BLASTX nr result
ID: Catharanthus22_contig00017862
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00017862
(1276 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN74369.1| hypothetical protein VITISV_037867 [Vitis vinifera] 72 9e-13
gb|EXC28058.1| General transcription factor IIE subunit 1 [Morus... 76 3e-11
ref|XP_002331723.1| predicted protein [Populus trichocarpa] gi|5... 74 1e-10
ref|XP_003633196.1| PREDICTED: general transcription factor IIE ... 73 2e-10
ref|XP_004138223.1| PREDICTED: general transcription factor IIE ... 70 1e-09
ref|XP_006440911.1| hypothetical protein CICLE_v10019993mg [Citr... 70 2e-09
gb|EOX93216.1| General transcription factor IIE subunit 1 isofor... 68 7e-09
ref|XP_006485745.1| PREDICTED: general transcription factor IIE ... 68 9e-09
gb|EOX93214.1| General transcription factor IIE subunit 1 isofor... 67 2e-08
ref|XP_004299240.1| PREDICTED: general transcription factor IIE ... 63 3e-07
gb|ABR16597.1| unknown [Picea sitchensis] 61 9e-07
gb|EPS59132.1| hypothetical protein M569_15678, partial [Genlise... 60 1e-06
ref|XP_002889449.1| transcription initiation factor IIE alpha su... 58 1e-05
>emb|CAN74369.1| hypothetical protein VITISV_037867 [Vitis vinifera]
Length = 896
Score = 71.6 bits (174), Expect(2) = 9e-13
Identities = 54/141 (38%), Positives = 71/141 (50%), Gaps = 4/141 (2%)
Frame = +2
Query: 593 VQLKPLMEQLNRVKDFPVLEFGNXXXXXXXXXXXXPVNKWDL-SNDPSKSSQG-NSSGLP 766
VQLKPLM+QL+RVKD PV EFG+ + W+ +N + + G G P
Sbjct: 697 VQLKPLMDQLSRVKDLPVPEFGS-------------LQAWEARANAAGRXANGLGFGGTP 743
Query: 767 VLFFGEKKVKVAFSDATEK*VSLNSNFVIICNGPFSWL--LIISXXXXXXXXXXXRQDDV 940
+ F GE KV+VAFS K S I N L +I + V
Sbjct: 744 MPFVGETKVEVAFSGVGVKEEDSKSE---IANASLKVLPPWMIKEGMNLTKEQRGEDEYV 800
Query: 941 KAYYAALLQRQREQEESVKEQ 1003
KAYYAA+L+RQ+EQEE+ K+Q
Sbjct: 801 KAYYAAILKRQQEQEEAAKKQ 821
Score = 29.6 bits (65), Expect(2) = 9e-13
Identities = 20/49 (40%), Positives = 22/49 (44%)
Frame = +1
Query: 1036 GTSNECQVRMNCKXXXXXXXXXXXXXXXXALAGNTSKRFKVNDLNVLTD 1182
GTS+ QV M K AGN S+ FKVNDLNV D
Sbjct: 835 GTSSNRQVGMKSKRDEDEGDDDFEWEEAPT-AGNRSESFKVNDLNVQAD 882
>gb|EXC28058.1| General transcription factor IIE subunit 1 [Morus notabilis]
Length = 406
Score = 76.3 bits (186), Expect = 3e-11
Identities = 63/173 (36%), Positives = 79/173 (45%), Gaps = 34/173 (19%)
Frame = +2
Query: 587 MQVQLKPLMEQLNRVKDFPVLEFGNXXXXXXXXXXXXPVNKWDLS-NDPSKSSQG-NSSG 760
M+VQLKPLMEQL RVKD PV EFGN D + NDPS+SSQG G
Sbjct: 158 MEVQLKPLMEQLARVKDLPVPEFGNLQAWEARASAAARAANGDANGNDPSRSSQGIGYGG 217
Query: 761 LPVLFFGEKKVKVAFSDATEK*VSLNSNFVIICNGPF-SWLLIISXXXXXXXXXXXRQ-- 931
P+ F G+ KV+VAFS A K ++ S I W++ +Q
Sbjct: 218 TPMPFLGDTKVEVAFSGAEGKGENIKSEAESISLKVLPPWMIKQGMNLTKEQRGDIKQEA 277
