BLASTX nr result
ID: Catharanthus22_contig00018014
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00018014
(777 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006387289.1| hypothetical protein POPTR_1327s00200g [Popu... 62 3e-07
gb|AGH08239.1| beta-tubulin 13 [Salix arbutifolia] 61 4e-07
gb|AAD02498.1| beta tubulin 1 [Arabidopsis thaliana] 60 1e-06
gb|AFW65191.1| hypothetical protein ZEAMMB73_350137 [Zea mays] 60 1e-06
gb|EXC19132.1| Tubulin beta-1 chain [Morus notabilis] 58 4e-06
gb|EXB89975.1| Tubulin beta-1 chain [Morus notabilis] 58 4e-06
gb|EXB37197.1| Tubulin beta-1 chain [Morus notabilis] 58 4e-06
dbj|BAA82639.1| Beta-tubulin [Zinnia elegans] 58 4e-06
sp|P46264.1|TBB2_SOLTU RecName: Full=Tubulin beta-2 chain; AltNa... 58 4e-06
ref|NP_568437.1| tubulin beta-8 chain [Arabidopsis thaliana] gi|... 58 4e-06
sp|Q9ZRB2.1|TBB1_WHEAT RecName: Full=Tubulin beta-1 chain; AltNa... 58 4e-06
dbj|BAA82637.1| Beta-tubulin [Zinnia elegans] 58 4e-06
sp|P37392.1|TBB1_LUPAL RecName: Full=Tubulin beta-1 chain; AltNa... 58 4e-06
sp|Q9ZRA8.1|TBB5_WHEAT RecName: Full=Tubulin beta-5 chain; AltNa... 58 4e-06
ref|NP_001105317.1| tubulin beta-6 chain [Zea mays] gi|8928414|s... 58 4e-06
ref|NP_196786.1| beta-6 tubulin [Arabidopsis thaliana] gi|297811... 58 4e-06
ref|NP_568959.1| tubulin beta-2/beta-3 chain [Arabidopsis thalia... 58 4e-06
sp|Q8H7U1.1|TBB2_ORYSJ RecName: Full=Tubulin beta-2 chain; AltNa... 58 4e-06
sp|Q9ZPN7.1|TBB4_ELEIN RecName: Full=Tubulin beta-4 chain; AltNa... 58 4e-06
ref|NP_001044565.1| Os01g0805900 [Oryza sativa Japonica Group] g... 58 4e-06
>ref|XP_006387289.1| hypothetical protein POPTR_1327s00200g [Populus trichocarpa]
gi|550306283|gb|ERP46203.1| hypothetical protein
POPTR_1327s00200g [Populus trichocarpa]
Length = 273
Score = 61.6 bits (148), Expect = 3e-07
Identities = 28/30 (93%), Positives = 29/30 (96%), Gaps = 1/30 (3%)
Frame = +3
Query: 3 ADECMVLDNEALYDICFRTLKLTTPSC-EW 89
ADECMVLDNEALYDICFRTLKLTTPSC +W
Sbjct: 196 ADECMVLDNEALYDICFRTLKLTTPSCWDW 225
>gb|AGH08239.1| beta-tubulin 13 [Salix arbutifolia]
Length = 447
Score = 61.2 bits (147), Expect = 4e-07
Identities = 27/27 (100%), Positives = 27/27 (100%)
Frame = +3
Query: 3 ADECMVLDNEALYDICFRTLKLTTPSC 83
ADECMVLDNEALYDICFRTLKLTTPSC
Sbjct: 196 ADECMVLDNEALYDICFRTLKLTTPSC 222
>gb|AAD02498.1| beta tubulin 1 [Arabidopsis thaliana]
Length = 448
Score = 59.7 bits (143), Expect = 1e-06
Identities = 26/27 (96%), Positives = 27/27 (100%)
Frame = +3
Query: 3 ADECMVLDNEALYDICFRTLKLTTPSC 83
ADECMVLDNEALYDICFRTLKL+TPSC
Sbjct: 197 ADECMVLDNEALYDICFRTLKLSTPSC 223
>gb|AFW65191.1| hypothetical protein ZEAMMB73_350137 [Zea mays]
Length = 802
Score = 59.7 bits (143), Expect = 1e-06
Identities = 28/30 (93%), Positives = 28/30 (93%), Gaps = 1/30 (3%)
Frame = +3
Query: 3 ADECMVLDNEALYDICFRTLKLTTPS-CEW 89
ADECMVLDNEALYDICFRTLKLTTPS C W
