BLASTX nr result
ID: Catharanthus22_contig00016819
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00016819
(305 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AHH30482.1| hypothetical chloroplast RF2 (chloroplast) [Barts... 72 8e-11
ref|YP_004841827.1| hypothetical chloroplast RF21 [Cucumis melo ... 71 2e-10
ref|YP_008592532.1| Ycf2 (chloroplast) [Andrographis paniculata]... 70 3e-10
ref|YP_008999976.1| hypothetical chloroplast RF21 (chloroplast) ... 69 5e-10
sp|Q589A6.1|YCF2_SILLA RecName: Full=Protein Ycf2 gi|62149329|db... 69 6e-10
gb|AFU96445.1| Ycf2, partial (chloroplast) [Casearia nitida] 69 6e-10
ref|YP_005089618.1| ycf2 gene product (chloroplast) [Silene lati... 69 6e-10
ref|YP_008081309.1| hypothetical chloroplast RF2 (chloroplast) [... 68 1e-09
ref|NP_862797.1| Ycf2 [Calycanthus floridus var. glaucus] gi|324... 68 1e-09
gb|ADD30887.1| putative RF2 protein [Nerium oleander] gi|3408071... 68 1e-09
ref|YP_740245.1| hypothetical chloroplast RF2 [Liriodendron tuli... 68 1e-09
ref|YP_005089375.1| ycf2 gene product (chloroplast) [Silene vulg... 67 3e-09
ref|YP_008815998.1| Ycf2 (chloroplast) [Lindenbergia philippensi... 66 4e-09
ref|YP_008815981.1| Ycf2 (chloroplast) [Lindenbergia philippensi... 66 4e-09
sp|Q2QD30.1|YCF2_CUCSA RecName: Full=Protein Ycf2 gi|74027143|gb... 66 4e-09
gb|AFU96466.1| Ycf2, partial (chloroplast) [Medusagyne oppositif... 66 4e-09
ref|YP_247661.1| Ycf2 [Cucumis sativus] gi|67511460|emb|CAJ00820... 66 4e-09
ref|YP_247643.1| Ycf2 [Cucumis sativus] gi|67511442|emb|CAJ00802... 66 4e-09
gb|AHH92807.1| ycf2 protein, partial (chloroplast) [Chenopodium ... 66 5e-09
gb|AHH92806.1| ycf2 protein, partial (chloroplast) [Chenopodium ... 66 5e-09
>gb|AHH30482.1| hypothetical chloroplast RF2 (chloroplast) [Bartsia inaequalis]
gi|576598331|gb|AHH30493.1| hypothetical chloroplast RF2
(chloroplast) [Bartsia inaequalis]
Length = 2269
Score = 72.0 bits (175), Expect = 8e-11
Identities = 33/39 (84%), Positives = 35/39 (89%)
Frame = +3
Query: 189 MKENQFKC*IFELREIKNSHYFLDSWTQFNSVGFFLHIF 305
MKE+ FK IFELREIKNSHYFLDSWTQFNSVG F+HIF
Sbjct: 1 MKEHPFKSWIFELREIKNSHYFLDSWTQFNSVGSFIHIF 39
>ref|YP_004841827.1| hypothetical chloroplast RF21 [Cucumis melo subsp. melo]
gi|346578256|ref|YP_004841847.1| hypothetical
chloroplast RF21 [Cucumis melo subsp. melo]
gi|344030535|gb|AEM76936.1| hypothetical chloroplast
RF21 [Cucumis melo subsp. melo]
gi|344030556|gb|AEM76957.1| hypothetical chloroplast
RF21 [Cucumis melo subsp. melo]
Length = 2287
Score = 70.9 bits (172), Expect = 2e-10
Identities = 32/39 (82%), Positives = 34/39 (87%)
Frame = +3
Query: 189 MKENQFKC*IFELREIKNSHYFLDSWTQFNSVGFFLHIF 305
MKE QFK IFELREIKNSHYFLDSW QFNS+G F+HIF
Sbjct: 1 MKEQQFKSWIFELREIKNSHYFLDSWNQFNSLGSFIHIF 39
>ref|YP_008592532.1| Ycf2 (chloroplast) [Andrographis paniculata]
gi|552541366|ref|YP_008592551.1| Ycf2 (chloroplast)
[Andrographis paniculata] gi|532164880|gb|AGT79890.1|
