BLASTX nr result
ID: Catharanthus22_contig00016132
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00016132
(1259 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AEL30359.1| RNA-directed DNA polymerase [Arachis hypogaea] 95 7e-17
emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulga... 92 6e-16
emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga... 91 1e-15
emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulga... 88 6e-15
gb|ABO80476.1| RNA-directed DNA polymerase , related [Medicago t... 87 1e-14
emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulga... 87 1e-14
gb|EMJ08972.1| hypothetical protein PRUPE_ppa026368mg, partial [... 87 2e-14
gb|EPS72636.1| hypothetical protein M569_02121, partial [Genlise... 86 2e-14
gb|EMJ28511.1| hypothetical protein PRUPE_ppa016553mg [Prunus pe... 86 4e-14
gb|EMJ13999.1| hypothetical protein PRUPE_ppa020180mg [Prunus pe... 86 4e-14
gb|ABA98491.1| retrotransposon protein, putative, unclassified [... 84 9e-14
gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japo... 84 9e-14
gb|EEC84982.1| hypothetical protein OsI_32248 [Oryza sativa Indi... 84 9e-14
gb|EMJ00096.1| hypothetical protein PRUPE_ppa015748mg, partial [... 83 2e-13
gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza ... 83 2e-13
gb|AAP53315.2| retrotransposon protein, putative, unclassified [... 83 2e-13
gb|AAF97969.1|AC000103_19 F21J9.30 [Arabidopsis thaliana] 81 2e-13
gb|AAG03119.1|AC004133_13 F5A9.24 [Arabidopsis thaliana] 81 2e-13
emb|CAB10337.1| reverse transcriptase like protein [Arabidopsis ... 83 2e-13
gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa ... 83 3e-13
>gb|AEL30359.1| RNA-directed DNA polymerase [Arachis hypogaea]
Length = 1613
Score = 94.7 bits (234), Expect = 7e-17
Identities = 56/166 (33%), Positives = 85/166 (51%), Gaps = 6/166 (3%)
Frame = +1
Query: 676 VKISRGGPLILHLMFADDLAIFCKATESEAIAITKTSDIFCSWFGQSVNTDKSNTLLQEC 855
V ISRGGP I HLMFADDL +FCKAT+ + + + FC +G +N +KS L +
Sbjct: 1000 VAISRGGPRISHLMFADDLLLFCKATKRQVQNVMLVLETFCKAYGMKINVEKSKALCSKN 1059
Query: 856 *CRGKK------SAALYFSYGRMYTR*HLPGYAFLQRKI*DESFHRIHGKSEKKLSSWKQ 1017
+K S+ ++ Y G ++ +F+ + K +L+SWK
Sbjct: 1060 VSATRKEVFTGISSIIFVQDLGKYL-----GVTLSHSRVTRLAFNGVLDKIRSRLASWKG 1114
Query: 1018 RRLSQAGRVILINSVVQSISQLLMQCFLLPKSIFHKIGAATRDFFW 1155
L++AGR+ L+N VV +I MQ + PK I K+ + R+F W