Query: 932 ------------DD-----------------VKAYYAALLQRQREQEESVKEQ 1003
DD VKAYYAALL++Q+E EE+ K+Q
Sbjct: 278 KMDGSSTSAEISDDKKSTIEHDETKNIQDEYVKAYYAALLKKQQELEEAAKQQ 330
>ref|XP_002331723.1| predicted protein [Populus trichocarpa]
gi|566205569|ref|XP_006374149.1| transcription initiation
factor IIE alpha subunit family protein [Populus
trichocarpa] gi|550321822|gb|ERP51946.1| transcription
initiation factor IIE alpha subunit family protein
[Populus trichocarpa]
Length = 472
Score = 74.3 bits (181), Expect = 1e-10
Identities = 59/172 (34%), Positives = 79/172 (45%), Gaps = 30/172 (17%)
Frame = +2
Query: 587 MQVQLKPLMEQLNRVKDFPVLEFGNXXXXXXXXXXXXPVNKWDLS-NDPSKSSQGNSSGL 763
M+VQLKPLM QL+RVKD PV EFG+ D S NDPS+SSQG G
Sbjct: 228 MEVQLKPLMAQLSRVKDLPVPEFGSLQEWQIHASAAGRAANGDSSYNDPSRSSQG-YGGT 286
Query: 764 PVLFFGEKKVKVAFSDATE----K*VSLNSNFVIICNGPFSWLLIISXXXXXXXXXXXRQ 931
P+ F GE KV+V+FS K + ++ ++ + ++ +
Sbjct: 287 PMPFLGETKVEVSFSGVEGKEDLKSETASTGLKVLPPWMIKQGMNLTKEQRGEVKQGSKM 346
Query: 932 DD-------------------------VKAYYAALLQRQREQEESVKEQNRI 1012
DD VKAYYAALLQ+QRE EES ++Q +
Sbjct: 347 DDSSAAAEPPDDKKISIENDDKIKDEYVKAYYAALLQKQREAEESAEKQQEL 398
>ref|XP_003633196.1| PREDICTED: general transcription factor IIE subunit 1-like [Vitis
vinifera] gi|297735317|emb|CBI17757.3| unnamed protein
product [Vitis vinifera]
Length = 475
Score = 73.2 bits (178), Expect = 2e-10
Identities = 61/176 (34%), Positives = 77/176 (43%), Gaps = 37/176 (21%)
Frame = +2
Query: 587 MQVQLKPLMEQLNRVKDFPVLEFGNXXXXXXXXXXXXPVNKWDL-SNDPSKSSQG-NSSG 760
M+VQLKPLM+QL+RVKD PV EFG+ D +ND SKSSQG G
Sbjct: 228 MEVQLKPLMDQLSRVKDLPVPEFGSLQAWEARANAAGRAANGDSNANDSSKSSQGLGFGG 287
Query: 761 LPVLFFGEKKVKVAFSDATEK*VSLNSNFVIICNGPFS----WLLIISXXXXXXXXXXXR 928
P+ F GE KV+VAFS K S I N W++ +
Sbjct: 288 TPMPFVGETKVEVAFSGVGVKEEDSKSE---IANASLKVLPPWMIKEGMNLTKEQRGEIK 344
Query: 929 QDD-------------------------------VKAYYAALLQRQREQEESVKEQ 1003
Q+ VKAYYAA+L+RQ+EQEE+ K+Q
Sbjct: 345 QESKMGSSSAPLGSSDDKKSTTNKDEEKNLQDEYVKAYYAAILKRQQEQEEAAKKQ 400
>ref|XP_004138223.1| PREDICTED: general transcription factor IIE subunit 1-like [Cucumis
sativus]
Length = 475
Score = 70.5 bits (171), Expect = 1e-09
Identities = 62/179 (34%), Positives = 80/179 (44%), Gaps = 37/179 (20%)
Frame = +2
Query: 587 MQVQLKPLMEQLNRVKDFPVLEFGNXXXXXXXXXXXXPVNKWDLS-NDPSKSSQGNSSGL 763
M+ QLKPL+EQL+RVKD PV EFG DL+ NDPSKSSQG G
Sbjct: 229 MEAQLKPLVEQLSRVKDLPVPEFGTLLAWEARASAAARGINGDLNGNDPSKSSQG-YGGT 287
Query: 764 PVLFFGEKKVKVAFSDA-----TEK*VSLNSNFVIICNGPFSWLL--------------- 883
P+ F GE KV+VAFS A K S N++ ++ W++
Sbjct: 288 PMPFVGETKVEVAFSGAEGTGVDAKSESENTSLKVLP----PWMIKKGMNLTKEQRGEVK 343
Query: 884 --------IISXXXXXXXXXXXRQDD--------VKAYYAALLQRQREQEESVKEQNRI 1012
