BLASTX nr result

ID: Catharanthus22_contig00016055 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00016055
         (401 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_001231729.2| PREDICTED: microtubule-associated protein 1B...    57   3e-06
ref|XP_004937428.1| PREDICTED: microtubule-associated protein 1B...    57   3e-06
ref|XP_004937427.1| PREDICTED: microtubule-associated protein 1B...    57   3e-06
emb|CAA47988.1| claustrin [Gallus gallus]                              55   7e-06

>ref|XP_001231729.2| PREDICTED: microtubule-associated protein 1B isoform X1 [Gallus
            gallus]
          Length = 2545

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 44/121 (36%), Positives = 62/121 (51%)
 Frame = +3

Query: 15   KDSTEKEIVKAFDVPESTPPKEVEKAVTETSEEKKTEDAKPQVIVAENVEKPLEKTEVIN 194
            K ++EK+ VK    P+ T  K V+K V    EEKK E  KP+  V++  EKPL K E   
Sbjct: 692  KQASEKQDVK----PKVTKEKSVKKEVKAKPEEKKDEKEKPKKEVSKKEEKPLIKKE--- 744

Query: 195  VITPEKTKLDEIKPIIAKPEEKQAQVNTGFVEAEEKFEAPKETDVAQVKIAEGKILTPEE 374
                EK K ++IK  + K  +K+ +      + E K EAP +    +VK  E K +  EE
Sbjct: 745  ----EKPKKEDIKKEVKKEVKKEEKKE---AKKEVKKEAPPKEAKKEVKKEEKKEIKKEE 797

Query: 375  K 377
            K
Sbjct: 798  K 798


>ref|XP_004937428.1| PREDICTED: microtubule-associated protein 1B isoform X3 [Gallus
            gallus]
          Length = 2562

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 44/121 (36%), Positives = 62/121 (51%)
 Frame = +3

Query: 15   KDSTEKEIVKAFDVPESTPPKEVEKAVTETSEEKKTEDAKPQVIVAENVEKPLEKTEVIN 194
            K ++EK+ VK    P+ T  K V+K V    EEKK E  KP+  V++  EKPL K E   
Sbjct: 692  KQASEKQDVK----PKVTKEKSVKKEVKAKPEEKKDEKEKPKKEVSKKEEKPLIKKE--- 744

Query: 195  VITPEKTKLDEIKPIIAKPEEKQAQVNTGFVEAEEKFEAPKETDVAQVKIAEGKILTPEE 374
                EK K ++IK  + K  +K+ +      + E K EAP +    +VK  E K +  EE
Sbjct: 745  ----EKPKKEDIKKEVKKEVKKEEKKE---AKKEVKKEAPPKEAKKEVKKEEKKEIKKEE 797

Query: 375  K 377
            K
Sbjct: 798  K 798


>ref|XP_004937427.1| PREDICTED: microtubule-associated protein 1B isoform X2 [Gallus
            gallus]
          Length = 2624

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 44/121 (36%), Positives = 62/121 (51%)
 Frame = +3

Query: 15   KDSTEKEIVKAFDVPESTPPKEVEKAVTETSEEKKTEDAKPQVIVAENVEKPLEKTEVIN 194
            K ++EK+ VK    P+ T  K V+K V    EEKK E  KP+  V++  EKPL K E   
Sbjct: 692  KQASEKQDVK----PKVTKEKSVKKEVKAKPEEKKDEKEKPKKEVSKKEEKPLIKKE--- 744

Query: 195  VITPEKTKLDEIKPIIAKPEEKQAQVNTGFVEAEEKFEAPKETDVAQVKIAEGKILTPEE 374
                EK K ++IK  + K  +K+ +      + E K EAP +    +VK  E K +  EE
Sbjct: 745  ----EKPKKEDIKKEVKKEVKKEEKKE---AKKEVKKEAPPKEAKKEVKKEEKKEIKKEE 797

Query: 375  K 377
            K
Sbjct: 798  K 798


>emb|CAA47988.1| claustrin [Gallus gallus]
          Length = 1038

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 43/121 (35%), Positives = 62/121 (51%)
 Frame = +3

Query: 15  KDSTEKEIVKAFDVPESTPPKEVEKAVTETSEEKKTEDAKPQVIVAENVEKPLEKTEVIN 194
           K ++EK+ VK    P+ T  K V+K V    EEKK E  KP+  V++  EKPL K E   
Sbjct: 622 KQASEKQDVK----PKVTKEKSVKKEVKAKPEEKKDEKEKPKKEVSKKEEKPLIKKE--- 674

Query: 195 VITPEKTKLDEIKPIIAKPEEKQAQVNTGFVEAEEKFEAPKETDVAQVKIAEGKILTPEE 374
               EK K ++IK  + K  +K+ +      + E K EAP +    +VK  E + +  EE
Sbjct: 675 ----EKPKKEDIKKEVKKEVKKEEKKE---AKKEVKKEAPPKEAKKEVKKEEKREIKKEE 727

Query: 375 K 377
           K
Sbjct: 728 K 728


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