BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00015959
         (2314 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269194.1| PREDICTED: pentatricopeptide repeat-containi...   979   0.0  
emb|CBI25022.3| unnamed protein product [Vitis vinifera]              975   0.0  
ref|XP_004308615.1| PREDICTED: pentatricopeptide repeat-containi...   966   0.0  
ref|XP_004250470.1| PREDICTED: pentatricopeptide repeat-containi...   964   0.0  
ref|XP_006367245.1| PREDICTED: pentatricopeptide repeat-containi...   962   0.0  
gb|EOY19266.1| Pentatricopeptide repeat-containing protein isofo...   962   0.0  
ref|XP_002316488.2| hypothetical protein POPTR_0010s24770g [Popu...   951   0.0  
ref|XP_006367146.1| PREDICTED: pentatricopeptide repeat-containi...   948   0.0  
ref|XP_006367145.1| PREDICTED: pentatricopeptide repeat-containi...   948   0.0  
ref|XP_006485466.1| PREDICTED: pentatricopeptide repeat-containi...   948   0.0  
ref|XP_004236808.1| PREDICTED: pentatricopeptide repeat-containi...   945   0.0  
ref|XP_004135367.1| PREDICTED: pentatricopeptide repeat-containi...   941   0.0  
ref|XP_002515794.1| pentatricopeptide repeat-containing protein,...   939   0.0  
ref|XP_006367148.1| PREDICTED: pentatricopeptide repeat-containi...   935   0.0  
ref|XP_006367149.1| PREDICTED: pentatricopeptide repeat-containi...   928   0.0  
ref|XP_004514863.1| PREDICTED: pentatricopeptide repeat-containi...   927   0.0  
ref|XP_003556878.1| PREDICTED: pentatricopeptide repeat-containi...   924   0.0  
gb|EOY19268.1| Pentatricopeptide repeat-containing protein isofo...   923   0.0  
gb|EXB55868.1| Pentatricopeptide repeat-containing protein [Moru...   922   0.0  
ref|XP_006605717.1| PREDICTED: pentatricopeptide repeat-containi...   919   0.0  

>ref|XP_002269194.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
            chloroplastic [Vitis vinifera]
          Length = 929

 Score =  979 bits (2530), Expect = 0.0
 Identities = 465/601 (77%), Positives = 535/601 (89%)
 Frame = +1

Query: 1    SLIHAYAVGRDMEEALSCMRKMKDEGVELSLVTYSIIVGGFARVGDVEAAEFWFKEARER 180
            SLIHAYAVGRDMEEALSC+RKMK+EG+E+SLVTYSI+VGGFA++ D EAA+ WFKEA+ER
Sbjct: 329  SLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSILVGGFAKIADAEAADHWFKEAKER 388

Query: 181  HETLXXXXXXXXXXXXCQNCRMDRAEALVREMEEEGIDAPIDIYHTMMDGYTMKGDEERC 360
            H TL            CQ C M +AEALVREMEEEGIDAPIDIYHTMMDGYT+ G+EE+C
Sbjct: 389  HTTLNAIIYGNIIYAHCQACNMTQAEALVREMEEEGIDAPIDIYHTMMDGYTIIGNEEKC 448

Query: 361  LVVFERLKECSLTPSVVSYGCLINLYVKGGKVSKALEVSKMMKLAGIKHNMKTYSMLING 540
            L+VF+RLKEC  TPSV+SYGCLINLY+K GKVSKALEVSKMM++AGIKHNMKTYSMLING
Sbjct: 449  LIVFDRLKECGFTPSVISYGCLINLYIKIGKVSKALEVSKMMEVAGIKHNMKTYSMLING 508

Query: 541  FIKLKDWSNAFAIFEDVIKDGLKPDVILYNNIIRAFCGMGNMDRAIRTVEEMKRARYKPT 720
            F++LKDW+NAFA+FEDV+KDGLKPDV+LYNNIIRAFCGMGNMDRAIRTV+EM++ R++PT
Sbjct: 509  FVRLKDWANAFAVFEDVVKDGLKPDVVLYNNIIRAFCGMGNMDRAIRTVKEMQKERHRPT 568

Query: 721  TRTFMPIIHGFARAGETRRALDVFDMMRMSGCVPTVHTFNALILGLVEKLQIEKAGEILD 900
            TRTFMPIIHGFAR+G+ RRAL++FDMMR SGC+PTVHTFNALILGLVEK Q+EKA EILD
Sbjct: 569  TRTFMPIIHGFARSGDMRRALEIFDMMRWSGCIPTVHTFNALILGLVEKCQMEKAVEILD 628

Query: 901  EMLLADVRPNKHTYTTIMHGYASVGDTGKAFEYFTKLKNEGLELDVYTYEALLKACCKSG 1080
            EM LA + PN+HTYTTIMHGYAS+GDTGKAFEYFTKLK EGLELDVYTYEALLKACCKSG
Sbjct: 629  EMSLAGISPNEHTYTTIMHGYASLGDTGKAFEYFTKLKTEGLELDVYTYEALLKACCKSG 688

Query: 1081 RMQSALAVTKEMNKQGIPRNTFVYNILIDGWARRGDIWEAADLMQQMRQEGVQPDIRTYT 1260
            RMQSALAVT+EM+ Q IPRNTFVYNILIDGWARRGD+WEAA+LMQQM+QEGVQPDI TYT
Sbjct: 689  RMQSALAVTREMSSQKIPRNTFVYNILIDGWARRGDVWEAAELMQQMKQEGVQPDIHTYT 748

Query: 1261 SFINACCKAGDMPRATKTIEEMEAFGVKPNVKTYTTLIHGWARASLPEKALKCFEDMKKA 1440
            SFINACCKAGDM RATKTI+EME  GVKPN+KTYTTLIHGWARASLPEKALKCF++MK A
Sbjct: 749  SFINACCKAGDMQRATKTIQEMEVVGVKPNIKTYTTLIHGWARASLPEKALKCFQEMKSA 808

Query: 1441 GLQPDKAVYHCLMTSLLSRATVAEDYVYTGILHLCGEMVEAGMTVDMGTAVHWSRCLRKI 1620
            GL+PDKAVYHCLMTSLLSRA+VAE+Y+Y+G++ +C EM+E  +TVDMGTAVHWS+CLRKI
Sbjct: 809  GLKPDKAVYHCLMTSLLSRASVAEEYIYSGVVGICREMIECELTVDMGTAVHWSKCLRKI 868

Query: 1621 ERTGGGITEALQKTFPPDWNSHKTLNAISNTDVHFDGSDANDYDDNLLHEDSNSDNETDF 1800
            ERTGG +TEALQKTFPPDWNS+         ++H +  D  D DD     ++++D++ D 
Sbjct: 869  ERTGGELTEALQKTFPPDWNSY---------NIHVNSDDELDVDDAYSGGETDTDDDDDN 919

Query: 1801 D 1803
            D
Sbjct: 920  D 920



 Score =  128 bits (322), Expect = 1e-26
 Identities = 75/270 (27%), Positives = 136/270 (50%)
 Frame = +1

Query: 661  NMDRAIRTVEEMKRARYKPTTRTFMPIIHGFARAGETRRALDVFDMMRMSGCVPTVHTFN 840
            N    ++  E +K    KP+ + F  ++  +AR G+   A   F+ MR  G  PT H + 
Sbjct: 273  NWQAVVQAFERIK----KPSRKEFGLMVTYYARRGDMHHARGTFESMRARGIEPTSHVYT 328

Query: 841  ALILGLVEKLQIEKAGEILDEMLLADVRPNKHTYTTIMHGYASVGDTGKAFEYFTKLKNE 1020
            +LI        +E+A   + +M    +  +  TY+ ++ G+A + D   A  +F + K  
Sbjct: 329  SLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSILVGGFAKIADAEAADHWFKEAKER 388

Query: 1021 GLELDVYTYEALLKACCKSGRMQSALAVTKEMNKQGIPRNTFVYNILIDGWARRGDIWEA 1200
               L+   Y  ++ A C++  M  A A+ +EM ++GI     +Y+ ++DG+   G+  + 
Sbjct: 389  HTTLNAIIYGNIIYAHCQACNMTQAEALVREMEEEGIDAPIDIYHTMMDGYTIIGNEEKC 448

Query: 1201 ADLMQQMRQEGVQPDIRTYTSFINACCKAGDMPRATKTIEEMEAFGVKPNVKTYTTLIHG 1380
              +  ++++ G  P + +Y   IN   K G + +A +  + ME  G+K N+KTY+ LI+G
Sbjct: 449  LIVFDRLKECGFTPSVISYGCLINLYIKIGKVSKALEVSKMMEVAGIKHNMKTYSMLING 508

Query: 1381 WARASLPEKALKCFEDMKKAGLQPDKAVYH 1470
            + R      A   FED+ K GL+PD  +Y+
Sbjct: 509  FVRLKDWANAFAVFEDVVKDGLKPDVVLYN 538



 Score =  127 bits (318), Expect = 3e-26
 Identities = 85/385 (22%), Positives = 174/385 (45%)
 Frame = +1

Query: 370  FERLKECSLTPSVVSYGCLINLYVKGGKVSKALEVSKMMKLAGIKHNMKTYSMLINGFIK 549
            FER+K+    PS   +G ++  Y + G +  A    + M+  GI+     Y+ LI+ +  
Sbjct: 281  FERIKK----PSRKEFGLMVTYYARRGDMHHARGTFESMRARGIEPTSHVYTSLIHAYAV 336

Query: 550  LKDWSNAFAIFEDVIKDGLKPDVILYNNIIRAFCGMGNMDRAIRTVEEMKRARYKPTTRT 729
             +D   A +    + ++G++  ++ Y+ ++  F  + + + A    +E K          
Sbjct: 337  GRDMEEALSCVRKMKEEGIEMSLVTYSILVGGFAKIADAEAADHWFKEAKERHTTLNAII 396

Query: 730  FMPIIHGFARAGETRRALDVFDMMRMSGCVPTVHTFNALILGLVEKLQIEKAGEILDEML 909
            +  II+   +A    +A  +   M   G    +  ++ ++ G       EK   + D + 
Sbjct: 397  YGNIIYAHCQACNMTQAEALVREMEEEGIDAPIDIYHTMMDGYTIIGNEEKCLIVFDRLK 456

Query: 910  LADVRPNKHTYTTIMHGYASVGDTGKAFEYFTKLKNEGLELDVYTYEALLKACCKSGRMQ 1089
                 P+  +Y  +++ Y  +G   KA E    ++  G++ ++ TY  L+    +     
Sbjct: 457  ECGFTPSVISYGCLINLYIKIGKVSKALEVSKMMEVAGIKHNMKTYSMLINGFVRLKDWA 516

Query: 1090 SALAVTKEMNKQGIPRNTFVYNILIDGWARRGDIWEAADLMQQMRQEGVQPDIRTYTSFI 1269
            +A AV +++ K G+  +  +YN +I  +   G++  A   +++M++E  +P  RT+   I
Sbjct: 517  NAFAVFEDVVKDGLKPDVVLYNNIIRAFCGMGNMDRAIRTVKEMQKERHRPTTRTFMPII 576

Query: 1270 NACCKAGDMPRATKTIEEMEAFGVKPNVKTYTTLIHGWARASLPEKALKCFEDMKKAGLQ 1449
            +   ++GDM RA +  + M   G  P V T+  LI G       EKA++  ++M  AG+ 
Sbjct: 577  HGFARSGDMRRALEIFDMMRWSGCIPTVHTFNALILGLVEKCQMEKAVEILDEMSLAGIS 636

Query: 1450 PDKAVYHCLMTSLLSRATVAEDYVY 1524
            P++  Y  +M    S     + + Y
Sbjct: 637  PNEHTYTTIMHGYASLGDTGKAFEY 661



 Score = 86.7 bits (213), Expect = 4e-14
 Identities = 51/209 (24%), Positives = 100/209 (47%)
 Frame = +1

Query: 922  RPNKHTYTTIMHGYASVGDTGKAFEYFTKLKNEGLELDVYTYEALLKACCKSGRMQSALA 1101
            +P++  +  ++  YA  GD   A   F  ++  G+E   + Y +L+ A      M+ AL+
Sbjct: 286  KPSRKEFGLMVTYYARRGDMHHARGTFESMRARGIEPTSHVYTSLIHAYAVGRDMEEALS 345

Query: 1102 VTKEMNKQGIPRNTFVYNILIDGWARRGDIWEAADLMQQMRQEGVQPDIRTYTSFINACC 1281
              ++M ++GI  +   Y+IL+ G+A+  D   A    ++ ++     +   Y + I A C
Sbjct: 346  CVRKMKEEGIEMSLVTYSILVGGFAKIADAEAADHWFKEAKERHTTLNAIIYGNIIYAHC 405

Query: 1282 KAGDMPRATKTIEEMEAFGVKPNVKTYTTLIHGWARASLPEKALKCFEDMKKAGLQPDKA 1461
            +A +M +A   + EME  G+   +  Y T++ G+      EK L  F+ +K+ G  P   
Sbjct: 406  QACNMTQAEALVREMEEEGIDAPIDIYHTMMDGYTIIGNEEKCLIVFDRLKECGFTPSVI 465