Ycf2 (chloroplast) [Andrographis paniculata]
gi|532164899|gb|AGT79909.1| Ycf2 (chloroplast)
[Andrographis paniculata]
Length = 2256
Score = 70.1 bits (170), Expect = 3e-10
Identities = 32/39 (82%), Positives = 35/39 (89%)
Frame = +3
Query: 189 MKENQFKC*IFELREIKNSHYFLDSWTQFNSVGFFLHIF 305
MK +QFK IFELREIKNSHYFLDSWT+FNSVG F+HIF
Sbjct: 1 MKGHQFKSWIFELREIKNSHYFLDSWTRFNSVGSFIHIF 39
>ref|YP_008999976.1| hypothetical chloroplast RF21 (chloroplast) [Agrostemma githago]
gi|576303675|ref|YP_008999993.1| hypothetical
chloroplast RF21 (chloroplast) [Agrostemma githago]
gi|555944063|gb|AGZ17967.1| hypothetical chloroplast
RF21 (chloroplast) [Agrostemma githago]
gi|555944080|gb|AGZ17984.1| hypothetical chloroplast
RF21 (chloroplast) [Agrostemma githago]
Length = 2043
Score = 69.3 bits (168), Expect = 5e-10
Identities = 32/39 (82%), Positives = 34/39 (87%)
Frame = +3
Query: 189 MKENQFKC*IFELREIKNSHYFLDSWTQFNSVGFFLHIF 305
MK +QFK IFELREIKNSHYF DSWTQFNSVG F+HIF
Sbjct: 1 MKGHQFKSWIFELREIKNSHYFSDSWTQFNSVGSFIHIF 39
>sp|Q589A6.1|YCF2_SILLA RecName: Full=Protein Ycf2 gi|62149329|dbj|BAD93471.1| ycf2 protein
[Silene latifolia]
Length = 2223
Score = 68.9 bits (167), Expect = 6e-10
Identities = 32/39 (82%), Positives = 34/39 (87%)
Frame = +3
Query: 189 MKENQFKC*IFELREIKNSHYFLDSWTQFNSVGFFLHIF 305
MK +QFK IFELREIKNSHYF DSWTQFNSVG F+HIF
Sbjct: 1 MKGHQFKFWIFELREIKNSHYFSDSWTQFNSVGSFIHIF 39
>gb|AFU96445.1| Ycf2, partial (chloroplast) [Casearia nitida]
Length = 2559
Score = 68.9 bits (167), Expect = 6e-10
Identities = 34/43 (79%), Positives = 36/43 (83%), Gaps = 4/43 (9%)
Frame = +3
Query: 189 MKENQFKC*IFELREI----KNSHYFLDSWTQFNSVGFFLHIF 305
MK +QFK IFELREI KNSHYFLDSWTQFNSVGFF+HIF
Sbjct: 1 MKGHQFKSWIFELREILREIKNSHYFLDSWTQFNSVGFFIHIF 43
>ref|YP_005089618.1| ycf2 gene product (chloroplast) [Silene latifolia]
gi|374250009|ref|YP_005089635.1| ycf2 gene product
(chloroplast) [Silene latifolia]
gi|329755563|gb|AEC04126.1| hypothetical chloroplast
RF21 (chloroplast) [Silene latifolia]
gi|329755580|gb|AEC04143.1| hypothetical chloroplast
RF21 (chloroplast) [Silene latifolia]
Length = 2223
Score = 68.9 bits (167), Expect = 6e-10
Identities = 32/39 (82%), Positives = 34/39 (87%)
Frame = +3
Query: 189 MKENQFKC*IFELREIKNSHYFLDSWTQFNSVGFFLHIF 305
MK +QFK IFELREIKNSHYF DSWTQFNSVG F+HIF
Sbjct: 1 MKGHQFKFWIFELREIKNSHYFSDSWTQFNSVGSFIHIF 39
>ref|YP_008081309.1| hypothetical chloroplast RF2 (chloroplast) [Catharanthus roseus]
gi|511348399|ref|YP_008081328.1| hypothetical
chloroplast RF2 (chloroplast) [Catharanthus roseus]
gi|474452120|gb|AGI51188.1| hypothetical chloroplast RF2
(chloroplast) [Catharanthus roseus]
gi|474452139|gb|AGI51207.1| hypothetical chloroplast RF2
(chloroplast) [Catharanthus roseus]
Length = 2273
Score = 67.8 bits (164), Expect = 1e-09
Identities = 34/43 (79%), Positives = 35/43 (81%), Gaps = 4/43 (9%)
Frame = +3
