BLASTX nr result
ID: Catharanthus22_contig00016978
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00016978
(1137 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN83285.1| hypothetical protein VITISV_004139 [Vitis vinifera] 219 3e-66
emb|CAN60809.1| hypothetical protein VITISV_044451 [Vitis vinifera] 185 2e-55
gb|EPS73343.1| hypothetical protein M569_01413 [Genlisea aurea] 199 2e-48
emb|CAB40035.1| retrotransposon like protein [Arabidopsis thalia... 163 9e-48
gb|AAC35532.1| contains similarity to proteases [Arabidopsis tha... 162 2e-47
emb|CAN73071.1| hypothetical protein VITISV_032383 [Vitis vinifera] 167 1e-46
emb|CAN78022.1| hypothetical protein VITISV_015518 [Vitis vinifera] 165 4e-46
emb|CAN61640.1| hypothetical protein VITISV_021909 [Vitis vinifera] 164 1e-45
gb|AAF02855.1|AC009324_4 Similar to retrotransposon proteins [Ar... 155 2e-45
gb|AAD43604.1|AC005698_3 T3P18.3 [Arabidopsis thaliana] 162 3e-45
gb|AAK51235.1|AF287471_1 polyprotein [Arabidopsis thaliana] 162 9e-45
emb|CAA19715.1| putative protein [Arabidopsis thaliana] gi|72695... 155 1e-44
emb|CAC37623.1| copia-like polyprotein [Arabidopsis thaliana] 160 2e-44
emb|CAN71553.1| hypothetical protein VITISV_034738 [Vitis vinifera] 164 3e-44
emb|CAN72527.1| hypothetical protein VITISV_009255 [Vitis vinifera] 157 3e-44
gb|AAD21687.1| Strong similarity to gi|3600044 T12H20.12 proteas... 153 7e-44
emb|CAN67588.1| hypothetical protein VITISV_036280 [Vitis vinifera] 154 1e-43
emb|CAN75478.1| hypothetical protein VITISV_020209 [Vitis vinifera] 159 5e-43
emb|CAN64816.1| hypothetical protein VITISV_010668 [Vitis vinifera] 154 3e-42
gb|AAR88589.1| putative copia-like retrotransposon protein [Oryz... 160 1e-41
>emb|CAN83285.1| hypothetical protein VITISV_004139 [Vitis vinifera]
Length = 1556
Score = 219 bits (559), Expect(2) = 3e-66
Identities = 113/177 (63%), Positives = 133/177 (75%), Gaps = 2/177 (1%)
Frame = +3
Query: 444 QDAIYKPNRKYALLAT--GSDIPRISKSIKSALRHDGWKCAMDEEMQALHQNQTWSLVPR 617
Q I KPN KYAL +T + IPR +I+ AL H GWK AMDEE+QALH N+TW LVPR
Sbjct: 980 QRGIIKPNPKYALTSTTNSTSIPREPHNIRDALAHPGWKAAMDEELQALHTNKTWVLVPR 1039
Query: 618 DSSMHVIGCKWVLKPKLKPNGSLDRLKARLVAKRYRQIYGVD*TGTFLLVIKFGTIRLAF 797
S+MHVIG KWV KPKLKP+GSLDRLKAR+VAK Y Q+ G+D T TF VIK GTIR+
Sbjct: 1040 TSNMHVIGSKWVFKPKLKPDGSLDRLKARVVAKGYHQVDGLDYTETFSPVIKPGTIRMVL 1099
Query: 798 SLALVSH*DIRQLDV*NSFLHGVLIEDIYMEQSPGMTDPKFPNHVCKLQ*TLYGLKK 968
++ALV IRQLDV N+FLHG++ EDI+MEQ PGM D + P HVCKLQ LYGLK+
Sbjct: 1100 TIALVKKWPIRQLDVKNAFLHGLISEDIHMEQPPGMADLEHPTHVCKLQKALYGLKQ 1156
Score = 60.8 bits (146), Expect(2) = 3e-66
Identities = 26/33 (78%), Positives = 29/33 (87%)
Frame = +1
Query: 964 KKGPRAWFDRFSTFLLKYGFLYSLADPSLFVFY 1062
K+ PRAWFDRFS FLLKYGF SLADPSLF+F+
Sbjct: 1155 KQAPRAWFDRFSAFLLKYGFFCSLADPSLFIFH 1187
