BLASTX nr result
ID: Catharanthus22_contig00016479
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00016479
(793 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AGL91646.1| geranyl diphosphate synthase [Catharanthus roseus] 403 e-110
gb|AGH33891.1| geranyl diphsophate synthase small subunit [Lavan... 209 9e-52
gb|AEZ55678.1| geranyl diphosphate synthase small subunit type I... 207 4e-51
gb|AAS82859.1| geranyl diphosphate synthase small subunit [Antir... 207 4e-51
pdb|3QKC|B Chain B, Crystal Structure Of Geranyl Diphosphate Syn... 202 1e-49
gb|ABR15421.1| geranyl pyrophosphate synthase small subunit [Men... 199 1e-48
gb|AAF08792.1|AF182827_1 geranyl diphosphate synthase small subu... 198 2e-48
gb|ABW86880.1| geranyl pyrophosphate synthase small subunit [Men... 197 3e-48
pdb|3KRA|B Chain B, Mint Heterotetrameric Geranyl Pyrophosphate ... 196 6e-48
ref|XP_002532570.1| geranyl geranyl pyrophosphate synthase, puta... 185 1e-44
dbj|BAF98300.1| geranyl-diphosphate synthase [Hevea brasiliensis] 184 2e-44
pdb|3OAB|B Chain B, Mint Deletion Mutant Of Heterotetrameric Ger... 183 7e-44
ref|XP_002322072.2| hypothetical protein POPTR_0015s04050g [Popu... 182 2e-43
gb|EPS64735.1| geranyl diphosphate synthase small subunit, parti... 178 2e-42
ref|XP_004244349.1| PREDICTED: heterodimeric geranylgeranyl pyro... 178 2e-42
ref|XP_004491403.1| PREDICTED: heterodimeric geranylgeranyl pyro... 176 1e-41
gb|EOY12321.1| Geranyl-diphosphate synthase, putative [Theobroma... 171 4e-40
gb|EMJ15727.1| hypothetical protein PRUPE_ppa015010mg [Prunus pe... 167 5e-39
ref|XP_003617556.1| Geranylgeranyl pyrophosphate synthase [Medic... 159 1e-36
gb|AFK47692.1| unknown [Medicago truncatula] 158 2e-36
>gb|AGL91646.1| geranyl diphosphate synthase [Catharanthus roseus]
Length = 299
Score = 403 bits (1035), Expect = e-110
Identities = 206/237 (86%), Positives = 206/237 (86%)
Frame = +2
Query: 83 MAKAISSFINGGRTTFLSISRSDLSPTTPPHRPNSVICMKSNSWANIESDIQTHLKKSIP 262
MAKAISSFINGGRTTFLSISRSDLSPTTPPHRPNSVICMKSNSWANIESDIQTHLKKSIP
Sbjct: 1 MAKAISSFINGGRTTFLSISRSDLSPTTPPHRPNSVICMKSNSWANIESDIQTHLKKSIP 60
Query: 263 IRAPEDVFEPMHYLTFAAPRTTAPALCIAACEVVGGDGDQXXXXXXXXXXXXXXXXXXEN 442
IRAPEDVFEPMHYLTFAAPRTTAPALCIAACEVVGGDGDQ EN
Sbjct: 61 IRAPEDVFEPMHYLTFAAPRTTAPALCIAACEVVGGDGDQAMAAAAAIHLVHAAAYAHEN 120
Query: 443 LPLTDRRRPKPPIQHKFNSNIELLTGDGIVPYGFELLAKSMDSNNSDRILRVIIEITQAA 622
LPLTDRRRPKPPIQHKFNSNIELLTGDGIVPYGFELLAKSMDSNNSDRILRVIIEITQAA
Sbjct: 121 LPLTDRRRPKPPIQHKFNSNIELLTGDGIVPYGFELLAKSMDSNNSDRILRVIIEITQAA 180
Query: 623 GSKGIIDGQFRELDVIDSEINMGLIEYVCKKKEGELNXXXXXXXXXXXXXSEEEIGK 793
GSKGIIDGQFRELDVIDSEINMGLIEYVCKKKEGELN SEEEIGK
Sbjct: 181 GSKGIIDGQFRELDVIDSEINMGLIEYVCKKKEGELNACGAACGAILGGGSEEEIGK 237
>gb|AGH33891.1| geranyl diphsophate synthase small subunit [Lavandula x intermedia]
Length = 295
Score = 209 bits (532), Expect = 9e-52
Identities = 105/196 (53%), Positives = 135/196 (68%), Gaps = 2/196 (1%)