Sbjct: 103 ADECMVLDNEALYDICFRTLKLTTPSFCFW 132
>gb|EXC19132.1| Tubulin beta-1 chain [Morus notabilis]
Length = 447
Score = 57.8 bits (138), Expect = 4e-06
Identities = 26/26 (100%), Positives = 26/26 (100%)
Frame = +3
Query: 3 ADECMVLDNEALYDICFRTLKLTTPS 80
ADECMVLDNEALYDICFRTLKLTTPS
Sbjct: 196 ADECMVLDNEALYDICFRTLKLTTPS 221
>gb|EXB89975.1| Tubulin beta-1 chain [Morus notabilis]
Length = 447
Score = 57.8 bits (138), Expect = 4e-06
Identities = 26/26 (100%), Positives = 26/26 (100%)
Frame = +3
Query: 3 ADECMVLDNEALYDICFRTLKLTTPS 80
ADECMVLDNEALYDICFRTLKLTTPS
Sbjct: 196 ADECMVLDNEALYDICFRTLKLTTPS 221
>gb|EXB37197.1| Tubulin beta-1 chain [Morus notabilis]
Length = 446
Score = 57.8 bits (138), Expect = 4e-06
Identities = 26/26 (100%), Positives = 26/26 (100%)
Frame = +3
Query: 3 ADECMVLDNEALYDICFRTLKLTTPS 80
ADECMVLDNEALYDICFRTLKLTTPS
Sbjct: 196 ADECMVLDNEALYDICFRTLKLTTPS 221
>dbj|BAA82639.1| Beta-tubulin [Zinnia elegans]
Length = 441
Score = 57.8 bits (138), Expect = 4e-06
Identities = 26/26 (100%), Positives = 26/26 (100%)
Frame = +3
Query: 3 ADECMVLDNEALYDICFRTLKLTTPS 80
ADECMVLDNEALYDICFRTLKLTTPS
Sbjct: 189 ADECMVLDNEALYDICFRTLKLTTPS 214
>sp|P46264.1|TBB2_SOLTU RecName: Full=Tubulin beta-2 chain; AltName: Full=Beta-2-tubulin
gi|609270|emb|CAA83853.1| beta-tubulin [Solanum
tuberosum]
Length = 452
Score = 57.8 bits (138), Expect = 4e-06
Identities = 26/26 (100%), Positives = 26/26 (100%)
Frame = +3
Query: 3 ADECMVLDNEALYDICFRTLKLTTPS 80
ADECMVLDNEALYDICFRTLKLTTPS
Sbjct: 199 ADECMVLDNEALYDICFRTLKLTTPS 224
>ref|NP_568437.1| tubulin beta-8 chain [Arabidopsis thaliana]
gi|334187880|ref|NP_001190373.1| tubulin beta-8 chain
[Arabidopsis thaliana]
gi|27735261|sp|P29516.2|TBB8_ARATH RecName: Full=Tubulin
beta-8 chain; AltName: Full=Beta-8-tubulin
gi|10176853|dbj|BAB10059.1| beta tubulin [Arabidopsis
thaliana] gi|332005840|gb|AED93223.1| tubulin beta-8
chain [Arabidopsis thaliana] gi|332005841|gb|AED93224.1|
tubulin beta-8 chain [Arabidopsis thaliana]
Length = 449
Score = 57.8 bits (138), Expect = 4e-06
Identities = 26/26 (100%), Positives = 26/26 (100%)
Frame = +3
Query: 3 ADECMVLDNEALYDICFRTLKLTTPS 80
ADECMVLDNEALYDICFRTLKLTTPS
Sbjct: 196 ADECMVLDNEALYDICFRTLKLTTPS 221
>sp|Q9ZRB2.1|TBB1_WHEAT RecName: Full=Tubulin beta-1 chain; AltName: Full=Beta-1-tubulin
gi|4098319|gb|AAD10487.1| beta-tubulin 1 [Triticum
aestivum]
Length = 445
Score = 57.8 bits (138), Expect = 4e-06
Identities = 26/26 (100%), Positives = 26/26 (100%)
Frame = +3
Query: 3 ADECMVLDNEALYDICFRTLKLTTPS 80
ADECMVLDNEALYDICFRTLKLTTPS
Sbjct: 196 ADECMVLDNEALYDICFRTLKLTTPS 221
>dbj|BAA82637.1| Beta-tubulin [Zinnia elegans]
Length = 448
Score = 57.8 bits (138), Expect = 4e-06
Identities = 26/26 (100%), Positives = 26/26 (100%)
Frame = +3
Query: 3 ADECMVLDNEALYDICFRTLKLTTPS 80
ADECMVLDNEALYDICFRTLKLTTPS
