BLASTX nr result
ID: Catharanthus22_contig00016640
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00016640
(578 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006352928.1| PREDICTED: pentatricopeptide repeat-containi... 133 4e-29
ref|XP_004245945.1| PREDICTED: pentatricopeptide repeat-containi... 130 2e-28
gb|EXC26223.1| hypothetical protein L484_022794 [Morus notabilis] 128 1e-27
ref|XP_002518995.1| GTP-binding protein alpha subunit, gna, put... 125 8e-27
ref|XP_002275784.1| PREDICTED: pentatricopeptide repeat-containi... 122 9e-26
gb|EOY25237.1| Tetratricopeptide repeat-like superfamily protein... 120 3e-25
ref|XP_006432677.1| hypothetical protein CICLE_v10000638mg [Citr... 119 7e-25
ref|XP_004136211.1| PREDICTED: pentatricopeptide repeat-containi... 115 6e-24
gb|EMJ12073.1| hypothetical protein PRUPE_ppa003110mg [Prunus pe... 108 1e-21
gb|ESW30211.1| hypothetical protein PHAVU_002G134100g [Phaseolus... 105 8e-21
ref|XP_006368339.1| pentatricopeptide repeat-containing family p... 103 3e-20
ref|XP_004300183.1| PREDICTED: pentatricopeptide repeat-containi... 102 9e-20
emb|CDL67990.1| putative pentatricopeptide repeat-containing pro... 101 2e-19
ref|XP_006572948.1| PREDICTED: pentatricopeptide repeat-containi... 101 2e-19
ref|XP_006572946.1| PREDICTED: pentatricopeptide repeat-containi... 100 2e-19
ref|XP_004512460.1| PREDICTED: pentatricopeptide repeat-containi... 98 2e-18
ref|XP_003533450.1| PREDICTED: pentatricopeptide repeat-containi... 96 7e-18
gb|AFK43998.1| unknown [Lotus japonicus] 90 5e-16
ref|NP_174474.1| pentatricopeptide repeat-containing protein [Ar... 83 6e-14
dbj|BAE98745.1| hypothetical protein [Arabidopsis thaliana] 83 6e-14
>ref|XP_006352928.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Solanum tuberosum]
Length = 605
Score = 133 bits (334), Expect = 4e-29
Identities = 63/94 (67%), Positives = 77/94 (81%)
Frame = +1
Query: 295 MVGTSVLHQTHFFMPQDDYAKNPEFDFSSKEQECISLIKKCRSLMDFKLVHGQILKLGFL 474
MV TSVL+QT F +P++ +AK EF+FS KEQE IS+IKKC S+ + K VHGQILKLGF+
Sbjct: 1 MVRTSVLYQTPFLIPKEYHAKAQEFNFSLKEQEWISMIKKCNSMRELKQVHGQILKLGFI 60
Query: 475 WSSFCASSLLATCALSDWGSMDYACSIFQNIDDP 576
SSFC+ +LL+TCALS+WGSMDYAC IF IDDP
Sbjct: 61 CSSFCSGNLLSTCALSEWGSMDYACLIFDEIDDP 94
>ref|XP_004245945.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Solanum lycopersicum]
Length = 605
Score = 130 bits (328), Expect = 2e-28
Identities = 62/94 (65%), Positives = 76/94 (80%)
Frame = +1
Query: 295 MVGTSVLHQTHFFMPQDDYAKNPEFDFSSKEQECISLIKKCRSLMDFKLVHGQILKLGFL 474
MV TSVL+QT F +P++ +AK E +FS KEQE IS+IKKC ++ + K VHGQILKLGF+