>emb|CAN60809.1| hypothetical protein VITISV_044451 [Vitis vinifera]
Length = 377
Score = 185 bits (469), Expect(2) = 2e-55
Identities = 91/136 (66%), Positives = 108/136 (79%)
Frame = +3
Query: 561 MDEEMQALHQNQTWSLVPRDSSMHVIGCKWVLKPKLKPNGSLDRLKARLVAKRYRQIYGV 740
MDEE+ ALH+N+TW LVPR S MHVIG KWV KPKLKP+GSLDRLKAR+VAK Y Q+ G+
Sbjct: 1 MDEELDALHKNKTWVLVPRTSDMHVIGSKWVFKPKLKPDGSLDRLKARVVAKGYHQVDGL 60
Query: 741 D*TGTFLLVIKFGTIRLAFSLALVSH*DIRQLDV*NSFLHGVLIEDIYMEQSPGMTDPKF 920
D T TF LVIK GTIR+ ++ALV I QLDV N+FLHG+++EDI+MEQ PGM D +
Sbjct: 61 DYTKTFSLVIKLGTIRMVITIALVQKWPICQLDVKNAFLHGLILEDIHMEQPPGMADLEH 120
Query: 921 PNHVCKLQ*TLYGLKK 968
P HVCKLQ LYGLK+
Sbjct: 121 PTHVCKLQKALYGLKQ 136
Score = 58.9 bits (141), Expect(2) = 2e-55
Identities = 25/33 (75%), Positives = 29/33 (87%)
Frame = +1
Query: 964 KKGPRAWFDRFSTFLLKYGFLYSLADPSLFVFY 1062
K+ PRAWFDRFS FLLKYGF SLA+PSLF+F+
Sbjct: 135 KQAPRAWFDRFSAFLLKYGFFCSLANPSLFIFH 167
>gb|EPS73343.1| hypothetical protein M569_01413 [Genlisea aurea]
Length = 776
Score = 199 bits (505), Expect = 2e-48
Identities = 102/168 (60%), Positives = 121/168 (72%), Gaps = 1/168 (0%)
Frame = +3
Query: 429 PWSLPQDAIYKPNRKYALLATGSD-IPRISKSIKSALRHDGWKCAMDEEMQALHQNQTWS 605
P + Q I KPN KYAL + D IP K++K A+ H GWK AM+EE+ ALH N+TW
Sbjct: 607 PRTRSQSGIVKPNPKYALYISHFDSIPLEPKTVKEAISHPGWKAAMEEELAALHHNETWL 666
Query: 606 LVPRDSSMHVIGCKWVLKPKLKPNGSLDRLKARLVAKRYRQIYGVD*TGTFLLVIKFGTI 785
LVPRD + H IGCKWV K KL+P+GSLDRLKARLVAK Y QI GVD T TF VI+ GTI
Sbjct: 667 LVPRDEASHTIGCKWVFKTKLRPDGSLDRLKARLVAKGYNQIDGVDYTETFSPVIRPGTI 726
Query: 786 RLAFSLALVSH*DIRQLDV*NSFLHGVLIEDIYMEQSPGMTDPKFPNH 929
RL S+AL + DIRQLDV N+FLHG + EDI+MEQ PGM + +FP H
Sbjct: 727 RLVLSIALTRNWDIRQLDVKNAFLHGKISEDIFMEQPPGMNNSQFPAH 774
>emb|CAB40035.1| retrotransposon like protein [Arabidopsis thaliana]
gi|7267767|emb|CAB81170.1| retrotransposon like protein
[Arabidopsis thaliana]
Length = 1515
Score = 163 bits (412), Expect(2) = 9e-48
Identities = 91/202 (45%), Positives = 122/202 (60%), Gaps = 5/202 (2%)
Frame = +3
Query: 378 PPLTSLIYLFL-----SHITITPWSLPQDAIYKPNRKYALLATGSDIPRISKSIKSALRH 542
PPL S+I SH IT + I KPN KYAL + S+ P KS+K AL+
Sbjct: 874 PPLQSVISSTTAAPETSHPMITR---AKSGITKPNPKYALFSVKSNYPE-PKSVKEALKD 929
Query: 543 DGWKCAMDEEMQALHQNQTWSLVPRDSSMHVIGCKWVLKPKLKPNGSLDRLKARLVAKRY 722
+GW AM EEM +H+ TW LVP + ++GCKWV K KL +GSLDRLKARLVA+ Y
Sbjct: 930 EGWTNAMGEEMGTMHETDTWDLVPPEMVDRLLGCKWVFKTKLNSDGSLDRLKARLVARGY 989
Query: 723 RQIYGVD*TGTFLLVIKFGTIRLAFSLALVSH*DIRQLDV*NSFLHGVLIEDIYMEQSPG 902
Q GVD T+ V++ T+R +A ++ ++QLDV N+FLH L E ++M Q PG
Sbjct: 990 EQEEGVDYVETYSPVVRSATVRSILHVATINKWSLKQLDVKNAFLHDELKETVFMTQPPG 1049
Query: 903 MTDPKFPNHVCKLQ*TLYGLKK 968
DP P++VCKL+ +Y LK+
Sbjct: 1050 FEDPSRPDYVCKLKKAIYDLKQ 1071
Score = 55.5 bits (132), Expect(2) = 9e-48
Identities = 22/32 (68%), Positives = 29/32 (90%)