Sbjct: 196 ADECMVLDNEALYDICFRTLKLTTPS 221
>sp|P37392.1|TBB1_LUPAL RecName: Full=Tubulin beta-1 chain; AltName: Full=Beta-1-tubulin
gi|402636|emb|CAA49736.1| Beta tubulin 1 [Lupinus albus]
Length = 447
Score = 57.8 bits (138), Expect = 4e-06
Identities = 26/26 (100%), Positives = 26/26 (100%)
Frame = +3
Query: 3 ADECMVLDNEALYDICFRTLKLTTPS 80
ADECMVLDNEALYDICFRTLKLTTPS
Sbjct: 196 ADECMVLDNEALYDICFRTLKLTTPS 221
>sp|Q9ZRA8.1|TBB5_WHEAT RecName: Full=Tubulin beta-5 chain; AltName: Full=Beta-5-tubulin
gi|4098331|gb|AAD10492.1| beta-tubulin 5 [Triticum
aestivum] gi|146760213|emb|CAM58982.1| beta tubulin 4
[Hordeum vulgare subsp. vulgare]
gi|475627604|gb|EMT33709.1| Tubulin beta-5 chain
[Aegilops tauschii]
Length = 447
Score = 57.8 bits (138), Expect = 4e-06
Identities = 26/26 (100%), Positives = 26/26 (100%)
Frame = +3
Query: 3 ADECMVLDNEALYDICFRTLKLTTPS 80
ADECMVLDNEALYDICFRTLKLTTPS
Sbjct: 196 ADECMVLDNEALYDICFRTLKLTTPS 221
>ref|NP_001105317.1| tubulin beta-6 chain [Zea mays] gi|8928414|sp|Q41783.1|TBB6_MAIZE
RecName: Full=Tubulin beta-6 chain; AltName:
Full=Beta-6-tubulin gi|416147|gb|AAA20186.1| beta-6
tubulin [Zea mays] gi|219885629|gb|ACL53189.1| unknown
[Zea mays] gi|414880069|tpg|DAA57200.1| TPA: beta
tubulin6 isoform 1 [Zea mays]
gi|414880070|tpg|DAA57201.1| TPA: beta tubulin6 isoform
2 [Zea mays]
Length = 446
Score = 57.8 bits (138), Expect = 4e-06
Identities = 26/26 (100%), Positives = 26/26 (100%)
Frame = +3
Query: 3 ADECMVLDNEALYDICFRTLKLTTPS 80
ADECMVLDNEALYDICFRTLKLTTPS
Sbjct: 196 ADECMVLDNEALYDICFRTLKLTTPS 221
>ref|NP_196786.1| beta-6 tubulin [Arabidopsis thaliana]
gi|297811351|ref|XP_002873559.1| predicted protein
[Arabidopsis lyrata subsp. lyrata]
gi|267079|sp|P29514.1|TBB6_ARATH RecName: Full=Tubulin
beta-6 chain; AltName: Full=Beta-6-tubulin
gi|13430696|gb|AAK25970.1|AF360260_1 putative tubulin
beta-6 chain [Arabidopsis thaliana]
gi|166904|gb|AAA32884.1| beta-6 tubulin [Arabidopsis
thaliana] gi|9759392|dbj|BAB10043.1| tubulin beta-6
chain [Arabidopsis thaliana] gi|14532900|gb|AAK64132.1|
putative tubulin beta-6 chain [Arabidopsis thaliana]
gi|297319396|gb|EFH49818.1| predicted protein
[Arabidopsis lyrata subsp. lyrata]
gi|332004400|gb|AED91783.1| beta-6 tubulin [Arabidopsis
thaliana]
Length = 449
Score = 57.8 bits (138), Expect = 4e-06
Identities = 26/26 (100%), Positives = 26/26 (100%)
Frame = +3
Query: 3 ADECMVLDNEALYDICFRTLKLTTPS 80
ADECMVLDNEALYDICFRTLKLTTPS
Sbjct: 196 ADECMVLDNEALYDICFRTLKLTTPS 221
>ref|NP_568959.1| tubulin beta-2/beta-3 chain [Arabidopsis thaliana]
gi|18424622|ref|NP_568960.1| tubulin beta-2/beta-3 chain
[Arabidopsis thaliana]
gi|408407919|sp|Q56YW9.2|TBB2_ARATH RecName:
Full=Tubulin beta-2 chain
gi|408407920|sp|Q9ASR0.2|TBB3_ARATH RecName:
Full=Tubulin beta-3 chain gi|166898|gb|AAA32881.1|
beta-2 tubulin [Arabidopsis thaliana]