Sbjct: 1 MVRTSVLYQTPFLIPKEYHAKAQELNFSLKEQEWISMIKKCNNMRELKQVHGQILKLGFI 60
Query: 475 WSSFCASSLLATCALSDWGSMDYACSIFQNIDDP 576
SSFCA +LL+TCALS+WGSMDYAC IF IDDP
Sbjct: 61 CSSFCAGNLLSTCALSEWGSMDYACLIFDEIDDP 94
>gb|EXC26223.1| hypothetical protein L484_022794 [Morus notabilis]
Length = 605
Score = 128 bits (321), Expect = 1e-27
Identities = 56/94 (59%), Positives = 75/94 (79%)
Frame = +1
Query: 295 MVGTSVLHQTHFFMPQDDYAKNPEFDFSSKEQECISLIKKCRSLMDFKLVHGQILKLGFL 474
M GTSVL+QTH +P + ++PEF S KEQEC+SL+K+C+S+ + K +H QILK+G L
Sbjct: 1 MTGTSVLNQTHLLLPAKEPIQSPEFHLSLKEQECLSLLKRCKSVRELKQIHVQILKIGLL 60
Query: 475 WSSFCASSLLATCALSDWGSMDYACSIFQNIDDP 576
SFCA +L+ATCALSDWGSMDYACSIF+++ +P
Sbjct: 61 GDSFCAGNLVATCALSDWGSMDYACSIFRHVKEP 94
>ref|XP_002518995.1| GTP-binding protein alpha subunit, gna, putative [Ricinus communis]
gi|223541982|gb|EEF43528.1| GTP-binding protein alpha
subunit, gna, putative [Ricinus communis]
Length = 1203
Score = 125 bits (314), Expect = 8e-27
Identities = 54/94 (57%), Positives = 73/94 (77%)
Frame = +1
Query: 295 MVGTSVLHQTHFFMPQDDYAKNPEFDFSSKEQECISLIKKCRSLMDFKLVHGQILKLGFL 474
M+GT+VLHQ H +P +D +++PE KEQEC+SL+K+C+++ +F+ H QILK GF
Sbjct: 862 MIGTTVLHQIHILLPPEDPSESPEVSLRVKEQECLSLLKRCQNMEEFRQAHAQILKWGFF 921
Query: 475 WSSFCASSLLATCALSDWGSMDYACSIFQNIDDP 576
+ FCAS+L+ATCALS WGSMDYACSIF+ ID P
Sbjct: 922 SNPFCASNLVATCALSHWGSMDYACSIFRQIDQP 955
>ref|XP_002275784.1| PREDICTED: pentatricopeptide repeat-containing protein At1g31920
[Vitis vinifera] gi|297742017|emb|CBI33804.3| unnamed
protein product [Vitis vinifera]
Length = 605
Score = 122 bits (305), Expect = 9e-26
Identities = 54/93 (58%), Positives = 72/93 (77%)
Frame = +1
Query: 295 MVGTSVLHQTHFFMPQDDYAKNPEFDFSSKEQECISLIKKCRSLMDFKLVHGQILKLGFL 474
M+ TSVLHQTH + ++D ++PE F E+EC+SL+KKC ++ +FK H +ILKLG
Sbjct: 1 MIRTSVLHQTHVLVSREDPPQSPELSFKLGEKECVSLLKKCSNMEEFKQSHARILKLGLF 60
Query: 475 WSSFCASSLLATCALSDWGSMDYACSIFQNIDD 573
SFCAS+L+ATCALSDWGSMDYACSIF+ +D+
Sbjct: 61 GDSFCASNLVATCALSDWGSMDYACSIFRQMDE 93
>gb|EOY25237.1| Tetratricopeptide repeat-like superfamily protein [Theobroma cacao]
Length = 703
Score = 120 bits (300), Expect = 3e-25
Identities = 55/97 (56%), Positives = 71/97 (73%)
Frame = +1
Query: 286 EGRMVGTSVLHQTHFFMPQDDYAKNPEFDFSSKEQECISLIKKCRSLMDFKLVHGQILKL 465
+ RM GTSVL QT FF D ++ E KEQEC S++K+C+++ +F+ H QI+K
Sbjct: 96 DNRMPGTSVLQQTKFFSLPADPPQSLELSLRLKEQECFSILKRCKNMEEFRQAHAQIVKW 155
Query: 466 GFLWSSFCASSLLATCALSDWGSMDYACSIFQNIDDP 576
GF W+SFCAS+L+A CALSD GSMDYACSIFQ ID+P
Sbjct: 156 GFFWNSFCASNLVAACALSDGGSMDYACSIFQQIDEP 192
>ref|XP_006432677.1| hypothetical protein CICLE_v10000638mg [Citrus clementina]