Frame = +1
Query: 964 KKGPRAWFDRFSTFLLKYGFLYSLADPSLFVF 1059
K+ PRAWFD+FS++LLKYGF+ S +DPSLFV+
Sbjct: 1070 KQAPRAWFDKFSSYLLKYGFICSFSDPSLFVY 1101
>gb|AAC35532.1| contains similarity to proteases [Arabidopsis thaliana]
Length = 1392
Score = 162 bits (410), Expect(2) = 2e-47
Identities = 92/230 (40%), Positives = 124/230 (53%), Gaps = 28/230 (12%)
Frame = +3
Query: 363 YLCQHPPLTSLIYLFLSHITITPWSLPQDAIY---------------------------- 458
Y C HPP T +Y+ H+ P IY
Sbjct: 722 YRCLHPP-TGKVYI-CRHVLFDERKFPYSDIYSQFQTISGSPLFTAWQKGFSSTALSRIT 779
Query: 459 KPNRKYALLATGSDIPRISKSIKSALRHDGWKCAMDEEMQALHQNQTWSLVPRDSSMHVI 638
KPN KYAL + S+ P KS+K AL+ +GW AM EEM +H+ TW LVP + ++
Sbjct: 780 KPNPKYALFSVKSNYPE-PKSVKEALKDEGWTNAMGEEMGTMHETDTWDLVPPEMVDRLL 838
Query: 639 GCKWVLKPKLKPNGSLDRLKARLVAKRYRQIYGVD*TGTFLLVIKFGTIRLAFSLALVSH 818
GCKWV K KL +GSLDRLKARLVA+ Y Q GVD T+ V++ T+R +A ++
Sbjct: 839 GCKWVFKTKLNSDGSLDRLKARLVARGYEQEEGVDYVETYSPVVRSATVRSILHVATINK 898
Query: 819 *DIRQLDV*NSFLHGVLIEDIYMEQSPGMTDPKFPNHVCKLQ*TLYGLKK 968
++QLDV N+FLH L E ++M Q PG DP P++VCKL+ +Y LK+
Sbjct: 899 WSLKQLDVKNAFLHDELKETVFMTQPPGFEDPSRPDYVCKLKKAIYDLKQ 948
Score = 55.5 bits (132), Expect(2) = 2e-47
Identities = 22/32 (68%), Positives = 29/32 (90%)
Frame = +1
Query: 964 KKGPRAWFDRFSTFLLKYGFLYSLADPSLFVF 1059
K+ PRAWFD+FS++LLKYGF+ S +DPSLFV+
Sbjct: 947 KQAPRAWFDKFSSYLLKYGFICSFSDPSLFVY 978
>emb|CAN73071.1| hypothetical protein VITISV_032383 [Vitis vinifera]
Length = 1239
Score = 167 bits (423), Expect(2) = 1e-46
Identities = 82/151 (54%), Positives = 107/151 (70%)
Frame = +3
Query: 516 KSIKSALRHDGWKCAMDEEMQALHQNQTWSLVPRDSSMHVIGCKWVLKPKLKPNGSLDRL 695
K KSA ++ W AMDEE+QAL QN TW LVPR + +++G KWV + K P+GS++RL
Sbjct: 708 KGFKSAAKNPAWLAAMDEEVQALQQNGTWILVPRPVNTNIVGSKWVFRTKYFPDGSVERL 767
Query: 696 KARLVAKRYRQIYGVD*TGTFLLVIKFGTIRLAFSLALVSH*DIRQLDV*NSFLHGVLIE 875
KARLVAK Y Q+ G+D T TF V+K T+R+ SLA+ + +RQLDV N+FL+G L E
Sbjct: 768 KARLVAKGYTQVPGLDYTDTFSPVVKATTVRVVLSLAVTNKWPLRQLDVKNAFLNGTLTE 827
Query: 876 DIYMEQSPGMTDPKFPNHVCKLQ*TLYGLKK 968
+YMEQ PG DP+FP HVC L+ LYGLK+
Sbjct: 828 HVYMEQPPGYIDPRFPTHVCLLKKALYGLKQ 858
Score = 47.8 bits (112), Expect(2) = 1e-46
Identities = 22/33 (66%), Positives = 25/33 (75%)
Frame = +1
Query: 964 KKGPRAWFDRFSTFLLKYGFLYSLADPSLFVFY 1062
K+ PRAWF RFS+FLL GF S AD SLFVF+
Sbjct: 857 KQAPRAWFQRFSSFLLTLGFSCSRADTSLFVFH 889
>emb|CAN78022.1| hypothetical protein VITISV_015518 [Vitis vinifera]
Length = 1501
Score = 165 bits (418), Expect(2) = 4e-46
Identities = 81/151 (53%), Positives = 106/151 (70%)
Frame = +3
Query: 516 KSIKSALRHDGWKCAMDEEMQALHQNQTWSLVPRDSSMHVIGCKWVLKPKLKPNGSLDRL 695
K KSA ++ W AMDEE+QAL QN TW LVPR + +++G KWV + K P+GS++RL
Sbjct: 825 KGFKSAAKNPAWLAAMDEEVQALQQNGTWILVPRPVNTNIVGSKWVFRTKYLPDGSVERL 884
Query: 696 KARLVAKRYRQIYGVD*TGTFLLVIKFGTIRLAFSLALVSH*DIRQLDV*NSFLHGVLIE 875
