BLASTX nr result
ID: Catharanthus22_contig00017805
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Catharanthus22_contig00017805 (571 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_006590026.1| PREDICTED: uncharacterized protein LOC102660... 89 8e-16 ref|XP_006584200.1| PREDICTED: putative ribonuclease H protein A... 84 2e-14 ref|XP_006584390.1| PREDICTED: putative ribonuclease H protein A... 76 7e-12 ref|XP_006582752.1| PREDICTED: uncharacterized protein LOC102662... 75 9e-12 ref|XP_006586426.1| PREDICTED: putative ribonuclease H protein A... 75 1e-11 dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like ... 71 8e-11 dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana] 71 8e-11 gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana] 70 2e-10 gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana] 67 3e-10 gb|AAD15471.1| putative non-LTR retroelement reverse transcripta... 69 4e-10 ref|XP_006582615.1| PREDICTED: uncharacterized protein LOC102665... 70 5e-10 emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga... 69 8e-10 gb|AAC33226.1| putative non-LTR retroelement reverse transcripta... 67 1e-09 emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga... 68 1e-09 gb|ABV21212.1| Ty1_Copia-element protein [Arabidopsis thaliana] 62 3e-09 gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm,... 64 9e-09 ref|XP_006605183.1| PREDICTED: uncharacterized protein LOC102663... 64 3e-08 gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transc... 61 4e-08 ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298... 61 7e-08 gb|ABD96948.1| hypothetical protein [Cleome spinosa] 62 7e-08 >ref|XP_006590026.1| PREDICTED: uncharacterized protein LOC102660482 [Glycine max] Length = 303 Score = 89.0 bits (219), Expect = 8e-16 Identities = 43/94 (45%), Positives = 59/94 (62%) Frame = -1 Query: 568 SRIFTLTRFPGGFTPFRCLGIPLA*IYFKAADFSPLLDKVSNTLQSWVRLDLSYAGRLEV 389 S I LT F G PFR LG+PL ++PLL K++ +Q W R LSYAG+LE+ Sbjct: 77 SHIQQLTGFSLGGFPFRYLGVPLLSSRLNVCHYAPLLSKITGLIQGWSRKSLSYAGKLEL 136 Query: 388 FRTVVQGIESFWLGILPVFVTVLEKITCFCKRFL 287 R V+QGI +FW+GI P+ +VL++I C+ FL Sbjct: 137 IRAVIQGIVNFWIGIFPLPQSVLDRINASCRNFL 170 >ref|XP_006584200.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine max] Length = 239 Score = 84.3 bits (207), Expect = 2e-14 Identities = 42/94 (44%), Positives = 57/94 (60%) Frame = -1 Query: 568 SRIFTLTRFPGGFTPFRCLGIPLA*IYFKAADFSPLLDKVSNTLQSWVRLDLSYAGRLEV 389 S I LT F G PFR LG+PL ++PLL K++ +Q W R LSYAG+LE+ Sbjct: 77 SHIQQLTGFNLGGFPFRYLGVPLLSSRLNVCHYAPLLSKITGLIQGWSRKSLSYAGKLEL 136 Query: 388 FRTVVQGIESFWLGILPVFVTVLEKITCFCKRFL 287 R V+QGI +FW+ I P+ +VL++I C FL Sbjct: 137 IRAVIQGIVNFWMKIFPLSQSVLDRINASCCNFL 170 >ref|XP_006584390.