BLASTX nr result
ID: Catharanthus22_contig00017929
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00017929
(326 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOX96488.1| Ras 5 [Theobroma cacao] 65 9e-09
gb|ELR57927.1| Ras-related protein Rab-1A, partial [Bos mutus] 65 9e-09
dbj|BAC98287.1| mKIAA3012 protein [Mus musculus] 65 9e-09
gb|EAW99923.1| RAB1A, member RAS oncogene family, isoform CRA_f ... 65 9e-09
pdb|3TKL|A Chain A, Crystal Structure Of The Gtp-Bound Rab1a In ... 64 2e-08
pdb|3SFV|A Chain A, Crystal Structure Of The Gdp-Bound Rab1a S25... 63 4e-08
gb|EXC02066.1| Ras-related protein RABD2c [Morus notabilis] 63 5e-08
ref|XP_006911133.1| PREDICTED: ras-related protein Rab-1B [Ptero... 63 5e-08
ref|XP_006860957.1| PREDICTED: ras-related protein Rab-1B isofor... 63 5e-08
ref|XP_006893362.1| PREDICTED: ras-related protein Rab-1B isofor... 63 5e-08
ref|XP_006893361.1| PREDICTED: ras-related protein Rab-1B isofor... 63 5e-08
ref|XP_006771625.1| PREDICTED: ras-related protein Rab-1B [Myoti... 63 5e-08
ref|NP_001265926.1| ras-related protein RABD2c-like [Cicer ariet... 63 5e-08
sp|P10536.1|RAB1B_RAT RecName: Full=Ras-related protein Rab-1B g... 63 5e-08
dbj|BAA02117.1| GTP-binding protein [Pisum sativum] gi|738941|pr... 63 5e-08
gb|AAB28535.1| ras-related GTP binding protein possessing GTPase... 63 5e-08
prf||1515250A rab1B protein 63 5e-08
sp|P22125.1|RAB1_DISOM RecName: Full=Ras-related protein ORAB-1 ... 63 5e-08
ref|XP_002906462.1| Rab1 family GTPase (PiYpt1) [Phytophthora in... 63 5e-08
ref|NP_001047606.2| Os02g0653800 [Oryza sativa Japonica Group] g... 63 5e-08
>gb|EOX96488.1| Ras 5 [Theobroma cacao]
Length = 295
Score = 65.1 bits (157), Expect = 9e-09
Identities = 34/43 (79%), Positives = 34/43 (79%), Gaps = 6/43 (13%)
Frame = +2
Query: 215 GDLARRFP------MNPEYDYLFKLLLIGDSGVGKSCLLLRFA 325
GDL R P MNPEYDYLFKLLLIGDSGVGKSCLLLRFA
Sbjct: 79 GDLILRSPFYLLVTMNPEYDYLFKLLLIGDSGVGKSCLLLRFA 121
>gb|ELR57927.1| Ras-related protein Rab-1A, partial [Bos mutus]
Length = 246
Score = 65.1 bits (157), Expect = 9e-09
Identities = 31/38 (81%), Positives = 32/38 (84%)
Frame = +2
Query: 212 GGDLARRFPMNPEYDYLFKLLLIGDSGVGKSCLLLRFA 325
GG + MNPEYDYLFKLLLIGDSGVGKSCLLLRFA
Sbjct: 36 GGSCSDMSSMNPEYDYLFKLLLIGDSGVGKSCLLLRFA 73
>dbj|BAC98287.1| mKIAA3012 protein [Mus musculus]
Length = 253
Score = 65.1 bits (157), Expect = 9e-09
Identities = 31/38 (81%), Positives = 32/38 (84%)
Frame = +2
Query: 212 GGDLARRFPMNPEYDYLFKLLLIGDSGVGKSCLLLRFA 325
GG + MNPEYDYLFKLLLIGDSGVGKSCLLLRFA
Sbjct: 43 GGSCSDMSSMNPEYDYLFKLLLIGDSGVGKSCLLLRFA 80
>gb|EAW99923.1| RAB1A, member RAS oncogene family, isoform CRA_f [Homo sapiens]
Length = 257
Score = 65.1 bits (157), Expect = 9e-09
Identities = 31/38 (81%), Positives = 32/38 (84%)
