BLASTX nr result

ID: Catharanthus22_contig00017906 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00017906
         (445 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004236125.1| PREDICTED: RING-H2 finger protein ATL46-like...    71   2e-10
ref|XP_006345034.1| PREDICTED: RING-H2 finger protein ATL46-like...    70   3e-10
ref|XP_002318032.2| hypothetical protein POPTR_0012s07960g [Popu...    66   5e-09
gb|EMJ16759.1| hypothetical protein PRUPE_ppa007393mg [Prunus pe...    61   1e-07
ref|XP_004304601.1| PREDICTED: RING-H2 finger protein ATL46-like...    60   3e-07
ref|XP_006476747.1| PREDICTED: RING-H2 finger protein ATL46-like...    58   1e-06
gb|EOY02338.1| RING/U-box superfamily protein isoform 1 [Theobro...    58   1e-06
ref|XP_006439777.1| hypothetical protein CICLE_v10024093mg [Citr...    56   6e-06

>ref|XP_004236125.1| PREDICTED: RING-H2 finger protein ATL46-like [Solanum lycopersicum]
          Length = 312

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 37/83 (44%), Positives = 53/83 (63%)
 Frame = -3

Query: 440 SELQLALPNANMKGANFASHNNTTEKDGKKISAKTRGESYSVSKIWLWSKKDTATTTSSL 261
           SELQ+ALPN  +  A   + N     +GKKISA+T+GES+SVSKIWLWSKK   + +S  
Sbjct: 233 SELQIALPNVKILKAKCENTNFGANAEGKKISARTKGESFSVSKIWLWSKKGKFSNSSET 292

Query: 260 DTNNNVTSSLNVGRPILGTTQLV 192
           + +     S+N+  P++ T Q +
Sbjct: 293 NIDG---PSVNIDIPMIKTAQFM 312


>ref|XP_006345034.1| PREDICTED: RING-H2 finger protein ATL46-like [Solanum tuberosum]
          Length = 312

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 38/83 (45%), Positives = 52/83 (62%)
 Frame = -3

Query: 440 SELQLALPNANMKGANFASHNNTTEKDGKKISAKTRGESYSVSKIWLWSKKDTATTTSSL 261
           SELQ+ALPN  +  A   +       +GKKISA+T+GES+SVSKIWLWSKK   + +S +
Sbjct: 233 SELQIALPNVKILKAKCENTIFGANAEGKKISARTKGESFSVSKIWLWSKKGKFSNSSEI 292

Query: 260 DTNNNVTSSLNVGRPILGTTQLV 192
           +       S+N+  P+  TTQ V
Sbjct: 293 NIGG---PSVNIDIPMTKTTQFV 312


>ref|XP_002318032.2| hypothetical protein POPTR_0012s07960g [Populus trichocarpa]
           gi|550326627|gb|EEE96252.2| hypothetical protein
           POPTR_0012s07960g [Populus trichocarpa]
          Length = 350

 Score = 65.9 bits (159), Expect = 5e-09
 Identities = 37/82 (45%), Positives = 52/82 (63%), Gaps = 2/82 (2%)
 Frame = -3

Query: 440 SELQLALPNANMKGANFASHNNTTEKD--GKKISAKTRGESYSVSKIWLWSKKDTATTTS 267
           S LQ+AL   N+ G    +   +T+ D   KKI  +TRG+S+SVSKIWLWSKK    T+S
Sbjct: 262 SNLQVALSQGNLNGRGGDNGCPSTDGDLEDKKIRGRTRGDSFSVSKIWLWSKKSRFPTSS 321

Query: 266 SLDTNNNVTSSLNVGRPILGTT 201
           S+  + + +SS+ VG PI  T+
Sbjct: 322 SIHMDMSSSSSVAVGLPINDTS 343


>gb|EMJ16759.1| hypothetical protein PRUPE_ppa007393mg [Prunus persica]
          Length = 369