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine max] Length = 316 Score = 75.9 bits (185), Expect = 7e-12 Identities = 39/94 (41%), Positives = 54/94 (57%) Frame = -1 Query: 568 SRIFTLTRFPGGFTPFRCLGIPLA*IYFKAADFSPLLDKVSNTLQSWVRLDLSYAGRLEV 389 S I LT F G PFR LG PL ++PLL K+ +Q W + LSY G+LE+ Sbjct: 110 SHIQQLTGFSLGGFPFRYLGAPLLSSRLNVCHYAPLLYKIVGLIQGWNKKSLSYVGKLEL 169 Query: 388 FRTVVQGIESFWLGILPVFVTVLEKITCFCKRFL 287 + V+QGI +FW+ I P+ +VL++I C FL Sbjct: 170 IKAVIQGIMNFWMRIFPLPQSVLDRINASCCNFL 203 >ref|XP_006582752.1| PREDICTED: uncharacterized protein LOC102662758 [Glycine max] Length = 151 Score = 75.5 bits (184), Expect = 9e-12 Identities = 36/78 (46%), Positives = 48/78 (61%) Frame = -1 Query: 568 SRIFTLTRFPGGFTPFRCLGIPLA*IYFKAADFSPLLDKVSNTLQSWVRLDLSYAGRLEV 389 S I LT F G PFR LG+PL ++PLL K++ +Q W R LSY G+LE+ Sbjct: 73 SHIQQLTGFSLGGFPFRYLGVPLLSSRLNVCHYAPLLSKITGLIQGWSRKSLSYTGKLEL 132 Query: 388 FRTVVQGIESFWLGILPV 335 R V+QGI +FW+GI P+ Sbjct: 133 IRAVIQGILNFWMGIFPL 150 >ref|XP_006586426.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine max] Length = 192 Score = 75.1 bits (183), Expect = 1e-11 Identities = 38/94 (40%), Positives = 55/94 (58%) Frame = -1 Query: 568 SRIFTLTRFPGGFTPFRCLGIPLA*IYFKAADFSPLLDKVSNTLQSWVRLDLSYAGRLEV 389 S I LT F G PFR LG+PL ++ LL K++ +Q W + LSYAG+LE+ Sbjct: 34 SHIQQLTGFSLGDFPFRYLGVPLLSSRLNVCHYALLLSKITGLIQGWSKKSLSYAGKLEL 93 Query: 388 FRTVVQGIESFWLGILPVFVTVLEKITCFCKRFL 287 R V+QGI +FW+ I + +V++ I C+ FL Sbjct: 94 IRAVIQGIVNFWMEIFSLPQSVMDWINASCRNFL 127 >dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis thaliana] Length = 1072 Score = 70.9 bits (172), Expect(2) = 8e-11 Identities = 35/89 (39%), Positives = 53/89 (59%) Frame = -1 Query: 544 FPGGFTPFRCLGIPLA*IYFKAADFSPLLDKVSNTLQSWVRLDLSYAGRLEVFRTVVQGI 365 FP G P R LG+PL + AD+ PLL+K+S L+SWV LS+AGR ++ +V+ G+ Sbjct: 615 FPAGTFPIRYLGLPLMCRKLRIADYGPLLEKLSARLRSWVSKALSFAGRTQLISSVIFGL 674 Query: 364 ESFWLGILPVFVTVLEKITCFCKRFLSDG 278 +FW+ + ++KI C +FL G Sbjct: 675 INFWMSTFLLPKGCIKKIESLCSKFLWAG 703 Score = 21.6 bits (44), Expect(2) = 8e-11 Identities = 8/12 (66%), Positives = 8/12 (66%) Frame = -3 Query: 248 CLDKEHGGLGIR 213 CL K GGLG R Sbjct: 719 CLPKSEGGLGFR 730 >dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana] Length = 1072 Score = 70.9 bits (172), Expect(2) = 8e-11 Identities = 35/89 (39%), Positives = 53/89 (59%) Frame = -1 Query: 544 FPGGFTPFRCLGIPLA*IYFKAADFSPLLDKVSNTLQSWVRLDLSYAGRLEVFRTVVQGI 365 FP G P R LG+PL + AD+ PLL+K+S L+SWV LS+AGR ++ +V+ G+ Sbjct: 615 FPAGTFPIRYLGLPLMCRKLRIADYGPLLEKLSARLRSWVSKALSFAGRTQLISSVIFGL 674 Query: 364 ESFWLGILPVFVTVLEKITCFCKRFLSDG 278 +FW+ + ++KI C +FL G Sbjct: 675 INFWMSTFLLPKGCIKKIESLCSKFLWAG 703 Score = 21.6 bits (44), Expect(2) = 8e-11 Identities = 8/12 (66%), Positives = 8/12 (66%) Frame = -3 Query: 248 CLDKEHGGLGIR 213 CL K GGLG R Sbjct: 