BLASTX nr result
ID: Catharanthus22_contig00017951
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00017951
(499 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AEI98616.1| hypothetical protein 111O18.3 [Coffea canephora] 86 2e-21
ref|XP_003611964.1| DNA-directed RNA polymerase III subunit RPC5... 44 4e-09
gb|ABU45193.1| unknown [Petunia integrifolia subsp. inflata] 49 4e-09
ref|XP_004245771.1| PREDICTED: DNA-directed RNA polymerase III s... 49 5e-09
ref|XP_002310208.2| hypothetical protein POPTR_0007s12540g [Popu... 43 5e-09
gb|EMJ03134.1| hypothetical protein PRUPE_ppa002228mg [Prunus pe... 47 2e-08
emb|CBI17549.3| unnamed protein product [Vitis vinifera] 52 2e-08
ref|XP_002268044.2| PREDICTED: DNA-directed RNA polymerase III s... 52 2e-08
emb|CAN60111.1| hypothetical protein VITISV_023619 [Vitis vinifera] 52 2e-08
gb|EOX91150.1| Transcription regulators,zinc ion binding, putati... 45 3e-08
gb|EOX91148.1| SIN-like family protein, putative isoform 1 [Theo... 45 3e-08
ref|XP_002525112.1| DNA-directed RNA polymerase, putative [Ricin... 44 4e-08
ref|XP_006355441.1| PREDICTED: DNA-directed RNA polymerase III s... 44 9e-08
ref|XP_006355442.1| PREDICTED: DNA-directed RNA polymerase III s... 44 9e-08
ref|XP_006355443.1| PREDICTED: DNA-directed RNA polymerase III s... 44 9e-08
ref|XP_006355444.1| PREDICTED: DNA-directed RNA polymerase III s... 44 9e-08
ref|XP_004164787.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 44 1e-07
ref|XP_004149158.1| PREDICTED: DNA-directed RNA polymerase III s... 44 1e-07
gb|EXB77882.1| DNA-directed RNA polymerase III subunit RPC5 [Mor... 42 2e-07
gb|ABU45189.1| unknown [Capsicum frutescens] 44 3e-07
>gb|AEI98616.1| hypothetical protein 111O18.3 [Coffea canephora]
Length = 643
Score = 85.5 bits (210), Expect(2) = 2e-21
Identities = 57/113 (50%), Positives = 69/113 (61%), Gaps = 6/113 (5%)
Frame = -1
Query: 397 QPSTRPSRFAPKGSTRKPKTESKASSETVLQQSKESDSFHSTKKEELDIKPPLPLNSFAD 218
Q TRPSRFAPKGS KP+TE A++ + KKEELD KP P+NS
Sbjct: 11 QAPTRPSRFAPKGSKFKPRTEPVAATSNSI-----------AKKEELDSKPVSPINSSTT 59
Query: 217 AA--KAKDEGSAS-NTGVPMDVDAKPEEEMEELPKD---DFNENGEDKVVREL 77
AA KA+D SAS + V MDVDAK EEE E+ PKD + E GED++VRE+
Sbjct: 60 AAAGKAEDAASASVSQSVAMDVDAKVEEEAEQ-PKDEPMESREEGEDEIVREI 111
Score = 42.7 bits (99), Expect(2) = 2e-21