Query: 1462 VYHCLMTSLLSRATVAEDYVYTGILHLCG 1548
             Y CL+   +    V++    + ++ + G
Sbjct: 466  SYGCLINLYIKIGKVSKALEVSKMMEVAG 494


>emb|CBI25022.3| unnamed protein product [Vitis vinifera]
          Length = 927

 Score =  975 bits (2521), Expect = 0.0
 Identities = 464/601 (77%), Positives = 539/601 (89%)
 Frame = +1

Query: 1    SLIHAYAVGRDMEEALSCMRKMKDEGVELSLVTYSIIVGGFARVGDVEAAEFWFKEARER 180
            SLIHAYAVGRDMEEALSC+RKMK+EG+E+SLVTYSI+VGGFA++ D EAA+ WFKEA+ER
Sbjct: 308  SLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSILVGGFAKIADAEAADHWFKEAKER 367

Query: 181  HETLXXXXXXXXXXXXCQNCRMDRAEALVREMEEEGIDAPIDIYHTMMDGYTMKGDEERC 360
            H TL            CQ C M +AEALVREMEEEGIDAPIDIYHTMMDGYT+ G+EE+C
Sbjct: 368  HTTLNAIIYGNIIYAHCQACNMTQAEALVREMEEEGIDAPIDIYHTMMDGYTIIGNEEKC 427

Query: 361  LVVFERLKECSLTPSVVSYGCLINLYVKGGKVSKALEVSKMMKLAGIKHNMKTYSMLING 540
            L+VF+RLKEC  TPSV+SYGCLINLY+K GKVSKALEVSKMM++AGIKHNMKTYSMLING
Sbjct: 428  LIVFDRLKECGFTPSVISYGCLINLYIKIGKVSKALEVSKMMEVAGIKHNMKTYSMLING 487

Query: 541  FIKLKDWSNAFAIFEDVIKDGLKPDVILYNNIIRAFCGMGNMDRAIRTVEEMKRARYKPT 720
            F++LKDW+NAFA+FEDV+KDGLKPDV+LYNNIIRAFCGMGNMDRAIRTV+EM++ R++PT
Sbjct: 488  FVRLKDWANAFAVFEDVVKDGLKPDVVLYNNIIRAFCGMGNMDRAIRTVKEMQKERHRPT 547

Query: 721  TRTFMPIIHGFARAGETRRALDVFDMMRMSGCVPTVHTFNALILGLVEKLQIEKAGEILD 900
            TRTFMPIIHGFAR+G+ RRAL++FDMMR SGC+PTVHTFNALILGLVEK Q+EKA EILD
Sbjct: 548  TRTFMPIIHGFARSGDMRRALEIFDMMRWSGCIPTVHTFNALILGLVEKCQMEKAVEILD 607

Query: 901  EMLLADVRPNKHTYTTIMHGYASVGDTGKAFEYFTKLKNEGLELDVYTYEALLKACCKSG 1080
            EM LA + PN+HTYTTIMHGYAS+GDTGKAFEYFTKLK EGLELDVYTYEALLKACCKSG
Sbjct: 608  EMSLAGISPNEHTYTTIMHGYASLGDTGKAFEYFTKLKTEGLELDVYTYEALLKACCKSG 667

Query: 1081 RMQSALAVTKEMNKQGIPRNTFVYNILIDGWARRGDIWEAADLMQQMRQEGVQPDIRTYT 1260
            RMQSALAVT+EM+ Q IPRNTFVYNILIDGWARRGD+WEAA+LMQQM+QEGVQPDI TYT
Sbjct: 668  RMQSALAVTREMSSQKIPRNTFVYNILIDGWARRGDVWEAAELMQQMKQEGVQPDIHTYT 727

Query: 1261 SFINACCKAGDMPRATKTIEEMEAFGVKPNVKTYTTLIHGWARASLPEKALKCFEDMKKA 1440
            SFINACCKAGDM RATKTI+EME  GVKPN+KTYTTLIHGWARASLPEKALKCF++MK A
Sbjct: 728  SFINACCKAGDMQRATKTIQEMEVVGVKPNIKTYTTLIHGWARASLPEKALKCFQEMKSA 787

Query: 1441 GLQPDKAVYHCLMTSLLSRATVAEDYVYTGILHLCGEMVEAGMTVDMGTAVHWSRCLRKI 1620
            GL+PDKAVYHCLMTSLLSRA+VAE+Y+Y+G++ +C EM+E  +TVDMGTAVHWS+CLRKI
Sbjct: 788  GLKPDKAVYHCLMTSLLSRASVAEEYIYSGVVGICREMIECELTVDMGTAVHWSKCLRKI 847

Query: 1621 ERTGGGITEALQKTFPPDWNSHKTLNAISNTDVHFDGSDANDYDDNLLHEDSNSDNETDF 1800
            ERTGG +TEALQKTFPPDWNS+  ++  S+ ++  D + +  +    L++ S S+N+ +F
Sbjct: 848  ERTGGELTEALQKTFPPDWNSY-NIHVNSDDELDVDDAYSGGFLSPNLYKVSMSNNKENF 906

Query: 1801 D 1803
            +
Sbjct: 907  N 907



 Score =  128 bits (322), Expect = 1e-26
 Identities = 75/270 (27%), Positives = 136/270 (50%)
 Frame = +1

Query: 661  NMDRAIRTVEEMKRARYKPTTRTFMPIIHGFARAGETRRALDVFDMMRMSGCVPTVHTFN 840
            N    ++  E +K    KP+ + F  ++  +AR G+   A   F+ MR  G  PT H + 
Sbjct: 252  NWQAVVQAFERIK----KPSRKEFGLMVTYYARRGDMHHARGTFESMRARGIEPTSHVYT 307

Query: 841  ALILGLVEKLQIEKAGEILDEMLLADVRPNKHTYTTIMHGYASVGDTGKAFEYFTKLKNE 1020
            +LI        +E+A   + +M    +  +  TY+ ++ G+A + D   A  +F + K  
Sbjct: 308  SLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSILVGGFAKIADAEAADHWFKEAKER 367

Query: 1021 GLELDVYTYEALLKACCKSGRMQSALAVTKEMNKQGIPRNTFVYNILIDGWARRGDIWEA 1200
               L+   Y  ++ A C++  M  A A+ +EM ++GI     +Y+ ++DG+   G+  + 
Sbjct: 368  HTTLNAIIYGNIIYAHCQACNMTQAEALVREMEEEGIDAPIDIYHTMMDGYTIIGNEEKC 427

Query: 1201 ADLMQQMRQEGVQPDIRTYTSFINACCKAGDMPRATKTIEEMEAFGVKPNVKTYTTLIHG 1380
              +  ++++ G  P + +Y   IN   K G + +A +  + ME  G+K N+KTY+ LI+G
Sbjct: 428  LIVFDRLKECGFTPSVISYGCLINLYIKIGKVSKALEVSKMMEVAGIKHNMKTYSMLING 487

Query: 1381 WARASLPEKALKCFEDMKKAGLQPDKAVYH 1470
            + R      A   FED+ K GL+PD  +Y+
Sbjct: 488  FVRLKDWANAFAVFEDVVKDGLKPDVVLYN 517



 Score =  127 bits (318), Expect = 3e-26
 Identities = 85/385 (22%), Positives = 174/385 (45%)
 Frame = +1

Query: 370  FERLKECSLTPSVVSYGCLINLYVKGGKVSKALEVSKMMKLAGIKHNMKTYSMLINGFIK 549
            FER+K+    PS   +G ++  Y + G +  A    + M+  GI+     Y+ LI+ +  
Sbjct: 260  FERIKK----PSRKEFGLMVTYYARRGDMHHARGTFESMRARGIEPTSHVYTSLIHAYAV 315

Query: 550  LKDWSNAFAIFEDVIKDGLKPDVILYNNIIRAFCGMGNMDRAIRTVEEMKRARYKPTTRT 729
             +D   A +    + ++G++  ++ Y+ ++  F  + + + A    +E K          
Sbjct: 316  GRDMEEALSCVRKMKEEGIEMSLVTYSILVGGFAKIADAEAADHWFKEAKERHTTLNAII 375

Query: 730  FMPIIHGFARAGETRRALDVFDMMRMSGCVPTVHTFNALILGLVEKLQIEKAGEILDEML 909
            +  II+   +A    +A  +   M   G    +  ++ ++ G       EK   + D + 
Sbjct: 376  YGNIIYAHCQACNMTQAEALVREMEEEGIDAPIDIYHTMMDGYTIIGNEEKCLIVFDRLK 435

Query: 910  LADVRPNKHTYTTIMHGYASVGDTGKAFEYFTKLKNEGLELDVYTYEALLKACCKSGRMQ 1089
                 P+  +Y  +++ Y  +G   KA E    ++  G++ ++ TY  L+    +     
Sbjct: 436  ECGFTPSVISYGCLINLYIKIGKVSKALEVSKMMEVAGIKHNMKTYSMLINGFVRLKDWA 495

Query: 1090 SALAVTKEMNKQGIPRNTFVYNILIDGWARRGDIWEAADLMQQMRQEGVQPDIRTYTSFI 1269
            +A AV +++ K G+  +  +YN +I  +   G++  A   +++M++E  +P  RT+   I
Sbjct: 496  NAFAVFEDVVKDGLKPDVVLYNNIIRAFCGMGNMDRAIRTVKEMQKERHRPTTRTFMPII 555

Query: 1270 NACCKAGDMPRATKTIEEMEAFGVKPNVKTYTTLIHGWARASLPEKALKCFEDMKKAGLQ 1449
            +   ++GDM RA +  + M   G  P V T+  LI G       EKA++  ++M  AG+ 
Sbjct: 556  HGFARSGDMRRALEIFDMMRWSGCIPTVHTFNALILGLVEKCQMEKAVEILDEMSLAGIS 615

Query: 1450 PDKAVYHCLMTSLLSRATVAEDYVY 1524
            P++  Y  +M    S     + + Y
Sbjct: 616  PNEHTYTTIMHGYASLGDTGKAFEY 640



 Score = 86.7 bits (213), Expect = 4e-14
 Identities = 51/209 (24%), Positives = 100/209 (47%)
 Frame = +1

Query: 922  RPNKHTYTTIMHGYASVGDTGKAFEYFTKLKNEGLELDVYTYEALLKACCKSGRMQSALA 1101
            +P++  +  ++  YA  GD   A   F  ++  G+E   + Y +L+ A      M+ AL+
Sbjct: 265  KPSRKEFGLMVTYYARRGDMHHARGTFESMRARGIEPTSHVYTSLIHAYAVGRDMEEALS 324

Query: 1102 VTKEMNKQGIPRNTFVYNILIDGWARRGDIWEAADLMQQMRQEGVQPDIRTYTSFINACC 1281
              ++M ++GI  +   Y+IL+ G+A+  D   A    ++ ++     +   Y + I A C
Sbjct: 325  CVRKMKEEGIEMSLVTYSILVGGFAKIADAEAADHWFKEAKERHTTLNAIIYGNIIYAHC 384

Query: 1282 KAGDMPRATKTIEEMEAFGVKPNVKTYTTLIHGWARASLPEKALKCFEDMKKAGLQPDKA 1461
            +A +M +A   + EME  G+   +  Y T++ G+      EK L  F+ +K+ G  P   
Sbjct: 385  QACNMTQAEALVREMEEEGIDAPIDIYHTMMDGYTIIGNEEKCLIVFDRLKECGFTPSVI 444

Query: 1462 VYHCLMTSLLSRATVAEDYVYTGILHLCG 1548
             Y CL+   +    V++    + ++ + G
Sbjct: 445  SYGCLINLYIKIGKVSKALEVSKMMEVAG 473


>ref|XP_004308615.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
            chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 924

 Score =  966 bits (2496), Expect = 0.0
 Identities = 462/605 (76%), Positives = 536/605 (88%), Gaps = 11/605 (1%)
 Frame = +1

Query: 1    SLIHAYAVGRDMEEALSCMRKMKDEGVELSLVTYSIIVGGFARVGDVEAAEFWFKEARER 180
            SLIHAYAVGRDMEEALSC+RKMKDEGVE+SLVTYSIIVGGFA+VG+ +AA+ WFKEA+ER
Sbjct: 316  SLIHAYAVGRDMEEALSCVRKMKDEGVEMSLVTYSIIVGGFAKVGNAKAADDWFKEAKER 375

Query: 181  HETLXXXXXXXXXXXXCQNCRMDRAEALVREMEEEGIDAPIDIYHTMMDGYTMKGDEERC 360
            H TL            CQ C MDRAEALVREMEE GIDAPIDIYHTMMDGYTM GDE++C
Sbjct: 376  HTTLNAIIYGNIVYAHCQTCNMDRAEALVREMEEAGIDAPIDIYHTMMDGYTMVGDEDKC 435

Query: 361  LVVFERLKECSLTPSVVSYGCLINLYVKGGKVSKALEVSKMMKLAGIKHNMKTYSMLING 540
            L+VFERLKEC  TPS++SYGCLINLYVK GKVSKALEVSK M+  GIKHNMKTYSMLING
Sbjct: 436  LIVFERLKECGFTPSIISYGCLINLYVKVGKVSKALEVSKRMETTGIKHNMKTYSMLING 495

