BLASTX nr result
ID: Catharanthus22_contig00016290
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00016290
(310 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006848921.1| hypothetical protein AMTR_s02100p00009220, p... 67 3e-21
emb|CAN77247.1| hypothetical protein VITISV_021658 [Vitis vinifera] 70 6e-20
emb|CAN74973.1| hypothetical protein VITISV_001042 [Vitis vinifera] 69 5e-19
emb|CAN76474.1| hypothetical protein VITISV_016008 [Vitis vinifera] 67 4e-18
emb|CAN68499.1| hypothetical protein VITISV_041099 [Vitis vinifera] 65 5e-18
ref|XP_006606762.1| PREDICTED: uncharacterized protein LOC102662... 70 1e-17
emb|CAN77900.1| hypothetical protein VITISV_037350 [Vitis vinifera] 68 2e-17
ref|XP_006490837.1| PREDICTED: uncharacterized protein LOC102624... 63 2e-17
ref|XP_004515184.1| PREDICTED: uncharacterized protein LOC101510... 70 3e-16
gb|AAV88076.1| putative retrotransposon polyprotein [Ipomoea bat... 66 1e-15
emb|CAN67751.1| hypothetical protein VITISV_030106 [Vitis vinifera] 57 4e-15
ref|XP_006580738.1| PREDICTED: uncharacterized protein LOC102669... 62 1e-14
gb|AAW28578.1| Putative gag-pol polyprotein, identical [Solanum ... 59 2e-14
gb|AAW28577.1| Putative gag-pol polyprotein, identical [Solanum ... 59 2e-14
gb|AAW28576.2| Gag-pol polyprotein, putative [Solanum demissum] 59 2e-14
gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group] 62 1e-13
gb|AAT85159.1| unknown protein [Oryza sativa Japonica Group] gi|... 62 2e-13
ref|XP_006591601.1| PREDICTED: uncharacterized protein LOC102659... 57 2e-13
gb|AAQ56407.1| putative gag-pol polyprotein [Oryza sativa Japoni... 67 3e-13
ref|XP_006380063.1| hypothetical protein POPTR_0008s20820g [Popu... 63 3e-13
>ref|XP_006848921.1| hypothetical protein AMTR_s02100p00009220, partial [Amborella
trichopoda] gi|548852379|gb|ERN10502.1| hypothetical
protein AMTR_s02100p00009220, partial [Amborella
trichopoda]
Length = 183
Score = 67.4 bits (163), Expect(2) = 3e-21
Identities = 30/48 (62%), Positives = 35/48 (72%)
Frame = -2
Query: 309 FELGDWVWVHLPKERFPNLHKGKLDARGDGTFQVLEKINDNDTRLIFP 166
FE GDWVW+H+ KERFP + KL RGDG FQVLE+INDN +L P
Sbjct: 44 FEPGDWVWLHMRKERFPTQRRSKLLPRGDGPFQVLERINDNAYKLDLP 91
Score = 60.1 bits (144), Expect(2) = 3e-21
Identities = 33/61 (54%), Positives = 38/61 (62%)
Frame = -1