Identities = 18/26 (69%), Positives = 19/26 (73%)
Frame = -3
Query: 80 IDVYFNPSVGPETKLYVF*YPLRP*W 3
IDVY PS+ P TKLYV YPLRP W
Sbjct: 111 IDVYLTPSIDPNTKLYVLQYPLRPLW 136
>ref|XP_003611964.1| DNA-directed RNA polymerase III subunit RPC5 [Medicago truncatula]
gi|358344405|ref|XP_003636280.1| DNA-directed RNA
polymerase III subunit RPC5 [Medicago truncatula]
gi|355502215|gb|AES83418.1| DNA-directed RNA polymerase
III subunit RPC5 [Medicago truncatula]
gi|355513299|gb|AES94922.1| DNA-directed RNA polymerase
III subunit RPC5 [Medicago truncatula]
Length = 683
Score = 43.5 bits (101), Expect(2) = 4e-09
Identities = 37/110 (33%), Positives = 50/110 (45%), Gaps = 7/110 (6%)
Frame = -1
Query: 385 RPSRFAPKGSTRKPKTESKASSETVLQQSKESDSFHSTKKE--ELDIKPPLPLNSFADA- 215
R SRFAPK S KPK E E L E S K E E+D+ P P+ +A
Sbjct: 13 RVSRFAPKSSKFKPKKE-----EPSLVPKSEPPPLASAKTEPQEIDLTAPTPVKHEPNAS 67
Query: 214 ----AKAKDEGSASNTGVPMDVDAKPEEEMEELPKDDFNENGEDKVVREL 77
A++K EG + V +++ + E P D+ ED VVRE+
Sbjct: 68 VKTDAESKIEGKVDSRNVDVEMTEAVDGSREVNPMDE-----EDTVVREI 112
Score = 42.7 bits (99), Expect(2) = 4e-09
Identities = 18/26 (69%), Positives = 21/26 (80%)
Frame = -3
Query: 80 IDVYFNPSVGPETKLYVF*YPLRP*W 3
IDVYF+PS+ +TKLYV YPLRP W
Sbjct: 112 IDVYFSPSIDNDTKLYVMQYPLRPSW 137
>gb|ABU45193.1| unknown [Petunia integrifolia subsp. inflata]
Length = 666
Score = 48.9 bits (115), Expect(2) = 4e-09
Identities = 38/111 (34%), Positives = 57/111 (51%), Gaps = 1/111 (0%)
Frame = -1
Query: 394 PSTRPSRFAPKGSTRKPKTESKASSETVLQQSKESDSFHSTKKEELDIKPPLPLNSFADA 215
PS+R +RFAPK S KP+ + + E +D +KKEE+D KP L L + + A
Sbjct: 13 PSSRAARFAPKNSKLKPQPKPEPEPE----PEPLTDPTIPSKKEEIDSKPLLTLENGSSA 68
Query: 214 AKAKDEGSASNTGVPMDVDAKPEEEMEELPKDDFNENGEDKVVREL-MYIS 65
E + DV+ + + ME + E+GED+VVRE+ MY +
Sbjct: 69 PSIDTEKA--------DVEVQQDVAMEIV------ESGEDEVVREIDMYFT 105
Score = 37.4 bits (85), Expect(2) = 4e-09
Identities = 15/26 (57%), Positives = 19/26 (73%)
Frame = -3
Query: 80 IDVYFNPSVGPETKLYVF*YPLRP*W 3
ID+YF PS+ P T+LYV P+RP W
Sbjct: 100 IDMYFTPSLDPNTQLYVLQSPMRPVW 125
>ref|XP_004245771.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like
[Solanum lycopersicum]
Length = 669
Score = 49.3 bits (116), Expect(2) = 5e-09
Identities = 35/104 (33%), Positives = 53/104 (50%)
Frame = -1