KARLVAK Y + G+D T TF V+K T+R+ SLA+ + +RQLDV N+FL+G L E
Sbjct: 885 KARLVAKGYTXVPGLDYTDTFSPVVKATTVRVVLSLAVTNKWPLRQLDVKNAFLNGTLTE 944
Query: 876 DIYMEQSPGMTDPKFPNHVCKLQ*TLYGLKK 968
+YMEQ PG DP+FP HVC L+ LYGLK+
Sbjct: 945 HVYMEQPPGYIDPRFPTHVCLLKKALYGLKQ 975
Score = 47.8 bits (112), Expect(2) = 4e-46
Identities = 22/33 (66%), Positives = 25/33 (75%)
Frame = +1
Query: 964 KKGPRAWFDRFSTFLLKYGFLYSLADPSLFVFY 1062
K+ PRAWF RFS+FLL GF S AD SLFVF+
Sbjct: 974 KQAPRAWFQRFSSFLLTLGFSCSRADTSLFVFH 1006
>emb|CAN61640.1| hypothetical protein VITISV_021909 [Vitis vinifera]
Length = 1361
Score = 164 bits (414), Expect(2) = 1e-45
Identities = 77/151 (50%), Positives = 107/151 (70%)
Frame = +3
Query: 516 KSIKSALRHDGWKCAMDEEMQALHQNQTWSLVPRDSSMHVIGCKWVLKPKLKPNGSLDRL 695
+ KSA +H W AMD+E+ AL +N TW LVPR +V+GC+W+ K KL +GS++R
Sbjct: 841 RGFKSAAKHPEWLSAMDDEIHALKKNDTWVLVPRPQHHNVVGCRWIFKTKLHSDGSIERH 900
Query: 696 KARLVAKRYRQIYGVD*TGTFLLVIKFGTIRLAFSLALVSH*DIRQLDV*NSFLHGVLIE 875
KARLVA+ + Q++G+D TF V++ T+R+ SLA+ S + QLDV N+FLHG L E
Sbjct: 901 KARLVAQGFSQVHGLDFGDTFSPVVRPATVRIILSLAVTSGWRLHQLDVKNAFLHGFLNE 960
Query: 876 DIYMEQSPGMTDPKFPNHVCKLQ*TLYGLKK 968
++YMEQ PG TDP+FP HVC+L+ LYGLK+
Sbjct: 961 EVYMEQPPGYTDPQFPQHVCRLKRALYGLKQ 991
Score = 47.4 bits (111), Expect(2) = 1e-45
Identities = 21/33 (63%), Positives = 26/33 (78%)
Frame = +1
Query: 964 KKGPRAWFDRFSTFLLKYGFLYSLADPSLFVFY 1062
K+ PRAWF RFS+FLLK+GF S AD SLF ++
Sbjct: 990 KQAPRAWFHRFSSFLLKHGFHSSQADSSLFFYH 1022
>gb|AAF02855.1|AC009324_4 Similar to retrotransposon proteins [Arabidopsis thaliana]
Length = 1522
Score = 155 bits (392), Expect(2) = 2e-45
Identities = 79/175 (45%), Positives = 112/175 (64%)
Frame = +3
Query: 444 QDAIYKPNRKYALLATGSDIPRISKSIKSALRHDGWKCAMDEEMQALHQNQTWSLVPRDS 623
++ I KPN++Y LL IP K++ AL+H GW AM EEM + +TW+LVP
Sbjct: 894 KEGISKPNKRYVLLTHKVSIPE-PKTVTEALKHPGWNNAMQEEMGNCKETETWTLVPYSP 952
Query: 624 SMHVIGCKWVLKPKLKPNGSLDRLKARLVAKRYRQIYGVD*TGTFLLVIKFGTIRLAFSL 803
+M+V+G WV + KL +GSLD+LKARLVAK ++Q G+D T+ V++ T+RL +
Sbjct: 953 NMNVLGSMWVFRTKLHADGSLDKLKARLVAKGFKQEEGIDYLETYSPVVRTPTVRLILHV 1012
Query: 804 ALVSH*DIRQLDV*NSFLHGVLIEDIYMEQSPGMTDPKFPNHVCKLQ*TLYGLKK 968
A V +++Q+DV N+FLHG L E +YM Q G D P+HVC L +LYGLK+
Sbjct: 1013 ATVLKWELKQMDVKNAFLHGDLTETVYMRQPAGFVDKSKPDHVCLLHKSLYGLKQ 1067
Score = 55.1 bits (131), Expect(2) = 2e-45
Identities = 28/58 (48%), Positives = 34/58 (58%)
Frame = +1
Query: 964 KKGPRAWFDRFSTFLLKYGFLYSLADPSLFVFYCXXXXXXXXXXXXXXXXTGLDSQLL 1137
K+ PRAWFDRFS FLL++GF+ SL DPSLFV+ TG +SQ L
Sbjct: 1066 KQSPRAWFDRFSNFLLEFGFICSLFDPSLFVYSSNNDVILLLLYVDDMVITGNNSQSL 1123
>gb|AAD43604.1|AC005698_3 T3P18.3 [Arabidopsis thaliana]
Length = 1309
Score = 162 bits (410), Expect(2) = 3e-45
Identities = 82/175 (46%), Positives = 112/175 (64%)
Frame = +3