Query: 184 YKIDLSDEYNVSATFNVSYLSPFDADKDLRINHFKGGADGMTRDAQEAVDLFQGPTRRAR 5
YK+DL EYNVSATFNVS LSPFD +DLR N K G + Q + + GP RAR
Sbjct: 86 YKLDLPGEYNVSATFNVSDLSPFDTGEDLRTNPSKEGGNDEDIKDQVSSPIPVGPVTRAR 145
Query: 4 A 2
A
Sbjct: 146 A 146
>emb|CAN77247.1| hypothetical protein VITISV_021658 [Vitis vinifera]
Length = 1323
Score = 69.7 bits (169), Expect(2) = 6e-20
Identities = 31/48 (64%), Positives = 35/48 (72%)
Frame = -2
Query: 309 FELGDWVWVHLPKERFPNLHKGKLDARGDGTFQVLEKINDNDTRLIFP 166
FE GDWVWVH+ KERFP + KL RGDG FQVLE+INDN +L P
Sbjct: 1178 FEPGDWVWVHMRKERFPTRRRSKLHPRGDGPFQVLERINDNAYKLDLP 1225
Score = 53.1 bits (126), Expect(2) = 6e-20
Identities = 28/62 (45%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Frame = -1
Query: 184 YKIDLSDEYNVSATFNVSYLSPFDADKDLRINHF-KGGADGMTRDAQEAVDLFQGPTRRA 8
YK+DL EYN+SATFNV LSPFD D R N F + G D + ++ + + GP +A
Sbjct: 1220 YKLDLPXEYNISATFNVXDLSPFDVGDDSRTNPFEESGNDENQQAFKDPLHVXXGPITKA 1279
Query: 7 RA 2
R+
Sbjct: 1280 RS 1281
>emb|CAN74973.1| hypothetical protein VITISV_001042 [Vitis vinifera]
Length = 1281
Score = 68.6 bits (166), Expect(2) = 5e-19
Identities = 31/48 (64%), Positives = 34/48 (70%)
Frame = -2
Query: 309 FELGDWVWVHLPKERFPNLHKGKLDARGDGTFQVLEKINDNDTRLIFP 166
FE GDWVWVH+ KERFP KL RGDG FQVLE+INDN +L P
Sbjct: 1157 FEPGDWVWVHMRKERFPTRRXSKLHPRGDGPFQVLERINDNAYKLDIP 1204
Score = 51.2 bits (121), Expect(2) = 5e-19
Identities = 27/62 (43%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Frame = -1
Query: 184 YKIDLSDEYNVSATFNVSYLSPFDADKDLRINHF-KGGADGMTRDAQEAVDLFQGPTRRA 8
YK+D+ EYN+SATFNVS LSPFD D N F + G D + ++ + + GP +A
Sbjct: 1199 YKLDIPGEYNISATFNVSDLSPFDVGDDSXTNPFEEKGNDENQQAFKDPLHVLVGPITKA 1258
Query: 7 RA 2
R+
Sbjct: 1259 RS 1260
>emb|CAN76474.1| hypothetical protein VITISV_016008 [Vitis vinifera]
Length = 519
Score = 66.6 bits (161), Expect(2) = 4e-18
Identities = 30/48 (62%), Positives = 34/48 (70%)
Frame = -2
Query: 309 FELGDWVWVHLPKERFPNLHKGKLDARGDGTFQVLEKINDNDTRLIFP 166
FE GDWVWVH+ K RFP + KL RGDG FQVLE+INDN +L P
Sbjct: 374 FEPGDWVWVHIRKGRFPTCXQSKLHPRGDGPFQVLERINDNAYKLDLP 421
Score = 50.1 bits (118), Expect(2) = 4e-18
Identities = 28/62 (45%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Frame = -1
Query: 184 YKIDLSDEYNVSATFNVSYLSPFDADKDLRINHF-KGGADGMTRDAQEAVDLFQGPTRRA 8
YK+DL EYN+SAT NVS LSPFD D R N F + G D + ++ + + GP +A
