BLASTX nr result

ID: Catharanthus22_contig00017166 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00017166
         (359 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525372.1| hypothetical protein RCOM_0528090 [Ricinus c...    66   6e-09
ref|XP_004239340.1| PREDICTED: transcription factor ABORTED MICR...    64   2e-08
ref|XP_006356438.1| PREDICTED: transcription factor bHLH90-like ...    59   7e-07

>ref|XP_002525372.1| hypothetical protein RCOM_0528090 [Ricinus communis]
           gi|223535335|gb|EEF37010.1| hypothetical protein
           RCOM_0528090 [Ricinus communis]
          Length = 472

 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 37/97 (38%), Positives = 57/97 (58%), Gaps = 1/97 (1%)
 Frame = -3

Query: 300 MDMTAIIGDAIEYIQELQKNVKMYEDELKDMEEEYCSGYNVEQNVPNSCRE-HEVSDNQP 124
           MD+ +I+GDAIEYI ELQK  K  EDEL+ +EEE C   N +  +P    + HE     P
Sbjct: 331 MDIASILGDAIEYIGELQKEKKKLEDELEGIEEEECEKSNAQ--LPLKLEQLHEGRKPLP 388

Query: 123 ATEFTDNPSNLMADDLRQQMIKLEVNQIGAKDILLRI 13
             E  +N  +    +  +  +++EVNQIG ++ L+++
Sbjct: 389 PVEIDNNEDSSGFGEKEKIEVQIEVNQIGKREFLIKL 425


>ref|XP_004239340.1| PREDICTED: transcription factor ABORTED MICROSPORES-like [Solanum
           lycopersicum]
          Length = 510

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 39/115 (33%), Positives = 68/115 (59%), Gaps = 1/115 (0%)
 Frame = -3

Query: 354 FYVIIS-RVLISIFVFLP*MDMTAIIGDAIEYIQELQKNVKMYEDELKDMEEEYCSGYNV 178
           FYV IS +VLI   +    MD  AI+GD+I+YI ELQ+ VK+Y+ EL  +E E  +  + 
Sbjct: 338 FYVYISFKVLILSLLDFFQMDKVAILGDSIDYINELQEKVKLYKIELNKIEAEVTNNEST 397

Query: 177 EQNVPNSCREHEVSDNQPATEFTDNPSNLMADDLRQQMIKLEVNQIGAKDILLRI 13
            + V +     ++++    T  T+  + +  +   +  +++EVNQIGA++ LL++
Sbjct: 398 PEMVLS-----DMTEMSKVTGQTNEKTQISVNTTDRTRMEVEVNQIGAREFLLKV 447


>ref|XP_006356438.1| PREDICTED: transcription factor bHLH90-like [Solanum tuberosum]
          Length = 481

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 32/96 (33%), Positives = 55/96 (57%)
 Frame = -3

Query: 300 MDMTAIIGDAIEYIQELQKNVKMYEDELKDMEEEYCSGYNVEQNVPNSCREHEVSDNQPA 121
           MD  AI+GDAI+YI ELQ+ VK+YE EL  +E E  +  + E  +       ++++    
Sbjct: 329 MDKVAILGDAIDYINELQEKVKLYETELNKIEAEVTNNESPEMVL------SDMTERSKV 382

Query: 120 TEFTDNPSNLMADDLRQQMIKLEVNQIGAKDILLRI 13
           T  T+  + +  +   +   ++EV QIGA++ LL++
Sbjct: 383 TGQTNEKTQISVNTTDRTRTEVEVYQIGAREFLLKV 418


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