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 31/55 (56%), Positives = 40/55 (72%)
 Frame = -3

Query: 371 TEKDGKKISAKTRGESYSVSKIWLWSKKDTATTTSSLDTNNNVTSSLNVGRPILG 207
           ++ +GKKIS+ T+GESYSVSKIWLWSKK     +SS+DT   + SSLN   P +G
Sbjct: 312 SDVEGKKISSVTKGESYSVSKIWLWSKK--GKFSSSIDTQMGMPSSLNTDLPWMG 364


>ref|XP_004304601.1| PREDICTED: RING-H2 finger protein ATL46-like [Fragaria vesca subsp.
           vesca]
          Length = 368

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 40/89 (44%), Positives = 53/89 (59%), Gaps = 8/89 (8%)
 Frame = -3

Query: 440 SELQLALPNANMKGANFA------SHNNTTEKD--GKKISAKTRGESYSVSKIWLWSKKD 285
           SEL++AL + + +G N        S N + + D   KKI + TRGESYSVSKIWLWSKK 
Sbjct: 278 SELRVAL-SKDQQGRNIKLTKEEHSGNPSIDSDVEAKKIGSVTRGESYSVSKIWLWSKK- 335

Query: 284 TATTTSSLDTNNNVTSSLNVGRPILGTTQ 198
               +SS+DT   + SSLN   P +  T+
Sbjct: 336 -GKYSSSIDTQTGMPSSLNTDLPWMRRTE 363


>ref|XP_006476747.1| PREDICTED: RING-H2 finger protein ATL46-like [Citrus sinensis]
          Length = 364

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 32/60 (53%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
 Frame = -3

Query: 440 SELQLALPN-ANMKGANFASHNNTTEKDGKKISAKTRGESYSVSKIWLWSKKDTATTTSS 264
           S+LQ+AL N     G   ++     E +GKKIS +TRGESYSVSKIWLWSKK    ++SS
Sbjct: 283 SDLQVALSNHIACDGTGSSNSLVDGELEGKKISERTRGESYSVSKIWLWSKKSRLPSSSS 342


>gb|EOY02338.1| RING/U-box superfamily protein isoform 1 [Theobroma cacao]
           gi|508710442|gb|EOY02339.1| RING/U-box superfamily
           protein isoform 1 [Theobroma cacao]
          Length = 400

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 38/90 (42%), Positives = 51/90 (56%), Gaps = 9/90 (10%)
 Frame = -3

Query: 440 SELQLALPNANMKGANFA-------SHNNTTEKDG--KKISAKTRGESYSVSKIWLWSKK 288
           S+L++AL N    G +         + N++ E+D   KKIS+  +GES+SVSKIWLWSKK
Sbjct: 311 SDLRVALSNDRSSGCDVKLSKGLEQNGNSSVERDAEAKKISSVAKGESFSVSKIWLWSKK 370

Query: 287 DTATTTSSLDTNNNVTSSLNVGRPILGTTQ 198
                +SS D    + SSLN   P L  TQ
Sbjct: 371 --GKFSSSSDAQIGMPSSLNTDLPWLEKTQ 398


>ref|XP_006439777.1| hypothetical protein CICLE_v10024093mg [Citrus clementina]
           gi|557542039|gb|ESR53017.1| hypothetical protein
           CICLE_v10024093mg [Citrus clementina]
          Length = 751

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 31/60 (51%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
 Frame = -3

Query: 440 SELQLALPN-ANMKGANFASHNNTTEKDGKKISAKTRGESYSVSKIWLWSKKDTATTTSS 264
           S+LQ+AL N     G   ++     E +GKKIS +TRGESYSVSKIWLW KK    ++SS
Sbjct: 670 SDLQVALSNHIACDGTGSSNSLVDGELEGKKISERTRGESYSVSKIWLWPKKSRLPSSSS 729


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