Frame = +2
Query: 212 WANIESDIQTHLKKSIPIRAPEDVFEPMHYLTFAAPRTTAPALCIAACEVVGGDGDQXXX 391
W++I++DI T+LKK+IPIR+PE VFEPMH+LTFAAP TTA ALC+AACE+ GG+ Q
Sbjct: 33 WSSIDADINTYLKKAIPIRSPETVFEPMHHLTFAAPTTTASALCVAACELFGGNRTQALP 92
Query: 392 XXXXXXXXXXXXXXXENLPLTDRRRP--KPPIQHKFNSNIELLTGDGIVPYGFELLAKSM 565
++LPLTDR RP KP IQHKFN NIELLTGDGI P+GFELLA S+
Sbjct: 93 AASAIHLIHAAAYTHDHLPLTDRPRPESKPDIQHKFNPNIELLTGDGIAPFGFELLANSV 152
Query: 566 DSNNSDRILRVIIEITQAAGSKGIIDGQFRELDVIDSEINMGLIEYVCKKKEGELNXXXX 745
D+ + DRILRV+IEI++A+GS+G++DG +RE ++D IEYV KKK GE++
Sbjct: 153 DTTHPDRILRVVIEISRASGSQGLVDGLYREKQIVDQRSRFEFIEYVSKKKYGEMHACGA 212
Query: 746 XXXXXXXXXSEEEIGK 793
EE+I K
Sbjct: 213 ASGVILAGGDEEQIQK 228
>gb|AEZ55678.1| geranyl diphosphate synthase small subunit type I [Salvia
miltiorrhiza]
Length = 314
Score = 207 bits (526), Expect = 4e-51
Identities = 115/237 (48%), Positives = 155/237 (65%), Gaps = 4/237 (1%)
Frame = +2
Query: 95 ISSFINGGRTTFLSISRSDLSPTTPPHRPNSVICMKSNSWANIESDIQTHLKKSIPIRAP 274
+S ++N +++F +RS+LS ++ +V+ + WA IE+DI T+LKKSI IR+P
Sbjct: 15 MSIYVNT-KSSFPFKTRSNLSRSS--RACTAVVAQNHSYWAAIEADIDTYLKKSIAIRSP 71
Query: 275 EDVFEPMHYLTFAAPRTTAPALCIAACEVVGGDGDQXXXXXXXXXXXXXXXXXXENLPLT 454
E VFEPMH+LTFAAPRT A A+C+AACE+VGG+ Q E+LPLT
Sbjct: 72 ETVFEPMHHLTFAAPRTAASAICVAACELVGGERSQAIATASAIHIMHAAAYAHEHLPLT 131
Query: 455 DRRRP--KPPIQHKFNSNIELLTGDGIVPYGFELLAKSM--DSNNSDRILRVIIEITQAA 622
DR RP KP IQHK+ NIELLTGDG+ +GFELLA S+ D N +RILRVIIEI++A+
Sbjct: 132 DRPRPNSKPAIQHKYGPNIELLTGDGMASFGFELLAGSIRSDHPNPERILRVIIEISRAS 191
Query: 623 GSKGIIDGQFRELDVIDSEINMGLIEYVCKKKEGELNXXXXXXXXXXXXXSEEEIGK 793
GS+GIIDG +RE +++D IEY+C+KK GE++ +EEEI K
Sbjct: 192 GSEGIIDGFYREKEIVDQHSRFDFIEYLCRKKYGEMHACAAASGAILAGGAEEEIQK 248
>gb|AAS82859.1| geranyl diphosphate synthase small subunit [Antirrhinum majus]
Length = 297
Score = 207 bits (526), Expect = 4e-51
Identities = 120/241 (49%), Positives = 156/241 (64%), Gaps = 4/241 (1%)
Frame = +2
Query: 83 MAKAISSFINGGRTTFLSISRSDLSPTTPPHRPNSVICMKSNSW-ANIESDIQTHLKKSI 259
MA ++ F N F SI++S T P RP + ++ ++ A IESDI+++LKK+I
Sbjct: 1 MAHGLTHF-NTKSGLFPSITKS--KTTRPSTRPVILAMTRTQTYRATIESDIESYLKKAI 57
Query: 260 PIRAPEDVFEPMHYLTFAAPRTTAPALCIAACEVVGGDGDQXXXXXXXXXXXXXXXXXXE 439
PIRAPE VFEPMH+LTFAAPRT+A ALC+AACE+VGGD E
Sbjct: 58 PIRAPESVFEPMHHLTFAAPRTSASALCVAACELVGGDRSDAMAAAAAVHLMHVAAYTHE 117
Query: 440 NLPLTDRRRPKPPIQHKFNSNIELLTGDGIVPYGFELLAKSMD--SNNSDRILRVIIEIT 613
NLPLTD K IQHKF+ NIELLTGDGI+P+G EL+A+SMD NN DRILR IIE+T
Sbjct: 118 NLPLTDGPMSKSEIQHKFDPNIELLTGDGIIPFGLELMARSMDPTRNNPDRILRAIIELT 177
Query: 614 QAAGSKGIIDGQFRELDVIDSEIN-MGLIEYVCKKKEGELNXXXXXXXXXXXXXSEEEIG 790
+ GS+GI++GQ+ EL + +++N + LIEYVCKKKEG L+ E++I
Sbjct: 178 RVMGSEGIVEGQYHELGL--NQLNDLELIEYVCKKKEGTLHACGAACGAILGGCDEDKIE 235
Query: 791 K 793
K
Sbjct: 236 K 236
>pdb|3QKC|B Chain B, Crystal Structure Of Geranyl Diphosphate Synthase Small
Subunit From Antirrhinum Majus gi|323463188|pdb|3QKC|A