Sbjct: 416 YKLDLPGEYNISATVNVSDLSPFDVGDDSRTNPFEERGNDENQQAFKDPLHVPVGPITKA 475
Query: 7 RA 2
R+
Sbjct: 476 RS 477
>emb|CAN68499.1| hypothetical protein VITISV_041099 [Vitis vinifera]
Length = 1115
Score = 65.1 bits (157), Expect(2) = 5e-18
Identities = 30/48 (62%), Positives = 34/48 (70%)
Frame = -2
Query: 309 FELGDWVWVHLPKERFPNLHKGKLDARGDGTFQVLEKINDNDTRLIFP 166
FE GDWV VH+ KERFP + KL RGDG FQVLE+INDN +L P
Sbjct: 1002 FEPGDWVXVHMRKERFPTCRQSKLHPRGDGPFQVLERINDNAYKLDLP 1049
Score = 51.2 bits (121), Expect(2) = 5e-18
Identities = 29/62 (46%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Frame = -1
Query: 184 YKIDLSDEYNVSATFNVSYLSPFDADKDLRINHF-KGGADGMTRDAQEAVDLFQGPTRRA 8
YK+DL EYN+SATFNVS LSPFD D R N F K G D + + + + P +A
Sbjct: 1044 YKLDLPGEYNISATFNVSDLSPFDVSDDSRTNPFEKRGNDENQQAFNDPLHVPVEPITKA 1103
Query: 7 RA 2
R+
Sbjct: 1104 RS 1105
>ref|XP_006606762.1| PREDICTED: uncharacterized protein LOC102662828 [Glycine max]
Length = 612
Score = 70.1 bits (170), Expect(2) = 1e-17
Identities = 32/47 (68%), Positives = 34/47 (72%)
Frame = -2
Query: 306 ELGDWVWVHLPKERFPNLHKGKLDARGDGTFQVLEKINDNDTRLIFP 166
E GDWVWVHL KERFP K KL RGDG FQVLEKINDN ++ P
Sbjct: 535 EPGDWVWVHLKKERFPEHRKSKLQPRGDGPFQVLEKINDNAYKIDLP 581
Score = 45.1 bits (105), Expect(2) = 1e-17
Identities = 22/26 (84%), Positives = 23/26 (88%)
Frame = -1
Query: 184 YKIDLSDEYNVSATFNVSYLSPFDAD 107
YKIDL +EYNVSATFNVS LS FDAD
Sbjct: 576 YKIDLPNEYNVSATFNVSDLSLFDAD 601
>emb|CAN77900.1| hypothetical protein VITISV_037350 [Vitis vinifera]
Length = 1173
Score = 68.2 bits (165), Expect(2) = 2e-17
Identities = 30/45 (66%), Positives = 34/45 (75%)
Frame = -2
Query: 309 FELGDWVWVHLPKERFPNLHKGKLDARGDGTFQVLEKINDNDTRL 175
FE GDWVWVH+ KERFP + KL RGDG FQVLE+INDN +L
Sbjct: 1050 FESGDWVWVHMRKERFPTRRQSKLHPRGDGPFQVLERINDNAYKL 1094
Score = 46.6 bits (109), Expect(2) = 2e-17
Identities = 26/62 (41%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Frame = -1
Query: 184 YKIDLSDEYNVSATFNVSYLSPFDADKDLRINHF-KGGADGMTRDAQEAVDLFQGPTRRA 8
YK+DL EYN+SATF VS LSPF+ D R N F + G D + ++ + + P +A
Sbjct: 1092 YKLDLLGEYNISATFKVSDLSPFNVGDDSRTNPFEERGNDENQQAFKDPLHVLVEPITKA 1151
Query: 7 RA 2
R+
Sbjct: 1152 RS 1153
>ref|XP_006490837.1| PREDICTED: uncharacterized protein LOC102624555 [Citrus sinensis]
Length = 821
Score = 63.2 bits (152), Expect(2) = 2e-17
Identities = 28/48 (58%), Positives = 34/48 (70%)