Query: 388 TRPSRFAPKGSTRKPKTESKASSETVLQQSKESDSFHSTKKEELDIKPPLPLNSFADAAK 209
TR SRFAPK S KP+ E+K ET+ Q SDS STKKEEL +
Sbjct: 13 TRQSRFAPKSSKLKPQPETKPKIETLPQ----SDSAISTKKEELTVH------------L 56
Query: 208 AKDEGSASNTGVPMDVDAKPEEEMEELPKDDFNENGEDKVVREL 77
A++ N VP++ + + E+ ++ ++ D++VRE+
Sbjct: 57 AENRAVTGNDDVPLEGETTGNDLGED--EEQVTDSDHDEIVREI 98
Score = 36.6 bits (83), Expect(2) = 5e-09
Identities = 16/26 (61%), Positives = 18/26 (69%)
Frame = -3
Query: 80 IDVYFNPSVGPETKLYVF*YPLRP*W 3
IDV NPS P T+LYVF YPL+ W
Sbjct: 98 IDVCINPSFDPSTQLYVFQYPLKAVW 123
>ref|XP_002310208.2| hypothetical protein POPTR_0007s12540g [Populus trichocarpa]
gi|550334731|gb|EEE90658.2| hypothetical protein
POPTR_0007s12540g [Populus trichocarpa]
Length = 667
Score = 43.1 bits (100), Expect(2) = 5e-09
Identities = 36/109 (33%), Positives = 51/109 (46%), Gaps = 7/109 (6%)
Frame = -1
Query: 382 PSRFAPKGSTRKPKTESKAS---SETVLQQSKESDSFHSTKKEELDIKPPLPLNSFADAA 212
PSRFAP +PK++ K E+V K S +T + D KP + D
Sbjct: 16 PSRFAPTSKKPQPKSKPKPKPEPQESVPVGPKPDPSVSNTAE---DAKPKI------DDT 66
Query: 211 KAKDEGSASNTGVPMDVDAKPEE----EMEELPKDDFNENGEDKVVREL 77
+K E SN V M++DAK E + +L D E+ +D VVRE+
Sbjct: 67 LSKTETGVSNGNVKMEIDAKEERGAAVKENDLMDVDKEEDEDDVVVREI 115
Score = 42.7 bits (99), Expect(2) = 5e-09
Identities = 18/26 (69%), Positives = 20/26 (76%)
Frame = -3
Query: 80 IDVYFNPSVGPETKLYVF*YPLRP*W 3
IDVY+ PSV P T+LYV YPLRP W
Sbjct: 115 IDVYYTPSVDPNTQLYVMQYPLRPCW 140
>gb|EMJ03134.1| hypothetical protein PRUPE_ppa002228mg [Prunus persica]
Length = 698
Score = 46.6 bits (109), Expect(2) = 2e-08
Identities = 38/114 (33%), Positives = 61/114 (53%), Gaps = 7/114 (6%)
Frame = -1
Query: 397 QPSTRPSRFAPKGSTRKPKTESKASSETVLQQSKESDSFHSTKKEELDIKPPLPLNSFAD 218
Q + RPSRF P+ S KPK +S+ V Q+ + + +K EL KP L++
Sbjct: 11 QVAARPSRFVPRSSKAKPKPKSE---PVVKQEPPKPVTEPEPEKPELKPKPE-ELDALI- 65
Query: 217 AAKAKDEGS-------ASNTGVPMDVDAKPEEEMEELPKDDFNENGEDKVVREL 77
A K ++EG+ SN G+ M+ D +P+E+ + + +DD ED +VRE+
Sbjct: 66 AEKEEEEGTDGAPKNEDSNGGLKMETDEEPKED-DPMEEDDV----EDTIVREI 114
Score = 37.7 bits (86), Expect(2) = 2e-08
Identities = 15/26 (57%), Positives = 19/26 (73%)
Frame = -3
Query: 80 IDVYFNPSVGPETKLYVF*YPLRP*W 3
IDV+FNP + ++LYV YPLRP W
Sbjct: 114 IDVFFNPHIDDNSQLYVLQYPLRPWW 139
>emb|CBI17549.3| unnamed protein product [Vitis vinifera]
