BLASTX nr result

ID: Catharanthus22_contig00016191 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00016191
         (318 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003588337.1| Ribosomal protein S10 [Medicago truncatula] ...    99   4e-19
ref|YP_173386.1| hypothetical protein NitaMp040 [Nicotiana tabac...    55   5e-16
ref|XP_002535169.1| conserved hypothetical protein [Ricinus comm...    84   1e-14

>ref|XP_003588337.1| Ribosomal protein S10 [Medicago truncatula]
           gi|355477385|gb|AES58588.1| Ribosomal protein S10
           [Medicago truncatula]
          Length = 1152

 Score = 99.4 bits (246), Expect = 4e-19
 Identities = 46/48 (95%), Positives = 47/48 (97%), Gaps = 1/48 (2%)
 Frame = -1

Query: 153 HF-PSCSSIGNQDKPGTTVRRENTRSHSDLDMWNRLAPYVLRLFGRHG 13
           HF PSCSSIGNQDKPGTTVRRENTRSHSDLDMWNRLAPYVL+LFGRHG
Sbjct: 556 HFVPSCSSIGNQDKPGTTVRRENTRSHSDLDMWNRLAPYVLKLFGRHG 603


>ref|YP_173386.1| hypothetical protein NitaMp040 [Nicotiana tabacum]
           gi|56806549|dbj|BAD83450.1| hypothetical protein
           (mitochondrion) [Nicotiana tabacum]
          Length = 108

 Score = 55.1 bits (131), Expect(3) = 5e-16
 Identities = 27/31 (87%), Positives = 29/31 (93%), Gaps = 1/31 (3%)
 Frame = +1

Query: 166 FVTRPRLRVLWTLRPPATSGSKLAP-VGERG 255
           F+TRPRLRVLWTLRPPATSGSKLAP VG+ G
Sbjct: 11  FLTRPRLRVLWTLRPPATSGSKLAPYVGKLG 41



 Score = 50.8 bits (120), Expect(3) = 5e-16
 Identities = 23/26 (88%), Positives = 25/26 (96%)
 Frame = +2

Query: 239 RLGKEGISIAKDSIQPQVPLRLPCYD 316
           +LG+E ISIAKDSIQPQVPLRLPCYD
Sbjct: 39  KLGEECISIAKDSIQPQVPLRLPCYD 64



 Score = 23.5 bits (49), Expect(3) = 5e-16
 Identities = 10/15 (66%), Positives = 10/15 (66%)
 Frame = +3

Query: 135 MNKKENGTF*FCDSP 179
           MNKKENGT  F   P
Sbjct: 1   MNKKENGTILFLTRP 15


>ref|XP_002535169.1| conserved hypothetical protein [Ricinus communis]
           gi|223523841|gb|EEF27214.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 84

 Score = 84.3 bits (207), Expect = 1e-14
 Identities = 40/44 (90%), Positives = 42/44 (95%)
 Frame = +1

Query: 1   HRACTMSPEQSQYIWRKTIPHIEVGMGSGVFTSHRSARFVLISD 132
           +RA TMSPEQSQYIWRKTIPHIEVGMGSGVFTS+RSARFVLI D
Sbjct: 41  YRAWTMSPEQSQYIWRKTIPHIEVGMGSGVFTSYRSARFVLIPD 84


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