Query: 189 MKENQFKC*IFELREI----KNSHYFLDSWTQFNSVGFFLHIF 305
MK NQFK IFELREI KNSHYFLDSWTQFNSVG F+HIF
Sbjct: 1 MKGNQFKSWIFELREILREIKNSHYFLDSWTQFNSVGSFIHIF 43
>ref|NP_862797.1| Ycf2 [Calycanthus floridus var. glaucus]
gi|32480909|ref|NP_862818.1| Ycf2 [Calycanthus floridus
var. glaucus] gi|47117498|sp|Q7Y667.1|YCF2_CALFG
RecName: Full=Protein Ycf2 gi|32399422|emb|CAD28764.1|
Ycf2 protein [Calycanthus floridus var. glaucus]
gi|32399445|emb|CAD28786.1| Ycf2 protein [Calycanthus
floridus var. glaucus]
Length = 2287
Score = 67.8 bits (164), Expect = 1e-09
Identities = 31/39 (79%), Positives = 34/39 (87%)
Frame = +3
Query: 189 MKENQFKC*IFELREIKNSHYFLDSWTQFNSVGFFLHIF 305
MK +QFK IFELREIKNSHYFLDSWT+F+SVG F HIF
Sbjct: 1 MKRHQFKSWIFELREIKNSHYFLDSWTKFDSVGSFTHIF 39
>gb|ADD30887.1| putative RF2 protein [Nerium oleander] gi|340807172|gb|AEK71765.1|
hypothetical chloroplast RF2 [Nerium oleander]
Length = 2278
Score = 67.8 bits (164), Expect = 1e-09
Identities = 34/43 (79%), Positives = 35/43 (81%), Gaps = 4/43 (9%)
Frame = +3
Query: 189 MKENQFKC*IFELREI----KNSHYFLDSWTQFNSVGFFLHIF 305
MK NQFK IFELREI KNSHYFLDSWTQFNSVG F+HIF
Sbjct: 1 MKGNQFKSWIFELREILREIKNSHYFLDSWTQFNSVGSFIHIF 43
>ref|YP_740245.1| hypothetical chloroplast RF2 [Liriodendron tulipifera]
gi|114107109|ref|YP_740264.1| hypothetical chloroplast
RF2 [Liriodendron tulipifera]
gi|122246286|sp|Q0G9F7.1|YCF2_LIRTU RecName:
Full=Protein Ycf2 gi|113201037|gb|ABI32552.1|
hypothetical chloroplast RF2 [Liriodendron tulipifera]
gi|113201057|gb|ABI32572.1| hypothetical chloroplast RF2
[Liriodendron tulipifera]
Length = 2292
Score = 67.8 bits (164), Expect = 1e-09
Identities = 31/39 (79%), Positives = 34/39 (87%)
Frame = +3
Query: 189 MKENQFKC*IFELREIKNSHYFLDSWTQFNSVGFFLHIF 305
MK +QFK IFELREIKNSHYFLDSWT+F+SVG F HIF
Sbjct: 1 MKRHQFKSWIFELREIKNSHYFLDSWTKFDSVGSFTHIF 39
>ref|YP_005089375.1| ycf2 gene product (chloroplast) [Silene vulgaris]
gi|374249763|ref|YP_005089392.1| ycf2 gene product
(chloroplast) [Silene vulgaris]
gi|329755728|gb|AEC04289.1| hypothetical chloroplast
RF21 (chloroplast) [Silene vulgaris]
gi|329755745|gb|AEC04306.1| hypothetical chloroplast
RF21 (chloroplast) [Silene vulgaris]
Length = 2224
Score = 66.6 bits (161), Expect = 3e-09
Identities = 31/39 (79%), Positives = 33/39 (84%)
Frame = +3
Query: 189 MKENQFKC*IFELREIKNSHYFLDSWTQFNSVGFFLHIF 305
MK +QFK IFELREIKNSHYF DSWTQFNSVG F+H F
Sbjct: 1 MKGHQFKFWIFELREIKNSHYFSDSWTQFNSVGSFIHSF 39
>ref|YP_008815998.1| Ycf2 (chloroplast) [Lindenbergia philippensis]
gi|557136925|emb|CDI43979.1| Ycf2 (chloroplast)
[Lindenbergia philippensis]
Length = 2274
Score = 66.2 bits (160), Expect = 4e-09
Identities = 33/43 (76%), Positives = 35/43 (81%), Gaps = 4/43 (9%)
Frame = +3
Query: 189 MKENQFKC*IFELREI----KNSHYFLDSWTQFNSVGFFLHIF 305
MKE+ FK IFELREI KNSHYFLDSWTQFNSVG F+HIF
Sbjct: 1 MKEHPFKSWIFELREILREIKNSHYFLDSWTQFNSVGSFIHIF 43
>ref|YP_008815981.1| Ycf2 (chloroplast) [Lindenbergia philippensis]