Chain A, Crystal Structure Of Geranyl Diphosphate
Synthase Small Subunit From Antirrhinum Majus
Length = 273
Score = 202 bits (513), Expect = 1e-49
Identities = 108/196 (55%), Positives = 135/196 (68%), Gaps = 3/196 (1%)
Frame = +2
Query: 215 ANIESDIQTHLKKSIPIRAPEDVFEPMHYLTFAAPRTTAPALCIAACEVVGGDGDQXXXX 394
A IESDI+++LKK+IPIRAPE VFEPMH+LTFAAPRT+A ALC+AACE+VGGD
Sbjct: 11 ATIESDIESYLKKAIPIRAPESVFEPMHHLTFAAPRTSASALCVAACELVGGDRSDAMAA 70
Query: 395 XXXXXXXXXXXXXXENLPLTDRRRPKPPIQHKFNSNIELLTGDGIVPYGFELLAKSMD-- 568
ENLPLTD K IQHKF+ NIELLTGDGI+P+G EL+A+SMD
Sbjct: 71 AAAVHLMHVAAYTHENLPLTDGPMSKSEIQHKFDPNIELLTGDGIIPFGLELMARSMDPT 130
Query: 569 SNNSDRILRVIIEITQAAGSKGIIDGQFRELDVIDSEIN-MGLIEYVCKKKEGELNXXXX 745
NN DRILR IIE+T+ GS+GI++GQ+ EL + +++N + LIEYVCKKKEG L+
Sbjct: 131 RNNPDRILRAIIELTRVMGSEGIVEGQYHELGL--NQLNDLELIEYVCKKKEGTLHACGA 188
Query: 746 XXXXXXXXXSEEEIGK 793
E++I K
Sbjct: 189 ACGAILGGCDEDKIEK 204
>gb|ABR15421.1| geranyl pyrophosphate synthase small subunit [Mentha canadensis]
Length = 313
Score = 199 bits (505), Expect = 1e-48
Identities = 120/252 (47%), Positives = 150/252 (59%), Gaps = 21/252 (8%)
Frame = +2
Query: 101 SFINGGRTTFLSISRSDLSPTTPPHRPNSVICMKSNS----------------WANIESD 232
S IN +T F +RSDLS R +S CM + + WA IE+D
Sbjct: 6 SHINS-KTCFPLKTRSDLS------RSSSARCMPTAAAAAFPTIATAAQSQPYWAAIEAD 58
Query: 233 IQTHLKKSIPIRAPEDVFEPMHYLTFAAPRTTAPALCIAACEVVGGDGDQXXXXXXXXXX 412
I +LKKSI IR PE VF PMH+LTFAAP T A ALC+AACE+VGGD Q
Sbjct: 59 IDRYLKKSITIRPPETVFGPMHHLTFAAPATAASALCLAACELVGGDRSQAMAAAAAIHL 118
Query: 413 XXXXXXXXENLPLTDRRRP--KPPIQHKFNSNIELLTGDGIVPYGFELLAKSMD---SNN 577
E+LPLTD RP KP IQHK+ N+ELLTGDGIVP+GFELLA S+D +++
Sbjct: 119 VHAAAYVHEHLPLTDGSRPVSKPAIQHKYGPNVELLTGDGIVPFGFELLAGSVDPARTDD 178
Query: 578 SDRILRVIIEITQAAGSKGIIDGQFRELDVIDSEINMGLIEYVCKKKEGELNXXXXXXXX 757
DRILRVIIEI++A G +G+I G RE +++D ++ IEYVCKKK GE++
Sbjct: 179 PDRILRVIIEISRAGGPEGMISGLHREEEIVDGNTSLDFIEYVCKKKYGEMHACGAACGA 238
Query: 758 XXXXXSEEEIGK 793
+EEEI K
Sbjct: 239 ILGGAAEEEIQK 250
>gb|AAF08792.1|AF182827_1 geranyl diphosphate synthase small subunit [Mentha x piperita]
gi|10637873|emb|CAC10560.1| gpp synthase small subunit
[Mentha x piperita]
Length = 313
Score = 198 bits (503), Expect = 2e-48
Identities = 119/252 (47%), Positives = 150/252 (59%), Gaps = 21/252 (8%)
Frame = +2
Query: 101 SFINGGRTTFLSISRSDLSPTTPPHRPNSVICMKSNS----------------WANIESD 232
S IN +T F +RSDLS R +S CM + + WA IE+D
Sbjct: 6 SHINS-KTCFPLKTRSDLS------RSSSARCMPTAAAAAFPTIATAAQSQPYWAAIEAD 58
Query: 233 IQTHLKKSIPIRAPEDVFEPMHYLTFAAPRTTAPALCIAACEVVGGDGDQXXXXXXXXXX 412
I+ +LKKSI IR PE VF PMH+LTFAAP T A LC+AACE+VGGD Q
Sbjct: 59 IERYLKKSITIRPPETVFGPMHHLTFAAPATAASTLCLAACELVGGDRSQAMAAAAAIHL 118
Query: 413 XXXXXXXXENLPLTDRRRP--KPPIQHKFNSNIELLTGDGIVPYGFELLAKSMD---SNN 577
E+LPLTD RP KP IQHK+ N+ELLTGDGIVP+GFELLA S+D +++
Sbjct: 119 VHAAAYVHEHLPLTDGSRPVSKPAIQHKYGPNVELLTGDGIVPFGFELLAGSVDPARTDD 178