Sbjct: 1115 SLLNRAGRLCLVNFVVAAIPTYQMQVSIFPKGIISKLESMMRNFLW 1160
>emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1357
Score = 91.7 bits (226), Expect = 6e-16
Identities = 56/185 (30%), Positives = 95/185 (51%), Gaps = 4/185 (2%)
Frame = +1
Query: 613 FSTIVDRRLITRAESQQDIHGVKISRGGPLILHLMFADDLAIFCKATESEAIAITKTSDI 792
FS +V ++++++ +IHG K SR GP I HL+FADD +F +AT E + I +
Sbjct: 658 FSQMVKQKVVSK-----EIHGAKASRNGPEISHLLFADDSLLFTRATRQECLTIVDILNK 712
Query: 793 FCSWFGQSVNTDKSNTLLQEC*CRGKKSAALYFSYGRMYTR*H----LPGYAFLQRKI*D 960
+ + GQ +N +KS KK + + R R +P +K+
Sbjct: 713 YEAASGQKINYEKSEVSFSRGVSCEKKEELITLLHMRQVDRHQKYLGIPALCGRSKKV-- 770
Query: 961 ESFHRIHGKSEKKLSSWKQRRLSQAGRVILINSVVQSISQLLMQCFLLPKSIFHKIGAAT 1140
F + + KKL WK++ LS+AG+ +LI +V+Q++ LM + LP ++ +I +A
Sbjct: 771 -LFRELLDRMWKKLRGWKEKLLSRAGKEVLIKAVIQALPTYLMGVYKLPVAVIQEIHSAM 829
Query: 1141 RDFFW 1155
F+W
Sbjct: 830 ARFWW 834
>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1369
Score = 90.9 bits (224), Expect = 1e-15
Identities = 64/186 (34%), Positives = 87/186 (46%), Gaps = 13/186 (6%)
Frame = +1
Query: 637 LITRAESQQDIHGVKISRGGPLILHLMFADDLAIFCKATESEAIAITKTSDIFCSWFGQS 816
L+ AE ++ IHGVKI I HL FADD +F +ATE E + + + GQ
Sbjct: 663 LLRDAEEKKVIHGVKIGHRVSPISHLFFADDSLLFIRATEEEVENVMDILSTYEAASGQK 722
Query: 817 VNTDKS-------------NTLLQEC*CRGKKSAALYFSYGRMYTR*HLPGYAFLQRKI* 957
+N +KS NTL + + + Y LP + +K
Sbjct: 723 LNMEKSEMSYSRNLEPDKINTLQMKLAFKTVEGHEKYLG---------LPTFIGSSKK-- 771
Query: 958 DESFHRIHGKSEKKLSSWKQRRLSQAGRVILINSVVQSISQLLMQCFLLPKSIFHKIGAA 1137
F I + KKL WK + LSQAGR +LI +V Q+I MQCF++PKSI I
Sbjct: 772 -RVFQAIQDRVWKKLKGWKGKYLSQAGREVLIKAVAQAIPTYAMQCFVIPKSIIDGIEKM 830
Query: 1138 TRDFFW 1155
R+FFW
Sbjct: 831 CRNFFW 836
>emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1355
Score = 88.2 bits (217), Expect = 6e-15
Identities = 55/176 (31%), Positives = 88/176 (50%), Gaps = 2/176 (1%)
Frame = +1
Query: 634 RLITRAESQQDIHGVKISRGGPLILHLMFADDLAIFCKATESEAIAITKTSDIFCSWFGQ 813
++I + ++ +HG K SR GP+I HL FAD +F +A+ E I + +++ GQ
Sbjct: 657 KMIQKKVQEKQLHGAKASRSGPVISHLFFADVSLLFTRASRQECAIIVEILNLYEQASGQ 716
Query: 814 SVNTDKSNTLLQEC*CRGKKSAALYFSYGRMYTR*HLP--GYAFLQRKI*DESFHRIHGK 987
+N DKS + +K + R H+ G + + F + +
Sbjct: 717 KINYDKSEVSFSKGVSIAQKEELSNILQMKQVER-HMKYLGIPSITGRSRTAIFDSLMDR 775
Query: 988 SEKKLSSWKQRRLSQAGRVILINSVVQSISQLLMQCFLLPKSIFHKIGAATRDFFW 1155