Frame = -2
Query: 309 FELGDWVWVHLPKERFPNLHKGKLDARGDGTFQVLEKINDNDTRLIFP 166
F+ GDWVWVH+ KERFP + KL RGDG FQV+ +INDN +L P
Sbjct: 403 FQPGDWVWVHMRKERFPAQRRSKLLPRGDGPFQVVARINDNAYKLDLP 450
Score = 51.2 bits (121), Expect(2) = 2e-17
Identities = 28/64 (43%), Positives = 37/64 (57%), Gaps = 5/64 (7%)
Frame = -1
Query: 184 YKIDLSDEYNVSATFNVSYLSPFDADKDLRINHFKGGAD-----GMTRDAQEAVDLFQGP 20
YK+DL EYNV ATFNVS LSPFD +D R N F+ + G + + + + + GP
Sbjct: 445 YKLDLPGEYNVIATFNVSDLSPFDVGEDSRTNPFEERGNDENHQGTIKTSSDPLHIHGGP 504
Query: 19 TRRA 8
RA
Sbjct: 505 ITRA 508
>ref|XP_004515184.1| PREDICTED: uncharacterized protein LOC101510243 [Cicer arietinum]
Length = 593
Score = 70.1 bits (170), Expect(2) = 3e-16
Identities = 32/48 (66%), Positives = 35/48 (72%)
Frame = -2
Query: 309 FELGDWVWVHLPKERFPNLHKGKLDARGDGTFQVLEKINDNDTRLIFP 166
FE GDWVWVHL KERFP+ K KL RGDG FQVL KINDN ++ P
Sbjct: 442 FEPGDWVWVHLRKERFPSQMKSKLQPRGDGPFQVLSKINDNAYKIDLP 489
Score = 40.4 bits (93), Expect(2) = 3e-16
Identities = 29/70 (41%), Positives = 40/70 (57%), Gaps = 9/70 (12%)
Frame = -1
Query: 184 YKIDLSDEYNVSATFNVSYLSPFDA---DKDLRINHFKGGADGMTRDA---QEAVDLFQG 23
YKIDL EY VS TFNV+ LS +DA D +LR N + G + + +E+++ QG
Sbjct: 484 YKIDLPGEYGVSLTFNVADLSLYDAAEEDCNLRANSVQEGGNDEDIECITKEESLEDIQG 543
Query: 22 ---PTRRARA 2
P RAR+
Sbjct: 544 LGTPMTRARS 553
>gb|AAV88076.1| putative retrotransposon polyprotein [Ipomoea batatas]
Length = 1358
Score = 66.2 bits (160), Expect(2) = 1e-15
Identities = 29/45 (64%), Positives = 33/45 (73%)
Frame = -2
Query: 309 FELGDWVWVHLPKERFPNLHKGKLDARGDGTFQVLEKINDNDTRL 175
F+ GDWVW+H K RFPN K KL RGDG FQVLE+INDN +L
Sbjct: 1200 FKPGDWVWIHYSKNRFPNQRKSKLMPRGDGPFQVLERINDNAYKL 1244
Score = 42.4 bits (98), Expect(2) = 1e-15
Identities = 24/63 (38%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Frame = -1
Query: 184 YKIDLSDEYNVSATFNVSYLSPFDADKDLRINHFKGGADGMT--RDAQEAVDLFQGPTRR 11
YK+DL E++VS+TFNV+ L+PFD D N F+ G D T + + + + GP R
Sbjct: 1242 YKLDLRGEHSVSSTFNVADLAPFDF-SDSGTNLFQEGEDDETGMQQINDPLKVSSGPVTR 1300
Query: 10 ARA 2
+++
Sbjct: 1301 SKS 1303
>emb|CAN67751.1| hypothetical protein VITISV_030106 [Vitis vinifera]
Length = 376
Score = 56.6 bits (135), Expect(2) = 4e-15
Identities = 26/45 (57%), Positives = 32/45 (71%)
Frame = -2
Query: 309 FELGDWVWVHLPKERFPNLHKGKLDARGDGTFQVLEKINDNDTRL 175
FE DWVW+H+ KERFP + KL RG+ FQVLE+INDN +L