gi|568834767|ref|XP_006471474.1| PREDICTED:
pentatricopeptide repeat-containing protein
At1g31920-like [Citrus sinensis]
gi|557534799|gb|ESR45917.1| hypothetical protein
CICLE_v10000638mg [Citrus clementina]
Length = 605
Score = 119 bits (297), Expect = 7e-25
Identities = 52/94 (55%), Positives = 69/94 (73%)
Frame = +1
Query: 295 MVGTSVLHQTHFFMPQDDYAKNPEFDFSSKEQECISLIKKCRSLMDFKLVHGQILKLGFL 474
M TSVLHQ+ ++ K PE + KEQEC++++K C++L +FK VH +LK GF
Sbjct: 1 MTRTSVLHQSLLLTQPEEPPKGPELNLRLKEQECLTILKTCKNLEEFKKVHAHVLKWGFF 60
Query: 475 WSSFCASSLLATCALSDWGSMDYACSIFQNIDDP 576
W+ FCAS+L+ATCALS WGSMDYACSIF+ ID+P
Sbjct: 61 WNPFCASNLVATCALSHWGSMDYACSIFRQIDEP 94
>ref|XP_004136211.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Cucumis sativus]
gi|449508034|ref|XP_004163198.1| PREDICTED:
pentatricopeptide repeat-containing protein
At1g31920-like [Cucumis sativus]
Length = 606
Score = 115 bits (289), Expect = 6e-24
Identities = 55/95 (57%), Positives = 69/95 (72%), Gaps = 1/95 (1%)
Frame = +1
Query: 295 MVGTSVLHQTHFFMPQDDYAKNP-EFDFSSKEQECISLIKKCRSLMDFKLVHGQILKLGF 471
M+GTSVL+ H +P D ++ E + KEQE + L+KKC+SL +FK VH QILK G
Sbjct: 1 MMGTSVLNYNHHLLPSKDLPQSSSELNLKQKEQEYLCLVKKCKSLEEFKQVHVQILKFGL 60
Query: 472 LWSSFCASSLLATCALSDWGSMDYACSIFQNIDDP 576
SFC+SS+LATCALSDW SMDYACSIFQ +D+P
Sbjct: 61 FLDSFCSSSVLATCALSDWNSMDYACSIFQQLDEP 95
>gb|EMJ12073.1| hypothetical protein PRUPE_ppa003110mg [Prunus persica]
Length = 602
Score = 108 bits (269), Expect = 1e-21
Identities = 52/94 (55%), Positives = 65/94 (69%)
Frame = +1
Query: 295 MVGTSVLHQTHFFMPQDDYAKNPEFDFSSKEQECISLIKKCRSLMDFKLVHGQILKLGFL 474
M G VL+QTH F+P PE SKEQE +SL+K+CR++ + K VH ILKLG
Sbjct: 1 MTGAPVLNQTHLFLPSKTPLGCPETSSRSKEQESLSLLKRCRNMEELKQVHAHILKLGHF 60
Query: 475 WSSFCASSLLATCALSDWGSMDYACSIFQNIDDP 576
SFCA +L+AT ALS WGSMD+ACSIFQ I++P
Sbjct: 61 CDSFCAGNLVATSALSAWGSMDHACSIFQQINEP 94
>gb|ESW30211.1| hypothetical protein PHAVU_002G134100g [Phaseolus vulgaris]
Length = 605
Score = 105 bits (262), Expect = 8e-21
Identities = 50/94 (53%), Positives = 67/94 (71%)
Frame = +1
Query: 295 MVGTSVLHQTHFFMPQDDYAKNPEFDFSSKEQECISLIKKCRSLMDFKLVHGQILKLGFL 474
M GTSVL Q+H ++ +N E + EQ +SL+K+C+S+ +FK VH QILKLG
Sbjct: 1 MSGTSVLCQSHLLSLPNNPPQNSELNAKFNEQGWLSLLKRCKSMEEFKQVHAQILKLGLF 60
Query: 475 WSSFCASSLLATCALSDWGSMDYACSIFQNIDDP 576
SFC S+L+ATCALS WGSM+YACSIF+ I++P
Sbjct: 61 LDSFCGSNLVATCALSRWGSMEYACSIFRQIEEP 94
>ref|XP_006368339.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550346246|gb|ERP64908.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 602
Score = 103 bits (257), Expect = 3e-20
Identities = 50/95 (52%), Positives = 66/95 (69%), Gaps = 1/95 (1%)