KKL WK++ LS+AG+ IL+ SV+Q+I LM + LP SI KI +A F+W
Sbjct: 776 IWKKLQGWKEKLLSRAGKEILLKSVIQAIPTYLMGVYKLPCSIIQKIHSAMARFWW 831
>gb|ABO80476.1| RNA-directed DNA polymerase , related [Medicago truncatula]
Length = 405
Score = 87.4 bits (215), Expect = 1e-14
Identities = 57/179 (31%), Positives = 87/179 (48%), Gaps = 6/179 (3%)
Frame = +1
Query: 637 LITRAESQQDIHGVKISRGGPLILHLMFADDLAIFCKATESEAIAITKTSDIFCSWFGQS 816
LI + ++ DIHGVK+ RG P++ HL+FAD+ +FC+A EA + + + GQ
Sbjct: 42 LIHKEVNRGDIHGVKVCRGAPVVSHLLFADNCFLFCRANVVEAQRLLTILKTYEAASGQE 101
Query: 817 VNTDKSNTLLQEC*CRGKKSAALYFSYGRMYTR*HLPG---YAFLQRKI*DES---FHRI 978
+N KS S A R+ H+ G Y L I + F I
Sbjct: 102 INLSKSEVFFSR-----NMSGAAQEDLSRIIGVRHVMGTGKYLGLPSMIDRDKWSVFSFI 156
Query: 979 HGKSEKKLSSWKQRRLSQAGRVILINSVVQSISQLLMQCFLLPKSIFHKIGAATRDFFW 1155
K+++ W+ R LS+AG+ ++I SV+QSI +M +LLP S+ I F+W
Sbjct: 157 KDSIWKRINVWRGRALSKAGKEVMIKSVLQSIPSYIMSIYLLPSSVIDDIEKMVNAFWW 215
>emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1362
Score = 87.0 bits (214), Expect = 1e-14
Identities = 55/177 (31%), Positives = 87/177 (49%), Gaps = 4/177 (2%)
Frame = +1
Query: 637 LITRAESQQDIHGVKISRGGPLILHLMFADDLAIFCKATESEAIAITKTSDIFCSWFGQS 816
L+++A S++ IHG +I RG P++ HL FADD +F KA+ E + + GQ
Sbjct: 657 LLSKAASEKKIHGAQICRGAPVVSHLFFADDSILFTKASVQECSMVADIISKYERASGQQ 716
Query: 817 VNTDKSNTLLQEC*CRGKKSAALYF----SYGRMYTR*HLPGYAFLQRKI*DESFHRIHG 984
VN K+ + R ++SA + R LP +K+ +F I
Sbjct: 717 VNLSKTEVVFSRSVDRERRSAIVNVLGVKEVDRQEKYLGLPTIIGRSKKV---TFACIKE 773
Query: 985 KSEKKLSSWKQRRLSQAGRVILINSVVQSISQLLMQCFLLPKSIFHKIGAATRDFFW 1155
+ KKL WK++ LS+ G+ +LI SV Q+I +M F LP + +I + F+W
Sbjct: 774 RIWKKLQGWKEKLLSRPGKEVLIKSVAQAIPTYMMSVFSLPSGLIDEIHSLLARFWW 830
>gb|EMJ08972.1| hypothetical protein PRUPE_ppa026368mg, partial [Prunus persica]
Length = 1060
Score = 86.7 bits (213), Expect = 2e-14
Identities = 61/199 (30%), Positives = 93/199 (46%), Gaps = 4/199 (2%)
Frame = +1
Query: 637 LITRAESQQDIHGVKISRGGPLILHLMFADDLAIFCKATESEAIAITKTSDIFCSWFGQS 816
L+ AE + D+ GV+++RG P + HL+FADD +F KAT + +A+ + GQ
Sbjct: 357 LLRGAERRGDLVGVQVARGAPSVTHLLFADDSILFMKATNKDCMALETLFQTYEEVTGQQ 416
Query: 817 VNTDKSNTLLQEC*CRGKKS---AALYFSYGRMYTR*-HLPGYAFLQRKI*DESFHRIHG 984
+N KS L R L R + LP A RK + F +
Sbjct: 417 INYSKSALSLSPNATRADFDMIEGVLNVPVVRCHENYLGLPTIAGKGRK---QLFQHLKD 473