Query: 444 QDAIYKPNRKYALLATGSDIPRISKSIKSALRHDGWKCAMDEEMQALHQNQTWSLVPRDS 623
+D I KPN +YAL+ + S K+I +A++H GW A+ +E+ +H TWSLVP
Sbjct: 699 KDGIQKPNPRYALIVSKSSFDE-PKTITTAMKHPGWNAAVMDEIDRIHMLNTWSLVPATE 757
Query: 624 SMHVIGCKWVLKPKLKPNGSLDRLKARLVAKRYRQIYGVD*TGTFLLVIKFGTIRLAFSL 803
M+++ KWV K KLKP+G++D+LKARLVAK + Q GVD TF V++ TIRL
Sbjct: 758 DMNILTSKWVFKTKLKPDGTIDKLKARLVAKGFDQEEGVDYLETFSPVVRTATIRLVLDT 817
Query: 804 ALVSH*DIRQLDV*NSFLHGVLIEDIYMEQSPGMTDPKFPNHVCKLQ*TLYGLKK 968
A + ++QLDV N+FLHG L E ++M Q G DP PNHVC+L LYGLK+
Sbjct: 818 ATANEWPLKQLDVSNAFLHGELQEPVFMFQPSGFVDPNKPNHVCRLTKALYGLKQ 872
Score = 47.8 bits (112), Expect(2) = 3e-45
Identities = 21/31 (67%), Positives = 24/31 (77%)
Frame = +1
Query: 964 KKGPRAWFDRFSTFLLKYGFLYSLADPSLFV 1056
K+ PRAWFD FS FLL +GF S +DPSLFV
Sbjct: 871 KQAPRAWFDTFSNFLLDFGFECSTSDPSLFV 901
>gb|AAK51235.1|AF287471_1 polyprotein [Arabidopsis thaliana]
Length = 1453
Score = 162 bits (411), Expect(2) = 9e-45
Identities = 83/172 (48%), Positives = 113/172 (65%)
Frame = +3
Query: 453 IYKPNRKYALLATGSDIPRISKSIKSALRHDGWKCAMDEEMQALHQNQTWSLVPRDSSMH 632
I+K N +YALL + + KSI AL H GW A+++EM+ +H TWSLV M+
Sbjct: 867 IHKSNTRYALLTSKFSVEE-PKSIDEALNHPGWNNAVNDEMRTIHMLHTWSLVQPTEDMN 925
Query: 633 VIGCKWVLKPKLKPNGSLDRLKARLVAKRYRQIYGVD*TGTFLLVIKFGTIRLAFSLALV 812
++GC+WV K KLKP+GS+D+LKARLVAK + Q G+D TF V++ TIRL +A
Sbjct: 926 ILGCRWVFKTKLKPDGSVDKLKARLVAKGFHQEEGLDYLETFSPVVRTATIRLVLDVATA 985
Query: 813 SH*DIRQLDV*NSFLHGVLIEDIYMEQSPGMTDPKFPNHVCKLQ*TLYGLKK 968
+I+QLDV N+FLHG L E +YM Q PG D + P++VC+L LYGLK+
Sbjct: 986 KGWNIKQLDVSNAFLHGELKEPVYMLQPPGFVDQEKPSYVCRLTKALYGLKQ 1037
Score = 45.8 bits (107), Expect(2) = 9e-45
Identities = 23/58 (39%), Positives = 29/58 (50%)
Frame = +1
Query: 964 KKGPRAWFDRFSTFLLKYGFLYSLADPSLFVFYCXXXXXXXXXXXXXXXXTGLDSQLL 1137
K+ PRAWFD S +LL +GF S +DPSLF ++ TG D LL
Sbjct: 1036 KQAPRAWFDTISNYLLDFGFSCSKSDPSLFTYHKNGKTLVLLLYVDDILLTGSDHNLL 1093
>emb|CAA19715.1| putative protein [Arabidopsis thaliana] gi|7269574|emb|CAB79576.1|
putative protein [Arabidopsis thaliana]
Length = 1318
Score = 155 bits (391), Expect(2) = 1e-44
Identities = 80/172 (46%), Positives = 110/172 (63%)
Frame = +3
Query: 453 IYKPNRKYALLATGSDIPRISKSIKSALRHDGWKCAMDEEMQALHQNQTWSLVPRDSSMH 632
I KPN +Y L+ P K++ +AL+H GW AM EE+ + QTWSLVP S MH
Sbjct: 695 ISKPNPRYVFLSHKVSYPE-PKTVTAALKHPGWTGAMTEEIGNCSETQTWSLVPYKSDMH 753
Query: 633 VIGCKWVLKPKLKPNGSLDRLKARLVAKRYRQIYGVD*TGTFLLVIKFGTIRLAFSLALV 812
V+G KWV + KL +G+L++LKAR+VAK + Q G+D T+ V++ T+RL LA
Sbjct: 754 VLGSKWVFRTKLHADGTLNKLKARIVAKGFLQEEGIDYLETYSPVVRTPTVRLVLHLATA 813
Query: 813 SH*DIRQLDV*NSFLHGVLIEDIYMEQSPGMTDPKFPNHVCKLQ*TLYGLKK 968
+ DI+Q+DV N+FLHG L E +YM Q G DP P+HVC L ++YGLK+
Sbjct: 814 LNWDIKQMDVKNAFLHGDLKETVYMTQPAGFVDPSKPDHVCLLHKSIYGLKQ 865
Score = 53.1 bits (126), Expect(2) = 1e-44
Identities = 21/32 (65%), Positives = 28/32 (87%)