Query: 578 SDRILRVIIEITQAAGSKGIIDGQFRELDVIDSEINMGLIEYVCKKKEGELNXXXXXXXX 757
DRILRVIIEI++A G +G+I G RE +++D ++ IEYVCKKK GE++
Sbjct: 179 PDRILRVIIEISRAGGPEGMISGLHREEEIVDGNTSLDFIEYVCKKKYGEMHACGAACGA 238
Query: 758 XXXXXSEEEIGK 793
+EEEI K
Sbjct: 239 ILGGAAEEEIQK 250
>gb|ABW86880.1| geranyl pyrophosphate synthase small subunit [Mentha x piperita]
Length = 313
Score = 197 bits (502), Expect = 3e-48
Identities = 119/246 (48%), Positives = 149/246 (60%), Gaps = 15/246 (6%)
Frame = +2
Query: 101 SFINGGRTTFLSISRSDLSPT-------TPPHRPNSVICMKSNS---WANIESDIQTHLK 250
S IN +T F +RSDLS + T +I + S WA IE+DI +LK
Sbjct: 6 SHINS-KTCFPLKTRSDLSRSSSGRCMPTAAAAAFPIIATAAQSQPYWAAIEADIDRYLK 64
Query: 251 KSIPIRAPEDVFEPMHYLTFAAPRTTAPALCIAACEVVGGDGDQXXXXXXXXXXXXXXXX 430
KSI IR PE VF PMH+LTFAAP T A ALC+AACE+VGGD Q
Sbjct: 65 KSITIRPPETVFGPMHHLTFAAPATAASALCLAACELVGGDRSQAMAAAAAIHLVHAAAY 124
Query: 431 XXENLPLTDRRRP--KPPIQHKFNSNIELLTGDGIVPYGFELLAKSMD---SNNSDRILR 595
E+LPLTD RP KP IQHK+ N+ELLTGDGIVP+GFELLA S+D +++ DRILR
Sbjct: 125 VHEHLPLTDGSRPVSKPAIQHKYGPNVELLTGDGIVPFGFELLAGSVDPARTDDPDRILR 184
Query: 596 VIIEITQAAGSKGIIDGQFRELDVIDSEINMGLIEYVCKKKEGELNXXXXXXXXXXXXXS 775
VIIEI++A G +G+I G RE +++D ++ IEYVCKKK GE++ +
Sbjct: 185 VIIEISRAGGPEGMISGLHREEEIVDGNTSLDFIEYVCKKKYGEMHACGAACGAILGGAA 244
Query: 776 EEEIGK 793
EEEI K
Sbjct: 245 EEEIQK 250
>pdb|3KRA|B Chain B, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Magnesium gi|289526779|pdb|3KRA|C Chain C,
Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Magnesium gi|289526782|pdb|3KRC|B Chain B,
Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Ipp gi|289526783|pdb|3KRC|C Chain C, Mint
Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Ipp gi|289526786|pdb|3KRF|B Chain B, Mint
Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Magnesium, Ipp, And Dmaspp (i)
gi|289526787|pdb|3KRF|C Chain C, Mint Heterotetrameric
Geranyl Pyrophosphate Synthase In Complex With
Magnesium, Ipp, And Dmaspp (i) gi|289526790|pdb|3KRO|B
Chain B, Mint Heterotetrameric Geranyl Pyrophosphate
Synthase In Complex With Magnesium, Ipp, And Dmaspp (ii)
gi|289526791|pdb|3KRO|C Chain C, Mint Heterotetrameric
Geranyl Pyrophosphate Synthase In Complex With
Magnesium, Ipp, And Dmaspp (ii) gi|289526794|pdb|3KRP|B
Chain B, Mint Heterotetrameric Geranyl Pyrophosphate
Synthase In Complex With Magnesium And Gpp
gi|289526795|pdb|3KRP|C Chain C, Mint Heterotetrameric
Geranyl Pyrophosphate Synthase In Complex With Magnesium
And Gpp
Length = 274
Score = 196 bits (499), Expect = 6e-48
Identities = 105/199 (52%), Positives = 131/199 (65%), Gaps = 5/199 (2%)
Frame = +2
Query: 212 WANIESDIQTHLKKSIPIRAPEDVFEPMHYLTFAAPRTTAPALCIAACEVVGGDGDQXXX 391
WA IE+DI+ +LKKSI IR PE VF PMH+LTFAAP T A LC+AACE+VGGD Q
Sbjct: 5 WAAIEADIERYLKKSITIRPPETVFGPMHHLTFAAPATAASTLCLAACELVGGDRSQAMA 64
Query: 392 XXXXXXXXXXXXXXXENLPLTDRRRP--KPPIQHKFNSNIELLTGDGIVPYGFELLAKSM 565