Query: 985 KSEKKLSSWKQRRLSQAGRVILINSVVQSISQLLMQCFLLPKSIFHKIGAATRDFFWTVA 1164
K K +S WK++ LS+AG+ ILI +V+Q+I M CF +PK + ++ F+W A
Sbjct: 474 KLWKHISGWKEKLLSRAGKEILIKAVLQAIPTYSMSCFRIPKGLCKELNGIMARFWWAKA 533
Query: 1165 TIFT*NLGIEFVDQKGSRW 1221
D++G W
Sbjct: 534 K-----------DKRGIHW 541
>gb|EPS72636.1| hypothetical protein M569_02121, partial [Genlisea aurea]
Length = 1503
Score = 86.3 bits (212), Expect = 2e-14
Identities = 61/178 (34%), Positives = 89/178 (50%), Gaps = 9/178 (5%)
Frame = +1
Query: 649 AESQQDIHGVKISRGGPLILHLMFADDLAIFCKATESEAIAITKTSDIFCSW---FGQSV 819
AE Q I G +++R GP I HL FADD IFC+A+ A+++ SDI + GQ V
Sbjct: 997 AEQSQSITGFRVTRRGPSISHLFFADDAMIFCEAS---CAALSRVSDILQDYERASGQKV 1053
Query: 820 NTDKS------NTLLQEC*CRGKKSAALYFSYGRMYTR*HLPGYAFLQRKI*DESFHRIH 981
NT KS NT E + L S+ +Y LP +K F +
Sbjct: 1054 NTHKSAMVFSPNTPDSEKEIWSRGLGFLVKSHHDIYLG--LPSLTGSSKK---RLFSGLL 1108
Query: 982 GKSEKKLSSWKQRRLSQAGRVILINSVVQSISQLLMQCFLLPKSIFHKIGAATRDFFW 1155
+ +K+ W + LSQAG+++LI +V+Q+I M CF LPKS + +A ++W
Sbjct: 1109 ERVNRKIEGWNSKFLSQAGKLVLIKAVLQAIPAYTMSCFALPKSFLGDLQSAISRYWW 1166
>gb|EMJ28511.1| hypothetical protein PRUPE_ppa016553mg [Prunus persica]
Length = 992
Score = 85.5 bits (210), Expect = 4e-14
Identities = 58/178 (32%), Positives = 83/178 (46%), Gaps = 1/178 (0%)
Frame = +1
Query: 637 LITRAESQQDIHGVKISRGGPLILHLMFADDLAIFCKATESEAIAITKTSDIFCSWFGQS 816
LI + E + + GV I RG P I HL FADD +F A ++ +A+ D + GQ
Sbjct: 299 LIAQKEREGFLKGVSICRGAPAISHLFFADDSFLFAWANMADCMALKDILDTYERALGQQ 358
Query: 817 VNTDKSNTLLQEC*CRGKK-SAALYFSYGRMYTR*HLPGYAFLQRKI*DESFHRIHGKSE 993
VN KS + RG + A + + G + K SF+ + +
Sbjct: 359 VNFQKSAVCFSKNVHRGDQLMLAQFMGIPCVDHHSQYLGLPMVLDKKKGASFNHLKERLW 418
Query: 994 KKLSSWKQRRLSQAGRVILINSVVQSISQLLMQCFLLPKSIFHKIGAATRDFFWTVAT 1167
KKL +WK + LS AG+ ILI V Q+I M CFLLPK + + F+W +T
Sbjct: 419 KKLQTWKGKLLSGAGKEILIKVVAQAIPIYTMSCFLLPKYVCEDLNKLVAQFWWNSST 476
>gb|EMJ13999.1| hypothetical protein PRUPE_ppa020180mg [Prunus persica]
Length = 1072
Score = 85.5 bits (210), Expect = 4e-14
Identities = 61/200 (30%), Positives = 92/200 (46%), Gaps = 5/200 (2%)
Frame = +1
Query: 637 LITRAESQQDIHGVKISRGGPLILHLMFADDLAIFCKATESEAIAITKTSDIFCSWFGQS 816
L+ AE + D+ GV+++RG P + HL+FADD +F KAT +A+ + GQ
Sbjct: 607 LLHGAERRGDLVGVQVARGAPSVTHLLFADDSILFMKATNKACMALETLFQTYEEVTGQQ 666
Query: 817 VNTDKSNTLLQEC*CRGKKSAALYFSYGRMYTR*H-----LPGYAFLQRKI*DESFHRIH 981
