BLASTX nr result

ID: Catharanthus22_contig00016120 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00016120
         (409 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOY07117.1| Myb-like HTH transcriptional regulator family pro...    64   2e-08
emb|CBI18131.3| unnamed protein product [Vitis vinifera]               64   2e-08
ref|XP_002268055.1| PREDICTED: uncharacterized protein LOC100265...    64   2e-08
ref|XP_002323602.2| hypothetical protein POPTR_0016s12940g [Popu...    62   6e-08
ref|XP_004302585.1| PREDICTED: uncharacterized protein LOC101295...    56   6e-06
ref|XP_002534265.1| conserved hypothetical protein [Ricinus comm...    56   6e-06

>gb|EOY07117.1| Myb-like HTH transcriptional regulator family protein, putative
           isoform 1 [Theobroma cacao] gi|508715221|gb|EOY07118.1|
           Myb-like HTH transcriptional regulator family protein,
           putative isoform 1 [Theobroma cacao]
          Length = 368

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 52/163 (31%), Positives = 75/163 (46%), Gaps = 27/163 (16%)
 Frame = -2

Query: 408 RNIYNLSQLPMLRGFNQNH---SSPPFRYNRDACWNGLQNLMHNTSMGQSTINKMR--IL 244
           RNIYNLSQLPML+G+N +H   SS  FRY  DA WNG + L  N    +S I++ R  + 
Sbjct: 138 RNIYNLSQLPMLQGYNNHHHGDSSSSFRYG-DASWNGQECLQRNPYSSRSFIDEPRPGLH 196

Query: 243 GSNYSRIMDSSQGSSWKKDELK----SFLDKEAWKGN-----YNHMDQLKTLKHQEKKSR 91
           G+   RI  S   S+W    L+    SF    +WK +     +     L++ + Q +   
Sbjct: 197 GTMTERIFGSKSTSNWSNYSLRMGSSSFNALPSWKSHELKNEFPSSHNLESFRTQPRSGA 256

Query: 90  I-------------DHIQDLMITSSSNTNSSRLEKEGVRKRKA 1
           I             +HI        S+ N +  ++    KRKA
Sbjct: 257 IELNPTSQTQAKVEEHISFGRSIGPSDANKTNAQECKAMKRKA 299


>emb|CBI18131.3| unnamed protein product [Vitis vinifera]
          Length = 403

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 53/163 (32%), Positives = 81/163 (49%), Gaps = 28/163 (17%)
 Frame = -2

Query: 405 NIYNLSQLPMLRGFNQNHSSPPFRYNRDACWNGLQNLMHNTSMGQSTINKM--------- 253
           NIYNLSQLPML+G NQ  +S  FRY  DA W+  +N MH+  +G+S+++K          
Sbjct: 174 NIYNLSQLPMLQGLNQRPTS-SFRYG-DASWSAHENWMHSPFIGRSSVDKTTRPGFYGSV 231

Query: 252 --RILGSNYSRIMD------------SSQGSSWKKDELK-SFLDKEAWKG----NYNHMD 130
             RI G N +                S+ G+  +KD  + SF D E+W+G    +   ++
Sbjct: 232 TERIFGGNNNNSTSCNFHMGTSLNEYSTWGTHVRKDSFQTSFHDHESWRGQAGSSLKELN 291

Query: 129 QLKTLKHQEKKSRIDHIQDLMITSSSNTNSSRLEKEGVRKRKA 1
           QL  ++   ++ R        I S  NT ++ L++    KRKA
Sbjct: 292 QLTQMQAHVRERREHMSLKSRIPSDMNT-ATNLQEWRTVKRKA 333


>ref|XP_002268055.1| PREDICTED: uncharacterized protein LOC100265991 [Vitis vinifera]
           gi|147820277|emb|CAN73581.1| hypothetical protein
           VITISV_002087 [Vitis vinifera]
          Length = 370

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 53/163 (32%), Positives = 81/163 (49%), Gaps = 28/163 (17%)
 Frame = -2