E+LPLTD RP KP IQHK+ N+ELLTGDGIVP+GFELLA S+
Sbjct: 65 AAAAIHLVHAAAYVHEHLPLTDGSRPVSKPAIQHKYGPNVELLTGDGIVPFGFELLAGSV 124
Query: 566 D---SNNSDRILRVIIEITQAAGSKGIIDGQFRELDVIDSEINMGLIEYVCKKKEGELNX 736
D +++ DRILRVIIEI++A G +G+I G RE +++D ++ IEYVCKKK GE++
Sbjct: 125 DPARTDDPDRILRVIIEISRAGGPEGMISGLHREEEIVDGNTSLDFIEYVCKKKYGEMHA 184
Query: 737 XXXXXXXXXXXXSEEEIGK 793
+EEEI K
Sbjct: 185 CGAACGAILGGAAEEEIQK 203
>ref|XP_002532570.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis]
gi|223527725|gb|EEF29831.1| geranyl geranyl
pyrophosphate synthase, putative [Ricinus communis]
Length = 308
Score = 185 bits (470), Expect = 1e-44
Identities = 104/215 (48%), Positives = 134/215 (62%), Gaps = 13/215 (6%)
Frame = +2
Query: 188 VICMKSNS-----WANIESDIQTHLKKSIPIRAPEDVFEPMHYLTFAAPRTTAPALCIAA 352
V C+ SNS W I +DI+THLK++IP+R P VFEPMH+LTFAAPR+ APALCIAA
Sbjct: 36 VACVMSNSSKIDYWTCINADIETHLKEAIPVRPPVVVFEPMHHLTFAAPRSFAPALCIAA 95
Query: 353 CEVVGGDGDQXXXXXXXXXXXXXXXXXXENLPLTDRRRP--KPPIQHKFNSNIELLTGDG 526
CE+VGG DQ EN+PLTDR RP +P H F NIELLTGDG
Sbjct: 96 CELVGGSRDQALAAASALRLMIAAAFTHENIPLTDRPRPSARPMFHHTFGPNIELLTGDG 155
Query: 527 IVPYGFELLAK--SMDSNNSDRILRVIIEITQAAGSKGIIDGQFREL----DVIDSEINM 688
++P+ FELLA+ + +NSDRILRV+IEI++A GS+G+++GQ+ E V D ++
Sbjct: 156 MIPFAFELLAQLNNPAQDNSDRILRVMIEISRAMGSQGMVEGQYNEFQYDQSVGDELFHV 215
Query: 689 GLIEYVCKKKEGELNXXXXXXXXXXXXXSEEEIGK 793
+ VCKKKEG + +EEEI K
Sbjct: 216 AWLRDVCKKKEGASHACAGACGAILGGGNEEEIEK 250
>dbj|BAF98300.1| geranyl-diphosphate synthase [Hevea brasiliensis]
Length = 306
Score = 184 bits (468), Expect = 2e-44
Identities = 110/247 (44%), Positives = 150/247 (60%), Gaps = 10/247 (4%)
Frame = +2
Query: 83 MAKAISSFINGGRTTFLSISRSDLSPTTP--PHRPNSVICMKSNS-WANIESDIQTHLKK 253
MA A+SS I+G ++ + S +P P HRP V S W+++ +D+ THLK+
Sbjct: 1 MAGALSSTIHGN---LIARAVSSSNPKHPLFSHRPMVVAMSTDQSYWSSVNADLDTHLKQ 57
Query: 254 SIPIRAPEDVFEPMHYLTFAAPRTTAPALCIAACEVVGGDGDQXXXXXXXXXXXXXXXXX 433
+IPIR P VFEPM +L +AP+T+APALCIAACE+VGG +Q
Sbjct: 58 AIPIRQPLAVFEPMRHLILSAPQTSAPALCIAACELVGGHRNQAMAAASALRLVHASAST 117
Query: 434 XENLPLTDRRRPKPPIQHK-FNSNIELLTGDGIVPYGFELLAKSMDS--NNSDRILRVII 604
ENLPLTDR RP P + + NIELL DGI+PYGFELLA+ D+ NNS+R+LR II
Sbjct: 118 HENLPLTDRPRPMPRTRPTLYGPNIELLIADGIIPYGFELLARDDDAAENNSNRVLRAII 177
Query: 605 EITQAAGSKGIIDGQFRELDVIDSE----INMGLIEYVCKKKEGELNXXXXXXXXXXXXX 772
EI++A GS+G+I+GQ+ E +SE ++G ++ VC+KKEG L+
Sbjct: 178 EISRAMGSQGVIEGQYNESQYEESEGEEIFHVGWLQNVCRKKEGTLHACAGACGAILGGG 237
Query: 773 SEEEIGK 793
SE+EI K
Sbjct: 238 SEDEIEK 244
>pdb|3OAB|B Chain B, Mint Deletion Mutant Of Heterotetrameric Geranyl
Pyrophosphate Synthase In Complex With Ligands
gi|310942865|pdb|3OAB|C Chain C, Mint Deletion Mutant Of
Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Ligands gi|310942868|pdb|3OAC|B Chain B,
Mint Deletion Mutant Of Heterotetrameric Geranyl
Pyrophosphate Synthase In Complex With Ligands
gi|310942869|pdb|3OAC|C Chain C, Mint Deletion Mutant Of
Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Ligands
Length = 264
Score = 183 bits (464), Expect = 7e-44
Identities = 99/197 (50%), Positives = 125/197 (63%), Gaps = 3/197 (1%)
Frame = +2
Query: 212 WANIESDIQTHLKKSIPIRAPEDVFEPMHYLTFAAPRTTAPALCIAACEVVGGDGDQXXX 391
WA IE+DI+ +LKKSI IR PE VF PMH+LTFAAP T A LC+AACE+VGGD Q
Sbjct: 5 WAAIEADIERYLKKSITIRPPETVFGPMHHLTFAAPATAASTLCLAACELVGGDRSQAMA 64
Query: 392 XXXXXXXXXXXXXXXENLPLTDRRRPKPPIQHKFNSNIELLTGDGIVPYGFELLAKSMD- 568
E+LP P IQHK+ N+ELLTGDGIVP+GFELLA S+D
Sbjct: 65 AAAAIHLVHAAAYVHEHLP--------PAIQHKYGPNVELLTGDGIVPFGFELLAGSVDP 116
Query: 569 --SNNSDRILRVIIEITQAAGSKGIIDGQFRELDVIDSEINMGLIEYVCKKKEGELNXXX 742
+++ DRILRVIIEI++A G +G+I G RE +++D ++ IEYVCKKK GE++
Sbjct: 117 ARTDDPDRILRVIIEISRAGGPEGMISGLHREEEIVDGNTSLDFIEYVCKKKYGEMHACG 176
Query: 743 XXXXXXXXXXSEEEIGK 793
+EEEI K
Sbjct: 177 AACGAILGGAAEEEIQK 193
>ref|XP_002322072.2| hypothetical protein POPTR_0015s04050g [Populus trichocarpa]
gi|550321901|gb|EEF06199.2| hypothetical protein
POPTR_0015s04050g [Populus trichocarpa]
Length = 312
Score = 182 bits (461), Expect = 2e-43
Identities = 108/229 (47%), Positives = 137/229 (59%), Gaps = 10/229 (4%)
Frame = +2
Query: 137 ISRSDLSPTTPPHRPNSVICMKSNS--------WANIESDIQTHLKKSIPIRAPEDVFEP 292
+ RS+ + HRP +V +++ W ++ +I HLK++IPIR P VFEP
Sbjct: 20 LPRSNTNRPLLSHRPMTVAVTATSNGTTYNKSYWTSVNDEIDAHLKQAIPIRPPLSVFEP 79
Query: 293 MHYLTFAAPRTTAPALCIAACEVVGGDGDQXXXXXXXXXXXXXXXXXXENLPLTDRRRPK 472
MH+LTFAAPRTTAPALCIAACE+VGG+ DQ E++ T R
Sbjct: 80 MHHLTFAAPRTTAPALCIAACELVGGNRDQAMAAASALRLMHAAALTHEHILSTGNR--- 136
Query: 473 PPIQHKFNSNIELLTGDGIVPYGFELLAKSMD--SNNSDRILRVIIEITQAAGSKGIIDG 646
I H F SNIELLTGDG+VP+G ELLAKS D NNS+RILRVIIEITQA GS+G+ G
Sbjct: 137 ARIGHSFGSNIELLTGDGMVPFGLELLAKSDDLTQNNSERILRVIIEITQAMGSQGMALG 196
Query: 647 QFRELDVIDSEINMGLIEYVCKKKEGELNXXXXXXXXXXXXXSEEEIGK 793
Q+ + S+ I++VCKKKEGEL+ +EEEI K
Sbjct: 197 QYNQFQHGQSD----YIDHVCKKKEGELHSCAGAVGAILGGGTEEEIEK 241
>gb|EPS64735.1| geranyl diphosphate synthase small subunit, partial [Genlisea
aurea]
Length = 211
Score = 178 bits (452), Expect = 2e-42
Identities = 94/196 (47%), Positives = 130/196 (66%), Gaps = 4/196 (2%)
Frame = +2
Query: 212 WANIESDIQTHLKKSIPIRAPEDVFEPMHYLTFAAPRTTAPALCIAACEVVGGDGDQXXX 391
W I+ D+Q +LK++IP PE V+EPM +LTFAAP TTA +LC+AACE+VGGD Q
Sbjct: 3 WEGIQCDVQLYLKEAIPRGPPEAVYEPMRHLTFAAPTTTASSLCVAACELVGGDRKQAIA 62
Query: 392 XXXXXXXXXXXXXXXENLPLTDRRRP-KPPIQHKFNSNIELLTGDGIVPYGFELLAKSMD 568
E+LPLT+ P + PI+H++ NIELLTGDG++P+G EL+A+SMD
Sbjct: 63 AAAALHLMHAALYAHEHLPLTEGHPPSRRPIEHRYGPNIELLTGDGLIPFGVELVAQSMD 122
Query: 569 --SNNSDRILRVIIEITQAAGSKGIIDGQFRELDV-IDSEINMGLIEYVCKKKEGELNXX 739
SNN DRIL+VIIEIT+A GS+G++DG +R ++ + S+ ++ +EYVCKK EGE++
Sbjct: 123 PSSNNHDRILKVIIEITRATGSQGMVDGLYRRKNLELHSDSDITELEYVCKKIEGEIHAC 182
Query: 740 XXXXXXXXXXXSEEEI 787
EEEI
Sbjct: 183 GGACGAILGGAGEEEI 198
>ref|XP_004244349.1| PREDICTED: heterodimeric geranylgeranyl pyrophosphate synthase