+N KS L R + R H LP A RK + F +
Sbjct: 667 INYSKSALSLSPNATRADFDM-IEGGLNVPVVRCHENYLGLPTIAGKGRK---QLFQHLK 722
Query: 982 GKSEKKLSSWKQRRLSQAGRVILINSVVQSISQLLMQCFLLPKSIFHKIGAATRDFFWTV 1161
K K +S WK++ LS+AG+ ILI +V+Q+I M CF +PK + ++ F+W
Sbjct: 723 DKLWKHISGWKEKLLSRAGKEILIKAVLQAIPTYSMSCFQIPKGLCKELNGIMARFWWAK 782
Query: 1162 ATIFT*NLGIEFVDQKGSRW 1221
A D++G W
Sbjct: 783 AK-----------DKRGIHW 791
>gb|ABA98491.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1621
Score = 84.3 bits (207), Expect = 9e-14
Identities = 50/175 (28%), Positives = 86/175 (49%), Gaps = 1/175 (0%)
Frame = +1
Query: 637 LITRAESQQDIHGVKISRGGPLILHLMFADDLAIFCKATESEAIAITKTSDIFCSWFGQS 816
L+++ E + +HG++I +G P + HL+FADD I C+A EA + I+ GQ
Sbjct: 910 LLSKTEEEGRLHGIRICQGAPSVSHLLFADDSLILCRANGGEAQQLQTILQIYEECSGQV 969
Query: 817 VNTDKSNTLLQEC*CRGKKSAAL-YFSYGRMYTR*HLPGYAFLQRKI*DESFHRIHGKSE 993
+N DKS + +K A + + R T G + + F + +
Sbjct: 970 INKDKSAVMFSPNTSSLEKRAVMAALNMQRETTNERYLGLPVFVGRSRTKIFSYLKERIW 1029
Query: 994 KKLSSWKQRRLSQAGRVILINSVVQSISQLLMQCFLLPKSIFHKIGAATRDFFWT 1158
+++ WK++ LS+AG+ ILI +V Q+I M CF L K + +I ++W+
Sbjct: 1030 QRIQGWKEKLLSRAGKEILIKAVAQAIPTFAMGCFELTKDLCDQISKMIAKYWWS 1084
>gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japonica Group]
Length = 1594
Score = 84.3 bits (207), Expect = 9e-14
Identities = 50/175 (28%), Positives = 86/175 (49%), Gaps = 1/175 (0%)
Frame = +1
Query: 637 LITRAESQQDIHGVKISRGGPLILHLMFADDLAIFCKATESEAIAITKTSDIFCSWFGQS 816
L+++ E + +HG++I +G P + HL+FADD I C+A EA + I+ GQ
Sbjct: 883 LLSKTEEEGRLHGIRICQGAPSVSHLLFADDSLILCRANGGEAQQLQTILQIYEECSGQV 942
Query: 817 VNTDKSNTLLQEC*CRGKKSAAL-YFSYGRMYTR*HLPGYAFLQRKI*DESFHRIHGKSE 993
+N DKS + +K A + + R T G + + F + +
Sbjct: 943 INKDKSAVMFSPNTSSLEKGAVMAALNMQRETTNEKYLGLPVFVGRSRTKIFSYLKERIW 1002
Query: 994 KKLSSWKQRRLSQAGRVILINSVVQSISQLLMQCFLLPKSIFHKIGAATRDFFWT 1158
+++ WK++ LS+AG+ ILI +V Q+I M CF L K + +I ++W+
Sbjct: 1003 QRIQGWKEKLLSRAGKEILIKAVAQAIPTFAMGCFELTKDLCDQISKMIAKYWWS 1057
>gb|EEC84982.1| hypothetical protein OsI_32248 [Oryza sativa Indica Group]
gi|222630794|gb|EEE62926.1| hypothetical protein
OsJ_17731 [Oryza sativa Japonica Group]
Length = 893
Score = 84.3 bits (207), Expect = 9e-14
Identities = 54/178 (30%), Positives = 89/178 (50%), Gaps = 4/178 (2%)
Frame = +1
Query: 637 LITRAESQQDIHGVKISRGGPLILHLMFADDLAIFCKATESEAIAITKTSDIFCSWFGQS 816