Query: 541  FIKLKDWSNAFAIFEDVIKDGLKPDVILYNNIIRAFCGMGNMDRAIRTVEEMKRARYKPT 720
            F+KLKDW+NAFA+ ED++KDGLKPDV+LYNNII AFCGMGNM+RA+RTV+EM++ R++PT
Sbjct: 496  FLKLKDWANAFAVIEDLMKDGLKPDVVLYNNIITAFCGMGNMNRAVRTVKEMQKERHRPT 555

Query: 721  TRTFMPIIHGFARAGETRRALDVFDMMRMSGCVPTVHTFNALILGLVEKLQIEKAGEILD 900
            +RTFMPIIHGFARAG+ RRAL++FDMMRMSGC+PTVHTFNAL+LGLVEK Q++KA EILD
Sbjct: 556  SRTFMPIIHGFARAGDMRRALEIFDMMRMSGCIPTVHTFNALVLGLVEKRQMDKAVEILD 615

Query: 901  EMLLADVRPNKHTYTTIMHGYASVGDTGKAFEYFTKLKNEGLELDVYTYEALLKACCKSG 1080
            EM LA + PN+HTYTTIM+GYAS+GDTGKAFEYF+KL+N+GLE+DV+TYEALLKACCK+G
Sbjct: 616  EMTLAGICPNQHTYTTIMNGYASLGDTGKAFEYFSKLRNDGLEIDVFTYEALLKACCKAG 675

Query: 1081 RMQSALAVTKEMNKQGIPRNTFVYNILIDGWARRGDIWEAADLMQQMRQEGVQPDIRTYT 1260
            +MQSALAVTKEM+ Q IPRNTFVYNIL+DGWARRGD+WEAADLMQQM++EGVQPDI +YT
Sbjct: 676  KMQSALAVTKEMSAQKIPRNTFVYNILVDGWARRGDVWEAADLMQQMKREGVQPDIHSYT 735

Query: 1261 SFINACCKAGDMPRATKTIEEMEAFGVKPNVKTYTTLIHGWARASLPEKALKCFEDMKKA 1440
            SFINACCKAGDM RA KTI+EM+ FGVKPN+KTYTTLIHGWARASLPEKAL+CF+DMK A
Sbjct: 736  SFINACCKAGDMQRAAKTIDEMKTFGVKPNIKTYTTLIHGWARASLPEKALRCFKDMKLA 795

Query: 1441 GLQPDKAVYHCLMTSLLSRATVAEDYVYTGILHLCGEMVEAGMTVDMGTAVHWSRCLRKI 1620
            GL+PDKAVYHCLMTSLLSRATVAE Y+Y+G+L +C EM+E+G+TVDMGTAVHWSRCL KI
Sbjct: 796  GLKPDKAVYHCLMTSLLSRATVAEAYIYSGLLSICKEMIESGLTVDMGTAVHWSRCLCKI 855

Query: 1621 ERTGGGITEALQKTFPPDWNSHKTLNAISN------TDVHFDGSDANDYD-----DNLLH 1767
            ER+GG +TEALQKTFPPDWNS  TL+  S+       DV+ DG D +D +     DN++ 
Sbjct: 856  ERSGGELTEALQKTFPPDWNSCHTLSTSSDVDSDYEVDVNSDGDDEDDREFASRIDNVMM 915

Query: 1768 EDSNS 1782
             D +S
Sbjct: 916  TDEDS 920



 Score =  194 bits (492), Expect = 2e-46
 Identities = 111/390 (28%), Positives = 194/390 (49%)
 Frame = +1

Query: 310  YHTMMDGYTMKGDEERCLVVFERLKECSLTPSVVSYGCLINLYVKGGKVSKALEVSKMMK 489
            Y  M+  Y  +GD  R    FE ++   + P+   Y  LI+ Y  G  + +AL   + MK
Sbjct: 279  YGLMVKYYARRGDMHRARETFESMRARGIEPTSHVYTSLIHAYAVGRDMEEALSCVRKMK 338

Query: 490  LAGIKHNMKTYSMLINGFIKLKDWSNAFAIFEDVIKDGLKPDVILYNNIIRAFCGMGNMD 669
              G++ ++ TYS+++ GF K+ +   A   F++  +     + I+Y NI+ A C   NMD
Sbjct: 339  DEGVEMSLVTYSIIVGGFAKVGNAKAADDWFKEAKERHTTLNAIIYGNIVYAHCQTCNMD 398

Query: 670  RAIRTVEEMKRARYKPTTRTFMPIIHGFARAGETRRALDVFDMMRMSGCVPTVHTFNALI 849
            RA   V EM+ A        +  ++ G+   G+  + L VF+ ++  G  P++ ++  LI
Sbjct: 399  RAEALVREMEEAGIDAPIDIYHTMMDGYTMVGDEDKCLIVFERLKECGFTPSIISYGCLI 458

Query: 850  LGLVEKLQIEKAGEILDEMLLADVRPNKHTYTTIMHGYASVGDTGKAFEYFTKLKNEGLE 1029
               V+  ++ KA E+   M    ++ N  TY+ +++G+  + D   AF     L  +GL+
Sbjct: 459  NLYVKVGKVSKALEVSKRMETTGIKHNMKTYSMLINGFLKLKDWANAFAVIEDLMKDGLK 518

Query: 1030 LDVYTYEALLKACCKSGRMQSALAVTKEMNKQGIPRNTFVYNILIDGWARRGDIWEAADL 1209
             DV  Y  ++ A C  G M  A+   KEM K+     +  +  +I G+AR GD+  A ++
Sbjct: 519  PDVVLYNNIITAFCGMGNMNRAVRTVKEMQKERHRPTSRTFMPIIHGFARAGDMRRALEI 578

Query: 1210 MQQMRQEGVQPDIRTYTSFINACCKAGDMPRATKTIEEMEAFGVKPNVKTYTTLIHGWAR 1389
               MR  G  P + T+ + +    +   M +A + ++EM   G+ PN  TYTT+++G+A 
Sbjct: 579  FDMMRMSGCIPTVHTFNALVLGLVEKRQMDKAVEILDEMTLAGICPNQHTYTTIMNGYAS 638

Query: 1390 ASLPEKALKCFEDMKKAGLQPDKAVYHCLM 1479
                 KA + F  ++  GL+ D   Y  L+
Sbjct: 639  LGDTGKAFEYFSKLRNDGLEIDVFTYEALL 668



 Score =  155 bits (393), Expect = 6e-35
 Identities = 89/326 (27%), Positives = 165/326 (50%)
 Frame = +1

Query: 520  YSMLINGFIKLKDWSNAFAIFEDVIKDGLKPDVILYNNIIRAFCGMGNMDRAIRTVEEMK 699
            Y +++  + +  D   A   FE +   G++P   +Y ++I A+    +M+ A+  V +MK
Sbjct: 279  YGLMVKYYARRGDMHRARETFESMRARGIEPTSHVYTSLIHAYAVGRDMEEALSCVRKMK 338

Query: 700  RARYKPTTRTFMPIIHGFARAGETRRALDVFDMMRMSGCVPTVHTFNALILGLVEKLQIE 879
                + +  T+  I+ GFA+ G  + A D F   +          +  ++    +   ++
Sbjct: 339  DEGVEMSLVTYSIIVGGFAKVGNAKAADDWFKEAKERHTTLNAIIYGNIVYAHCQTCNMD 398

Query: 880  KAGEILDEMLLADVRPNKHTYTTIMHGYASVGDTGKAFEYFTKLKNEGLELDVYTYEALL 1059
            +A  ++ EM  A +      Y T+M GY  VGD  K    F +LK  G    + +Y  L+
Sbjct: 399  RAEALVREMEEAGIDAPIDIYHTMMDGYTMVGDEDKCLIVFERLKECGFTPSIISYGCLI 458

Query: 1060 KACCKSGRMQSALAVTKEMNKQGIPRNTFVYNILIDGWARRGDIWEAADLMQQMRQEGVQ 1239
                K G++  AL V+K M   GI  N   Y++LI+G+ +  D   A  +++ + ++G++
Sbjct: 459  NLYVKVGKVSKALEVSKRMETTGIKHNMKTYSMLINGFLKLKDWANAFAVIEDLMKDGLK 518

Query: 1240 PDIRTYTSFINACCKAGDMPRATKTIEEMEAFGVKPNVKTYTTLIHGWARASLPEKALKC 1419
            PD+  Y + I A C  G+M RA +T++EM+    +P  +T+  +IHG+ARA    +AL+ 
Sbjct: 519  PDVVLYNNIITAFCGMGNMNRAVRTVKEMQKERHRPTSRTFMPIIHGFARAGDMRRALEI 578

Query: 1420 FEDMKKAGLQPDKAVYHCLMTSLLSR 1497
            F+ M+ +G  P    ++ L+  L+ +
Sbjct: 579  FDMMRMSGCIPTVHTFNALVLGLVEK 604



 Score =  132 bits (333), Expect = 5e-28
 Identities = 76/258 (29%), Positives = 136/258 (52%)
 Frame = +1

Query: 712  KPTTRTFMPIIHGFARAGETRRALDVFDMMRMSGCVPTVHTFNALILGLVEKLQIEKAGE 891
            KP+   +  ++  +AR G+  RA + F+ MR  G  PT H + +LI        +E+A  
Sbjct: 273  KPSRGEYGLMVKYYARRGDMHRARETFESMRARGIEPTSHVYTSLIHAYAVGRDMEEALS 332

Query: 892  ILDEMLLADVRPNKHTYTTIMHGYASVGDTGKAFEYFTKLKNEGLELDVYTYEALLKACC 1071
             + +M    V  +  TY+ I+ G+A VG+   A ++F + K     L+   Y  ++ A C
Sbjct: 333  CVRKMKDEGVEMSLVTYSIIVGGFAKVGNAKAADDWFKEAKERHTTLNAIIYGNIVYAHC 392

Query: 1072 KSGRMQSALAVTKEMNKQGIPRNTFVYNILIDGWARRGDIWEAADLMQQMRQEGVQPDIR 1251
            ++  M  A A+ +EM + GI     +Y+ ++DG+   GD  +   + +++++ G  P I 
Sbjct: 393  QTCNMDRAEALVREMEEAGIDAPIDIYHTMMDGYTMVGDEDKCLIVFERLKECGFTPSII 452

Query: 1252 TYTSFINACCKAGDMPRATKTIEEMEAFGVKPNVKTYTTLIHGWARASLPEKALKCFEDM 1431
            +Y   IN   K G + +A +  + ME  G+K N+KTY+ LI+G+ +      A    ED+
Sbjct: 453  SYGCLINLYVKVGKVSKALEVSKRMETTGIKHNMKTYSMLINGFLKLKDWANAFAVIEDL 512

Query: 1432 KKAGLQPDKAVYHCLMTS 1485
             K GL+PD  +Y+ ++T+
Sbjct: 513  MKDGLKPDVVLYNNIITA 530


>ref|XP_004250470.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
            chloroplastic-like [Solanum lycopersicum]
          Length = 932

 Score =  964 bits (2491), Expect = 0.0
 Identities = 461/599 (76%), Positives = 535/599 (89%)
 Frame = +1

Query: 1    SLIHAYAVGRDMEEALSCMRKMKDEGVELSLVTYSIIVGGFARVGDVEAAEFWFKEARER 180
            +LIHAYAV RDMEEALSC+R+MKDEG+E+SLVT+SI+V GFA++G++EAAE  FKEA+ER
Sbjct: 332  NLIHAYAVARDMEEALSCVRRMKDEGIEMSLVTHSILVDGFAKLGNIEAAEQCFKEAKER 391

Query: 181  HETLXXXXXXXXXXXXCQNCRMDRAEALVREMEEEGIDAPIDIYHTMMDGYTMKGDEERC 360
            + TL            CQ C MDRAE LVREMEEEGIDAPIDIYH MMDGYT  G+E++C
Sbjct: 392  YLTLNAIIYGSIIYANCQTCNMDRAEELVREMEEEGIDAPIDIYHIMMDGYTSIGNEDKC 451

Query: 361  LVVFERLKECSLTPSVVSYGCLINLYVKGGKVSKALEVSKMMKLAGIKHNMKTYSMLING 540
            L++F+RLKEC  TPSVVSYGCL+NL++K GKVSKA EVS+MMKLAGIKHNMKTYSMLING
Sbjct: 452  LILFDRLKECGFTPSVVSYGCLMNLFIKVGKVSKAFEVSEMMKLAGIKHNMKTYSMLING 511

Query: 541  FIKLKDWSNAFAIFEDVIKDGLKPDVILYNNIIRAFCGMGNMDRAIRTVEEMKRARYKPT 720
            FI LKDW+NAFAIFEDVI+DGLKPDV+LYNNIIRAFCGMGN++RA+R VEEMK+ R++PT
Sbjct: 512  FINLKDWANAFAIFEDVIRDGLKPDVVLYNNIIRAFCGMGNIERAVRIVEEMKKERHRPT 571

Query: 721  TRTFMPIIHGFARAGETRRALDVFDMMRMSGCVPTVHTFNALILGLVEKLQIEKAGEILD 900
            +RTFMPIIH FA+AGE R+ALDVFDMMR SGC+PTV TFNALILGLVEKLQ+EKA ++LD
Sbjct: 572  SRTFMPIIHAFAKAGEIRKALDVFDMMRRSGCIPTVQTFNALILGLVEKLQMEKAVQVLD 631