Frame = +2
Query: 212 GGDLARRFPMNPEYDYLFKLLLIGDSGVGKSCLLLRFA 325
GG + MNPEYDYLFKLLLIGDSGVGKSCLLLRFA
Sbjct: 47 GGSCSDMSSMNPEYDYLFKLLLIGDSGVGKSCLLLRFA 84
>pdb|3TKL|A Chain A, Crystal Structure Of The Gtp-Bound Rab1a In Complex With
The Coiled- Coil Domain Of Lida From Legionella
Pneumophila
Length = 196
Score = 64.3 bits (155), Expect = 2e-08
Identities = 31/37 (83%), Positives = 31/37 (83%)
Frame = +2
Query: 215 GDLARRFPMNPEYDYLFKLLLIGDSGVGKSCLLLRFA 325
G L MNPEYDYLFKLLLIGDSGVGKSCLLLRFA
Sbjct: 1 GPLGSMSSMNPEYDYLFKLLLIGDSGVGKSCLLLRFA 37
>pdb|3SFV|A Chain A, Crystal Structure Of The Gdp-Bound Rab1a S25n Mutant In
Complex With The Coiled-Coil Domain Of Lida From
Legionella Pneumophila
Length = 181
Score = 63.2 bits (152), Expect = 4e-08
Identities = 30/37 (81%), Positives = 31/37 (83%)
Frame = +2
Query: 215 GDLARRFPMNPEYDYLFKLLLIGDSGVGKSCLLLRFA 325
G L MNPEYDYLFKLLLIGDSGVGK+CLLLRFA
Sbjct: 1 GPLGSMSSMNPEYDYLFKLLLIGDSGVGKNCLLLRFA 37
>gb|EXC02066.1| Ras-related protein RABD2c [Morus notabilis]
Length = 202
Score = 62.8 bits (151), Expect = 5e-08
Identities = 29/29 (100%), Positives = 29/29 (100%)
Frame = +2
Query: 239 MNPEYDYLFKLLLIGDSGVGKSCLLLRFA 325
MNPEYDYLFKLLLIGDSGVGKSCLLLRFA
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFA 29
>ref|XP_006911133.1| PREDICTED: ras-related protein Rab-1B [Pteropus alecto]
Length = 201
Score = 62.8 bits (151), Expect = 5e-08
Identities = 29/29 (100%), Positives = 29/29 (100%)
Frame = +2
Query: 239 MNPEYDYLFKLLLIGDSGVGKSCLLLRFA 325
MNPEYDYLFKLLLIGDSGVGKSCLLLRFA
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFA 29
>ref|XP_006860957.1| PREDICTED: ras-related protein Rab-1B isoform X1 [Chrysochloris
asiatica]
Length = 201
Score = 62.8 bits (151), Expect = 5e-08
Identities = 29/29 (100%), Positives = 29/29 (100%)
Frame = +2
Query: 239 MNPEYDYLFKLLLIGDSGVGKSCLLLRFA 325
MNPEYDYLFKLLLIGDSGVGKSCLLLRFA
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFA 29
>ref|XP_006893362.1| PREDICTED: ras-related protein Rab-1B isoform X2 [Elephantulus
edwardii]
Length = 125
Score = 62.8 bits (151), Expect = 5e-08
Identities = 29/29 (100%), Positives = 29/29 (100%)
Frame = +2
Query: 239 MNPEYDYLFKLLLIGDSGVGKSCLLLRFA 325
MNPEYDYLFKLLLIGDSGVGKSCLLLRFA
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFA 29
>ref|XP_006893361.1| PREDICTED: ras-related protein Rab-1B isoform X1 [Elephantulus
edwardii]
Length = 201
Score = 62.8 bits (151), Expect = 5e-08
Identities = 29/29 (100%), Positives = 29/29 (100%)
Frame = +2
Query: 239 MNPEYDYLFKLLLIGDSGVGKSCLLLRFA 325
MNPEYDYLFKLLLIGDSGVGKSCLLLRFA
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFA 29
>ref|XP_006771625.1| PREDICTED: ras-related protein Rab-1B [Myotis davidii]
Length = 239