Length = 688
Score = 52.0 bits (123), Expect(2) = 2e-08
Identities = 45/111 (40%), Positives = 57/111 (51%), Gaps = 3/111 (2%)
Frame = -1
Query: 400 KQPSTRPSRFAPKGSTRKPKTESKASSETVLQQSKESDSFHSTKKEELDIKPPLPLNSFA 221
+ P RPSRFAPK S KPK K + + SK D KKEE D +PPL
Sbjct: 11 RAPVRRPSRFAPKSS--KPKLIPKPEPSSQPEPSKLDDVTLINKKEE-DSQPPL------ 61
Query: 220 DAAKAKDEGSASNTG---VPMDVDAKPEEEMEELPKDDFNENGEDKVVREL 77
K DE AS+T + M+V+AK E E + + +DD ED VVRE+
Sbjct: 62 --VKKADEPFASSTQNGVIEMEVEAKAEVE-DAMEEDD---RDEDPVVREI 106
Score = 32.0 bits (71), Expect(2) = 2e-08
Identities = 15/27 (55%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = -3
Query: 80 IDVYFNPS-VGPETKLYVF*YPLRP*W 3
IDV+F P TK+YV YPLRP W
Sbjct: 106 IDVFFTPPPTDDNTKIYVLQYPLRPYW 132
>ref|XP_002268044.2| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 [Vitis
vinifera]
Length = 672
Score = 52.0 bits (123), Expect(2) = 2e-08
Identities = 45/111 (40%), Positives = 57/111 (51%), Gaps = 3/111 (2%)
Frame = -1
Query: 400 KQPSTRPSRFAPKGSTRKPKTESKASSETVLQQSKESDSFHSTKKEELDIKPPLPLNSFA 221
+ P RPSRFAPK S KPK K + + SK D KKEE D +PPL
Sbjct: 11 RAPVRRPSRFAPKSS--KPKLIPKPEPSSQPEPSKLDDVTLINKKEE-DSQPPL------ 61
Query: 220 DAAKAKDEGSASNTG---VPMDVDAKPEEEMEELPKDDFNENGEDKVVREL 77
K DE AS+T + M+V+AK E E + + +DD ED VVRE+
Sbjct: 62 --VKKADEPFASSTQNGVIEMEVEAKAEVE-DAMEEDD---RDEDPVVREI 106
Score = 32.0 bits (71), Expect(2) = 2e-08
Identities = 15/27 (55%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = -3
Query: 80 IDVYFNPS-VGPETKLYVF*YPLRP*W 3
IDV+F P TK+YV YPLRP W
Sbjct: 106 IDVFFTPPPTDDNTKIYVLQYPLRPYW 132
>emb|CAN60111.1| hypothetical protein VITISV_023619 [Vitis vinifera]
Length = 282
Score = 52.0 bits (123), Expect(2) = 2e-08
Identities = 45/111 (40%), Positives = 57/111 (51%), Gaps = 3/111 (2%)
Frame = -1
Query: 400 KQPSTRPSRFAPKGSTRKPKTESKASSETVLQQSKESDSFHSTKKEELDIKPPLPLNSFA 221
+ P RPSRFAPK S KPK K + + SK D KKEE D +PPL
Sbjct: 11 RAPVRRPSRFAPKSS--KPKLIPKPEPSSQPEPSKLDDVTLINKKEE-DSQPPL------ 61
Query: 220 DAAKAKDEGSASNTG---VPMDVDAKPEEEMEELPKDDFNENGEDKVVREL 77
K DE AS+T + M+V+AK E E + + +DD ED VVRE+
Sbjct: 62 --VKKADEPFASSTQNGVIEMEVEAKAEVE-DAMEEDD---RDEDPVVREI 106
Score = 32.0 bits (71), Expect(2) = 2e-08
Identities = 15/27 (55%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = -3
Query: 80 IDVYFNPS-VGPETKLYVF*YPLRP*W 3