gi|557136908|emb|CDI43962.1| Ycf2 (chloroplast)
[Lindenbergia philippensis]
Length = 2274
Score = 66.2 bits (160), Expect = 4e-09
Identities = 33/43 (76%), Positives = 35/43 (81%), Gaps = 4/43 (9%)
Frame = +3
Query: 189 MKENQFKC*IFELREI----KNSHYFLDSWTQFNSVGFFLHIF 305
MKE+ FK IFELREI KNSHYFLDSWTQFNSVG F+HIF
Sbjct: 1 MKEHPFKSWIFELREILREIKNSHYFLDSWTQFNSVGSFIHIF 43
>sp|Q2QD30.1|YCF2_CUCSA RecName: Full=Protein Ycf2 gi|74027143|gb|AAZ94693.1| ycf2 protein
[Cucumis sativus] gi|74027160|gb|AAZ94710.1| ycf2
protein [Cucumis sativus] gi|115432862|gb|ABI97475.1|
hypothetical chloroplast RF2 [Cucumis sativus]
gi|115432865|gb|ABI97478.1| hypothetical chloroplast RF2
[Cucumis sativus] gi|115498347|gb|ABI98789.1|
hypothetical chloroplast RF2 [Cucumis sativus]
gi|115498365|gb|ABI98807.1| hypothetical chloroplast RF2
[Cucumis sativus]
Length = 1988
Score = 66.2 bits (160), Expect = 4e-09
Identities = 30/39 (76%), Positives = 32/39 (82%)
Frame = +3
Query: 189 MKENQFKC*IFELREIKNSHYFLDSWTQFNSVGFFLHIF 305
MK QFK I E REIKNSHYFLDSWTQFNS+G F+HIF
Sbjct: 1 MKGQQFKLWILEFREIKNSHYFLDSWTQFNSLGSFIHIF 39
>gb|AFU96466.1| Ycf2, partial (chloroplast) [Medusagyne oppositifolia]
Length = 2559
Score = 66.2 bits (160), Expect = 4e-09
Identities = 33/43 (76%), Positives = 35/43 (81%), Gaps = 4/43 (9%)
Frame = +3
Query: 189 MKENQFKC*IFELREI----KNSHYFLDSWTQFNSVGFFLHIF 305
MK +QFK IFELREI KNSHYFLDSWTQFNSVG F+HIF
Sbjct: 1 MKAHQFKSWIFELREILREIKNSHYFLDSWTQFNSVGSFIHIF 43
>ref|YP_247661.1| Ycf2 [Cucumis sativus] gi|67511460|emb|CAJ00820.1| ycf2 [Cucumis
sativus]
Length = 1988
Score = 66.2 bits (160), Expect = 4e-09
Identities = 30/39 (76%), Positives = 32/39 (82%)
Frame = +3
Query: 189 MKENQFKC*IFELREIKNSHYFLDSWTQFNSVGFFLHIF 305
MK QFK I E REIKNSHYFLDSWTQFNS+G F+HIF
Sbjct: 1 MKGQQFKLWILEFREIKNSHYFLDSWTQFNSLGSFIHIF 39
>ref|YP_247643.1| Ycf2 [Cucumis sativus] gi|67511442|emb|CAJ00802.1| Ycf2 [Cucumis
sativus]
Length = 1990
Score = 66.2 bits (160), Expect = 4e-09
Identities = 30/39 (76%), Positives = 32/39 (82%)
Frame = +3
Query: 189 MKENQFKC*IFELREIKNSHYFLDSWTQFNSVGFFLHIF 305
MK QFK I E REIKNSHYFLDSWTQFNS+G F+HIF
Sbjct: 1 MKGQQFKLWILEFREIKNSHYFLDSWTQFNSLGSFIHIF 39
>gb|AHH92807.1| ycf2 protein, partial (chloroplast) [Chenopodium album]
Length = 87
Score = 65.9 bits (159), Expect = 5e-09
Identities = 33/43 (76%), Positives = 35/43 (81%), Gaps = 4/43 (9%)
Frame = +3
Query: 189 MKENQFKC*IFELREI----KNSHYFLDSWTQFNSVGFFLHIF 305
MK +QFK IFELREI KNSHYFLDSWTQFNSVG F+HIF
Sbjct: 1 MKGHQFKSWIFELREILREIKNSHYFLDSWTQFNSVGSFIHIF 43
>gb|AHH92806.1| ycf2 protein, partial (chloroplast) [Chenopodium album]
Length = 86
Score = 65.9 bits (159), Expect = 5e-09
Identities = 33/43 (76%), Positives = 35/43 (81%), Gaps = 4/43 (9%)
Frame = +3
Query: 189 MKENQFKC*IFELREI----KNSHYFLDSWTQFNSVGFFLHIF 305
MK +QFK IFELREI KNSHYFLDSWTQFNSVG F+HIF
Sbjct: 1 MKGHQFKSWIFELREILREIKNSHYFLDSWTQFNSVGSFIHIF 43