L+ AE + D+ GVK+ + P + HL+FADD + K E A + +++ S GQ
Sbjct: 329 LLYAAEERGDLSGVKVCQQAPSVSHLLFADDSLLLFKVNERSAQCLQNVLNLYESCSGQI 388
Query: 817 VNTDKSNTLLQEC*CRGKKSAALYF----SYGRMYTR*HLPGYAFLQRKI*DESFHRIHG 984
VN DKS+ + + + + + + R LP Y R ++F +
Sbjct: 389 VNKDKSSIMFSKNTSQADRKMVMEILDISTEARNEKYLGLPVYMGRSRA---KTFAYLKE 445
Query: 985 KSEKKLSSWKQRRLSQAGRVILINSVVQSISQLLMQCFLLPKSIFHKIGAATRDFFWT 1158
+ KK+ WK++ LS+AG+ ILI +V Q+I M CF L K++ +I A +FW+
Sbjct: 446 RVWKKIQGWKEKLLSKAGKDILIKAVAQAIPTFAMSCFDLTKTLCDEISAIICRYFWS 503
>gb|EMJ00096.1| hypothetical protein PRUPE_ppa015748mg, partial [Prunus persica]
Length = 949
Score = 83.2 bits (204), Expect = 2e-13
Identities = 54/178 (30%), Positives = 85/178 (47%), Gaps = 5/178 (2%)
Frame = +1
Query: 637 LITRAESQQDIHGVKISRGGPLILHLMFADDLAIFCKATESEAIAITKTSDIFCSWFGQS 816
LI ++ +HG+K+S P + HL+FADD +FCKA+E E + D++ GQ
Sbjct: 459 LIQHFAGRELLHGIKVSSSSPPLSHLLFADDSILFCKASEGEMDMVKHVLDLYAKGSGQQ 518
Query: 817 VNTDKSNTLL-----QEC*CRGKKSAALYFSYGRMYTR*HLPGYAFLQRKI*DESFHRIH 981
VN DKS+ QE R + + +L GR + + + F K E F I
Sbjct: 519 VNFDKSSLFFSTNCSQE--TRDRLARSLNIPQGRGFGKYLGLKFEFGHSK--KEVFEEIR 574
Query: 982 GKSEKKLSSWKQRRLSQAGRVILINSVVQSISQLLMQCFLLPKSIFHKIGAATRDFFW 1155
K ++ W + L+ AG +L+ +V ++ M CFLL + + I A F+W
Sbjct: 575 EKVATRVHGWAENFLTTAGNEVLLKAVALALPTYTMFCFLLSQGVCADILRALSSFWW 632
>gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza sativa Japonica Group]
Length = 1509
Score = 83.2 bits (204), Expect = 2e-13
Identities = 50/175 (28%), Positives = 85/175 (48%), Gaps = 1/175 (0%)
Frame = +1
Query: 637 LITRAESQQDIHGVKISRGGPLILHLMFADDLAIFCKATESEAIAITKTSDIFCSWFGQS 816
L+++ E + +HG++I +G P + HL+FADD I C+A EA + I+ GQ
Sbjct: 855 LLSKTEEEGRLHGIRICQGAPSVSHLLFADDSLILCRANGGEAQQLQTILQIYEECSGQV 914
Query: 817 VNTDKSNTLLQEC*CRGKKSAAL-YFSYGRMYTR*HLPGYAFLQRKI*DESFHRIHGKSE 993
+N DKS + +K A + + R T G + + F + +
Sbjct: 915 INKDKSAVMFSPNTSSLEKGAVMAALNMQRETTNEKYLGLPVFVGRSRTKIFSYLKERIW 974
Query: 994 KKLSSWKQRRLSQAGRVILINSVVQSISQLLMQCFLLPKSIFHKIGAATRDFFWT 1158
+++ WK++ LS+AG+ ILI +V Q I M CF L K + +I ++W+
Sbjct: 975 QRIQGWKEKLLSRAGKEILIKAVAQVIPTFAMGCFELTKDLCDQISKMIAKYWWS 1029
>gb|AAP53315.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1505
Score = 83.2 bits (204), Expect = 2e-13
Identities = 50/175 (28%), Positives = 85/175 (48%), Gaps = 1/175 (0%)
Frame = +1