Query: 901  EMLLADVRPNKHTYTTIMHGYASVGDTGKAFEYFTKLKNEGLELDVYTYEALLKACCKSG 1080
            EMLLA +RPN+ TYTTIM GYAS+GDTGKAFEYF+++K+EGLELD+YTYEALLKACCK+G
Sbjct: 632  EMLLAGIRPNERTYTTIMDGYASLGDTGKAFEYFSRIKDEGLELDIYTYEALLKACCKAG 691

Query: 1081 RMQSALAVTKEMNKQGIPRNTFVYNILIDGWARRGDIWEAADLMQQMRQEGVQPDIRTYT 1260
            RMQSALAVTKEM+ + IPRNT+VYNILIDGWARRGD+WEAADLMQQMRQEGVQPDI TYT
Sbjct: 692  RMQSALAVTKEMSAKNIPRNTYVYNILIDGWARRGDVWEAADLMQQMRQEGVQPDIHTYT 751

Query: 1261 SFINACCKAGDMPRATKTIEEMEAFGVKPNVKTYTTLIHGWARASLPEKALKCFEDMKKA 1440
            SF+NACCKAGDM +AT TI EM+  GVKPNVKTYTTLIHGWARASLPEKALKCFE+MK++
Sbjct: 752  SFVNACCKAGDMQKATNTILEMKRIGVKPNVKTYTTLIHGWARASLPEKALKCFEEMKRS 811

Query: 1441 GLQPDKAVYHCLMTSLLSRATVAEDYVYTGILHLCGEMVEAGMTVDMGTAVHWSRCLRKI 1620
            GL+PDKAVYHCLMTSLLSRATVAE Y+  GI H+C EMVE+G+TVDMGTAVHWSRCLRKI
Sbjct: 812  GLKPDKAVYHCLMTSLLSRATVAEYYIIEGIHHVCEEMVESGLTVDMGTAVHWSRCLRKI 871

Query: 1621 ERTGGGITEALQKTFPPDWNSHKTLNAISNTDVHFDGSDANDYDDNLLHEDSNSDNETD 1797
            ERTGG +TEALQKTFPPDWNSH+  NA SN   + +GSD +DYDD   +E ++SD++T+
Sbjct: 872  ERTGGNLTEALQKTFPPDWNSHRNPNAASNNTGNTEGSDNDDYDDGPFYE-TDSDDDTN 929



 Score =  195 bits (496), Expect = 6e-47
 Identities = 112/387 (28%), Positives = 206/387 (53%)
 Frame = +1

Query: 319  MMDGYTMKGDEERCLVVFERLKECSLTPSVVSYGCLINLYVKGGKVSKALEVSKMMKLAG 498
            M++ Y  +GD  R    FE+++   + P+V  Y  LI+ Y     + +AL   + MK  G
Sbjct: 298  MVNYYGRRGDMHRARETFEKMRARGIEPTVHVYTNLIHAYAVARDMEEALSCVRRMKDEG 357

Query: 499  IKHNMKTYSMLINGFIKLKDWSNAFAIFEDVIKDGLKPDVILYNNIIRAFCGMGNMDRAI 678
            I+ ++ T+S+L++GF KL +   A   F++  +  L  + I+Y +II A C   NMDRA 
Sbjct: 358  IEMSLVTHSILVDGFAKLGNIEAAEQCFKEAKERYLTLNAIIYGSIIYANCQTCNMDRAE 417

Query: 679  RTVEEMKRARYKPTTRTFMPIIHGFARAGETRRALDVFDMMRMSGCVPTVHTFNALILGL 858
              V EM+          +  ++ G+   G   + L +FD ++  G  P+V ++  L+   
Sbjct: 418  ELVREMEEEGIDAPIDIYHIMMDGYTSIGNEDKCLILFDRLKECGFTPSVVSYGCLMNLF 477

Query: 859  VEKLQIEKAGEILDEMLLADVRPNKHTYTTIMHGYASVGDTGKAFEYFTKLKNEGLELDV 1038
            ++  ++ KA E+ + M LA ++ N  TY+ +++G+ ++ D   AF  F  +  +GL+ DV
Sbjct: 478  IKVGKVSKAFEVSEMMKLAGIKHNMKTYSMLINGFINLKDWANAFAIFEDVIRDGLKPDV 537

Query: 1039 YTYEALLKACCKSGRMQSALAVTKEMNKQGIPRNTFVYNILIDGWARRGDIWEAADLMQQ 1218
              Y  +++A C  G ++ A+ + +EM K+     +  +  +I  +A+ G+I +A D+   
Sbjct: 538  VLYNNIIRAFCGMGNIERAVRIVEEMKKERHRPTSRTFMPIIHAFAKAGEIRKALDVFDM 597

Query: 1219 MRQEGVQPDIRTYTSFINACCKAGDMPRATKTIEEMEAFGVKPNVKTYTTLIHGWARASL 1398
            MR+ G  P ++T+ + I    +   M +A + ++EM   G++PN +TYTT++ G+A    
Sbjct: 598  MRRSGCIPTVQTFNALILGLVEKLQMEKAVQVLDEMLLAGIRPNERTYTTIMDGYASLGD 657

Query: 1399 PEKALKCFEDMKKAGLQPDKAVYHCLM 1479
              KA + F  +K  GL+ D   Y  L+
Sbjct: 658  TGKAFEYFSRIKDEGLELDIYTYEALL 684



 Score =  100 bits (250), Expect = 2e-18
 Identities = 55/209 (26%), Positives = 106/209 (50%)
 Frame = +1

Query: 922  RPNKHTYTTIMHGYASVGDTGKAFEYFTKLKNEGLELDVYTYEALLKACCKSGRMQSALA 1101
            +P++  +  +++ Y   GD  +A E F K++  G+E  V+ Y  L+ A   +  M+ AL+
Sbjct: 289  KPSRKEFGLMVNYYGRRGDMHRARETFEKMRARGIEPTVHVYTNLIHAYAVARDMEEALS 348

Query: 1102 VTKEMNKQGIPRNTFVYNILIDGWARRGDIWEAADLMQQMRQEGVQPDIRTYTSFINACC 1281
              + M  +GI  +   ++IL+DG+A+ G+I  A    ++ ++  +  +   Y S I A C
Sbjct: 349  CVRRMKDEGIEMSLVTHSILVDGFAKLGNIEAAEQCFKEAKERYLTLNAIIYGSIIYANC 408

Query: 1282 KAGDMPRATKTIEEMEAFGVKPNVKTYTTLIHGWARASLPEKALKCFEDMKKAGLQPDKA 1461
            +  +M RA + + EME  G+   +  Y  ++ G+      +K L  F+ +K+ G  P   
Sbjct: 409  QTCNMDRAEELVREMEEEGIDAPIDIYHIMMDGYTSIGNEDKCLILFDRLKECGFTPSVV 468

Query: 1462 VYHCLMTSLLSRATVAEDYVYTGILHLCG 1548
             Y CLM   +    V++ +  + ++ L G
Sbjct: 469  SYGCLMNLFIKVGKVSKAFEVSEMMKLAG 497


>ref|XP_006367245.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
            chloroplastic-like [Solanum tuberosum]
          Length = 944

 Score =  962 bits (2488), Expect = 0.0
 Identities = 462/599 (77%), Positives = 530/599 (88%)
 Frame = +1

Query: 1    SLIHAYAVGRDMEEALSCMRKMKDEGVELSLVTYSIIVGGFARVGDVEAAEFWFKEARER 180
            +LIHAYAV RDMEEALSC+R+MKDEG+E+SLVT+SI+V GFA++G++EAAE WFKEA+ER
Sbjct: 343  NLIHAYAVARDMEEALSCVRRMKDEGIEMSLVTHSILVDGFAKLGNIEAAEQWFKEAKER 402

Query: 181  HETLXXXXXXXXXXXXCQNCRMDRAEALVREMEEEGIDAPIDIYHTMMDGYTMKGDEERC 360
            H TL            CQ C MDRAE LVREMEEEGIDAPIDIYH MMDGYT  G+E++C
Sbjct: 403  HPTLNAIIYGSIIYANCQTCNMDRAEELVREMEEEGIDAPIDIYHIMMDGYTSIGNEDKC 462

Query: 361  LVVFERLKECSLTPSVVSYGCLINLYVKGGKVSKALEVSKMMKLAGIKHNMKTYSMLING 540
            L+V++RLKEC  TPSVVSYGCL+NLY+K GKVSKA EVS+MMKLAGIKHNMKTYSMLING
Sbjct: 463  LIVYDRLKECGFTPSVVSYGCLMNLYIKVGKVSKAFEVSEMMKLAGIKHNMKTYSMLING 522

Query: 541  FIKLKDWSNAFAIFEDVIKDGLKPDVILYNNIIRAFCGMGNMDRAIRTVEEMKRARYKPT 720
            FI LKDW+NAFAIFEDVI+DGLKPDV+LYNNIIRAFCGM N+DRA+  VEEMK+ R++PT
Sbjct: 523  FINLKDWANAFAIFEDVIRDGLKPDVVLYNNIIRAFCGMDNIDRAVCIVEEMKKERHRPT 582

Query: 721  TRTFMPIIHGFARAGETRRALDVFDMMRMSGCVPTVHTFNALILGLVEKLQIEKAGEILD 900
            +RTFMPIIH FA+AGE R+ALDVFDMMR SGC+PTV TFNALILGL EK Q+EKA E+LD
Sbjct: 583  SRTFMPIIHAFAKAGEIRKALDVFDMMRRSGCIPTVQTFNALILGLAEKRQMEKAVEVLD 642

Query: 901  EMLLADVRPNKHTYTTIMHGYASVGDTGKAFEYFTKLKNEGLELDVYTYEALLKACCKSG 1080
            EMLLA +RPN+ TYTTIM GYAS+GDTGKAFEYF+++K+EGLELD+YTYEALLKACCK+G
Sbjct: 643  EMLLAGIRPNERTYTTIMDGYASLGDTGKAFEYFSRIKDEGLELDIYTYEALLKACCKAG 702

Query: 1081 RMQSALAVTKEMNKQGIPRNTFVYNILIDGWARRGDIWEAADLMQQMRQEGVQPDIRTYT 1260
            RMQSALAVTKEM+ + IPRNT+VYNILIDGWARRGD+WEAADLMQQMRQEGVQPDI TYT
Sbjct: 703  RMQSALAVTKEMSAKNIPRNTYVYNILIDGWARRGDVWEAADLMQQMRQEGVQPDIHTYT 762

Query: 1261 SFINACCKAGDMPRATKTIEEMEAFGVKPNVKTYTTLIHGWARASLPEKALKCFEDMKKA 1440
            SF+NACCKAGDM +AT TI EM+  GVKPNVKTYTTLIHGWARASLPEKALKCFE+MK++
Sbjct: 763  SFVNACCKAGDMQKATNTILEMKRVGVKPNVKTYTTLIHGWARASLPEKALKCFEEMKRS 822

Query: 1441 GLQPDKAVYHCLMTSLLSRATVAEDYVYTGILHLCGEMVEAGMTVDMGTAVHWSRCLRKI 1620
            GL+PDKAVYHCLMTSLLSRATVAE Y+  GI  +C EMVE+G+TVDMGTAVHWSRCLRKI
Sbjct: 823  GLKPDKAVYHCLMTSLLSRATVAEYYIIEGIHRVCEEMVESGLTVDMGTAVHWSRCLRKI 882

Query: 1621 ERTGGGITEALQKTFPPDWNSHKTLNAISNTDVHFDGSDANDYDDNLLHEDSNSDNETD 1797
            ERTGG +TEALQKTFPPDWNSH+ LNA SN   +   SD +DYDD   +E ++SD+ET+
Sbjct: 883  ERTGGDLTEALQKTFPPDWNSHRNLNAASNDTGNTGASDNDDYDDGPFYE-TDSDDETN 940



 Score =  190 bits (482), Expect = 3e-45
 Identities = 110/387 (28%), Positives = 203/387 (52%)
 Frame = +1

Query: 319  MMDGYTMKGDEERCLVVFERLKECSLTPSVVSYGCLINLYVKGGKVSKALEVSKMMKLAG 498
            M++ Y  +GD  R    FE+++   + P+V  Y  LI+ Y     + +AL   + MK  G
Sbjct: 309  MVNYYGRRGDMHRARETFEKMRARGIEPTVHVYTNLIHAYAVARDMEEALSCVRRMKDEG 368

Query: 499  IKHNMKTYSMLINGFIKLKDWSNAFAIFEDVIKDGLKPDVILYNNIIRAFCGMGNMDRAI 678
            I+ ++ T+S+L++GF KL +   A   F++  +     + I+Y +II A C   NMDRA 
Sbjct: 369  IEMSLVTHSILVDGFAKLGNIEAAEQWFKEAKERHPTLNAIIYGSIIYANCQTCNMDRAE 428