Frame = +1
Query: 964 KKGPRAWFDRFSTFLLKYGFLYSLADPSLFVF 1059
K+ PRAWFD+FSTFLL++GF S +DPSLF++
Sbjct: 864 KQSPRAWFDKFSTFLLEFGFFCSKSDPSLFIY 895
>emb|CAC37623.1| copia-like polyprotein [Arabidopsis thaliana]
Length = 1466
Score = 160 bits (404), Expect(2) = 2e-44
Identities = 81/175 (46%), Positives = 111/175 (63%)
Frame = +3
Query: 444 QDAIYKPNRKYALLATGSDIPRISKSIKSALRHDGWKCAMDEEMQALHQNQTWSLVPRDS 623
+D I KPN +YAL+ + S K+I +A++H W A+ +E+ +H TWSLVP
Sbjct: 856 KDGIQKPNPRYALIVSKSSFDE-PKTITTAMKHPSWNAAVMDEIDRIHMLNTWSLVPATE 914
Query: 624 SMHVIGCKWVLKPKLKPNGSLDRLKARLVAKRYRQIYGVD*TGTFLLVIKFGTIRLAFSL 803
M+++ KWV K KLKP+G++D+LKARLVAK + Q GVD TF V++ TIRL
Sbjct: 915 DMNILTSKWVFKTKLKPDGTIDKLKARLVAKGFDQEEGVDYLETFSPVVRTATIRLVLDT 974
Query: 804 ALVSH*DIRQLDV*NSFLHGVLIEDIYMEQSPGMTDPKFPNHVCKLQ*TLYGLKK 968
A + ++QLDV N+FLHG L E ++M Q G DP PNHVC+L LYGLK+
Sbjct: 975 ATANEWPLKQLDVSNAFLHGELQEPVFMFQPSGFVDPNKPNHVCRLTKALYGLKQ 1029
Score = 47.8 bits (112), Expect(2) = 2e-44
Identities = 21/31 (67%), Positives = 24/31 (77%)
Frame = +1
Query: 964 KKGPRAWFDRFSTFLLKYGFLYSLADPSLFV 1056
K+ PRAWFD FS FLL +GF S +DPSLFV
Sbjct: 1028 KQAPRAWFDTFSNFLLDFGFECSTSDPSLFV 1058
>emb|CAN71553.1| hypothetical protein VITISV_034738 [Vitis vinifera]
Length = 1312
Score = 164 bits (414), Expect(2) = 3e-44
Identities = 83/151 (54%), Positives = 107/151 (70%)
Frame = +3
Query: 516 KSIKSALRHDGWKCAMDEEMQALHQNQTWSLVPRDSSMHVIGCKWVLKPKLKPNGSLDRL 695
+++K AL+ WK AM++E QAL +NQTWSLVP S+ +IGCKWV K K KPNGS+DR
Sbjct: 800 RTVKQALQDPNWKVAMEQEYQALLKNQTWSLVPPPSNAKIIGCKWVFKLKHKPNGSIDRY 859
Query: 696 KARLVAKRYRQIYGVD*TGTFLLVIKFGTIRLAFSLALVSH*DIRQLDV*NSFLHGVLIE 875
KARLVA+ + Q YG+D TF V+K TIRL S+A+ S+ I+QLDV N+FL+G L E
Sbjct: 860 KARLVAQGFHQTYGIDFFETFSPVVKPCTIRLVLSIAVSSNWPIKQLDVHNAFLNGDLQE 919
Query: 876 DIYMEQSPGMTDPKFPNHVCKLQ*TLYGLKK 968
++M Q PG D P HVC+LQ LYGLK+
Sbjct: 920 QVFMMQPPGFEDNSCPTHVCRLQKALYGLKQ 950
Score = 42.7 bits (99), Expect(2) = 3e-44
Identities = 19/33 (57%), Positives = 24/33 (72%)
Frame = +1
Query: 964 KKGPRAWFDRFSTFLLKYGFLYSLADPSLFVFY 1062
K+ PRAWF + S+FLL+ GF S AD SLF F+
Sbjct: 949 KQAPRAWFHKLSSFLLQIGFQCSRADASLFYFH 981
>emb|CAN72527.1| hypothetical protein VITISV_009255 [Vitis vinifera]
Length = 1095
Score = 157 bits (397), Expect(2) = 3e-44
Identities = 81/165 (49%), Positives = 108/165 (65%)
Frame = +3
Query: 474 YALLATGSDIPRISKSIKSALRHDGWKCAMDEEMQALHQNQTWSLVPRDSSMHVIGCKWV 653
+ALLAT K KSA ++ W MD+E++AL N TW LVPR S+ +++G KWV
Sbjct: 573 HALLATFEP-----KGFKSAAKNPAWLATMDDEIKALQTNHTWDLVPRPSNTNIVGSKWV 627
Query: 654 LKPKLKPNGSLDRLKARLVAKRYRQIYGVD*TGTFLLVIKFGTIRLAFSLALVSH*DIRQ 833
+ K +GS++R KARLVAK Y Q+ G+D TF V+K T+R+ SLA+ +RQ
Sbjct: 628 FRTKFLSDGSIERFKARLVAKGYTQLPGLDYKDTFSPVVKASTVRVVLSLAVSHKWPLRQ 687
Query: 834 LDV*NSFLHGVLIEDIYMEQSPGMTDPKFPNHVCKLQ*TLYGLKK 968