Query: 637 LITRAESQQDIHGVKISRGGPLILHLMFADDLAIFCKATESEAIAITKTSDIFCSWFGQS 816
L+++ E + +HG++I +G P + HL+FADD I C+A EA + I+ GQ
Sbjct: 851 LLSKTEEEGRLHGIRICQGAPSVSHLLFADDSLILCRANGGEAQQLQTILQIYEECSGQV 910
Query: 817 VNTDKSNTLLQEC*CRGKKSAAL-YFSYGRMYTR*HLPGYAFLQRKI*DESFHRIHGKSE 993
+N DKS + +K A + + R T G + + F + +
Sbjct: 911 INKDKSAVMFSPNTSSLEKGAVMAALNMQRETTNEKYLGLPVFVGRSRTKIFSYLKERIW 970
Query: 994 KKLSSWKQRRLSQAGRVILINSVVQSISQLLMQCFLLPKSIFHKIGAATRDFFWT 1158
+++ WK++ LS+AG+ ILI +V Q I M CF L K + +I ++W+
Sbjct: 971 QRIQGWKEKLLSRAGKEILIKAVAQVIPTFAMGCFELTKDLCDQISKMIAKYWWS 1025
>gb|AAF97969.1|AC000103_19 F21J9.30 [Arabidopsis thaliana]
Length = 1270
Score = 81.3 bits (199), Expect(3) = 2e-13
Identities = 50/177 (28%), Positives = 88/177 (49%), Gaps = 4/177 (2%)
Frame = +1
Query: 637 LITRAESQQDIHGVKISRGGPLILHLMFADDLAIFCKATESEAIAITKTSDIFCSWFGQS 816
L+ +A+ + + G++ S GP++ HL+FADD CKA+ +++ + K ++ + GQ+
Sbjct: 617 LLNKAQWEGALEGIQFSENGPMVHHLLFADDSLFLCKASREQSLVLQKILKVYGNATGQT 676
Query: 817 VNTDKSNTLLQEC*CRGKKSAAL----YFSYGRMYTR*HLPGYAFLQRKI*DESFHRIHG 984
+N +KS+ E K F+ G T LP F K+ + H +
Sbjct: 677 INLNKSSITFGEKVDEQLKGTIRTCLGIFTEGGAGTYLGLP-ECFSGSKV--DMLHYLKD 733
Query: 985 KSEKKLSSWKQRRLSQAGRVILINSVVQSISQLLMQCFLLPKSIFHKIGAATRDFFW 1155
+ ++KL W R LSQ G+ +L+ SV ++ M CF LP + + +A F+W
Sbjct: 734 RLKEKLDVWFTRCLSQGGKEVLLKSVALAMPVFAMSCFKLPITTCENLESAMASFWW 790
Score = 20.8 bits (42), Expect(3) = 2e-13
Identities = 6/18 (33%), Positives = 11/18 (61%)
Frame = +3
Query: 1155 DSGHHLYLKSWDRICRSK 1208
D ++ +SW+R+C K
Sbjct: 794 DHSRKIHWQSWERLCLPK 811
Score = 20.8 bits (42), Expect(3) = 2e-13
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = +2
Query: 1202 IKKEAGGLGFR 1234
+ K++GGLGFR
Sbjct: 809 LPKDSGGLGFR 819
>gb|AAG03119.1|AC004133_13 F5A9.24 [Arabidopsis thaliana]
Length = 1254
Score = 81.3 bits (199), Expect(3) = 2e-13
Identities = 50/177 (28%), Positives = 88/177 (49%), Gaps = 4/177 (2%)
Frame = +1
Query: 637 LITRAESQQDIHGVKISRGGPLILHLMFADDLAIFCKATESEAIAITKTSDIFCSWFGQS 816
L+ +A+ + + G++ S GP++ HL+FADD CKA+ +++ + K ++ + GQ+
Sbjct: 620 LLNKAQWEGALEGIQFSENGPMVHHLLFADDSLFLCKASREQSLVLQKILKVYGNATGQT 679
Query: 817 VNTDKSNTLLQEC*CRGKKSAAL----YFSYGRMYTR*HLPGYAFLQRKI*DESFHRIHG 984
+N +KS+ E K F+ G T LP F K+ + H +
Sbjct: 680 INLNKSSITFGEKVDEQLKGTIRTCLGIFTEGGAGTYLGLP-ECFSGSKV--DMLHYLKD 736