small subunit, chloroplastic-like [Solanum lycopersicum]
Length = 269
Score = 178 bits (452), Expect = 2e-42
Identities = 97/202 (48%), Positives = 128/202 (63%), Gaps = 10/202 (4%)
Frame = +2
Query: 212 WANIESDIQTHLKKSIPIRAPEDVFEPMHYLTFAAPRTTAPALCIAACEVVGGDGDQXXX 391
WA+IESDI+ HLKK+I IRAPE VFEPMHYLTF P++TAPALC+AACE+VGGD D+
Sbjct: 8 WASIESDIEAHLKKAISIRAPESVFEPMHYLTFTTPKSTAPALCVAACELVGGDRDRAMA 67
Query: 392 XXXXXXXXXXXXXXXENLPLTDRRRPKPPI-------QHKFNSNIELLTGDGIVPYGFEL 550
+++ + R P P I +HKF NIELLTGDGI+P+ EL
Sbjct: 68 AASAIHLMHVATYTHQHMTMA-RTEPGPVIEHKDIEPEHKFGPNIELLTGDGIMPFAIEL 126
Query: 551 LAKSMD--SNNSDRILRVIIEITQAAGSKGIIDGQFRELDVIDS-EINMGLIEYVCKKKE 721
+ K+M NSD+I+ VIIE+T+A GS+G ++GQ+REL+ S + EYVCKKKE
Sbjct: 127 IVKAMSPARKNSDKIVSVIIEVTRAFGSQGQLEGQYRELEWAQSGNEDEETFEYVCKKKE 186
Query: 722 GELNXXXXXXXXXXXXXSEEEI 787
GE++ ++EEI
Sbjct: 187 GEIHACGATCGAILGDGNDEEI 208
>ref|XP_004491403.1| PREDICTED: heterodimeric geranylgeranyl pyrophosphate synthase
small subunit, chloroplastic-like [Cicer arietinum]
Length = 302
Score = 176 bits (445), Expect = 1e-41
Identities = 100/230 (43%), Positives = 138/230 (60%), Gaps = 10/230 (4%)
Frame = +2
Query: 128 FLSISRSDLSPTTPPHRPNSVICMKSNS------WANIESDIQTHLKKSIPIRAPEDVFE 289
F IS+S+ + P +P +V + + WA++++DI+ HLK+SI I+ P VFE
Sbjct: 17 FSCISKSNQYRSHLPLKPTTVRMSMTQTHHTHPYWASLQADIEAHLKQSITIKEPLVVFE 76
Query: 290 PMHYLTFAAPRTTAPALCIAACEVVGGDGDQXXXXXXXXXXXXXXXXXXENLPLTDRRRP 469
PMH+L F AP+TT PALC+AACE+VGG +Q E+L L+DR +P
Sbjct: 77 PMHHLVFNAPKTTVPALCLAACELVGGQRNQAISAASALLLMEAATYTHEHLLLSDRPKP 136
Query: 470 KPPIQHKFNSNIELLTGDGIVPYGFELLAKSMDSNNSDRILRVIIEITQAAGSKGIIDGQ 649
KP I H + N+ELLTGDGIVP+GFELLA+S NS+RILRV++EI++A GS G+ID Q
Sbjct: 137 KPVITHAYGPNVELLTGDGIVPFGFELLARSNGGENSERILRVMVEISRAVGSGGVIDAQ 196
Query: 650 FREL----DVIDSEINMGLIEYVCKKKEGELNXXXXXXXXXXXXXSEEEI 787
+R+ D ++ I V +K EGEL+ SEEEI
Sbjct: 197 YRKTMDSGSDGDEMCHVEGIRRVVEKYEGELHACGAVCGGVLGGGSEEEI 246
>gb|EOY12321.1| Geranyl-diphosphate synthase, putative [Theobroma cacao]
Length = 300
Score = 171 bits (432), Expect = 4e-40
Identities = 103/244 (42%), Positives = 140/244 (57%), Gaps = 7/244 (2%)
Frame = +2
Query: 83 MAKAISSFINGGRTTFLSISRSDLSPTTPPHRPNSVICMKSNS-WANIESDIQTHLKKSI 259
MA+A+S ING + + P P++P V + S WA+I +DI+ HLK++I
Sbjct: 1 MARALSH-INGN-----PLLQVPCRPNPMPYKPMMVTMSCNQSYWASINADIEAHLKQAI 54
Query: 260 PIRAPEDVFEPMHYLTFAAPRTTAPALCIAACEVVGGDGDQXXXXXXXXXXXXXXXXXXE 439
P+R P V +PMH+LTFA P+ TAPALC+AACE+VGG DQ E
Sbjct: 55 PVREPLSVSQPMHHLTFACPKNTAPALCVAACELVGGHRDQALPAASALHLMYAASFTHE 114
Query: 440 NLPLTDRRRPKPPIQHKFNSNIELLTGDGIVPYGFELLAKSMD--SNNSDRILRVIIEIT 613
LPLT RP+ IQH + NIELL GD ++P G ELLA+S D +S+R+LRV++EIT
Sbjct: 115 QLPLTQSSRPRSTIQHAYGPNIELLIGDAMIPSGLELLARSDDPAHTDSERVLRVMVEIT 174
Query: 614 QAAGSKGIIDGQFRELDVIDS----EINMGLIEYVCKKKEGELNXXXXXXXXXXXXXSEE 781
+A GS+G+I GQ+ E++ S M IE + +K EG L+ SEE
