BLASTX nr result

ID: Catharanthus22_contig00016920 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00016920
         (443 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006352297.1| PREDICTED: uncharacterized protein LOC102601...    37   5e-07
ref|XP_004301988.1| PREDICTED: uncharacterized protein LOC101296...    42   6e-06
ref|XP_004309358.1| PREDICTED: uncharacterized protein LOC101302...    44   8e-06

>ref|XP_006352297.1| PREDICTED: uncharacterized protein LOC102601614 [Solanum tuberosum]
          Length = 376

 Score = 37.4 bits (85), Expect(3) = 5e-07
 Identities = 24/74 (32%), Positives = 37/74 (50%)
 Frame = +2

Query: 11  ETPLVEGDDTYSVFSTTMELLCVKSENQYTQKSYDGDCAYNKKYFLLANNAVENCYTA*K 190
           + PL  G + YS  S  + ++ +KSE   +   ++      K+   L N    + Y A K
Sbjct: 167 QNPLWHGCE-YSELSVAVRMMSIKSEYNMSHSCFNAMAQLMKETSSLDNKIPLDYYRAKK 225

Query: 191 LISGLGLSVQKE*C 232
           L+SGLGL+ QK  C
Sbjct: 226 LVSGLGLTSQKIDC 239



 Score = 32.7 bits (73), Expect(3) = 5e-07
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = +3

Query: 219 KRSDVCVNDCILNWKEYTERMECKFCGSHLY 311
           ++ D CVN C+L +K   +  ECKFC    Y
Sbjct: 235 QKIDCCVNGCMLYYKADKQMTECKFCKEPRY 265



 Score = 28.1 bits (61), Expect(3) = 5e-07
 Identities = 10/14 (71%), Positives = 13/14 (92%)
 Frame = +2

Query: 401 RLHASKKTVEHMRW 442
           RL+ASK++ EHMRW
Sbjct: 293 RLYASKRSAEHMRW 306


>ref|XP_004301988.1| PREDICTED: uncharacterized protein LOC101296874 [Fragaria vesca
           subsp. vesca]
          Length = 286

 Score = 42.4 bits (98), Expect(2) = 6e-06
 Identities = 24/72 (33%), Positives = 39/72 (54%)
 Frame = +2

Query: 8   VETPLVEGDDTYSVFSTTMELLCVKSENQYTQKSYDGDCAYNKKYFLLANNAVENCYTA* 187
           V+TPL  G + ++V    ME + +K++   T+  +D D A  KK     N+  EN     
Sbjct: 50  VQTPLYPGSE-HTVLGIAMEQMHIKNKQGKTKTCFDADIALMKKVLPKGNSCPENFDQVK 108

Query: 188 KLISGLGLSVQK 223
           ++++GLGL  QK
Sbjct: 109 RMLAGLGLDHQK 120



 Score = 33.1 bits (74), Expect(2) = 6e-06
 Identities = 10/26 (38%), Positives = 19/26 (73%)
 Frame = +3

Query: 219 KRSDVCVNDCILNWKEYTERMECKFC 296
           ++ D CVN+C+L +K+  + +EC +C
Sbjct: 119 QKIDACVNNCLLYYKDNKDEVECPYC 144


>ref|XP_004309358.1| PREDICTED: uncharacterized protein LOC101302513 [Fragaria vesca
           subsp. vesca]
          Length = 271

 Score = 43.9 bits (102), Expect(2) = 8e-06
 Identities = 24/72 (33%), Positives = 40/72 (55%)
 Frame = +2

Query: 8   VETPLVEGDDTYSVFSTTMELLCVKSENQYTQKSYDGDCAYNKKYFLLANNAVENCYTA* 187
           V+TPL  G + ++V    ME + +K++   T+  +D D A  KK   + N+  EN     
Sbjct: 50  VQTPLYPGSE-HTVLGIAMEQMQIKNKQGKTKTCFDADIALMKKVLPIGNSCPENFDQVK 108

Query: 188 KLISGLGLSVQK 223
           ++++GLGL  QK
Sbjct: 109 RMLAGLGLDHQK 120



 Score = 31.2 bits (69), Expect(2) = 8e-06
 Identities = 10/26 (38%), Positives = 18/26 (69%)
 Frame = +3

Query: 219 KRSDVCVNDCILNWKEYTERMECKFC 296
           ++ D CVN+C L +K+  +++EC  C
Sbjct: 119 QKIDACVNNCFLYYKDNKDQVECPHC 144


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