Frame = +1
Query: 295 MVGTSVLHQTHFFMPQDDYAKNPEFDFSSKEQECISLIKKCRSLMDFKLVHGQILKLGFL 474
M+GT VL + F + + KEQEC+SL+K+C+++ +FK VH Q+LK
Sbjct: 1 MIGTPVLQKIRFLSLPEAPTQTTGLSLKLKEQECLSLMKRCKNMEEFKQVHAQVLK---- 56
Query: 475 W-SSFCASSLLATCALSDWGSMDYACSIFQNIDDP 576
W +SFCAS+L+ATCALSDWGSMDYACSIF+ ID P
Sbjct: 57 WENSFCASNLVATCALSDWGSMDYACSIFRQIDQP 91
>ref|XP_004300183.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Fragaria vesca subsp. vesca]
Length = 606
Score = 102 bits (253), Expect = 9e-20
Identities = 51/95 (53%), Positives = 66/95 (69%), Gaps = 1/95 (1%)
Frame = +1
Query: 295 MVGTSVLH-QTHFFMPQDDYAKNPEFDFSSKEQECISLIKKCRSLMDFKLVHGQILKLGF 471
M GT+VL+ QTH +P D + E F KEQE +SL+K+C++L +FK VH ILKLG
Sbjct: 1 MTGTTVLNLQTHLLLPVKDPPGSQELSFRLKEQESLSLLKRCKNLEEFKQVHSHILKLGV 60
Query: 472 LWSSFCASSLLATCALSDWGSMDYACSIFQNIDDP 576
SF A +L+AT LS WGSMDYACSIF+ I++P
Sbjct: 61 SCDSFVAGNLVATNVLSAWGSMDYACSIFEQIEEP 95
>emb|CDL67990.1| putative pentatricopeptide repeat-containing protein At1g31920,
partial [Olea europaea]
Length = 199
Score = 101 bits (251), Expect = 2e-19
Identities = 41/57 (71%), Positives = 52/57 (91%)
Frame = +1
Query: 406 IKKCRSLMDFKLVHGQILKLGFLWSSFCASSLLATCALSDWGSMDYACSIFQNIDDP 576
+KKC+++ +FK +HGQI+K GFLWSSFC+S+LLATCALS+WGSMDYACSIF I+DP
Sbjct: 3 LKKCKNMQEFKQIHGQIIKFGFLWSSFCSSNLLATCALSEWGSMDYACSIFHQIEDP 59
>ref|XP_006572948.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Glycine max]
Length = 605
Score = 101 bits (251), Expect = 2e-19
Identities = 47/94 (50%), Positives = 66/94 (70%)
Frame = +1
Query: 295 MVGTSVLHQTHFFMPQDDYAKNPEFDFSSKEQECISLIKKCRSLMDFKLVHGQILKLGFL 474
M GTSVL Q+H + ++ E + EQ +SL+K+C+S+ +FK VH ILKLG
Sbjct: 1 MSGTSVLCQSHLLSLPNSPLQSSELNAKFNEQGWLSLLKRCKSMEEFKKVHAHILKLGLF 60
Query: 475 WSSFCASSLLATCALSDWGSMDYACSIFQNIDDP 576
+ SFC S+L+A+CALS WGSM+YACSIF+ I++P
Sbjct: 61 YDSFCGSNLVASCALSRWGSMEYACSIFRQIEEP 94
>ref|XP_006572946.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Glycine max]
Length = 605
Score = 100 bits (250), Expect = 2e-19
Identities = 47/94 (50%), Positives = 65/94 (69%)
Frame = +1
Query: 295 MVGTSVLHQTHFFMPQDDYAKNPEFDFSSKEQECISLIKKCRSLMDFKLVHGQILKLGFL 474
M GTSVL Q+H + ++ E + EQ +SL+K+C+S+ +FK VH ILKLG
Sbjct: 1 MSGTSVLCQSHLLSLPNSPPQSSELNAKFNEQGWLSLLKRCKSMEEFKQVHAHILKLGLF 60
Query: 475 WSSFCASSLLATCALSDWGSMDYACSIFQNIDDP 576
+ SFC S+L+A+CALS WGSM+YACSIF I++P
Sbjct: 61 YDSFCGSNLVASCALSRWGSMEYACSIFSQIEEP 94
>ref|XP_004512460.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Cicer arietinum]
Length = 606
Score = 97.8 bits (242), Expect = 2e-18
Identities = 44/94 (46%), Positives = 64/94 (68%)