Sbjct: 273 FEPEDWVWLHMRKERFPAQRQSKLLLRGNEPFQVLERINDNAYKL 317
Score = 50.1 bits (118), Expect(2) = 4e-15
Identities = 29/61 (47%), Positives = 35/61 (57%), Gaps = 3/61 (4%)
Frame = -1
Query: 184 YKIDLSDEYNVSATFNVSYLSPFDADKDLRINHF--KGGADGMTRDAQE-AVDLFQGPTR 14
YK+DL EYNV ATFNV+ LSPFD DLR N F +G +G T + + GP
Sbjct: 315 YKLDLLGEYNVKATFNVTDLSPFDVGDDLRRNPFQDEGNDEGTTNKWNTYPIQVLVGPVT 374
Query: 13 R 11
R
Sbjct: 375 R 375
>ref|XP_006580738.1| PREDICTED: uncharacterized protein LOC102669923 [Glycine max]
Length = 188
Score = 61.6 bits (148), Expect(2) = 1e-14
Identities = 27/47 (57%), Positives = 33/47 (70%)
Frame = -2
Query: 306 ELGDWVWVHLPKERFPNLHKGKLDARGDGTFQVLEKINDNDTRLIFP 166
E GDWVWVH+ KERFP K L RGD +FQVLE++NDN ++ P
Sbjct: 73 EPGDWVWVHMRKERFPKQRKYTLQPRGDESFQVLERLNDNAYKIDIP 119
Score = 43.5 bits (101), Expect(2) = 1e-14
Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Frame = -1
Query: 184 YKIDLSDEYNVSATFNVSYLSPF---DADKDLRINHFKGGADGMTRDAQEAVDLFQGPTR 14
YKID+ EY VS++FNV+ ++PF D +DLR N F+ G + D + Q P
Sbjct: 114 YKIDIPGEYGVSSSFNVADMTPFVAGDDSEDLRANAFQEGGN----DENPKIAQIQEPMT 169
Query: 13 RAR 5
R+R
Sbjct: 170 RSR 172
>gb|AAW28578.1| Putative gag-pol polyprotein, identical [Solanum demissum]
Length = 1588
Score = 59.3 bits (142), Expect(2) = 2e-14
Identities = 27/48 (56%), Positives = 34/48 (70%)
Frame = -2
Query: 309 FELGDWVWVHLPKERFPNLHKGKLDARGDGTFQVLEKINDNDTRLIFP 166
F+ GD VWVH+ KERFP+ K KLD RG G ++VLE+I DN +L P
Sbjct: 1430 FKPGDLVWVHMRKERFPSKRKTKLDPRGSGPYKVLERIGDNAYKLDLP 1477
Score = 45.1 bits (105), Expect(2) = 2e-14
Identities = 26/67 (38%), Positives = 38/67 (56%), Gaps = 7/67 (10%)
Frame = -1
Query: 184 YKIDLSDEYNVSATFNVSYLSPFDADKDLRINHFK-------GGADGMTRDAQEAVDLFQ 26
YK+DL E+ VSATFNVS LS +DAD D R N + G+ +D +A++ +
Sbjct: 1472 YKLDLPGEFQVSATFNVSDLSHYDADLDSRTNSLQEEGNDSIQGSSTPLKDKDDALETPR 1531
Query: 25 GPTRRAR 5
P R++
Sbjct: 1532 RPITRSQ 1538
>gb|AAW28577.1| Putative gag-pol polyprotein, identical [Solanum demissum]
Length = 1588
Score = 59.3 bits (142), Expect(2) = 2e-14
Identities = 27/48 (56%), Positives = 34/48 (70%)
Frame = -2
Query: 309 FELGDWVWVHLPKERFPNLHKGKLDARGDGTFQVLEKINDNDTRLIFP 166
F+ GD VWVH+ KERFP+ K KLD RG G ++VLE+I DN +L P
Sbjct: 1430 FKPGDLVWVHMRKERFPSKRKTKLDPRGSGPYKVLERIGDNAYKLDLP 1477
Score = 45.1 bits (105), Expect(2) = 2e-14