S DD VKAYYAA+L++Q+E EE+ K Q +
Sbjct: 344 DESKTDAGSASAQFSDDKKSLANDDDKTNIQDEYVKAYYAAILKKQQELEEAAKGQQEL 402
>ref|XP_006440911.1| hypothetical protein CICLE_v10019993mg [Citrus clementina]
gi|557543173|gb|ESR54151.1| hypothetical protein
CICLE_v10019993mg [Citrus clementina]
Length = 474
Score = 69.7 bits (169), Expect = 2e-09
Identities = 56/171 (32%), Positives = 75/171 (43%), Gaps = 32/171 (18%)
Frame = +2
Query: 587 MQVQLKPLMEQLNRVKDFPVLEFGNXXXXXXXXXXXXPVNKWD-LSNDPSKSSQGNSSGL 763
++VQLKPLMEQ+NRVKD V EFG D SNDP+KSSQG G
Sbjct: 230 LEVQLKPLMEQINRVKDLDVPEFGTLQAWEARASAAGRAANGDSSSNDPNKSSQG-YGGT 288
Query: 764 PVLFFGEKKVKVAFSDATEK*VSLNSNFVIICNGPF-SWLLIISXXXXXXXXXXXRQDD- 937
P+ F G+ KV+VAFS A K V + S W++ +Q+
Sbjct: 289 PMPFLGDTKVEVAFSGAEGKQVDVKSETDSTPQKVLPPWMIKQGMNLTKEQRGEVKQESK 348
Query: 938 -----------------------------VKAYYAALLQRQREQEESVKEQ 1003
++AYYAALL++Q+E +E+ K Q
Sbjct: 349 MDGSSATGGLSDDKKSTVEDDKASLQDEYIRAYYAALLKKQQELDEAAKNQ 399
>gb|EOX93216.1| General transcription factor IIE subunit 1 isoform 3 [Theobroma
cacao]
Length = 473
Score = 68.2 bits (165), Expect = 7e-09
Identities = 59/176 (33%), Positives = 79/176 (44%), Gaps = 34/176 (19%)
Frame = +2
Query: 587 MQVQLKPLMEQLNRVKDFPVLEFGN-XXXXXXXXXXXXPVNKWDLSNDPSKSSQGNSSGL 763
M+VQLKPLMEQL+RVKD PV EFG+ +N SND S+SSQG G
Sbjct: 229 MEVQLKPLMEQLSRVKDLPVPEFGSLQAWEARASAAGRAINGDSGSNDLSRSSQG-YGGT 287
Query: 764 PVLFFGEKKVKVAFS--DATEK*VSLNSNFVIICNGPFSWLLIISXXXXXXXXXXXRQDD 937
P+ F GE KV+VAFS D E+ S + P W++ +Q+
Sbjct: 288 PMPFLGETKVEVAFSGLDGKEEDAKSESAGTSLKVLP-PWMIKQGMNLTKEQRGEVKQES 346
Query: 938 -------------------------------VKAYYAALLQRQREQEESVKEQNRI 1012
+KAYYAAL ++Q+E EE+ K+Q +
Sbjct: 347 KTDGTSAQPDFSDDKKSTIGTDDKKNLQDEYLKAYYAALYKKQQELEEAAKKQEEL 402
>ref|XP_006485745.1| PREDICTED: general transcription factor IIE subunit 1-like [Citrus
sinensis]
Length = 474
Score = 67.8 bits (164), Expect = 9e-09
Identities = 55/171 (32%), Positives = 74/171 (43%), Gaps = 32/171 (18%)
Frame = +2
Query: 587 MQVQLKPLMEQLNRVKDFPVLEFGNXXXXXXXXXXXXPVNKWD-LSNDPSKSSQGNSSGL 763
++V LKPLMEQ+NRVKD V EFG D SNDP+KSSQG G
Sbjct: 230 LEVHLKPLMEQINRVKDLDVPEFGTLQAWEARASAAGRAANGDSSSNDPNKSSQG-YGGT 288
Query: 764 PVLFFGEKKVKVAFSDATEK*VSLNSNFVIICNGPF-SWLLIISXXXXXXXXXXXRQDD- 937
P+ F G+ KV+VAFS A K V + S W++ +Q+
Sbjct: 289 PMPFLGDTKVEVAFSGAEGKQVDVKSETDSTPQKVLPPWMIKQGMNLTKEQRGEVKQESK 348
Query: 938 -----------------------------VKAYYAALLQRQREQEESVKEQ 1003
++AYYAALL++Q+E +E+ K Q
Sbjct: 349 MDGSSATGGLSDDKKSTVEDDKTSLQDEYIRAYYAALLKKQQELDEAAKNQ 399
>gb|EOX93214.1| General transcription factor IIE subunit 1 isoform 1 [Theobroma
cacao]
Length = 475
Score = 67.0 bits (162), Expect = 2e-08
Identities = 58/180 (32%), Positives = 80/180 (44%), Gaps = 34/180 (18%)