IDV+F P TK+YV YPLRP W
Sbjct: 106 IDVFFTPPPTDDNTKIYVLQYPLRPYW 132
>gb|EOX91150.1| Transcription regulators,zinc ion binding, putative isoform 3
[Theobroma cacao]
Length = 736
Score = 44.7 bits (104), Expect(2) = 3e-08
Identities = 41/123 (33%), Positives = 57/123 (46%), Gaps = 16/123 (13%)
Frame = -1
Query: 397 QPSTRPSRFAPKGSTRKP--------KTESKASSETVLQQSK--------ESDSFHSTKK 266
Q +TR ++FAPK S P K E + E + K ES S +
Sbjct: 14 QVNTRTTKFAPKSSKFAPRLKPNFKLKPEPSSKQEPLNSGPKPEPPPPPPESIS-RKKEN 72
Query: 265 EELDIKPPLPLNSFADAAKAKDEGSASNTGVPMDVDAKPEEEMEELPKDDFNENGEDKVV 86
EE DIKPP+ A+ K E S SN V M+++ EE E++ ++ N ED VV
Sbjct: 73 EEEDIKPPV-------IAETKTEQSFSNGAVKMEIE---EEAKEDVIMNEGNREEEDMVV 122
Query: 85 REL 77
RE+
Sbjct: 123 REI 125
Score = 38.9 bits (89), Expect(2) = 3e-08
Identities = 16/26 (61%), Positives = 19/26 (73%)
Frame = -3
Query: 80 IDVYFNPSVGPETKLYVF*YPLRP*W 3
IDV+F PS+ T+LYV YPLRP W
Sbjct: 125 IDVFFTPSIDANTQLYVLQYPLRPCW 150
>gb|EOX91148.1| SIN-like family protein, putative isoform 1 [Theobroma cacao]
Length = 700
Score = 44.7 bits (104), Expect(2) = 3e-08
Identities = 41/123 (33%), Positives = 57/123 (46%), Gaps = 16/123 (13%)
Frame = -1
Query: 397 QPSTRPSRFAPKGSTRKP--------KTESKASSETVLQQSK--------ESDSFHSTKK 266
Q +TR ++FAPK S P K E + E + K ES S +
Sbjct: 14 QVNTRTTKFAPKSSKFAPRLKPNFKLKPEPSSKQEPLNSGPKPEPPPPPPESIS-RKKEN 72
Query: 265 EELDIKPPLPLNSFADAAKAKDEGSASNTGVPMDVDAKPEEEMEELPKDDFNENGEDKVV 86
EE DIKPP+ A+ K E S SN V M+++ EE E++ ++ N ED VV
Sbjct: 73 EEEDIKPPV-------IAETKTEQSFSNGAVKMEIE---EEAKEDVIMNEGNREEEDMVV 122
Query: 85 REL 77
RE+
Sbjct: 123 REI 125
Score = 38.9 bits (89), Expect(2) = 3e-08
Identities = 16/26 (61%), Positives = 19/26 (73%)
Frame = -3
Query: 80 IDVYFNPSVGPETKLYVF*YPLRP*W 3
IDV+F PS+ T+LYV YPLRP W
Sbjct: 125 IDVFFTPSIDANTQLYVLQYPLRPCW 150
>ref|XP_002525112.1| DNA-directed RNA polymerase, putative [Ricinus communis]
gi|223535571|gb|EEF37239.1| DNA-directed RNA polymerase,
putative [Ricinus communis]
Length = 677
Score = 44.3 bits (103), Expect(2) = 4e-08
Identities = 36/118 (30%), Positives = 61/118 (51%), Gaps = 11/118 (9%)
Frame = -1
Query: 397 QPSTRPSRFAPKGSTRKPKTESK---------ASSETVLQQSKESD-SFHSTKKEELDIK 248
Q +RPS++APK + KP+ ++K SS + LQ+ + + S + EE +IK
Sbjct: 12 QVPSRPSKYAPKSAKFKPQPKTKPNPKPDPQLPSSNSELQEPQNAPLSKKNEDDEEEEIK 71