Score = 62.8 bits (151), Expect = 5e-08
Identities = 29/29 (100%), Positives = 29/29 (100%)
Frame = +2
Query: 239 MNPEYDYLFKLLLIGDSGVGKSCLLLRFA 325
MNPEYDYLFKLLLIGDSGVGKSCLLLRFA
Sbjct: 39 MNPEYDYLFKLLLIGDSGVGKSCLLLRFA 67
>ref|NP_001265926.1| ras-related protein RABD2c-like [Cicer arietinum]
gi|4586580|dbj|BAA76422.1| rab-type small GTP-binding
protein [Cicer arietinum]
Length = 202
Score = 62.8 bits (151), Expect = 5e-08
Identities = 29/29 (100%), Positives = 29/29 (100%)
Frame = +2
Query: 239 MNPEYDYLFKLLLIGDSGVGKSCLLLRFA 325
MNPEYDYLFKLLLIGDSGVGKSCLLLRFA
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFA 29
>sp|P10536.1|RAB1B_RAT RecName: Full=Ras-related protein Rab-1B gi|57006|emb|CAA32105.1|
unnamed protein product [Rattus sp.]
Length = 201
Score = 62.8 bits (151), Expect = 5e-08
Identities = 29/29 (100%), Positives = 29/29 (100%)
Frame = +2
Query: 239 MNPEYDYLFKLLLIGDSGVGKSCLLLRFA 325
MNPEYDYLFKLLLIGDSGVGKSCLLLRFA
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFA 29
>dbj|BAA02117.1| GTP-binding protein [Pisum sativum] gi|738941|prf||2001457J
GTP-binding protein
Length = 203
Score = 62.8 bits (151), Expect = 5e-08
Identities = 29/29 (100%), Positives = 29/29 (100%)
Frame = +2
Query: 239 MNPEYDYLFKLLLIGDSGVGKSCLLLRFA 325
MNPEYDYLFKLLLIGDSGVGKSCLLLRFA
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFA 29
>gb|AAB28535.1| ras-related GTP binding protein possessing GTPase activity [Oryza
sativa]
Length = 202
Score = 62.8 bits (151), Expect = 5e-08
Identities = 29/29 (100%), Positives = 29/29 (100%)
Frame = +2
Query: 239 MNPEYDYLFKLLLIGDSGVGKSCLLLRFA 325
MNPEYDYLFKLLLIGDSGVGKSCLLLRFA
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFA 29
>prf||1515250A rab1B protein
Length = 201
Score = 62.8 bits (151), Expect = 5e-08
Identities = 29/29 (100%), Positives = 29/29 (100%)
Frame = +2
Query: 239 MNPEYDYLFKLLLIGDSGVGKSCLLLRFA 325
MNPEYDYLFKLLLIGDSGVGKSCLLLRFA
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFA 29
>sp|P22125.1|RAB1_DISOM RecName: Full=Ras-related protein ORAB-1 gi|213123|gb|AAA49234.1|
GTP-binding protein [Discopyge ommata]
Length = 202
Score = 62.8 bits (151), Expect = 5e-08
Identities = 29/29 (100%), Positives = 29/29 (100%)
Frame = +2
Query: 239 MNPEYDYLFKLLLIGDSGVGKSCLLLRFA 325
MNPEYDYLFKLLLIGDSGVGKSCLLLRFA
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFA 29
>ref|XP_002906462.1| Rab1 family GTPase (PiYpt1) [Phytophthora infestans T30-4]
gi|2500076|sp|Q01890.1|YPT1_PHYIN RecName: Full=Ras-like
GTP-binding protein YPT1 gi|940432|gb|AAB40355.1| ras
related protein PiYpt1 [Phytophthora infestans]
gi|262107811|gb|EEY65863.1| Rab1 family GTPase (PiYpt1)
[Phytophthora infestans T30-4]
gi|348688420|gb|EGZ28234.1| hypothetical protein