Frame = +1
Query: 295 MVGTSVLHQTHFFMPQDDYAKNPEFDFSSKEQECISLIKKCRSLMDFKLVHGQILKLGFL 474
M GT+ L+QTHF + ++ ++ E S E+ + L+K+C ++ +FK VH LK G
Sbjct: 1 MTGTTALNQTHFLLLTNNSHQSFELSKSFNEKGWLCLLKRCNNMEEFKQVHAYFLKCGIF 60
Query: 475 WSSFCASSLLATCALSDWGSMDYACSIFQNIDDP 576
+ SFC S+L+ATCAL+ WGSMDYACSIF I++P
Sbjct: 61 FDSFCGSNLVATCALTKWGSMDYACSIFTQIEEP 94
>ref|XP_003533450.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Glycine max]
Length = 604
Score = 95.9 bits (237), Expect = 7e-18
Identities = 47/94 (50%), Positives = 66/94 (70%)
Frame = +1
Query: 295 MVGTSVLHQTHFFMPQDDYAKNPEFDFSSKEQECISLIKKCRSLMDFKLVHGQILKLGFL 474
M TSVL Q+HF ++ ++ E + Q +SL+K+C+S+ +FK VH ILKLG
Sbjct: 1 MSWTSVLCQSHFLSLPNNPPQSSELNAKFNVQG-LSLLKRCKSMEEFKQVHAHILKLGLF 59
Query: 475 WSSFCASSLLATCALSDWGSMDYACSIFQNIDDP 576
+ SFC S+L+ATCALS WGSM+YACSIF+ I++P
Sbjct: 60 YDSFCGSNLVATCALSRWGSMEYACSIFRQIEEP 93
>gb|AFK43998.1| unknown [Lotus japonicus]
Length = 94
Score = 89.7 bits (221), Expect = 5e-16
Identities = 43/91 (47%), Positives = 56/91 (61%)
Frame = +1
Query: 295 MVGTSVLHQTHFFMPQDDYAKNPEFDFSSKEQECISLIKKCRSLMDFKLVHGQILKLGFL 474
M T+VL QTH + E EQ L+K+C+S+ +FK VH +LKLGF
Sbjct: 1 MTRTTVLSQTHLLSLPSTPPQCSELSTRFNEQGWYPLLKRCKSMEEFKQVHAHVLKLGFF 60
Query: 475 WSSFCASSLLATCALSDWGSMDYACSIFQNI 567
SFC S+L+ATCAL+ WGSM+YACSIF +
Sbjct: 61 CDSFCGSNLVATCALAKWGSMEYACSIFSRL 91
>ref|NP_174474.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169173|sp|Q9C6T2.1|PPR68_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g31920 gi|12321292|gb|AAG50713.1|AC079041_6
PPR-repeat protein, putative [Arabidopsis thaliana]
gi|332193295|gb|AEE31416.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 606
Score = 82.8 bits (203), Expect = 6e-14
Identities = 44/82 (53%), Positives = 57/82 (69%), Gaps = 3/82 (3%)
Frame = +1
Query: 340 QDDYAKNPEFD-FSSKEQECISLIKKCRSLMDFKLVHGQILKLG-FLWSSFCASSLLATC 513
+DD NPE + F KEQEC+ L+K+C ++ +FK VH + +KL F SSF ASS+LA C
Sbjct: 14 RDDLTHNPEVNNFGGKEQECLYLLKRCHNIDEFKQVHARFIKLSLFYSSSFSASSVLAKC 73
Query: 514 ALSDW-GSMDYACSIFQNIDDP 576
A S W SM+YA SIF+ IDDP
Sbjct: 74 AHSGWENSMNYAASIFRGIDDP 95
>dbj|BAE98745.1| hypothetical protein [Arabidopsis thaliana]
Length = 527
Score = 82.8 bits (203), Expect = 6e-14
Identities = 44/82 (53%), Positives = 57/82 (69%), Gaps = 3/82 (3%)
Frame = +1
Query: 340 QDDYAKNPEFD-FSSKEQECISLIKKCRSLMDFKLVHGQILKLG-FLWSSFCASSLLATC 513
+DD NPE + F KEQEC+ L+K+C ++ +FK VH + +KL F SSF ASS+LA C
Sbjct: 14 RDDLTHNPEVNNFGGKEQECLYLLKRCHNIDEFKQVHARFIKLSLFYSSSFSASSVLAKC 73
Query: 514 ALSDW-GSMDYACSIFQNIDDP 576
A S W SM+YA SIF+ IDDP
Sbjct: 74 AHSGWENSMNYAASIFRGIDDP 95