Query: 247 PPLPLNSFADAAKAKDEGSASNTG-VPMDVDAKPEEEMEELPKDDFNENGEDKVVREL 77
P + + K+E SN G V M++D +E+ E +++ E ED +VRE+
Sbjct: 72 PKI-------ISTPKNEAWLSNNGAVKMEIDDSMDEDKREEGENE-EEEEEDMIVREI 121
Score = 38.5 bits (88), Expect(2) = 4e-08
Identities = 16/26 (61%), Positives = 19/26 (73%)
Frame = -3
Query: 80 IDVYFNPSVGPETKLYVF*YPLRP*W 3
IDV+F PS+ T+LYV YPLRP W
Sbjct: 121 IDVFFTPSIDSATQLYVMQYPLRPCW 146
>ref|XP_006355441.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like
isoform X1 [Solanum tuberosum]
Length = 669
Score = 43.9 bits (102), Expect(2) = 9e-08
Identities = 34/104 (32%), Positives = 50/104 (48%)
Frame = -1
Query: 388 TRPSRFAPKGSTRKPKTESKASSETVLQQSKESDSFHSTKKEELDIKPPLPLNSFADAAK 209
TR SRFAPK S KP+ E+K ET+ SDS TKKEEL + +
Sbjct: 13 TRQSRFAPKSSKLKPQPETKPKIETL----PHSDSAILTKKEELSV------------SL 56
Query: 208 AKDEGSASNTGVPMDVDAKPEEEMEELPKDDFNENGEDKVVREL 77
A++ N VP++ + E+ + ++ D+VVRE+
Sbjct: 57 AENGAVTGNDDVPLEGETTGNYLGED--EGQVTDSDHDEVVREI 98
Score = 37.7 bits (86), Expect(2) = 9e-08
Identities = 17/26 (65%), Positives = 18/26 (69%)
Frame = -3
Query: 80 IDVYFNPSVGPETKLYVF*YPLRP*W 3
IDV NPS P T+LYVF YPLR W
Sbjct: 98 IDVCINPSFDPSTQLYVFQYPLRAVW 123
>ref|XP_006355442.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like
isoform X2 [Solanum tuberosum]
Length = 657
Score = 43.9 bits (102), Expect(2) = 9e-08
Identities = 34/104 (32%), Positives = 50/104 (48%)
Frame = -1
Query: 388 TRPSRFAPKGSTRKPKTESKASSETVLQQSKESDSFHSTKKEELDIKPPLPLNSFADAAK 209
TR SRFAPK S KP+ E+K ET+ SDS TKKEEL + +
Sbjct: 13 TRQSRFAPKSSKLKPQPETKPKIETL----PHSDSAILTKKEELSV------------SL 56
Query: 208 AKDEGSASNTGVPMDVDAKPEEEMEELPKDDFNENGEDKVVREL 77
A++ N VP++ + E+ + ++ D+VVRE+
Sbjct: 57 AENGAVTGNDDVPLEGETTGNYLGED--EGQVTDSDHDEVVREI 98
Score = 37.7 bits (86), Expect(2) = 9e-08
Identities = 17/26 (65%), Positives = 18/26 (69%)
Frame = -3
Query: 80 IDVYFNPSVGPETKLYVF*YPLRP*W 3
IDV NPS P T+LYVF YPLR W
Sbjct: 98 IDVCINPSFDPSTQLYVFQYPLRAVW 123
>ref|XP_006355443.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like
isoform X3 [Solanum tuberosum]
Length = 577
Score = 43.9 bits (102), Expect(2) = 9e-08
Identities = 34/104 (32%), Positives = 50/104 (48%)
Frame = -1
Query: 388 TRPSRFAPKGSTRKPKTESKASSETVLQQSKESDSFHSTKKEELDIKPPLPLNSFADAAK 209