PHYSODRAFT_309136 [Phytophthora sojae]
gi|566017605|gb|ETI40516.1| Ras-like GTP-binding protein
YPT1 [Phytophthora parasitica P1569]
gi|566017606|gb|ETI40517.1| Ras-like GTP-binding protein
YPT1, variant [Phytophthora parasitica P1569]
gi|567954984|gb|ETK80617.1| Ras-like GTP-binding protein
YPT1 [Phytophthora parasitica]
gi|567954985|gb|ETK80618.1| Ras-like GTP-binding protein
YPT1, variant [Phytophthora parasitica]
gi|567983653|gb|ETL34040.1| Ras-like GTP-binding protein
YPT1 [Phytophthora parasitica]
gi|567983654|gb|ETL34041.1| Ras-like GTP-binding protein
YPT1, variant [Phytophthora parasitica]
gi|568013139|gb|ETL87316.1| Ras-like GTP-binding protein
YPT1 [Phytophthora parasitica]
gi|568013140|gb|ETL87317.1| Ras-like GTP-binding protein
YPT1, variant [Phytophthora parasitica]
gi|568043247|gb|ETM40542.1| Ras-like GTP-binding protein
YPT1 [Phytophthora parasitica]
gi|568043248|gb|ETM40543.1| Ras-like GTP-binding protein
YPT1, variant [Phytophthora parasitica]
gi|568090340|gb|ETN05175.1| Ras-like GTP-binding protein
YPT1 [Phytophthora parasitica INRA-310]
gi|568090341|gb|ETN05176.1| Ras-like GTP-binding protein
YPT1, variant [Phytophthora parasitica INRA-310]
gi|570321301|gb|ETO69249.1| Ras-like GTP-binding protein
YPT1 [Phytophthora parasitica P1976]
gi|570321302|gb|ETO69250.1| Ras-like GTP-binding protein
YPT1, variant [Phytophthora parasitica P1976]
gi|570945035|gb|ETP10292.1| Ras-like GTP-binding protein
YPT1 [Phytophthora parasitica CJ01A1]
gi|570945036|gb|ETP10293.1| Ras-like GTP-binding protein
YPT1, variant [Phytophthora parasitica CJ01A1]
gi|570976666|gb|ETP38434.1| Ras-like GTP-binding protein
YPT1 [Phytophthora parasitica P10297]
gi|570976667|gb|ETP38435.1| Ras-like GTP-binding protein
YPT1, variant [Phytophthora parasitica P10297]
Length = 201
Score = 62.8 bits (151), Expect = 5e-08
Identities = 29/29 (100%), Positives = 29/29 (100%)
Frame = +2
Query: 239 MNPEYDYLFKLLLIGDSGVGKSCLLLRFA 325
MNPEYDYLFKLLLIGDSGVGKSCLLLRFA
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFA 29
>ref|NP_001047606.2| Os02g0653800 [Oryza sativa Japonica Group]
gi|14140133|emb|CAC39050.1| putative GTP-binding protein
[Oryza sativa] gi|49387522|dbj|BAD24987.1| putative
GTP-binding protein YPTM2 [Oryza sativa Japonica Group]
gi|215769313|dbj|BAH01542.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|222623360|gb|EEE57492.1| hypothetical protein
OsJ_07768 [Oryza sativa Japonica Group]
gi|255671140|dbj|BAF09520.2| Os02g0653800 [Oryza sativa
Japonica Group]
Length = 203
Score = 62.8 bits (151), Expect = 5e-08
Identities = 29/29 (100%), Positives = 29/29 (100%)
Frame = +2
Query: 239 MNPEYDYLFKLLLIGDSGVGKSCLLLRFA 325
MNPEYDYLFKLLLIGDSGVGKSCLLLRFA
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFA 29