LDV N FL+G+L E +YMEQ PG DP+ P HVCKL+ LYGLK+
Sbjct: 688 LDVKNVFLNGILHETVYMEQPPGYVDPRHPLHVCKLKKALYGLKQ 732
Score = 49.3 bits (116), Expect(2) = 3e-44
Identities = 22/32 (68%), Positives = 25/32 (78%)
Frame = +1
Query: 964 KKGPRAWFDRFSTFLLKYGFLYSLADPSLFVF 1059
K+ PRAWF RFS+FLLK GF + AD SLFVF
Sbjct: 731 KQAPRAWFQRFSSFLLKLGFFCNCADTSLFVF 762
>gb|AAD21687.1| Strong similarity to gi|3600044 T12H20.12 protease homolog from
Arabidopsis thaliana BAC gb|AF080119 and is a member of
the reverse transcriptase family PF|00078 [Arabidopsis
thaliana]
Length = 1415
Score = 153 bits (387), Expect(2) = 7e-44
Identities = 79/172 (45%), Positives = 109/172 (63%)
Frame = +3
Query: 453 IYKPNRKYALLATGSDIPRISKSIKSALRHDGWKCAMDEEMQALHQNQTWSLVPRDSSMH 632
I KPN +YAL+ + + K++ SA++H GW A+ EE+ +H TWSLVP M+
Sbjct: 841 IQKPNTRYALITSRMNTAE-PKTLASAMKHPGWNEAVHEEINRVHMLHTWSLVPPTDDMN 899
Query: 633 VIGCKWVLKPKLKPNGSLDRLKARLVAKRYRQIYGVD*TGTFLLVIKFGTIRLAFSLALV 812
++ KWV K KL P+GS+D+LKARLVAK + Q GVD TF V++ TIRL ++
Sbjct: 900 ILSSKWVFKTKLHPDGSIDKLKARLVAKGFDQEEGVDYLETFSPVVRTATIRLVLDVSTS 959
Query: 813 SH*DIRQLDV*NSFLHGVLIEDIYMEQSPGMTDPKFPNHVCKLQ*TLYGLKK 968
I+QLDV N+FLHG L E ++M Q G DP+ P HVC+L +YGLK+
Sbjct: 960 KGWPIKQLDVSNAFLHGELQEPVFMYQPSGFIDPQKPTHVCRLTKAIYGLKQ 1011
Score = 52.0 bits (123), Expect(2) = 7e-44
Identities = 27/58 (46%), Positives = 31/58 (53%)
Frame = +1
Query: 964 KKGPRAWFDRFSTFLLKYGFLYSLADPSLFVFYCXXXXXXXXXXXXXXXXTGLDSQLL 1137
K+ PRAWFD FS FLL YGF+ S +DPSLFV + TG D LL
Sbjct: 1010 KQAPRAWFDTFSNFLLDYGFVCSKSDPSLFVCHQDGKILYLLLYVDDILLTGSDQSLL 1067
>emb|CAN67588.1| hypothetical protein VITISV_036280 [Vitis vinifera]
Length = 1379
Score = 154 bits (390), Expect(2) = 1e-43
Identities = 80/165 (48%), Positives = 108/165 (65%)
Frame = +3
Query: 474 YALLATGSDIPRISKSIKSALRHDGWKCAMDEEMQALHQNQTWSLVPRDSSMHVIGCKWV 653
+ALLAT K KSA ++ W AMD++++AL N TW LVPR S+ +++G KWV
Sbjct: 270 HALLATSEP-----KGFKSAAKNPAWLAAMDDKIKALQTNHTWDLVPRPSNTNIVGSKWV 324
Query: 654 LKPKLKPNGSLDRLKARLVAKRYRQIYGVD*TGTFLLVIKFGTIRLAFSLALVSH*DIRQ 833
+ K GS++R KARLVAK Y Q+ G+D TF V+K T+R+ SLA+ +RQ
Sbjct: 325 FRTKFLSYGSIERFKARLVAKGYTQLPGLDYKDTFSPVVKASTVRVVLSLAVSHKWPLRQ 384
Query: 834 LDV*NSFLHGVLIEDIYMEQSPGMTDPKFPNHVCKLQ*TLYGLKK 968
LDV N+FL+G+L E +YMEQ G DP+ P HVCKL+ LYGLK+
Sbjct: 385 LDVKNAFLNGILHETVYMEQPLGYVDPRHPLHVCKLKKALYGLKQ 429
Score = 50.1 bits (118), Expect(2) = 1e-43
Identities = 23/32 (71%), Positives = 25/32 (78%)
Frame = +1
Query: 964 KKGPRAWFDRFSTFLLKYGFLYSLADPSLFVF 1059
K+ PRAWF RFS+FLLK GF S AD SLFVF
Sbjct: 428 KQAPRAWFQRFSSFLLKLGFFCSRADTSLFVF 459
>emb|CAN75478.1| hypothetical protein VITISV_020209 [Vitis vinifera]
Length = 1074
Score = 159 bits (403), Expect(2) = 5e-43
Identities = 81/151 (53%), Positives = 105/151 (69%)
Frame = +3
Query: 516 KSIKSALRHDGWKCAMDEEMQALHQNQTWSLVPRDSSMHVIGCKWVLKPKLKPNGSLDRL 695