719 CLPKSEGGLGFR 730 >gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana] Length = 740 Score = 69.7 bits (169), Expect(2) = 2e-10 Identities = 35/98 (35%), Positives = 52/98 (53%) Frame = -1 Query: 571 KSRIFTLTRFPGGFTPFRCLGIPLA*IYFKAADFSPLLDKVSNTLQSWVRLDLSYAGRLE 392 ++ I + F G P R LG+PL AD+SPLLDKV + + SW LSYAGRL Sbjct: 326 RNNILSAFPFASGQLPVRYLGLPLLTKQMTTADYSPLLDKVRSKISSWTARSLSYAGRLA 385 Query: 391 VFRTVVQGIESFWLGILPVFVTVLEKITCFCKRFLSDG 278 + +V+ + +FW+ + +++I C FL G Sbjct: 386 LINSVIVSLSNFWMSAYRLPAGCIKEIEKLCSAFLWSG 423 Score = 21.2 bits (43), Expect(2) = 2e-10 Identities = 8/14 (57%), Positives = 11/14 (78%) Frame = -3 Query: 254 TLCLDKEHGGLGIR 213 +LC K+ GGLGI+ Sbjct: 437 SLCKLKQEGGLGIK 450 >gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana] Length = 1213 Score = 66.6 bits (161), Expect(2) = 3e-10 Identities = 32/89 (35%), Positives = 52/89 (58%) Frame = -1 Query: 544 FPGGFTPFRCLGIPLA*IYFKAADFSPLLDKVSNTLQSWVRLDLSYAGRLEVFRTVVQGI 365 FP G P R LG+PL + A++ PLL+K++ +SWV LS+AGR+++ +V+ G Sbjct: 755 FPIGTLPIRYLGLPLMNRKLRIAEYEPLLEKITARFRSWVNKCLSFAGRIQLISSVIFGS 814 Query: 364 ESFWLGILPVFVTVLEKITCFCKRFLSDG 278 +FW+ + +++I C RFL G Sbjct: 815 INFWMSTFLLPKGCIKRIESLCSRFLWSG 843 Score = 23.9 bits (50), Expect(2) = 3e-10 Identities = 9/13 (69%), Positives = 10/13 (76%) Frame = -3 Query: 251 LCLDKEHGGLGIR 213 LCL K GGLG+R Sbjct: 858 LCLPKSEGGLGLR 870 >gb|AAD15471.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis thaliana] Length = 1277 Score = 68.9 bits (167), Expect(2) = 4e-10 Identities = 35/98 (35%), Positives = 51/98 (52%) Frame = -1 Query: 571 KSRIFTLTRFPGGFTPFRCLGIPLA*IYFKAADFSPLLDKVSNTLQSWVRLDLSYAGRLE 392 ++ I + F G P R LG PL AD+SPLLDKV + + SW LSYAGRL Sbjct: 895 RNNILSAFPFASGQLPVRYLGFPLLTKQMTTADYSPLLDKVRSKISSWTARSLSYAGRLA 954 Query: 391 VFRTVVQGIESFWLGILPVFVTVLEKITCFCKRFLSDG 278 + +V+ + +FW+ + +++I C FL G Sbjct: 955 LINSVIVSLSNFWMSAYRLPAGCIKEIEKLCSAFLWSG 992 Score = 21.2 bits (43), Expect(2) = 4e-10 Identities = 8/14 (57%), Positives = 11/14 (78%) Frame = -3 Query: 254 TLCLDKEHGGLGIR 213 +LC K+ GGLGI+ Sbjct: 1006 SLCKLKQEGGLGIK 1019 >ref|XP_006582615.1| PREDICTED: uncharacterized protein LOC102665746 [Glycine max] Length = 506 Score = 69.7 bits (169), Expect = 5e-10 Identities = 34/98 (34%), Positives = 54/98 (55%) Frame = -1 Query: 571 KSRIFTLTRFPGGFTPFRCLGIPLA*IYFKAADFSPLLDKVSNTLQSWVRLDLSYAGRLE 392 K I ++ F G PF+ LG+P+ +SPL+DK+ ++ W LSYAGRL+ Sbjct: 124 KREILEVSGFQEGQLPFKYLGVPVTSKKLSTIHYSPLIDKIVGKIKHWTARLLSYAGRLQ 183 Query: 391 VFRTVVQGIESFWLGILPVFVTVLEKITCFCKRFLSDG 278 + +V+ + ++WL P +VL+KI C+ FL G Sbjct: 184 LVNSVMFALTNYWLNCFPFPKSVLQKIEAICRIFLWTG 221 >emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris] Length = 1114 Score = 68.9 bits (167), Expect = 8e-10 Identities = 32/90 (35%), Positives = 54/90 (60%) Frame = -1 Query: 547 RFPGGFTPFRCLGIPLA*IYFKAADFSPLLDKVSNTLQSWVRLDLSYAGRLEVFRTVVQG 368 + P G PFR LG+PLA + PL+DK++ Q WV LSYAGRL++ +T++ Sbjct: 749 QMPIGSLPFRYLGVPLASKKLNFSQCKPLIDKITTRAQGWVAHLLSYAGRLQLVKTILYS 808 Query: 367 IESFWLGILPVFVTVLEKITCFCKRFLSDG 278 ++++W I P+ +++ + C++FL G Sbjct: 809 MQNYWGQIFPLPKKLIKAVETTCRKFLWTG 838 >gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis thaliana] Length = 1529 Score = 67.4 bits (163), Expect(2) = 1e-09 Identities = 36/98 (36%), Positives = 51/98 (52%), Gaps = 2/98 (2%) Frame = -1 Query: 565 RIFTLTRFP--GGFTPFRCLGIPLA*IYFKAADFSPLLDKVSNTLQSWVRLDLSYAGRLE 392 R+ TL+ FP G P R LG+PL AD+SPL++ V + SW LSYAGRL Sbjct: 1050 RVQTLSSFPFANGQLPVRYLGLPLLTKQMTTADYSPLIEAVKTKISSWTARSLSYAGRLA 1109 Query: 391 VFRTVVQGIESFWLGILPVFVTVLEKITCFCKRFLSDG 278 + +V+ I +FW+ + + +I C FL G Sbjct: 1110 LLNSVIVSIANFWMSAYRLPAGCIREIEKLCSAFLWSG 1147 Score = 21.2 bits (43), Expect(2) = 1e-09 Identities = 7/14 (50%), Positives = 11/14 (78%) Frame = -3 Query: 254 TLCLDKEHGGLGIR 213 ++C K+ GGLGI+ Sbjct: 1161 SICQPKKEGGLGIK 1174 >emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris] Length = 1110 Score = 68.2 bits (165), Expect = 1e-09 Identities = 30/87 (34%), Positives = 53/87 (60%) Frame = -1 Query: 535 GFTPFRCLGIPLA*IYFKAADFSPLLDKVSNTLQSWVRLDLSYAGRLEVFRTVVQGIESF 356 G PFR LG+PL A PL++ ++N Q+W+ LSYAGRL++ ++++ ++++ Sbjct: 750 GELPFRYLGVPLTSKKLTYAQCKPLVEMITNRAQTWMAKLLSYAGRLQLIKSILSSMQNY 809 Query: 355 WLGILPVFVTVLEKITCFCKRFLSDGK 275 W I P+ V++ + C++FL GK Sbjct: 810 WAHIFPLSKKVIQAVEKVCRKFLWTGK 836 >gb|ABV21212.1| Ty1_Copia-element protein [Arabidopsis thaliana] Length = 438 Score = 62.0 bits (149), Expect(2) = 3e-09 Identities = 32/89 (35%), Positives = 46/89 (51%) Frame = -1 Query: 544 FPGGFTPFRCLGIPLA*IYFKAADFSPLLDKVSNTLQSWVRLDLSYAGRLEVFRTVVQGI 365 FP P R LG+PL K ++F PL+ K+ L W LS+AGRL++ +V+ GI Sbjct: 26 FPFANLPIRYLGLPLMSRKLKISEFEPLVVKIKAKLNFWAVKSLSFAGRLQLLSSVISGI 85 Query: 364 ESFWLGILPVFVTVLEKITCFCKRFLSDG 278 FW+ + + +I C RFL G Sbjct: 86 VVFWMSTFRLPKGCIREIESMCARFLWSG 114 Score = 25.0 bits (53), Expect(2) = 3e-09 Identities = 10/17 (58%), Positives = 12/17 (70%) Frame = -3 Query: 254 TLCLDKEHGGLGIRPGT 204 T+CL K GGLG+R T Sbjct: 128 TVCLPKAEGGLGVRKFT 144 >gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm, score: 60.13) [Arabidopsis thaliana] Length = 1164 Score = 63.9 bits (154), Expect(2) = 9e-09 Identities = 31/86 (36%), Positives = 51/86 (59%) Frame = -1 Query: 544 FPGGFTPFRCLGIPLA*IYFKAADFSPLLDKVSNTLQSWVRLDLSYAGRLEVFRTVVQGI 365 F G P R LG+PL A+++PL++K++ SWV LS+AGR+++ +V+ GI Sbjct: 652 FKLGSLPVRYLGLPLMSRKLTIAEYAPLIEKITARFNSWVVRLLSFAGRVQLLASVISGI 711 Query: 364 ESFWLGILPVFVTVLEKITCFCKRFL 287 +FW+ + + ++KI C RFL Sbjct: 712 VNFWISSFILPLGCIKKIESLCSRFL 737 Score = 21.6 bits (44), Expect(2) = 9e-09 Identities = 7/13 (53%), Positives = 10/13 (76%) Frame = -3 Query: 251 LCLDKEHGGLGIR 213 +CL K GG+G+R Sbjct: 755 VCLPKAEGGIGLR 767 >ref|XP_006605183.1| PREDICTED: uncharacterized protein LOC102663533 [Glycine max] Length = 514 Score = 63.9 bits (154), Expect = 3e-08 Identities = 29/95 (30%), Positives = 52/95 (54%) Frame = -1 Query: 562 IFTLTRFPGGFTPFRCLGIPLA*IYFKAADFSPLLDKVSNTLQSWVRLDLSYAGRLEVFR 383 I +T F G P R LG+PL+ + PL++K+ ++ W LS AGR+++ R Sbjct: 230 ITKITGFEEGTLPVRYLGVPLSCKKLNVHHYLPLVEKIVGKIRHWSSKLLSIAGRIQLVR 289 Query: 382 TVVQGIESFWLGILPVFVTVLEKITCFCKRFLSDG 278 +++ I +W+ + P+ V++KI C+ F+ G Sbjct: 290 SIITAIAQYWMSVFPMPKKVIQKIDSICRSFIWSG 324 >gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transcriptase [Brassica napus] Length = 1214 Score = 61.2 bits (147), Expect(2) = 4e-08 Identities = 31/86 (36%), Positives = 46/86 (53%) Frame = -1 Query: 544 FPGGFTPFRCLGIPLA*IYFKAADFSPLLDKVSNTLQSWVRLDLSYAGRLEVFRTVVQGI 365 F G PFR LG+PL + +D+S L+DK++ W LS+AGRL++ +V+ Sbjct: 754 FVNGTFPFRYLGLPLLHRKLRRSDYSQLIDKIAARFNHWATKTLSFAGRLQLISSVIYST 813 Query: 364 ESFWLGILPVFVTVLEKITCFCKRFL 287 +FWL + L+ I C RFL Sbjct: 814 VNFWLSSFILPKCCLKTIEQMCNRFL 839 Score = 21.9 bits (45), Expect(2) = 4e-08 Identities = 8/12 (66%), Positives = 9/12 (75%) Frame = -3 Query: 248 CLDKEHGGLGIR 213 CL K GGLG+R Sbjct: 858 CLPKAEGGLGLR 869 >ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298394 [Fragaria vesca subsp. vesca] Length = 958 Score = 61.2 bits (147), Expect(2) = 7e-08 Identities = 33/91 (36%), Positives = 52/91 (57%), Gaps = 4/91 (4%) Frame = -1 Query: 562 IFTLTRFPGGFTPFRCLGIPLA*IYFKAADFSPLLDKVSNTLQSWVRLDLSYAGRLEVFR 383 + +T F G P R LGIPL + D SPLLD++ ++SW LS+AGRL++ + Sbjct: 578 VLQVTNFSLGTCPVRYLGIPLITSKLRMQDCSPLLDRIETRIKSWENKVLSFAGRLQLIQ 637 Query: 382 TVVQGIESFWLG--ILP--VFVTVLEKITCF 302 +V+ I+ +W ILP V + +++ CF Sbjct: 638 SVLSSIQVYWASHLILPKKVLKDIEKRLRCF 668 Score = 21.2 bits (43), Expect(2) = 7e-08 Identities = 8/13 (61%), Positives = 10/13 (76%) Frame = -3 Query: 251 LCLDKEHGGLGIR 213 +CL K GGLGI+ Sbjct: 687 ICLPKCEGGLGIK 699 >gb|ABD96948.1| hypothetical protein [Cleome spinosa] Length = 539 Score = 61.6 bits (148), Expect(2) = 7e-08 Identities = 34/96 (35%), Positives = 54/96 (56%), Gaps = 2/96 (2%) Frame = -1 Query: 568 SRIFTLTRFPGGFTPFRCLGIPLA*IYFKAADFSPLLDKVSNTLQSWVRLDLSYAGRLEV 389 S + + F G+ P R LG+ L+ + +D+ PLLD+V + SW LSYAGRL++ Sbjct: 201 STLCAVIGFTRGYLPVRYLGVSLSPVRLTKSDYQPLLDRVKAKINSWTTRYLSYAGRLQL 260 Query: 388 FRTVVQGIESFW--LGILPVFVTVLEKITCFCKRFL 287 TV+ G+ + W + +LP F T +++ C FL Sbjct: 261 VGTVIYGMVNAWGMIFMLPKFFT--KQVDRLCAGFL 294 Score = 20.8 bits (42), Expect(2) = 7e-08 Identities = 7/14 (50%), Positives = 10/14 (71%) Frame = -3 Query: 254 TLCLDKEHGGLGIR 213 T C ++ GGLG+R Sbjct: 307 TCCRPRKEGGLGLR 320