TR SRFAPK S KP+ E+K ET+ SDS TKKEEL + +
Sbjct: 13 TRQSRFAPKSSKLKPQPETKPKIETL----PHSDSAILTKKEELSV------------SL 56
Query: 208 AKDEGSASNTGVPMDVDAKPEEEMEELPKDDFNENGEDKVVREL 77
A++ N VP++ + E+ + ++ D+VVRE+
Sbjct: 57 AENGAVTGNDDVPLEGETTGNYLGED--EGQVTDSDHDEVVREI 98
Score = 37.7 bits (86), Expect(2) = 9e-08
Identities = 17/26 (65%), Positives = 18/26 (69%)
Frame = -3
Query: 80 IDVYFNPSVGPETKLYVF*YPLRP*W 3
IDV NPS P T+LYVF YPLR W
Sbjct: 98 IDVCINPSFDPSTQLYVFQYPLRAVW 123
>ref|XP_006355444.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like
isoform X4 [Solanum tuberosum]
Length = 536
Score = 43.9 bits (102), Expect(2) = 9e-08
Identities = 34/104 (32%), Positives = 50/104 (48%)
Frame = -1
Query: 388 TRPSRFAPKGSTRKPKTESKASSETVLQQSKESDSFHSTKKEELDIKPPLPLNSFADAAK 209
TR SRFAPK S KP+ E+K ET+ SDS TKKEEL + +
Sbjct: 13 TRQSRFAPKSSKLKPQPETKPKIETL----PHSDSAILTKKEELSV------------SL 56
Query: 208 AKDEGSASNTGVPMDVDAKPEEEMEELPKDDFNENGEDKVVREL 77
A++ N VP++ + E+ + ++ D+VVRE+
Sbjct: 57 AENGAVTGNDDVPLEGETTGNYLGED--EGQVTDSDHDEVVREI 98
Score = 37.7 bits (86), Expect(2) = 9e-08
Identities = 17/26 (65%), Positives = 18/26 (69%)
Frame = -3
Query: 80 IDVYFNPSVGPETKLYVF*YPLRP*W 3
IDV NPS P T+LYVF YPLR W
Sbjct: 98 IDVCINPSFDPSTQLYVFQYPLRAVW 123
>ref|XP_004164787.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase III
subunit RPC5-like [Cucumis sativus]
Length = 702
Score = 43.5 bits (101), Expect(2) = 1e-07
Identities = 44/127 (34%), Positives = 56/127 (44%), Gaps = 20/127 (15%)
Frame = -1
Query: 397 QPSTRPSRFAPKGSTRKPKTESKASSETVLQQ-----------SK----ESDSFHSTKK- 266
Q +R SRFAPK S KPK +S+ + QQ SK E D+ KK
Sbjct: 11 QVPSRTSRFAPKSSKFKPKPKSEVVPKPEPQQPLTKLEPQPPISKPEVVEPDARVEEKKE 70
Query: 265 --EELDIKPPLPLNSFADAAKAKDEGSASNTGVPMDVDAKPEEEMEELPKDDFNEN--GE 98
EE+++KP K E S N MDV+ K E E + + DD E E
Sbjct: 71 DGEEVEVKP-------------KVESSLPNGVAKMDVETKSEVEEDAMVDDDPIEEDASE 117
Query: 97 DKVVREL 77
D VVRE+
Sbjct: 118 DMVVREI 124
Score = 37.7 bits (86), Expect(2) = 1e-07
Identities = 17/26 (65%), Positives = 18/26 (69%)
Frame = -3
Query: 80 IDVYFNPSVGPETKLYVF*YPLRP*W 3
IDV F PSV +KLYV YPLRP W
Sbjct: 124 IDVLFTPSVDSNSKLYVLQYPLRPRW 149
>ref|XP_004149158.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like
[Cucumis sativus]
Length = 702
Score = 43.5 bits (101), Expect(2) = 1e-07
