BLASTX nr result

ID: Catharanthus22_contig00017674 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00017674
         (1131 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006348665.1| PREDICTED: squamosa promoter-binding-like pr...    80   2e-12
ref|XP_004239031.1| PREDICTED: squamosa promoter-binding-like pr...    77   1e-11

>ref|XP_006348665.1| PREDICTED: squamosa promoter-binding-like protein 6-like [Solanum
            tuberosum]
          Length = 558

 Score = 80.1 bits (196), Expect = 2e-12
 Identities = 77/241 (31%), Positives = 102/241 (42%), Gaps = 34/241 (14%)
 Frame = -2

Query: 1130 QLGAHLGSRFFEMTLLRSTSFRSSETLPGSFYYQERNVCYDHSSKHIKLEQVPIDISQLA 951
            Q   H GSRF +MT  R   F   E  PGSF+YQE N   ++++KH+KLE  P  ISQLA
Sbjct: 309  QFDTHWGSRFLDMTSQRRVPFLFPEIFPGSFFYQE-NYEDNNNNKHLKLEHKPFGISQLA 367

Query: 950  -EPENGQSPSNSRPILHLIRNQHYLETCNDGPVELELPMLPDSRCXXXXXXXXXXXXXSM 774
               +N Q P+ S    + ++ Q   +  + G                            +
Sbjct: 368  MSVKNEQFPAKSIQHHYGVKKQDPSKVLSGGETLSVQEFSEGQNSSCALSLLSAHSQNLL 427

Query: 773  GVSKRTSPSTRENQNTLVGVY--------QKSAKAFTGNR-------HFSSGTQNQV--- 648
              S   SP+ R        VY        +KS +    NR        F    Q+ V   
Sbjct: 428  HNSTDVSPTLRWTVEPNHHVYIKGDHHNLEKSPRVSVANRLTPIELYSFDVAEQDAVVQV 487

Query: 647  -GSPMVRSGFQKD-GHIQTSDY-------------TMDLFQLSSHLQRVEKLKSDMQMKQ 513
              S  V  G Q+D GH Q S+              TMDL QLSSHLQRVE+ K+ +Q+KQ
Sbjct: 488  PDSDAVSFGIQRDHGHDQRSNSINSRNCLSPEFGPTMDLVQLSSHLQRVEQQKNSVQVKQ 547

Query: 512  E 510
            E
Sbjct: 548  E 548


>ref|XP_004239031.1| PREDICTED: squamosa promoter-binding-like protein 6-like [Solanum
            lycopersicum]
          Length = 558

 Score = 77.0 bits (188), Expect = 1e-11
 Identities = 79/241 (32%), Positives = 99/241 (41%), Gaps = 34/241 (14%)
 Frame = -2

Query: 1130 QLGAHLGSRFFEMTLLRSTSFRSSETLPGSFYYQERNVCYDHSSKHIKLEQVPIDISQLA 951
            Q   H GSRF +MT  R   F   E  PGSF+YQE N   +++SKH KLE  P  ISQLA
Sbjct: 309  QFDTHWGSRFLDMTSQRRVPFLFPEIFPGSFFYQE-NYEDNNNSKHPKLEHKPFGISQLA 367

Query: 950  -EPENGQSPSNSRPILHLIRNQHYLETCNDGPVELELPMLPDSRCXXXXXXXXXXXXXSM 774
               +N Q P+ S    + +R Q   +    G                            +
Sbjct: 368  ISVKNEQFPAKSIQHQYGMRKQDPSKVHTGGTTLSIQEFSKGQNSSCALSLLSAHSQNLL 427

Query: 773  GVSKRTSPSTRENQNTLVGVYQKS-------------AKAFTGNRHFSSGTQNQ---VGS 642
              S   SP+ R        VY K               K+ T    +SS    Q   V  
Sbjct: 428  HNSTDVSPTLRWTVEPNHHVYVKGRDHNLEKSPRVSVVKSLTPTELYSSDVAEQDVVVQV 487

Query: 641  P---MVRSGFQKD-GHIQTSDY-------------TMDLFQLSSHLQRVEKLKSDMQMKQ 513
            P    V  G Q+D GH Q S+              TMDL QLSSHLQRVE+ K+ +Q+KQ
Sbjct: 488  PDCEAVSFGIQRDHGHDQRSNSINSKNCLSLEGGPTMDLVQLSSHLQRVEQQKNSVQVKQ 547

Query: 512  E 510
            E
Sbjct: 548  E 548


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