Frame = +2
Query: 575 ENCSMQVQLKPLMEQLNRVKDFPVLEFGN-XXXXXXXXXXXXPVNKWDLSNDPSKSSQGN 751
+ ++VQLKPLMEQL+RVKD PV EFG+ +N SND S+SSQG
Sbjct: 227 QKMELKVQLKPLMEQLSRVKDLPVPEFGSLQAWEARASAAGRAINGDSGSNDLSRSSQG- 285
Query: 752 SSGLPVLFFGEKKVKVAFS--DATEK*VSLNSNFVIICNGPFSWLLIISXXXXXXXXXXX 925
G P+ F GE KV+VAFS D E+ S + P W++
Sbjct: 286 YGGTPMPFLGETKVEVAFSGLDGKEEDAKSESAGTSLKVLP-PWMIKQGMNLTKEQRGEV 344
Query: 926 RQDD-------------------------------VKAYYAALLQRQREQEESVKEQNRI 1012
+Q+ +KAYYAAL ++Q+E EE+ K+Q +
Sbjct: 345 KQESKTDGTSAQPDFSDDKKSTIGTDDKKNLQDEYLKAYYAALYKKQQELEEAAKKQEEL 404
>ref|XP_004299240.1| PREDICTED: general transcription factor IIE subunit 1-like
[Fragaria vesca subsp. vesca]
Length = 451
Score = 62.8 bits (151), Expect = 3e-07
Identities = 35/76 (46%), Positives = 43/76 (56%)
Frame = +2
Query: 584 SMQVQLKPLMEQLNRVKDFPVLEFGNXXXXXXXXXXXXPVNKWDLSNDPSKSSQGNSSGL 763
+M+VQLKPLMEQ+NRVKD P EFG + S DPSKSS G G
Sbjct: 228 NMEVQLKPLMEQINRVKDLPPPEFGTLQAWEARAHAQRRAENGESSGDPSKSSHG-YGGT 286
Query: 764 PVLFFGEKKVKVAFSD 811
P+ F G+ KV+V F +
Sbjct: 287 PMPFLGDTKVEVDFDN 302
>gb|ABR16597.1| unknown [Picea sitchensis]
Length = 480
Score = 61.2 bits (147), Expect = 9e-07
Identities = 38/76 (50%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
Frame = +2
Query: 587 MQVQLKPLMEQLNRVKDFPVLEFGNXXXXXXXXXXXXPVNKWDL-SNDPSKSSQGNS-SG 760
M+VQLKPLMEQL RVKD PV EFG+ D +N+ SKSSQG G
Sbjct: 229 MEVQLKPLMEQLTRVKDLPVPEFGSLLQWEARAIAAGRAVSGDTNANESSKSSQGQGFGG 288
Query: 761 LPVLFFGEKKVKVAFS 808
P+ F GE KV+VA S
Sbjct: 289 TPMPFLGETKVEVALS 304
>gb|EPS59132.1| hypothetical protein M569_15678, partial [Genlisea aurea]
Length = 371
Score = 60.5 bits (145), Expect = 1e-06
Identities = 39/80 (48%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Frame = +2
Query: 587 MQVQLKPLMEQLNRVKDFPVLEFGNXXXXXXXXXXXXPVNKWDL-SNDPSKSSQGNSSGL 763
M+ QLKPL +QL RVKD PV EFG+ D S DPS+SSQG G
Sbjct: 222 MEEQLKPLTDQLARVKDLPVPEFGSLQSWELRAKAAGRSANGDAGSGDPSRSSQG-FGGT 280
Query: 764 PVLFFGEKKVKVAFSDATEK 823
P+ F GE KV+VAFS EK
Sbjct: 281 PMPFVGETKVEVAFSGIDEK 300
>ref|XP_002889449.1| transcription initiation factor IIE alpha subunit family protein
[Arabidopsis lyrata subsp. lyrata]
gi|297335291|gb|EFH65708.1| transcription initiation
factor IIE alpha subunit family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 480
Score = 57.8 bits (138), Expect = 1e-05
Identities = 33/78 (42%), Positives = 42/78 (53%)
Frame = +2
Query: 587 MQVQLKPLMEQLNRVKDFPVLEFGNXXXXXXXXXXXXPVNKWDLSNDPSKSSQGNSSGLP 766
++VQ+KPLM+QLNRVKD P+ EFG+ N NDP +S G S P
Sbjct: 234 LEVQMKPLMDQLNRVKDLPIPEFGSFLAWEARAAMAARANGDLNPNDPLRSQSGYGS-TP 292
Query: 767 VLFFGEKKVKVAFSDATE 820
+ F GE KV+V D E
Sbjct: 293 MPFLGETKVEVNLGDGNE 310