Query: 679  RTVEEMKRARYKPTTRTFMPIIHGFARAGETRRALDVFDMMRMSGCVPTVHTFNALILGL 858
              V EM+          +  ++ G+   G   + L V+D ++  G  P+V ++  L+   
Sbjct: 429  ELVREMEEEGIDAPIDIYHIMMDGYTSIGNEDKCLIVYDRLKECGFTPSVVSYGCLMNLY 488

Query: 859  VEKLQIEKAGEILDEMLLADVRPNKHTYTTIMHGYASVGDTGKAFEYFTKLKNEGLELDV 1038
            ++  ++ KA E+ + M LA ++ N  TY+ +++G+ ++ D   AF  F  +  +GL+ DV
Sbjct: 489  IKVGKVSKAFEVSEMMKLAGIKHNMKTYSMLINGFINLKDWANAFAIFEDVIRDGLKPDV 548

Query: 1039 YTYEALLKACCKSGRMQSALAVTKEMNKQGIPRNTFVYNILIDGWARRGDIWEAADLMQQ 1218
              Y  +++A C    +  A+ + +EM K+     +  +  +I  +A+ G+I +A D+   
Sbjct: 549  VLYNNIIRAFCGMDNIDRAVCIVEEMKKERHRPTSRTFMPIIHAFAKAGEIRKALDVFDM 608

Query: 1219 MRQEGVQPDIRTYTSFINACCKAGDMPRATKTIEEMEAFGVKPNVKTYTTLIHGWARASL 1398
            MR+ G  P ++T+ + I    +   M +A + ++EM   G++PN +TYTT++ G+A    
Sbjct: 609  MRRSGCIPTVQTFNALILGLAEKRQMEKAVEVLDEMLLAGIRPNERTYTTIMDGYASLGD 668

Query: 1399 PEKALKCFEDMKKAGLQPDKAVYHCLM 1479
              KA + F  +K  GL+ D   Y  L+
Sbjct: 669  TGKAFEYFSRIKDEGLELDIYTYEALL 695



 Score = 98.2 bits (243), Expect = 1e-17
 Identities = 54/209 (25%), Positives = 105/209 (50%)
 Frame = +1

Query: 922  RPNKHTYTTIMHGYASVGDTGKAFEYFTKLKNEGLELDVYTYEALLKACCKSGRMQSALA 1101
            +P++  +  +++ Y   GD  +A E F K++  G+E  V+ Y  L+ A   +  M+ AL+
Sbjct: 300  KPSRKEFGLMVNYYGRRGDMHRARETFEKMRARGIEPTVHVYTNLIHAYAVARDMEEALS 359

Query: 1102 VTKEMNKQGIPRNTFVYNILIDGWARRGDIWEAADLMQQMRQEGVQPDIRTYTSFINACC 1281
              + M  +GI  +   ++IL+DG+A+ G+I  A    ++ ++     +   Y S I A C
Sbjct: 360  CVRRMKDEGIEMSLVTHSILVDGFAKLGNIEAAEQWFKEAKERHPTLNAIIYGSIIYANC 419

Query: 1282 KAGDMPRATKTIEEMEAFGVKPNVKTYTTLIHGWARASLPEKALKCFEDMKKAGLQPDKA 1461
            +  +M RA + + EME  G+   +  Y  ++ G+      +K L  ++ +K+ G  P   
Sbjct: 420  QTCNMDRAEELVREMEEEGIDAPIDIYHIMMDGYTSIGNEDKCLIVYDRLKECGFTPSVV 479

Query: 1462 VYHCLMTSLLSRATVAEDYVYTGILHLCG 1548
             Y CLM   +    V++ +  + ++ L G
Sbjct: 480  SYGCLMNLYIKVGKVSKAFEVSEMMKLAG 508


>gb|EOY19266.1| Pentatricopeptide repeat-containing protein isoform 1 [Theobroma
            cacao]
          Length = 944

 Score =  962 bits (2487), Expect = 0.0
 Identities = 463/601 (77%), Positives = 529/601 (88%)
 Frame = +1

Query: 1    SLIHAYAVGRDMEEALSCMRKMKDEGVELSLVTYSIIVGGFARVGDVEAAEFWFKEARER 180
            +LIHAYAVGRDMEEALSC+RKMK+EG+E++LVTYSI+VGGFA++G+ EAA+ WFKEA+ER
Sbjct: 337  NLIHAYAVGRDMEEALSCVRKMKEEGIEMTLVTYSILVGGFAKIGNSEAADHWFKEAKER 396

Query: 181  HETLXXXXXXXXXXXXCQNCRMDRAEALVREMEEEGIDAPIDIYHTMMDGYTMKGDEERC 360
            H  L            CQ C M+RAEALVREMEEEGIDAPIDIYHTMMDGYTM G+EE+C
Sbjct: 397  HTPLNAIIYGNIIYAHCQTCNMERAEALVREMEEEGIDAPIDIYHTMMDGYTMIGNEEKC 456

Query: 361  LVVFERLKECSLTPSVVSYGCLINLYVKGGKVSKALEVSKMMKLAGIKHNMKTYSMLING 540
            L+VFERLKEC   PSV+SYGCLINLY K GKVSKALEVSKMM+  GIKHNMKTYSMLING
Sbjct: 457  LIVFERLKECGFIPSVISYGCLINLYSKIGKVSKALEVSKMMECDGIKHNMKTYSMLING 516

Query: 541  FIKLKDWSNAFAIFEDVIKDGLKPDVILYNNIIRAFCGMGNMDRAIRTVEEMKRARYKPT 720
            F+KLKDW+NAFAIFED+++DGLKPDV+LYNNIIRAFCGMGNMDRAI TV+EM + R++PT
Sbjct: 517  FLKLKDWANAFAIFEDLVEDGLKPDVVLYNNIIRAFCGMGNMDRAIHTVKEMLKERHRPT 576

Query: 721  TRTFMPIIHGFARAGETRRALDVFDMMRMSGCVPTVHTFNALILGLVEKLQIEKAGEILD 900
            TRTFMPIIH FARAGE RRA +VFD+MR SGC PTVHTFNALILGL EK Q+EKA EILD
Sbjct: 577  TRTFMPIIHAFARAGEMRRAWEVFDVMRRSGCSPTVHTFNALILGLTEKRQMEKAVEILD 636

Query: 901  EMLLADVRPNKHTYTTIMHGYASVGDTGKAFEYFTKLKNEGLELDVYTYEALLKACCKSG 1080
            EM LA + PN+HTYTTIMHGYAS+GDT KAF YFTKL+NEGLE+DVYTYEALLKACCKSG
Sbjct: 637  EMTLAGISPNEHTYTTIMHGYASLGDTAKAFGYFTKLRNEGLEIDVYTYEALLKACCKSG 696

Query: 1081 RMQSALAVTKEMNKQGIPRNTFVYNILIDGWARRGDIWEAADLMQQMRQEGVQPDIRTYT 1260
            RMQSALAVTKEM+ + IPRNTFVYNIL+DGWARRGD+WEAADLMQQM+QEGVQPDI TYT
Sbjct: 697  RMQSALAVTKEMSARKIPRNTFVYNILVDGWARRGDVWEAADLMQQMKQEGVQPDIHTYT 756

Query: 1261 SFINACCKAGDMPRATKTIEEMEAFGVKPNVKTYTTLIHGWARASLPEKALKCFEDMKKA 1440
            SFINACCKAGDM RA KTI+EM+A GVKPNVKTYTTLIHGWARASLPEKALKCFE+MK A
Sbjct: 757  SFINACCKAGDMLRAMKTIQEMDAIGVKPNVKTYTTLIHGWARASLPEKALKCFEEMKLA 816

Query: 1441 GLQPDKAVYHCLMTSLLSRATVAEDYVYTGILHLCGEMVEAGMTVDMGTAVHWSRCLRKI 1620
            GL+PDKAVYHCLMTSLLSRAT AE Y+Y+G+L +C EM+++G+TVDMGTAVHWSRCLRKI
Sbjct: 817  GLKPDKAVYHCLMTSLLSRATFAEAYIYSGVLSVCREMIDSGLTVDMGTAVHWSRCLRKI 876

Query: 1621 ERTGGGITEALQKTFPPDWNSHKTLNAISNTDVHFDGSDANDYDDNLLHEDSNSDNETDF 1800
            ERTGG +TEALQKTFPPDW+S+ T+ A  N+D   D    +D+DDN ++  + ++ + D 
Sbjct: 877  ERTGGELTEALQKTFPPDWSSYHTIAA--NSDTETDDELESDHDDNDVYFANVTEGDHDL 934

Query: 1801 D 1803
            D
Sbjct: 935  D 935



 Score =  193 bits (491), Expect = 2e-46
 Identities = 116/388 (29%), Positives = 195/388 (50%), Gaps = 1/388 (0%)
 Frame = +1

Query: 319  MMDGYTMKGDEERCLVVFERLKECSLTPSVVSYGCLINLYVKGGKVSKALEVSKMMKLAG 498
            M++ Y  +GD  R    FER++   + P+   Y  LI+ Y  G  + +AL   + MK  G
Sbjct: 303  MVNYYARRGDMHRARETFERMRARGIEPTSHVYTNLIHAYAVGRDMEEALSCVRKMKEEG 362

Query: 499  IKHNMKTYSMLINGFIKLKDWSNAFAIFEDVIKDGLKPDVILYNNIIRAFCGMGNMDRAI 678
            I+  + TYS+L+ GF K+ +   A   F++  +     + I+Y NII A C   NM+RA 
Sbjct: 363  IEMTLVTYSILVGGFAKIGNSEAADHWFKEAKERHTPLNAIIYGNIIYAHCQTCNMERAE 422

Query: 679  RTVEEMKRARYKPTTRTFMPIIHGFARAGETRRALDVFDMMRMSGCVPTVHTFNALILGL 858
              V EM+          +  ++ G+   G   + L VF+ ++  G +P+V ++  LI  L
Sbjct: 423  ALVREMEEEGIDAPIDIYHTMMDGYTMIGNEEKCLIVFERLKECGFIPSVISYGCLI-NL 481

Query: 859  VEKL-QIEKAGEILDEMLLADVRPNKHTYTTIMHGYASVGDTGKAFEYFTKLKNEGLELD 1035
              K+ ++ KA E+   M    ++ N  TY+ +++G+  + D   AF  F  L  +GL+ D
Sbjct: 482  YSKIGKVSKALEVSKMMECDGIKHNMKTYSMLINGFLKLKDWANAFAIFEDLVEDGLKPD 541

Query: 1036 VYTYEALLKACCKSGRMQSALAVTKEMNKQGIPRNTFVYNILIDGWARRGDIWEAADLMQ 1215
            V  Y  +++A C  G M  A+   KEM K+     T  +  +I  +AR G++  A ++  
Sbjct: 542  VVLYNNIIRAFCGMGNMDRAIHTVKEMLKERHRPTTRTFMPIIHAFARAGEMRRAWEVFD 601

Query: 1216 QMRQEGVQPDIRTYTSFINACCKAGDMPRATKTIEEMEAFGVKPNVKTYTTLIHGWARAS 1395
             MR+ G  P + T+ + I    +   M +A + ++EM   G+ PN  TYTT++HG+A   
Sbjct: 602  VMRRSGCSPTVHTFNALILGLTEKRQMEKAVEILDEMTLAGISPNEHTYTTIMHGYASLG 661

Query: 1396 LPEKALKCFEDMKKAGLQPDKAVYHCLM 1479
               KA   F  ++  GL+ D   Y  L+
Sbjct: 662  DTAKAFGYFTKLRNEGLEIDVYTYEALL 689



 Score =  106 bits (264), Expect = 5e-20
 Identities = 71/288 (24%), Positives = 124/288 (43%), Gaps = 35/288 (12%)
 Frame = +1

Query: 712  KPTTRTFMPIIHGFARAGETRRALDVFDMMRMSGCVPTVHTFNALILGLVEKLQIEKAGE 891
            KP  R F  +++ +AR G+  RA + F+ MR  G                          
Sbjct: 294  KPARREFGLMVNYYARRGDMHRARETFERMRARG-------------------------- 327

Query: 892  ILDEMLLADVRPNKHTYTTIMHGYASVGDTGKAFEYFTKLKNEGLELDVYTYEAL----- 1056
                     + P  H YT ++H YA   D  +A     K+K EG+E+ + TY  L     
Sbjct: 328  ---------IEPTSHVYTNLIHAYAVGRDMEEALSCVRKMKEEGIEMTLVTYSILVGGFA 378

Query: 1057 ------------------------------LKACCKSGRMQSALAVTKEMNKQGIPRNTF 1146
                                          + A C++  M+ A A+ +EM ++GI     
Sbjct: 379  KIGNSEAADHWFKEAKERHTPLNAIIYGNIIYAHCQTCNMERAEALVREMEEEGIDAPID 438

Query: 1147 VYNILIDGWARRGDIWEAADLMQQMRQEGVQPDIRTYTSFINACCKAGDMPRATKTIEEM 1326
            +Y+ ++DG+   G+  +   + +++++ G  P + +Y   IN   K G + +A +  + M
Sbjct: 439  IYHTMMDGYTMIGNEEKCLIVFERLKECGFIPSVISYGCLINLYSKIGKVSKALEVSKMM 498