Sbjct: 175 RATGSQGMIHGQYYEVERCQSGNKEASYMVEIERISEKYEGALHACAAACGAIVGGGSEE 234
Query: 782 EIGK 793
EI K
Sbjct: 235 EIEK 238
>gb|EMJ15727.1| hypothetical protein PRUPE_ppa015010mg [Prunus persica]
Length = 296
Score = 167 bits (422), Expect = 5e-39
Identities = 96/222 (43%), Positives = 134/222 (60%), Gaps = 5/222 (2%)
Frame = +2
Query: 137 ISRSDLSPTTPPHRPNSVICMKSNSWANIESDIQTHLKKSIPIRAPEDVFEPMHYLTFAA 316
+SRS+ P+ P +++ WA++ ++I+ HLK+ I +R P VFEPMH+L F+A
Sbjct: 18 MSRSN--PSRPSRTTMAIMSQDHPYWASVHAEIEVHLKQHILVRPPLSVFEPMHHLVFSA 75
Query: 317 PRTTAPALCIAACEVVGGDGDQXXXXXXXXXXXXXXXXXXENLPLTDRRRPKP---PIQH 487
P + PALC+AACE+VGG DQ E L TDR + KP P+ H
Sbjct: 76 PPSPGPALCVAACELVGGHRDQAIAAAAALHLMHAAAVIHEQLLSTDRLKTKPKPRPMVH 135
Query: 488 KFNSNIELLTGDGIVPYGFELLAKSMD--SNNSDRILRVIIEITQAAGSKGIIDGQFREL 661
+ IELLTGDG+ +G+ELLAKSMD NNSDRILRVI+E+T+A GS+G++DGQ+ E+
Sbjct: 136 --SPGIELLTGDGMFAFGYELLAKSMDPAQNNSDRILRVIVEMTRAMGSQGMVDGQYHEI 193
Query: 662 DVIDSEINMGLIEYVCKKKEGELNXXXXXXXXXXXXXSEEEI 787
++ + +YVC+KKEG L+ SEEEI
Sbjct: 194 LMLCKQSRH--YKYVCEKKEGGLHACGAACGAILGGASEEEI 233
>ref|XP_003617556.1| Geranylgeranyl pyrophosphate synthase [Medicago truncatula]
gi|355518891|gb|AET00515.1| Geranylgeranyl pyrophosphate
synthase [Medicago truncatula]
Length = 297
Score = 159 bits (402), Expect = 1e-36
Identities = 88/197 (44%), Positives = 121/197 (61%), Gaps = 5/197 (2%)
Frame = +2
Query: 212 WANIESDIQTHLKKSIPIRAPEDVFEPMHYLTFAAPRTTAPALCIAACEVVGGDGDQXXX 391
WA++ +DI+ HLK++I I+ P VFEPMH+L F AP+TT PALC+A CE+VGG Q
Sbjct: 47 WASLHADIEAHLKQTITIKEPLVVFEPMHHLIFTAPKTTVPALCLATCELVGGQRHQAIS 106
Query: 392 XXXXXXXXXXXXXXXENLPLTDRRRPKPPIQHKFNSNIELLTGDGIVPYGFELLAKSMDS 571
E+LPLTD RP+P I H + N+ELLTGDGIVP+GFELLA+S
Sbjct: 107 AASALLLMEAATYTHEHLPLTD--RPRPMINHVYGPNMELLTGDGIVPFGFELLARSDGG 164
Query: 572 NNSDRILRVIIEITQAAGS-KGIIDGQFRELDVIDSE----INMGLIEYVCKKKEGELNX 736
NS+RIL+V++EI++A GS G+ID Q+ ++ S+ ++ I +V +K EG L+
Sbjct: 165 ENSERILKVMVEISRAVGSGGGVIDAQYGKILYSGSDGEEKCHVEEIRHVVEKYEGRLHS 224
Query: 737 XXXXXXXXXXXXSEEEI 787
EEEI
Sbjct: 225 CGAVCGGVLGGGCEEEI 241
>gb|AFK47692.1| unknown [Medicago truncatula]
Length = 297
Score = 158 bits (400), Expect = 2e-36
Identities = 88/197 (44%), Positives = 120/197 (60%), Gaps = 5/197 (2%)
Frame = +2
Query: 212 WANIESDIQTHLKKSIPIRAPEDVFEPMHYLTFAAPRTTAPALCIAACEVVGGDGDQXXX 391
WA++ +DI+ HLK++I I+ P VFEPMH+L F AP+TT PALC+A CE VGG Q
Sbjct: 47 WASLHADIEAHLKQTITIKEPLVVFEPMHHLIFTAPKTTVPALCLATCEFVGGQRHQAIS 106
Query: 392 XXXXXXXXXXXXXXXENLPLTDRRRPKPPIQHKFNSNIELLTGDGIVPYGFELLAKSMDS 571
E+LPLTD RP+P I H + N+ELLTGDGIVP+GFELLA+S
Sbjct: 107 AASALLLMEAATYTHEHLPLTD--RPRPMINHVYGPNMELLTGDGIVPFGFELLARSDGG 164
Query: 572 NNSDRILRVIIEITQAAGS-KGIIDGQFRELDVIDSE----INMGLIEYVCKKKEGELNX 736
NS+RIL+V++EI++A GS G+ID Q+ ++ S+ ++ I +V +K EG L+
Sbjct: 165 ENSERILKVMVEISRAVGSGGGVIDAQYGKILYSGSDGEEKCHVEEIRHVVEKYEGRLHS 224
Query: 737 XXXXXXXXXXXXSEEEI 787
EEEI
Sbjct: 225 CGAVCGGVLGGGCEEEI 241