Query: 985 KSEKKLSSWKQRRLSQAGRVILINSVVQSISQLLMQCFLLPKSIFHKIGAATRDFFW 1155
+ ++KL W R LSQ G+ +L+ SV ++ M CF LP + + +A F+W
Sbjct: 737 RLKEKLDVWFTRCLSQGGKEVLLKSVALAMPVFAMSCFKLPITTCENLESAMASFWW 793
Score = 20.8 bits (42), Expect(3) = 2e-13
Identities = 6/18 (33%), Positives = 11/18 (61%)
Frame = +3
Query: 1155 DSGHHLYLKSWDRICRSK 1208
D ++ +SW+R+C K
Sbjct: 797 DHSRKIHWQSWERLCLPK 814
Score = 20.8 bits (42), Expect(3) = 2e-13
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = +2
Query: 1202 IKKEAGGLGFR 1234
+ K++GGLGFR
Sbjct: 812 LPKDSGGLGFR 822
>emb|CAB10337.1| reverse transcriptase like protein [Arabidopsis thaliana]
gi|7268307|emb|CAB78601.1| reverse transcriptase like
protein [Arabidopsis thaliana]
Length = 929
Score = 82.8 bits (203), Expect(2) = 2e-13
Identities = 52/172 (30%), Positives = 84/172 (48%)
Frame = +1
Query: 640 ITRAESQQDIHGVKISRGGPLILHLMFADDLAIFCKATESEAIAITKTSDIFCSWFGQSV 819
I A + D + IS+GGP + H+ FADDL +F +A+ ++ +++ K S IF F +V
Sbjct: 470 IETAVGRGDWKSISISQGGPKVSHVCFADDLILFAEASVAQKVSLEK-SKIF---FSNNV 525
Query: 820 NTDKSNTLLQEC*CRGKKSAALYFSYGRMYTR*HLPGYAFLQRKI*DESFHRIHGKSEKK 999
+ D + E + Y G LQ++I ++F + + +
Sbjct: 526 SRDLEGLITAETGIGSTRELGKYL------------GMPVLQKRINKDTFGEVLERVSSR 573
Query: 1000 LSSWKQRRLSQAGRVILINSVVQSISQLLMQCFLLPKSIFHKIGAATRDFFW 1155
LS WK R LS AGR+ L +V+ SI M LLP S+ ++ +R+F W
Sbjct: 574 LSGWKSRSLSLAGRITLTKAVLMSIPIHTMSSILLPASLLEQLDKVSRNFLW 625
Score = 20.4 bits (41), Expect(2) = 2e-13
Identities = 6/12 (50%), Positives = 9/12 (75%)
Frame = +3
Query: 1173 YLKSWDRICRSK 1208
+L SW ++CR K
Sbjct: 635 HLLSWKKVCRPK 646
>gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
Length = 1747
Score = 82.8 bits (203), Expect = 3e-13
Identities = 53/179 (29%), Positives = 84/179 (46%), Gaps = 6/179 (3%)
Frame = +1
Query: 637 LITRAESQQDIHGVKISRGGPLILHLMFADDLAIFCKATESEAIAITKTSDIFCSWFGQS 816
LI +AE +Q IHGV I+RG P + HL +ADD +FC AT ++ +A+ + + GQ
Sbjct: 942 LIRKAEREQQIHGVAIARGAPSVSHLFYADDSLLFCDATVTDCMALKNIFSTYEAASGQK 1001
Query: 817 VNTDKSNTLLQEC*CRGKKSAALYFSYGRMYTR*HLP------GYAFLQRKI*DESFHRI 978
+N DKS K AA+ + + +P G + K + F +
Sbjct: 1002 INKDKSAICFSP-----KSPAAIKEACSAILDMPVVPCHERYLGLPTVSGKDKKKLFQSL 1056
Query: 979 HGKSEKKLSSWKQRRLSQAGRVILINSVVQSISQLLMQCFLLPKSIFHKIGAATRDFFW 1155
+ ++ W+ + LS+AG+ +LI +V Q+I M F LP I F+W
Sbjct: 1057 PDRVWNRVHGWEGKLLSKAGKEVLIKTVAQAIPNYTMSVFQLPAGTSDAINKCVARFWW 1115