Query: 1327 EAFGVKPNVKTYTTLIHGWARASLPEKALKCFEDMKKAGLQPDKAVYH 1470
            E  G+K N+KTY+ LI+G+ +      A   FED+ + GL+PD  +Y+
Sbjct: 499  ECDGIKHNMKTYSMLINGFLKLKDWANAFAIFEDLVEDGLKPDVVLYN 546


>ref|XP_002316488.2| hypothetical protein POPTR_0010s24770g [Populus trichocarpa]
            gi|550330544|gb|EEF02659.2| hypothetical protein
            POPTR_0010s24770g [Populus trichocarpa]
          Length = 947

 Score =  951 bits (2458), Expect = 0.0
 Identities = 459/600 (76%), Positives = 523/600 (87%), Gaps = 1/600 (0%)
 Frame = +1

Query: 1    SLIHAYAVGRDMEEALSCMRKMKDEGVELSLVTYSIIVGGFARVGDVEAAEFWFKEARER 180
            SLIHAYAVGRDMEEALSC+RKM +EG+E+SLVTYSI+VGGFA+ G+ EAA+ WFK+A+ER
Sbjct: 334  SLIHAYAVGRDMEEALSCVRKMNEEGIEMSLVTYSIVVGGFAKFGNAEAADCWFKKAKER 393

Query: 181  HETLXXXXXXXXXXXXCQNCRMDRAEALVREMEEEGIDAPIDIYHTMMDGYTMKGDEERC 360
            H  L            CQ C MDRAEALVREMEEEGIDAP+DIYHTMMDGYTM  +EE+C
Sbjct: 394  HTNLNAYIYGNIIYAYCQACNMDRAEALVREMEEEGIDAPLDIYHTMMDGYTMIRNEEKC 453

Query: 361  LVVFERLKECSLTPSVVSYGCLINLYVKGGKVSKALEVSKMMKLAGIKHNMKTYSMLING 540
            L+VF+RLKEC   PSV++YGCLIN+Y K GKVSKALEVSKMMK  GIKHNMKTYSMLING
Sbjct: 454  LIVFKRLKECGFAPSVITYGCLINMYTKIGKVSKALEVSKMMKSVGIKHNMKTYSMLING 513

Query: 541  FIKLKDWSNAFAIFEDVIKDGLKPDVILYNNIIRAFCGMGNMDRAIRTVEEMKRARYKPT 720
            F+KLKDW+NAFA+FEDVIKDGLKPDV+LYNNII+AFCGMGNMDRAI  V+EM++ R +PT
Sbjct: 514  FLKLKDWTNAFAVFEDVIKDGLKPDVVLYNNIIKAFCGMGNMDRAIHMVKEMQKERCRPT 573

Query: 721  TRTFMPIIHGFARAGETRRALDVFDMMRMSGCVPTVHTFNALILGLVEKLQIEKAGEILD 900
            +RTFMPIIHGFARAGE RRAL++FDMMR SGC+PTVHTFNAL+LGLVEK ++EKA EILD
Sbjct: 574  SRTFMPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTFNALVLGLVEKRKMEKAVEILD 633

Query: 901  EMLLADVRPNKHTYTTIMHGYASVGDTGKAFEYFTKLKNEGLELDVYTYEALLKACCKSG 1080
            EM LA V P++HTYTTIMHGYA++GDTGKAFEYFTK++NEGL+LDV+TYEALLKACCKSG
Sbjct: 634  EMALAGVSPDEHTYTTIMHGYAALGDTGKAFEYFTKMRNEGLQLDVFTYEALLKACCKSG 693

Query: 1081 RMQSALAVTKEMNKQGIPRNTFVYNILIDGWARRGDIWEAADLMQQMRQEGVQPDIRTYT 1260
            RMQSALAVT+EMN Q IPRNTFVYNILIDGWARRGDIWEAADLMQQM QEGVQPDI TYT
Sbjct: 694  RMQSALAVTREMNAQKIPRNTFVYNILIDGWARRGDIWEAADLMQQMNQEGVQPDIHTYT 753

Query: 1261 SFINACCKAGDMPRATKTIEEMEAFGVKPNVKTYTTLIHGWARASLPEKALKCFEDMKKA 1440
            SFINACCKAGDM RATKT+EEMEA GVKPNVKTYTTLIHGWA ASLPEKAL CFE++K A
Sbjct: 754  SFINACCKAGDMLRATKTMEEMEAAGVKPNVKTYTTLIHGWANASLPEKALSCFEELKLA 813

Query: 1441 GLQPDKAVYHCLMTSLLSRATVAEDYVYTGILHLCGEMVEAGMTVDMGTAVHWSRCLRKI 1620
            GL+PDKAVYHCLMTSLLSRATVAE Y+Y+GIL +C EM+E  +TVDMGTAV+WS+CLRKI
Sbjct: 814  GLKPDKAVYHCLMTSLLSRATVAEAYIYSGILSICREMIEFELTVDMGTAVYWSKCLRKI 873

Query: 1621 ERTGGGITEALQKTFPPDWNSHKTLNAISNTDVHFDGSDANDYDDNLLH-EDSNSDNETD 1797
            ER GG +T+ LQKTFPPDWN+H +L A   +D++ + S   D D  L    D + D+E D
Sbjct: 874  ERIGGELTQTLQKTFPPDWNTHHSLEANHESDINDEPSIHGDNDMFLAGVNDGDGDDEDD 933



 Score =  191 bits (484), Expect = 2e-45
 Identities = 113/387 (29%), Positives = 189/387 (48%)
 Frame = +1

Query: 319  MMDGYTMKGDEERCLVVFERLKECSLTPSVVSYGCLINLYVKGGKVSKALEVSKMMKLAG 498
            M+  Y  +GD  R    FE ++   + PS   Y  LI+ Y  G  + +AL   + M   G
Sbjct: 300  MVGYYARRGDMHRARQTFESMRARGIDPSSHVYTSLIHAYAVGRDMEEALSCVRKMNEEG 359

Query: 499  IKHNMKTYSMLINGFIKLKDWSNAFAIFEDVIKDGLKPDVILYNNIIRAFCGMGNMDRAI 678
            I+ ++ TYS+++ GF K  +   A   F+   +     +  +Y NII A+C   NMDRA 
Sbjct: 360  IEMSLVTYSIVVGGFAKFGNAEAADCWFKKAKERHTNLNAYIYGNIIYAYCQACNMDRAE 419

Query: 679  RTVEEMKRARYKPTTRTFMPIIHGFARAGETRRALDVFDMMRMSGCVPTVHTFNALILGL 858
              V EM+          +  ++ G+       + L VF  ++  G  P+V T+  LI   
Sbjct: 420  ALVREMEEEGIDAPLDIYHTMMDGYTMIRNEEKCLIVFKRLKECGFAPSVITYGCLINMY 479

Query: 859  VEKLQIEKAGEILDEMLLADVRPNKHTYTTIMHGYASVGDTGKAFEYFTKLKNEGLELDV 1038
             +  ++ KA E+   M    ++ N  TY+ +++G+  + D   AF  F  +  +GL+ DV
Sbjct: 480  TKIGKVSKALEVSKMMKSVGIKHNMKTYSMLINGFLKLKDWTNAFAVFEDVIKDGLKPDV 539

Query: 1039 YTYEALLKACCKSGRMQSALAVTKEMNKQGIPRNTFVYNILIDGWARRGDIWEAADLMQQ 1218
              Y  ++KA C  G M  A+ + KEM K+     +  +  +I G+AR G++  A ++   
Sbjct: 540  VLYNNIIKAFCGMGNMDRAIHMVKEMQKERCRPTSRTFMPIIHGFARAGEMRRALEIFDM 599

Query: 1219 MRQEGVQPDIRTYTSFINACCKAGDMPRATKTIEEMEAFGVKPNVKTYTTLIHGWARASL 1398
            MR+ G  P + T+ + +    +   M +A + ++EM   GV P+  TYTT++HG+A    
Sbjct: 600  MRRSGCIPTVHTFNALVLGLVEKRKMEKAVEILDEMALAGVSPDEHTYTTIMHGYAALGD 659

Query: 1399 PEKALKCFEDMKKAGLQPDKAVYHCLM 1479
              KA + F  M+  GLQ D   Y  L+
Sbjct: 660  TGKAFEYFTKMRNEGLQLDVFTYEALL 686



 Score =  140 bits (352), Expect = 3e-30
 Identities = 88/385 (22%), Positives = 178/385 (46%)
 Frame = +1

Query: 370  FERLKECSLTPSVVSYGCLINLYVKGGKVSKALEVSKMMKLAGIKHNMKTYSMLINGFIK 549
            FER+K+    PS   +G ++  Y + G + +A +  + M+  GI  +   Y+ LI+ +  
Sbjct: 286  FERIKK----PSRREFGLMVGYYARRGDMHRARQTFESMRARGIDPSSHVYTSLIHAYAV 341

Query: 550  LKDWSNAFAIFEDVIKDGLKPDVILYNNIIRAFCGMGNMDRAIRTVEEMKRARYKPTTRT 729
             +D   A +    + ++G++  ++ Y+ ++  F   GN + A    ++ K          
Sbjct: 342  GRDMEEALSCVRKMNEEGIEMSLVTYSIVVGGFAKFGNAEAADCWFKKAKERHTNLNAYI 401

Query: 730  FMPIIHGFARAGETRRALDVFDMMRMSGCVPTVHTFNALILGLVEKLQIEKAGEILDEML 909
            +  II+ + +A    RA  +   M   G    +  ++ ++ G       EK   +   + 
Sbjct: 402  YGNIIYAYCQACNMDRAEALVREMEEEGIDAPLDIYHTMMDGYTMIRNEEKCLIVFKRLK 461

Query: 910  LADVRPNKHTYTTIMHGYASVGDTGKAFEYFTKLKNEGLELDVYTYEALLKACCKSGRMQ 1089
                 P+  TY  +++ Y  +G   KA E    +K+ G++ ++ TY  L+    K     
Sbjct: 462  ECGFAPSVITYGCLINMYTKIGKVSKALEVSKMMKSVGIKHNMKTYSMLINGFLKLKDWT 521

Query: 1090 SALAVTKEMNKQGIPRNTFVYNILIDGWARRGDIWEAADLMQQMRQEGVQPDIRTYTSFI 1269
            +A AV +++ K G+  +  +YN +I  +   G++  A  ++++M++E  +P  RT+   I
Sbjct: 522  NAFAVFEDVIKDGLKPDVVLYNNIIKAFCGMGNMDRAIHMVKEMQKERCRPTSRTFMPII 581

Query: 1270 NACCKAGDMPRATKTIEEMEAFGVKPNVKTYTTLIHGWARASLPEKALKCFEDMKKAGLQ 1449
            +   +AG+M RA +  + M   G  P V T+  L+ G       EKA++  ++M  AG+ 
Sbjct: 582  HGFARAGEMRRALEIFDMMRRSGCIPTVHTFNALVLGLVEKRKMEKAVEILDEMALAGVS 641

Query: 1450 PDKAVYHCLMTSLLSRATVAEDYVY 1524
            PD+  Y  +M    +     + + Y
Sbjct: 642  PDEHTYTTIMHGYAALGDTGKAFEY 666


>ref|XP_006367146.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
            chloroplastic-like isoform X2 [Solanum tuberosum]
            gi|565403397|ref|XP_006367147.1| PREDICTED:
            pentatricopeptide repeat-containing protein At5g04810,
            chloroplastic-like isoform X3 [Solanum tuberosum]
          Length = 629

 Score =  948 bits (2451), Expect = 0.0
 Identities = 454/591 (76%), Positives = 522/591 (88%), Gaps = 1/591 (0%)
 Frame = +1

Query: 1    SLIHAYAVGRDMEEALSCMRKMKDEGVELSLVTYSIIVGGFARVGDVEAAEFWFKEARER 180
            +LIHAYAVGRDMEEAL C+RKMKDEG+ELSLVTYSI++GGFA+VG++EAAE WF+EA++R
Sbjct: 35   NLIHAYAVGRDMEEALCCVRKMKDEGIELSLVTYSILIGGFAKVGNIEAAERWFEEAKKR 94

Query: 181  HETLXXXXXXXXXXXXCQNCRMDRAEALVREMEEEGIDAPIDIYHTMMDGYTMKGDEERC 360
              TL            CQ   MDRAE LVREMEEE IDAPIDIYHTMMDGYTM G+EE+C
Sbjct: 95   DLTLNAIIYGNIIYANCQTFNMDRAEELVREMEEEDIDAPIDIYHTMMDGYTMIGNEEKC 154

Query: 361  LVVFERLKECSLTPSVVSYGCLINLYVKGGKVSKALEVSKMMKLAGIKHNMKTYSMLING 540
            L+VF+RLKEC  TPSVVSYGCL+NLY+K GKVSKA EVS+MMKLAGIKHNMKTYS+L+NG
Sbjct: 155  LIVFDRLKECGFTPSVVSYGCLMNLYIKIGKVSKAFEVSEMMKLAGIKHNMKTYSILMNG 214

Query: 541  FIKLKDWSNAFAIFEDVIKDGLKPDVILYNNIIRAFCGMGNMDRAIRTVEEMKRARYKPT 720
            FI LKDW+NAFAIFEDVI+DGLKPDV+LYNNIIRAFCGMGN+DRA+R VEEMK+ R+ P 
Sbjct: 215  FINLKDWANAFAIFEDVIRDGLKPDVVLYNNIIRAFCGMGNLDRALRIVEEMKKERHMPN 274