Identities = 26/67 (38%), Positives = 38/67 (56%), Gaps = 7/67 (10%)
Frame = -1
Query: 184 YKIDLSDEYNVSATFNVSYLSPFDADKDLRINHFK-------GGADGMTRDAQEAVDLFQ 26
YK+DL E+ VSATFNVS LS +DAD D R N + G+ +D +A++ +
Sbjct: 1472 YKLDLPGEFQVSATFNVSDLSHYDADLDSRTNSLQEEGNDSIQGSSTPLKDKDDALETPR 1531
Query: 25 GPTRRAR 5
P R++
Sbjct: 1532 RPITRSQ 1538
>gb|AAW28576.2| Gag-pol polyprotein, putative [Solanum demissum]
Length = 1096
Score = 59.3 bits (142), Expect(2) = 2e-14
Identities = 27/48 (56%), Positives = 34/48 (70%)
Frame = -2
Query: 309 FELGDWVWVHLPKERFPNLHKGKLDARGDGTFQVLEKINDNDTRLIFP 166
F+ GD VWVH+ KERFP+ K KLD RG G ++VLE+I DN +L P
Sbjct: 938 FKPGDLVWVHMRKERFPSKRKTKLDPRGSGPYKVLERIGDNAYKLDLP 985
Score = 45.1 bits (105), Expect(2) = 2e-14
Identities = 26/67 (38%), Positives = 38/67 (56%), Gaps = 7/67 (10%)
Frame = -1
Query: 184 YKIDLSDEYNVSATFNVSYLSPFDADKDLRINHFK-------GGADGMTRDAQEAVDLFQ 26
YK+DL E+ VSATFNVS LS +DAD D R N + G+ +D +A++ +
Sbjct: 980 YKLDLPGEFQVSATFNVSDLSHYDADLDSRTNSLQEEGNDSIQGSSTPLKDKDDALETPR 1039
Query: 25 GPTRRAR 5
P R++
Sbjct: 1040 RPITRSQ 1046
>gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1713
Score = 61.6 bits (148), Expect(2) = 1e-13
Identities = 29/48 (60%), Positives = 33/48 (68%)
Frame = -2
Query: 309 FELGDWVWVHLPKERFPNLHKGKLDARGDGTFQVLEKINDNDTRLIFP 166
FE GD VWVHL K+RFP K KL RGDG F+VL KINDN ++ P
Sbjct: 1480 FEPGDLVWVHLRKDRFPQKRKSKLMPRGDGPFRVLSKINDNAYKIELP 1527
Score = 39.7 bits (91), Expect(2) = 1e-13
Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 14/75 (18%)
Frame = -1
Query: 184 YKIDLSDEYNVSATFNVSYLSPF---DADKDLRINHFKGGAD-----------GMTRDAQ 47
YKI+L ++Y VS+TFNV+ L+PF + + R F+ G D + +
Sbjct: 1522 YKIELPEDYGVSSTFNVADLTPFFGLEDSESSRSTPFQEGEDDEDIPTVHATSSTKQPSS 1581
Query: 46 EAVDLFQGPTRRARA 2
D QGP R+RA
Sbjct: 1582 NTKDTIQGPLTRSRA 1596
>gb|AAT85159.1| unknown protein [Oryza sativa Japonica Group]
gi|52353557|gb|AAU44123.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 681
Score = 61.6 bits (148), Expect(2) = 2e-13
Identities = 29/48 (60%), Positives = 33/48 (68%)
Frame = -2
Query: 309 FELGDWVWVHLPKERFPNLHKGKLDARGDGTFQVLEKINDNDTRLIFP 166
FE GD VWVHL K+RFP K KL RGDG F+VL KINDN ++ P
Sbjct: 448 FEPGDLVWVHLRKDRFPQKRKSKLMPRGDGPFRVLSKINDNAYKIELP 495
Score = 39.7 bits (91), Expect(2) = 2e-13
Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 14/75 (18%)
Frame = -1