gi|166900|gb|AAA32882.1| beta-3 tubulin [Arabidopsis
thaliana] gi|8809665|dbj|BAA97216.1| tubulin
beta-2/beta-3 chain [Arabidopsis thaliana]
gi|10177447|dbj|BAB10838.1| tubulin beta-2/beta-3 chain
[Arabidopsis thaliana] gi|15912267|gb|AAL08267.1|
AT5g62690/MRG21_11 [Arabidopsis thaliana]
gi|16974570|gb|AAL31181.1| AT5g62700/MRG21_12
[Arabidopsis thaliana] gi|17065076|gb|AAL32692.1|
tubulin beta-2/beta-3 chain [Arabidopsis thaliana]
gi|17065332|gb|AAL32820.1| tubulin beta-2/beta-3 chain
[Arabidopsis thaliana] gi|21593444|gb|AAM65411.1|
tubulin beta-2/beta-3 chain [Arabidopsis thaliana]
gi|22136214|gb|AAM91185.1| tubulin beta-2/beta-3 chain
[Arabidopsis thaliana] gi|26449951|dbj|BAC42096.1|
putative tubulin beta-2/beta-3 chain [Arabidopsis
thaliana] gi|27311963|gb|AAO00947.1| tubulin
beta-2/beta-3 chain [Arabidopsis thaliana]
gi|332010260|gb|AED97643.1| tubulin beta-2/beta-3 chain
[Arabidopsis thaliana] gi|332010261|gb|AED97644.1|
tubulin beta-2/beta-3 chain [Arabidopsis thaliana]
Length = 450
Score = 57.8 bits (138), Expect = 4e-06
Identities = 26/26 (100%), Positives = 26/26 (100%)
Frame = +3
Query: 3 ADECMVLDNEALYDICFRTLKLTTPS 80
ADECMVLDNEALYDICFRTLKLTTPS
Sbjct: 196 ADECMVLDNEALYDICFRTLKLTTPS 221
>sp|Q8H7U1.1|TBB2_ORYSJ RecName: Full=Tubulin beta-2 chain; AltName: Full=Beta-2-tubulin
gi|24418032|gb|AAN60482.1| Putative beta tubulin [Oryza
sativa Japonica Group] gi|108705732|gb|ABF93527.1|
Tubulin beta-2 chain, putative, expressed [Oryza sativa
Japonica Group] gi|215769447|dbj|BAH01676.1| unnamed
protein product [Oryza sativa Japonica Group]
Length = 447
Score = 57.8 bits (138), Expect = 4e-06
Identities = 26/26 (100%), Positives = 26/26 (100%)
Frame = +3
Query: 3 ADECMVLDNEALYDICFRTLKLTTPS 80
ADECMVLDNEALYDICFRTLKLTTPS
Sbjct: 196 ADECMVLDNEALYDICFRTLKLTTPS 221
>sp|Q9ZPN7.1|TBB4_ELEIN RecName: Full=Tubulin beta-4 chain; AltName: Full=Beta-4-tubulin
gi|4415996|gb|AAD20181.1| beta-tubulin 4 [Eleusine
indica]
Length = 446
Score = 57.8 bits (138), Expect = 4e-06
Identities = 26/26 (100%), Positives = 26/26 (100%)
Frame = +3
Query: 3 ADECMVLDNEALYDICFRTLKLTTPS 80
ADECMVLDNEALYDICFRTLKLTTPS
Sbjct: 196 ADECMVLDNEALYDICFRTLKLTTPS 221
>ref|NP_001044565.1| Os01g0805900 [Oryza sativa Japonica Group]
gi|1174598|sp|P45960.1|TBB4_ORYSJ RecName: Full=Tubulin
beta-4 chain; AltName: Full=Beta-4-tubulin
gi|493708|dbj|BAA06381.1| beta-tubulin [Oryza sativa
Japonica Group] gi|20804582|dbj|BAB92274.1| beta-tubulin
[Oryza sativa Japonica Group]
gi|113534096|dbj|BAF06479.1| Os01g0805900 [Oryza sativa
Japonica Group] gi|215704162|dbj|BAG93002.1| unnamed
protein product [Oryza sativa Japonica Group]
Length = 447
Score = 57.8 bits (138), Expect = 4e-06
Identities = 26/26 (100%), Positives = 26/26 (100%)
Frame = +3
Query: 3 ADECMVLDNEALYDICFRTLKLTTPS 80
ADECMVLDNEALYDICFRTLKLTTPS
Sbjct: 196 ADECMVLDNEALYDICFRTLKLTTPS 221