Query: 405 NIYNLSQLPMLRGFNQNHSSPPFRYNRDACWNGLQNLMHNTSMGQSTINKM--------- 253
           NIYNLSQLPML+G NQ  +S  FRY  DA W+  +N MH+  +G+S+++K          
Sbjct: 141 NIYNLSQLPMLQGLNQRPTS-SFRYG-DASWSAHENWMHSPFIGRSSVDKTTRPGFYGSV 198

Query: 252 --RILGSNYSRIMD------------SSQGSSWKKDELK-SFLDKEAWKG----NYNHMD 130
             RI G N +                S+ G+  +KD  + SF D E+W+G    +   ++
Sbjct: 199 TERIFGGNNNNSTSCNFHMGTSLNEYSTWGTHVRKDSFQTSFHDHESWRGQAGSSLKELN 258

Query: 129 QLKTLKHQEKKSRIDHIQDLMITSSSNTNSSRLEKEGVRKRKA 1
           QL  ++   ++ R        I S  NT ++ L++    KRKA
Sbjct: 259 QLTQMQAHVRERREHMSLKSRIPSDMNT-ATNLQEWRTVKRKA 300


>ref|XP_002323602.2| hypothetical protein POPTR_0016s12940g [Populus trichocarpa]
           gi|550321390|gb|EEF05363.2| hypothetical protein
           POPTR_0016s12940g [Populus trichocarpa]
          Length = 378

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 39/103 (37%), Positives = 55/103 (53%), Gaps = 9/103 (8%)
 Frame = -2

Query: 408 RNIYNLSQLPMLRGFNQ-NHSSPPFRYNRDACWNGLQNLMHNTSMGQSTINKMR--ILGS 238
           RNIYNLSQLPML+G+NQ    +  FRY  DA WN  ++ ++N  +G+  I++ R    G+
Sbjct: 138 RNIYNLSQLPMLQGYNQYQRQNSSFRYG-DASWNAREHFIYNPHVGRCVIDRTRPGSYGT 196

Query: 237 NYSRIMDSSQGSSWKKDELK------SFLDKEAWKGNYNHMDQ 127
              RI  SS  S+W  +  K      S + +  WK      DQ
Sbjct: 197 VAERIYGSSNNSNWSANSGKFQMGASSLIAQSKWKNEELKGDQ 239


>ref|XP_004302585.1| PREDICTED: uncharacterized protein LOC101295055 [Fragaria vesca
           subsp. vesca]
          Length = 352

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 55/161 (34%), Positives = 77/161 (47%), Gaps = 25/161 (15%)
 Frame = -2

Query: 408 RNIYNLSQLPMLRGFNQNHSSPPFRY----NRDACWNGLQNLMHNTSMG---QSTINKMR 250
           +NIYNLSQLPML+G+N++H S  FRY    +     +  +NL H  S     Q TI + +
Sbjct: 146 KNIYNLSQLPMLQGYNRSHMSTSFRYGYGDSNSWSTSAYENLRHPRSTSGIFQGTIAE-K 204

Query: 249 ILGSN--------YSRIMDSS-QGSSW----KKDELKSFLD-----KEAWKGNYNHMDQL 124
           + GS+        YS    SS QG SW     KDE     +      +A +   + +D L
Sbjct: 205 LFGSSTSNWNSTAYSNFRTSSEQGPSWITHTLKDECSQLYNIRRQSLQAHQARLSIIDHL 264

Query: 123 KTLKHQEKKSRIDHIQDLMITSSSNTNSSRLEKEGVRKRKA 1
               H + K++ DH   L   SS+ TN   L+     KRKA
Sbjct: 265 NPTMHVQPKAK-DHFTSL---SSTATNLQDLK---TLKRKA 298


>ref|XP_002534265.1| conserved hypothetical protein [Ricinus communis]
           gi|223525618|gb|EEF28118.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 182

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 26/46 (56%), Positives = 36/46 (78%)
 Frame = -2

Query: 408 RNIYNLSQLPMLRGFNQNHSSPPFRYNRDACWNGLQNLMHNTSMGQ 271
           RNIYNLSQLPML+G++Q H+S  +RY  DA WN  +N ++N+ MG+
Sbjct: 139 RNIYNLSQLPMLQGYHQRHAS-SYRYG-DASWNARENFVYNSHMGR 182


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