Query: 721  TRTFMPIIHGFARAGETRRALDVFDMMRMSGCVPTVHTFNALILGLVEKLQIEKAGEILD 900
            +RTFMPIIH FA+AGE RRALDVFDMMR SGC+P+VHTFNAL+LGLVEK Q+EKA +ILD
Sbjct: 275  SRTFMPIIHAFAKAGEVRRALDVFDMMRRSGCIPSVHTFNALVLGLVEKRQMEKAVQILD 334

Query: 901  EMLLADVRPNKHTYTTIMHGYASVGDTGKAFEYFTKLKNEGLELDVYTYEALLKACCKSG 1080
            +MLLA V PN++TYTTIMHGYAS+GD GKA EYF+K+KNEGLELD+YTYEALLKACCKSG
Sbjct: 335  DMLLAGVSPNEYTYTTIMHGYASLGDIGKACEYFSKVKNEGLELDIYTYEALLKACCKSG 394

Query: 1081 RMQSALAVTKEMNKQGIPRNTFVYNILIDGWARRGDIWEAADLMQQMRQEGVQPDIRTYT 1260
            RMQSAL VTKEM+ + IPRNTFVYNILIDGWARRGD+WEAADLMQQMRQEGV PDI T+T
Sbjct: 395  RMQSALMVTKEMSAKSIPRNTFVYNILIDGWARRGDVWEAADLMQQMRQEGVPPDIHTFT 454

Query: 1261 SFINACCKAGDMPRATKTIEEMEAFGVKPNVKTYTTLIHGWARASLPEKALKCFEDMKKA 1440
            SFINACCKAGDM RA + +EEME  G+KPN+KTYTTLIHGWARASLPEK LKCFE MK++
Sbjct: 455  SFINACCKAGDMQRAMRAVEEMETVGIKPNLKTYTTLIHGWARASLPEKGLKCFEQMKQS 514

Query: 1441 GLQPDKAVYHCLMTSLLSRATVA-EDYVYTGILHLCGEMVEAGMTVDMGTAVHWSRCLRK 1617
            GL+PDKAVYHCLMTSLLSRA  A +DY+ TGI H+C EMVE+G+TVDMGTAVHWS+CLRK
Sbjct: 515  GLKPDKAVYHCLMTSLLSRAAFADQDYIITGIQHVCEEMVESGLTVDMGTAVHWSKCLRK 574

Query: 1618 IERTGGGITEALQKTFPPDWNSHKTLNAISNTDVHFDGSDANDYDDNLLHE 1770
            IERTGG IT++LQKTFPPDW SH+TLNA SN + + +GSD+ D + +  +E
Sbjct: 575  IERTGGDITKSLQKTFPPDWGSHRTLNATSNDNENEEGSDSGDDERSSFYE 625



 Score =  201 bits (512), Expect = 9e-49
 Identities = 118/387 (30%), Positives = 200/387 (51%)
 Frame = +1

Query: 319  MMDGYTMKGDEERCLVVFERLKECSLTPSVVSYGCLINLYVKGGKVSKALEVSKMMKLAG 498
            M++ Y  + D  R    FE++    + P+   Y  LI+ Y  G  + +AL   + MK  G
Sbjct: 1    MVNYYARRSDMHRARETFEKMCARGIEPTSHVYTNLIHAYAVGRDMEEALCCVRKMKDEG 60

Query: 499  IKHNMKTYSMLINGFIKLKDWSNAFAIFEDVIKDGLKPDVILYNNIIRAFCGMGNMDRAI 678
            I+ ++ TYS+LI GF K+ +   A   FE+  K  L  + I+Y NII A C   NMDRA 
Sbjct: 61   IELSLVTYSILIGGFAKVGNIEAAERWFEEAKKRDLTLNAIIYGNIIYANCQTFNMDRAE 120

Query: 679  RTVEEMKRARYKPTTRTFMPIIHGFARAGETRRALDVFDMMRMSGCVPTVHTFNALILGL 858
              V EM+          +  ++ G+   G   + L VFD ++  G  P+V ++  L+   
Sbjct: 121  ELVREMEEEDIDAPIDIYHTMMDGYTMIGNEEKCLIVFDRLKECGFTPSVVSYGCLMNLY 180

Query: 859  VEKLQIEKAGEILDEMLLADVRPNKHTYTTIMHGYASVGDTGKAFEYFTKLKNEGLELDV 1038
            ++  ++ KA E+ + M LA ++ N  TY+ +M+G+ ++ D   AF  F  +  +GL+ DV
Sbjct: 181  IKIGKVSKAFEVSEMMKLAGIKHNMKTYSILMNGFINLKDWANAFAIFEDVIRDGLKPDV 240

Query: 1039 YTYEALLKACCKSGRMQSALAVTKEMNKQGIPRNTFVYNILIDGWARRGDIWEAADLMQQ 1218
              Y  +++A C  G +  AL + +EM K+    N+  +  +I  +A+ G++  A D+   
Sbjct: 241  VLYNNIIRAFCGMGNLDRALRIVEEMKKERHMPNSRTFMPIIHAFAKAGEVRRALDVFDM 300

Query: 1219 MRQEGVQPDIRTYTSFINACCKAGDMPRATKTIEEMEAFGVKPNVKTYTTLIHGWARASL 1398
            MR+ G  P + T+ + +    +   M +A + +++M   GV PN  TYTT++HG+A    
Sbjct: 301  MRRSGCIPSVHTFNALVLGLVEKRQMEKAVQILDDMLLAGVSPNEYTYTTIMHGYASLGD 360

Query: 1399 PEKALKCFEDMKKAGLQPDKAVYHCLM 1479
              KA + F  +K  GL+ D   Y  L+
Sbjct: 361  IGKACEYFSKVKNEGLELDIYTYEALL 387



 Score =  148 bits (373), Expect = 1e-32
 Identities = 91/353 (25%), Positives = 168/353 (47%), Gaps = 16/353 (4%)
 Frame = +1

Query: 529  LINGFIKLKDWSNAFAIFEDVIKDGLKPDVILYNNIIRAFCGMGNMDRAIRTVEEMKRAR 708
            ++N + +  D   A   FE +   G++P   +Y N+I A+    +M+ A+  V +MK   
Sbjct: 1    MVNYYARRSDMHRARETFEKMCARGIEPTSHVYTNLIHAYAVGRDMEEALCCVRKMKDEG 60

Query: 709  YKPTTRTFMPIIHGFARAGETRRALDVFDMMRMSGCVPTVHTFNALILGLVEKLQIEKAG 888
             + +  T+  +I GFA+ G    A   F+  +          +  +I    +   +++A 
Sbjct: 61   IELSLVTYSILIGGFAKVGNIEAAERWFEEAKKRDLTLNAIIYGNIIYANCQTFNMDRAE 120

Query: 889  EILDEMLLADVRPNKHTYTTIMHGYASVGDTGKAFEYFTKLKNEGLELDVYTYEALLKAC 1068
            E++ EM   D+      Y T+M GY  +G+  K    F +LK  G    V +Y  L+   
Sbjct: 121  ELVREMEEEDIDAPIDIYHTMMDGYTMIGNEEKCLIVFDRLKECGFTPSVVSYGCLMNLY 180

Query: 1069 CKSGRMQSALAVTKEMNKQGIPRNTFVYNILIDGWARRGDIWEAADLMQQMRQEGVQPDI 1248
             K G++  A  V++ M   GI  N   Y+IL++G+    D   A  + + + ++G++PD+
Sbjct: 181  IKIGKVSKAFEVSEMMKLAGIKHNMKTYSILMNGFINLKDWANAFAIFEDVIRDGLKPDV 240

Query: 1249 RTYTSFINACCKAGDMPRATKTIEEMEAFGVKPNVKTYTTLIHGWARASLPEKALKCFED 1428
              Y + I A C  G++ RA + +EEM+     PN +T+  +IH +A+A    +AL  F+ 
Sbjct: 241  VLYNNIIRAFCGMGNLDRALRIVEEMKKERHMPNSRTFMPIIHAFAKAGEVRRALDVFDM 300

Query: 1429 MKKAGLQPDKAVYHCLMTSLLSRATVAE----------------DYVYTGILH 1539
            M+++G  P    ++ L+  L+ +  + +                +Y YT I+H
Sbjct: 301  MRRSGCIPSVHTFNALVLGLVEKRQMEKAVQILDDMLLAGVSPNEYTYTTIMH 353



 Score = 89.4 bits (220), Expect = 6e-15
 Identities = 54/196 (27%), Positives = 94/196 (47%)
 Frame = +1

Query: 961  YASVGDTGKAFEYFTKLKNEGLELDVYTYEALLKACCKSGRMQSALAVTKEMNKQGIPRN 1140
            YA   D  +A E F K+   G+E   + Y  L+ A      M+ AL   ++M  +GI  +
Sbjct: 5    YARRSDMHRARETFEKMCARGIEPTSHVYTNLIHAYAVGRDMEEALCCVRKMKDEGIELS 64

Query: 1141 TFVYNILIDGWARRGDIWEAADLMQQMRQEGVQPDIRTYTSFINACCKAGDMPRATKTIE 1320
               Y+ILI G+A+ G+I  A    ++ ++  +  +   Y + I A C+  +M RA + + 
Sbjct: 65   LVTYSILIGGFAKVGNIEAAERWFEEAKKRDLTLNAIIYGNIIYANCQTFNMDRAEELVR 124

Query: 1321 EMEAFGVKPNVKTYTTLIHGWARASLPEKALKCFEDMKKAGLQPDKAVYHCLMTSLLSRA 1500
            EME   +   +  Y T++ G+      EK L  F+ +K+ G  P    Y CLM   +   
Sbjct: 125  EMEEEDIDAPIDIYHTMMDGYTMIGNEEKCLIVFDRLKECGFTPSVVSYGCLMNLYIKIG 184

Query: 1501 TVAEDYVYTGILHLCG 1548
             V++ +  + ++ L G
Sbjct: 185  KVSKAFEVSEMMKLAG 200


>ref|XP_006367145.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
            chloroplastic-like isoform X1 [Solanum tuberosum]
          Length = 635

 Score =  948 bits (2451), Expect = 0.0
 Identities = 454/591 (76%), Positives = 522/591 (88%), Gaps = 1/591 (0%)
 Frame = +1

Query: 1    SLIHAYAVGRDMEEALSCMRKMKDEGVELSLVTYSIIVGGFARVGDVEAAEFWFKEARER 180
            +LIHAYAVGRDMEEAL C+RKMKDEG+ELSLVTYSI++GGFA+VG++EAAE WF+EA++R
Sbjct: 41   NLIHAYAVGRDMEEALCCVRKMKDEGIELSLVTYSILIGGFAKVGNIEAAERWFEEAKKR 100

Query: 181  HETLXXXXXXXXXXXXCQNCRMDRAEALVREMEEEGIDAPIDIYHTMMDGYTMKGDEERC 360
              TL            CQ   MDRAE LVREMEEE IDAPIDIYHTMMDGYTM G+EE+C
Sbjct: 101  DLTLNAIIYGNIIYANCQTFNMDRAEELVREMEEEDIDAPIDIYHTMMDGYTMIGNEEKC 160

Query: 361  LVVFERLKECSLTPSVVSYGCLINLYVKGGKVSKALEVSKMMKLAGIKHNMKTYSMLING 540
            L+VF+RLKEC  TPSVVSYGCL+NLY+K GKVSKA EVS+MMKLAGIKHNMKTYS+L+NG
Sbjct: 161  LIVFDRLKECGFTPSVVSYGCLMNLYIKIGKVSKAFEVSEMMKLAGIKHNMKTYSILMNG 220

Query: 541  FIKLKDWSNAFAIFEDVIKDGLKPDVILYNNIIRAFCGMGNMDRAIRTVEEMKRARYKPT 720
            FI LKDW+NAFAIFEDVI+DGLKPDV+LYNNIIRAFCGMGN+DRA+R VEEMK+ R+ P 
Sbjct: 221  FINLKDWANAFAIFEDVIRDGLKPDVVLYNNIIRAFCGMGNLDRALRIVEEMKKERHMPN 280

Query: 721  TRTFMPIIHGFARAGETRRALDVFDMMRMSGCVPTVHTFNALILGLVEKLQIEKAGEILD 900
            +RTFMPIIH FA+AGE RRALDVFDMMR SGC+P+VHTFNAL+LGLVEK Q+EKA +ILD
Sbjct: 281  SRTFMPIIHAFAKAGEVRRALDVFDMMRRSGCIPSVHTFNALVLGLVEKRQMEKAVQILD 340

Query: 901  EMLLADVRPNKHTYTTIMHGYASVGDTGKAFEYFTKLKNEGLELDVYTYEALLKACCKSG 1080
            +MLLA V PN++TYTTIMHGYAS+GD GKA EYF+K+KNEGLELD+YTYEALLKACCKSG
Sbjct: 341  DMLLAGVSPNEYTYTTIMHGYASLGDIGKACEYFSKVKNEGLELDIYTYEALLKACCKSG 400

