 114 TDLQ 117
>ref|XP_006284501.1| hypothetical protein CARUB_v10005701mg [Capsella rubella]
gi|482553206|gb|EOA17399.1| hypothetical protein
CARUB_v10005701mg [Capsella rubella]
Length = 219
Score = 113 bits (282), Expect = 3e-23
Identities = 58/66 (87%), Positives = 62/66 (93%)
Frame = -3
Query: 200 RCSIKCMANPRRVKMVAKQIRRELSDMLLTDKVLQYAILPEAALGADRYLSSLTTISDVE 21
R S++CMANPRRVKMVAKQI RELSDMLLTD VLQ+A+LPEAALGADRYLSSLTTISDVE
Sbjct: 48 RRSVRCMANPRRVKMVAKQIMRELSDMLLTDTVLQHAVLPEAALGADRYLSSLTTISDVE 107
Query: 20 VSADLQ 3
VS DLQ
Sbjct: 108 VSNDLQ 113
>ref|NP_195199.2| ribosome-binding factor A [Arabidopsis thaliana]
gi|78099793|sp|O65693.2|RBFA_ARATH RecName:
Full=Probable ribosome-binding factor A, chloroplastic;
Flags: Precursor gi|25082957|gb|AAN72022.1| putative
protein [Arabidopsis thaliana]
gi|30023650|gb|AAP13358.1| At4g34730 [Arabidopsis
thaliana] gi|332661016|gb|AEE86416.1| ribosome-binding
factor A [Arabidopsis thaliana]
Length = 215
Score = 112 bits (279), Expect = 7e-23
Identities = 57/66 (86%), Positives = 62/66 (93%)
Frame = -3
Query: 200 RCSIKCMANPRRVKMVAKQIRRELSDMLLTDKVLQYAILPEAALGADRYLSSLTTISDVE 21
R +++CMANPRRVKMVAKQI RELSDMLLTD VLQ+A+LPEAALGADRYLSSLTTISDVE
Sbjct: 48 RRTVRCMANPRRVKMVAKQIMRELSDMLLTDTVLQHAVLPEAALGADRYLSSLTTISDVE 107
Query: 20 VSADLQ 3
VS DLQ
Sbjct: 108 VSNDLQ 113
>emb|CAA18852.1| putative protein [Arabidopsis thaliana] gi|7270424|emb|CAB80190.1|
putative protein [Arabidopsis thaliana]
Length = 200
Score = 112 bits (279), Expect = 7e-23
Identities = 57/66 (86%), Positives = 62/66 (93%)
Frame = -3
Query: 200 RCSIKCMANPRRVKMVAKQIRRELSDMLLTDKVLQYAILPEAALGADRYLSSLTTISDVE 21
R +++CMANPRRVKMVAKQI RELSDMLLTD VLQ+A+LPEAALGADRYLSSLTTISDVE
Sbjct: 13 RRTVRCMANPRRVKMVAKQIMRELSDMLLTDTVLQHAVLPEAALGADRYLSSLTTISDVE 72
Query: 20 VSADLQ 3
VS DLQ
Sbjct: 73 VSNDLQ 78