+++K L+ WK AM++E QAL +NQTWSLVP S+ +I CKWV K K KPNGS+DR
Sbjct: 546 RTVKQTLQDPNWKLAMEQEYQALLKNQTWSLVPPPSNAKIIRCKWVFKLKHKPNGSIDRY 605
Query: 696 KARLVAKRYRQIYGVD*TGTFLLVIKFGTIRLAFSLALVSH*DIRQLDV*NSFLHGVLIE 875
KARLVA+ + Q YG+D TF V+K TIRL S+A+ S+ I+QLDV N+FL+G L E
Sbjct: 606 KARLVAQGFHQTYGIDFFETFSPVVKPCTIRLVLSIAVSSNWPIKQLDVHNAFLNGDLQE 665
Query: 876 DIYMEQSPGMTDPKFPNHVCKLQ*TLYGLKK 968
++M Q PG D P HVC+LQ LYGLK+
Sbjct: 666 QVFMMQPPGFEDSSCPTHVCRLQKALYGLKQ 696
Score = 43.1 bits (100), Expect(2) = 5e-43
Identities = 19/33 (57%), Positives = 25/33 (75%)
Frame = +1
Query: 964 KKGPRAWFDRFSTFLLKYGFLYSLADPSLFVFY 1062
K+GPRAWF + S+FLL+ GF S A+ SLF F+
Sbjct: 695 KQGPRAWFHKLSSFLLQIGFQCSRANASLFYFH 727
>emb|CAN64816.1| hypothetical protein VITISV_010668 [Vitis vinifera]
Length = 1212
Score = 154 bits (388), Expect(2) = 3e-42
Identities = 74/148 (50%), Positives = 105/148 (70%)
Frame = +3
Query: 525 KSALRHDGWKCAMDEEMQALHQNQTWSLVPRDSSMHVIGCKWVLKPKLKPNGSLDRLKAR 704
K A +H W AMD+E+QAL N TW LVP ++ +++G +W+ K KL+ +GS++ KAR
Sbjct: 738 KPATKHPEWLSAMDDEIQALKTNDTWVLVPCPTNHNMVGYRWIFKTKLQLDGSIEHHKAR 797
Query: 705 LVAKRYRQIYGVD*TGTFLLVIKFGTIRLAFSLALVSH*DIRQLDV*NSFLHGVLIEDIY 884
LVA+ + QI+G+D TF V++ TIR+ SLA+ S + QLDV N+FLHG L E++Y
Sbjct: 798 LVAQGFSQIHGLDFGDTFSPVVRLATIRIILSLAITSGWRLHQLDVKNAFLHGFLNEEVY 857
Query: 885 MEQSPGMTDPKFPNHVCKLQ*TLYGLKK 968
MEQ PG T+P+FP HVC+L+ LYGLK+
Sbjct: 858 MEQPPGYTNPQFPQHVCRLKRALYGLKQ 885
Score = 46.2 bits (108), Expect(2) = 3e-42
Identities = 20/33 (60%), Positives = 25/33 (75%)
Frame = +1
Query: 964 KKGPRAWFDRFSTFLLKYGFLYSLADPSLFVFY 1062
K+ PRAWF RFS+FLLK GF + D SLFV++
Sbjct: 884 KQAPRAWFHRFSSFLLKLGFFSNQXDSSLFVYH 916
>gb|AAR88589.1| putative copia-like retrotransposon protein [Oryza sativa Japonica
Group]
Length = 1399
Score = 160 bits (405), Expect(2) = 1e-41
Identities = 89/181 (49%), Positives = 115/181 (63%)
Frame = +3
Query: 426 TPWSLPQDAIYKPNRKYALLATGSDIPRISKSIKSALRHDGWKCAMDEEMQALHQNQTWS 605
T ++P+ A+ P R L +G R KS++ A+ + WK AMD E AL +N+TW
Sbjct: 860 TDQAMPEAAV-APIRPKTRLQSGI---RKEKSLEEAVNNKHWKEAMDAEYMALIENKTWH 915
Query: 606 LVPRDSSMHVIGCKWVLKPKLKPNGSLDRLKARLVAKRYRQIYGVD*TGTFLLVIKFGTI 785
LVP +VI CKWV K K K +GSLDR KARLVAK ++Q YG+D TF V+K TI
Sbjct: 916 LVPPQKGRNVIDCKWVYKVKRKADGSLDRYKARLVAKGFKQRYGIDYEDTFSPVVKAATI 975
Query: 786 RLAFSLALVSH*DIRQLDV*NSFLHGVLIEDIYMEQSPGMTDPKFPNHVCKLQ*TLYGLK 965
R+ SLA+ +RQLDV N+FLHGVL E++YM+Q PG PN+VCKL LYGLK
Sbjct: 976 RIVLSLAVSRGWSLRQLDVKNAFLHGVLEEEVYMKQPPGYEKKSMPNYVCKLDKALYGLK 1035
Query: 966 K 968
+
Sbjct: 1036 Q 1036
Score = 37.7 bits (86), Expect(2) = 1e-41
Identities = 17/32 (53%), Positives = 22/32 (68%)
Frame = +1
Query: 964 KKGPRAWFDRFSTFLLKYGFLYSLADPSLFVF 1059
K+ PRAW+ R ST L + GF+ S AD SLF +
Sbjct: 1035 KQAPRAWYSRLSTKLSELGFVPSKADTSLFFY 1066