Identities = 44/127 (34%), Positives = 56/127 (44%), Gaps = 20/127 (15%)
Frame = -1
Query: 397 QPSTRPSRFAPKGSTRKPKTESKASSETVLQQ-----------SK----ESDSFHSTKK- 266
Q +R SRFAPK S KPK +S+ + QQ SK E D+ KK
Sbjct: 11 QVPSRTSRFAPKSSKFKPKPKSEVVPKPEPQQPLTKLEPQPPISKPEVVEPDARVEEKKE 70
Query: 265 --EELDIKPPLPLNSFADAAKAKDEGSASNTGVPMDVDAKPEEEMEELPKDDFNEN--GE 98
EE+++KP K E S N MDV+ K E E + + DD E E
Sbjct: 71 DGEEVEVKP-------------KVESSLPNGVAKMDVETKSEVEEDAMVDDDPIEEDASE 117
Query: 97 DKVVREL 77
D VVRE+
Sbjct: 118 DMVVREI 124
Score = 37.7 bits (86), Expect(2) = 1e-07
Identities = 17/26 (65%), Positives = 18/26 (69%)
Frame = -3
Query: 80 IDVYFNPSVGPETKLYVF*YPLRP*W 3
IDV F PSV +KLYV YPLRP W
Sbjct: 124 IDVLFTPSVDSNSKLYVLQYPLRPRW 149
>gb|EXB77882.1| DNA-directed RNA polymerase III subunit RPC5 [Morus notabilis]
Length = 732
Score = 42.0 bits (97), Expect(2) = 2e-07
Identities = 35/108 (32%), Positives = 58/108 (53%), Gaps = 18/108 (16%)
Frame = -1
Query: 397 QPSTRPSRFAPKGSTRKPKTESKASSE-----TVLQQSK--------ESDSFHSTKKEEL 257
Q +R SRFAPK S KPK++S+ +S +VL +++ E F + K++E+
Sbjct: 11 QVPSRVSRFAPKFSKLKPKSKSELASAQESLGSVLPKTETGQTAPKPEPQEFEAKKEKEI 70
Query: 256 DIKPPLPLNSFA-----DAAKAKDEGSASNTGVPMDVDAKPEEEMEEL 128
D KP P N F AA AK+E +++ M+V+A+ + + E+
Sbjct: 71 DAKPK-PENGFVKMEVDSAAGAKEEPEENDS---MEVEAEEDMVVREI 114
Score = 38.9 bits (89), Expect(2) = 2e-07
Identities = 16/26 (61%), Positives = 19/26 (73%)
Frame = -3
Query: 80 IDVYFNPSVGPETKLYVF*YPLRP*W 3
IDV+FNP + T+LYV YPLRP W
Sbjct: 114 IDVFFNPKIDEGTQLYVLQYPLRPSW 139
>gb|ABU45189.1| unknown [Capsicum frutescens]
Length = 629
Score = 43.9 bits (102), Expect(2) = 3e-07
Identities = 35/114 (30%), Positives = 56/114 (49%), Gaps = 10/114 (8%)
Frame = -1
Query: 388 TRPSRFAPKGSTRKPKTESKASSETVLQQSKESDSFHSTKKEELDIKPPLPLNSFAD-AA 212
TR SRFAPK S KP+ +++ T S KKEEL+ + PL + + AA
Sbjct: 13 TRQSRFAPKNSKLKPQPKTETLPPT-----------DSAKKEELNSQLPLTDHITENGAA 61
Query: 211 KAKDEGSAS---------NTGVPMDVDAKPEEEMEELPKDDFNENGEDKVVREL 77
K K++ A+ P+D + ++ +EE + + N +D+VVRE+
Sbjct: 62 KVKEDNVATVKEDNVAIFKDDAPLDGETTGDDLVEEQFMTEGDSNDDDEVVREI 115
Score = 35.8 bits (81), Expect(2) = 3e-07
Identities = 15/26 (57%), Positives = 18/26 (69%)
Frame = -3
Query: 80 IDVYFNPSVGPETKLYVF*YPLRP*W 3
IDV++ PS P +KLY F YPLR W
Sbjct: 115 IDVWYTPSFDPVSKLYAFQYPLRAVW 140