Query: 184 YKIDLSDEYNVSATFNVSYLSPF---DADKDLRINHFKGGAD-----------GMTRDAQ 47
YKI+L ++Y VS+TFNV+ L+PF + + R F+ G D + +
Sbjct: 490 YKIELPEDYGVSSTFNVADLTPFFGLEDSESSRSTPFQEGEDDEDIPTVHATSSTKQPSS 549
Query: 46 EAVDLFQGPTRRARA 2
D QGP R+RA
Sbjct: 550 NTKDTIQGPLTRSRA 564
>ref|XP_006591601.1| PREDICTED: uncharacterized protein LOC102659801 [Glycine max]
Length = 218
Score = 57.0 bits (136), Expect(2) = 2e-13
Identities = 27/47 (57%), Positives = 31/47 (65%)
Frame = -2
Query: 306 ELGDWVWVHLPKERFPNLHKGKLDARGDGTFQVLEKINDNDTRLIFP 166
E DWVWVH+ KERF K KL RGD FQVLEKI+DN ++ P
Sbjct: 120 EPSDWVWVHMRKERFLEQRKPKLQHRGDEPFQVLEKISDNAYKIDIP 166
Score = 44.3 bits (103), Expect(2) = 2e-13
Identities = 26/50 (52%), Positives = 34/50 (68%), Gaps = 4/50 (8%)
Frame = -1
Query: 184 YKIDLSDEYNVSATFNVSYLSPFDAD---KDLRINHF-KGGADGMTRDAQ 47
YKID+ EY VS++FNV+ L+PF AD +DLR N F +GG D + AQ
Sbjct: 161 YKIDIPGEYGVSSSFNVADLTPFFADGDFEDLRANTFQEGGNDENPKAAQ 210
>gb|AAQ56407.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
Length = 1619
Score = 66.6 bits (161), Expect(2) = 3e-13
Identities = 31/48 (64%), Positives = 35/48 (72%)
Frame = -2
Query: 309 FELGDWVWVHLPKERFPNLHKGKLDARGDGTFQVLEKINDNDTRLIFP 166
FE GD VW+HL K+RFPNL K KL R DG FQVL+KINDN +L P
Sbjct: 1401 FEPGDLVWLHLRKDRFPNLRKSKLPPRADGPFQVLQKINDNAYKLELP 1448
Score = 33.9 bits (76), Expect(2) = 3e-13
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Frame = -1
Query: 184 YKIDLSDEYNVSATFNVSYLSPFDADKD---LRINHFKGGADGMTRDAQEAVDLF--QGP 20
YK++L ++ VS TFN++ L P+ ++D R + G D + + QGP
Sbjct: 1443 YKLELPADFGVSPTFNIADLKPYLGEEDELESRTTQMQEGEDDEDIPSNDTTTPIAQQGP 1502
Query: 19 TRRARA 2
RARA
Sbjct: 1503 MTRARA 1508
>ref|XP_006380063.1| hypothetical protein POPTR_0008s20820g [Populus trichocarpa]
gi|550333562|gb|ERP57860.1| hypothetical protein
POPTR_0008s20820g [Populus trichocarpa]
Length = 826
Score = 63.2 bits (152), Expect(2) = 3e-13
Identities = 28/48 (58%), Positives = 34/48 (70%)
Frame = -2
Query: 309 FELGDWVWVHLPKERFPNLHKGKLDARGDGTFQVLEKINDNDTRLIFP 166
F+ GDWVWV++ KERF N K KL GDG FQVLE+INDN ++ P
Sbjct: 33 FQPGDWVWVYMRKERFSNQRKSKLQPCGDGPFQVLERINDNAYKIDIP 80
Score = 37.4 bits (85), Expect(2) = 3e-13
Identities = 19/35 (54%), Positives = 22/35 (62%)
Frame = -1
Query: 184 YKIDLSDEYNVSATFNVSYLSPFDADKDLRINHFK 80
YKID+ EY VSA FNV+ L+ FD D D R K
Sbjct: 75 YKIDIPGEYGVSAIFNVADLTLFDIDFDSRRRDLK 109