Query: 1081 RMQSALAVTKEMNKQGIPRNTFVYNILIDGWARRGDIWEAADLMQQMRQEGVQPDIRTYT 1260
            RMQSAL VTKEM+ + IPRNTFVYNILIDGWARRGD+WEAADLMQQMRQEGV PDI T+T
Sbjct: 401  RMQSALMVTKEMSAKSIPRNTFVYNILIDGWARRGDVWEAADLMQQMRQEGVPPDIHTFT 460

Query: 1261 SFINACCKAGDMPRATKTIEEMEAFGVKPNVKTYTTLIHGWARASLPEKALKCFEDMKKA 1440
            SFINACCKAGDM RA + +EEME  G+KPN+KTYTTLIHGWARASLPEK LKCFE MK++
Sbjct: 461  SFINACCKAGDMQRAMRAVEEMETVGIKPNLKTYTTLIHGWARASLPEKGLKCFEQMKQS 520

Query: 1441 GLQPDKAVYHCLMTSLLSRATVA-EDYVYTGILHLCGEMVEAGMTVDMGTAVHWSRCLRK 1617
            GL+PDKAVYHCLMTSLLSRA  A +DY+ TGI H+C EMVE+G+TVDMGTAVHWS+CLRK
Sbjct: 521  GLKPDKAVYHCLMTSLLSRAAFADQDYIITGIQHVCEEMVESGLTVDMGTAVHWSKCLRK 580

Query: 1618 IERTGGGITEALQKTFPPDWNSHKTLNAISNTDVHFDGSDANDYDDNLLHE 1770
            IERTGG IT++LQKTFPPDW SH+TLNA SN + + +GSD+ D + +  +E
Sbjct: 581  IERTGGDITKSLQKTFPPDWGSHRTLNATSNDNENEEGSDSGDDERSSFYE 631



 Score =  201 bits (512), Expect = 9e-49
 Identities = 118/387 (30%), Positives = 200/387 (51%)
 Frame = +1

Query: 319  MMDGYTMKGDEERCLVVFERLKECSLTPSVVSYGCLINLYVKGGKVSKALEVSKMMKLAG 498
            M++ Y  + D  R    FE++    + P+   Y  LI+ Y  G  + +AL   + MK  G
Sbjct: 7    MVNYYARRSDMHRARETFEKMCARGIEPTSHVYTNLIHAYAVGRDMEEALCCVRKMKDEG 66

Query: 499  IKHNMKTYSMLINGFIKLKDWSNAFAIFEDVIKDGLKPDVILYNNIIRAFCGMGNMDRAI 678
            I+ ++ TYS+LI GF K+ +   A   FE+  K  L  + I+Y NII A C   NMDRA 
Sbjct: 67   IELSLVTYSILIGGFAKVGNIEAAERWFEEAKKRDLTLNAIIYGNIIYANCQTFNMDRAE 126

Query: 679  RTVEEMKRARYKPTTRTFMPIIHGFARAGETRRALDVFDMMRMSGCVPTVHTFNALILGL 858
              V EM+          +  ++ G+   G   + L VFD ++  G  P+V ++  L+   
Sbjct: 127  ELVREMEEEDIDAPIDIYHTMMDGYTMIGNEEKCLIVFDRLKECGFTPSVVSYGCLMNLY 186

Query: 859  VEKLQIEKAGEILDEMLLADVRPNKHTYTTIMHGYASVGDTGKAFEYFTKLKNEGLELDV 1038
            ++  ++ KA E+ + M LA ++ N  TY+ +M+G+ ++ D   AF  F  +  +GL+ DV
Sbjct: 187  IKIGKVSKAFEVSEMMKLAGIKHNMKTYSILMNGFINLKDWANAFAIFEDVIRDGLKPDV 246

Query: 1039 YTYEALLKACCKSGRMQSALAVTKEMNKQGIPRNTFVYNILIDGWARRGDIWEAADLMQQ 1218
              Y  +++A C  G +  AL + +EM K+    N+  +  +I  +A+ G++  A D+   
Sbjct: 247  VLYNNIIRAFCGMGNLDRALRIVEEMKKERHMPNSRTFMPIIHAFAKAGEVRRALDVFDM 306

Query: 1219 MRQEGVQPDIRTYTSFINACCKAGDMPRATKTIEEMEAFGVKPNVKTYTTLIHGWARASL 1398
            MR+ G  P + T+ + +    +   M +A + +++M   GV PN  TYTT++HG+A    
Sbjct: 307  MRRSGCIPSVHTFNALVLGLVEKRQMEKAVQILDDMLLAGVSPNEYTYTTIMHGYASLGD 366

Query: 1399 PEKALKCFEDMKKAGLQPDKAVYHCLM 1479
              KA + F  +K  GL+ D   Y  L+
Sbjct: 367  IGKACEYFSKVKNEGLELDIYTYEALL 393



 Score =  153 bits (387), Expect = 3e-34
 Identities = 93/359 (25%), Positives = 172/359 (47%), Gaps = 16/359 (4%)
 Frame = +1

Query: 511  MKTYSMLINGFIKLKDWSNAFAIFEDVIKDGLKPDVILYNNIIRAFCGMGNMDRAIRTVE 690
            MK + +++N + +  D   A   FE +   G++P   +Y N+I A+    +M+ A+  V 
Sbjct: 1    MKEFGLMVNYYARRSDMHRARETFEKMCARGIEPTSHVYTNLIHAYAVGRDMEEALCCVR 60

Query: 691  EMKRARYKPTTRTFMPIIHGFARAGETRRALDVFDMMRMSGCVPTVHTFNALILGLVEKL 870
            +MK    + +  T+  +I GFA+ G    A   F+  +          +  +I    +  
Sbjct: 61   KMKDEGIELSLVTYSILIGGFAKVGNIEAAERWFEEAKKRDLTLNAIIYGNIIYANCQTF 120

Query: 871  QIEKAGEILDEMLLADVRPNKHTYTTIMHGYASVGDTGKAFEYFTKLKNEGLELDVYTYE 1050
             +++A E++ EM   D+      Y T+M GY  +G+  K    F +LK  G    V +Y 
Sbjct: 121  NMDRAEELVREMEEEDIDAPIDIYHTMMDGYTMIGNEEKCLIVFDRLKECGFTPSVVSYG 180

Query: 1051 ALLKACCKSGRMQSALAVTKEMNKQGIPRNTFVYNILIDGWARRGDIWEAADLMQQMRQE 1230
             L+    K G++  A  V++ M   GI  N   Y+IL++G+    D   A  + + + ++
Sbjct: 181  CLMNLYIKIGKVSKAFEVSEMMKLAGIKHNMKTYSILMNGFINLKDWANAFAIFEDVIRD 240

Query: 1231 GVQPDIRTYTSFINACCKAGDMPRATKTIEEMEAFGVKPNVKTYTTLIHGWARASLPEKA 1410
            G++PD+  Y + I A C  G++ RA + +EEM+     PN +T+  +IH +A+A    +A
Sbjct: 241  GLKPDVVLYNNIIRAFCGMGNLDRALRIVEEMKKERHMPNSRTFMPIIHAFAKAGEVRRA 300

Query: 1411 LKCFEDMKKAGLQPDKAVYHCLMTSLLSRATVAE----------------DYVYTGILH 1539
            L  F+ M+++G  P    ++ L+  L+ +  + +                +Y YT I+H
Sbjct: 301  LDVFDMMRRSGCIPSVHTFNALVLGLVEKRQMEKAVQILDDMLLAGVSPNEYTYTTIMH 359



 Score = 89.4 bits (220), Expect = 6e-15
 Identities = 54/196 (27%), Positives = 94/196 (47%)
 Frame = +1

Query: 961  YASVGDTGKAFEYFTKLKNEGLELDVYTYEALLKACCKSGRMQSALAVTKEMNKQGIPRN 1140
            YA   D  +A E F K+   G+E   + Y  L+ A      M+ AL   ++M  +GI  +
Sbjct: 11   YARRSDMHRARETFEKMCARGIEPTSHVYTNLIHAYAVGRDMEEALCCVRKMKDEGIELS 70

Query: 1141 TFVYNILIDGWARRGDIWEAADLMQQMRQEGVQPDIRTYTSFINACCKAGDMPRATKTIE 1320
               Y+ILI G+A+ G+I  A    ++ ++  +  +   Y + I A C+  +M RA + + 
Sbjct: 71   LVTYSILIGGFAKVGNIEAAERWFEEAKKRDLTLNAIIYGNIIYANCQTFNMDRAEELVR 130

Query: 1321 EMEAFGVKPNVKTYTTLIHGWARASLPEKALKCFEDMKKAGLQPDKAVYHCLMTSLLSRA 1500
            EME   +   +  Y T++ G+      EK L  F+ +K+ G  P    Y CLM   +   
Sbjct: 131  EMEEEDIDAPIDIYHTMMDGYTMIGNEEKCLIVFDRLKECGFTPSVVSYGCLMNLYIKIG 190

Query: 1501 TVAEDYVYTGILHLCG 1548
             V++ +  + ++ L G
Sbjct: 191  KVSKAFEVSEMMKLAG 206


>ref|XP_006485466.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
            chloroplastic-like [Citrus sinensis]
          Length = 948

 Score =  948 bits (2450), Expect = 0.0
 Identities = 461/607 (75%), Positives = 529/607 (87%), Gaps = 10/607 (1%)
 Frame = +1

Query: 1    SLIHAYAVGRDMEEALSCMRKMKDEGVELSLVTYSIIVGGFARVGDVEAAEFWFKEARER 180
            +LIHAYAVGRDMEEALSC+RKMK+EG+E+SLVTYSIIVGGFA++G+ EAA+ WF+EA+ER
Sbjct: 336  NLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKER 395

Query: 181  HETLXXXXXXXXXXXXCQNCRMDRAEALVREMEEEGIDAPIDIYHTMMDGYTMKGDEERC 360
            H TL            CQ   M+RAEALVR+MEEEGIDAPIDIYH MMDGYT+ G+EE+C
Sbjct: 396  HATLNAIIYGNIIYAQCQTRNMERAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKC 455

Query: 361  LVVFERLKECSLTPSVVSYGCLINLYVKGGKVSKALEVSKMMKLAGIKHNMKTYSMLING 540
            L+VFERLKEC  TPS++SYGCLINLY K GKVSKAL+VSK+MK +GIKHNMKTYSMLING
Sbjct: 456  LIVFERLKECGFTPSIISYGCLINLYTKIGKVSKALDVSKVMKSSGIKHNMKTYSMLING 515

Query: 541  FIKLKDWSNAFAIFEDVIKDGLKPDVILYNNIIRAFCGMGNMDRAIRTVEEMKRARYKPT 720
            F+KLKDW+NAFA+FEDV++DGLKPDV+LYNNIIRAFCGMGNMDRAI  V+EM++ R++PT
Sbjct: 516  FLKLKDWANAFAVFEDVMRDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPT 575

Query: 721  TRTFMPIIHGFARAGETRRALDVFDMMRMSGCVPTVHTFNALILGLVEKLQIEKAGEILD 900
            +RTFMPIIHGFARAGE +RAL++F MMR SGC+PTVHTFNALILGLVEK Q+EKA EILD
Sbjct: 576  SRTFMPIIHGFARAGEMKRALEIFHMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILD 635

Query: 901  EMLLADVRPNKHTYTTIMHGYASVGDTGKAFEYFTKLKNEGLELDVYTYEALLKACCKSG 1080
            EM LA + PN+HTYTTIMHGYAS+GDTGKAFEYFTKL+NEGLELDV+TYEALLKACCKSG
Sbjct: 636  EMTLAGISPNEHTYTTIMHGYASLGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSG 695

Query: 1081 RMQSALAVTKEMNKQGIPRNTFVYNILIDGWARRGDIWEAADLMQQMRQEGVQPDIRTYT 1260
            RMQSALAVTKEM+ Q IPRNTFVYNILIDGWARRGD+WEAADLMQQM+QEGVQPD+ TYT
Sbjct: 696  RMQSALAVTKEMSAQKIPRNTFVYNILIDGWARRGDVWEAADLMQQMKQEGVQPDVHTYT 755

Query: 1261 SFINACCKAGDMPRATKTIEEMEAFGVKPNVKTYTTLIHGWARASLPEKALKCFEDMKKA 1440
            SFINAC KAGDM  A K I EME  GVKPNVKTYTTLI GWARASLPEKALKCF DMK  
Sbjct: 756  SFINACSKAGDMQSAAKAIREMEEVGVKPNVKTYTTLIKGWARASLPEKALKCFSDMKLT 815

Query: 1441 GLQPDKAVYHCLMTSLLSRATVAEDYVYTGILHLCGEMVEAGMTVDMGTAVHWSRCLRKI 1620
            GL+PDKAVYHC+MTSLLSRATVAE Y YTG L +  EM+E+G+TVDMGTAVHWSRCLRKI
Sbjct: 816  GLKPDKAVYHCVMTSLLSRATVAESY-YTGALSISREMMESGLTVDMGTAVHWSRCLRKI 874

Query: 1621 ERTGGGITEALQKTFPPDWNSHKTLNAISNTD----VHFDGSDANDY------DDNLLHE 1770
            ERTGG +TEALQKTFPPDW+SH++L+A SN+D     H  G D + Y      DD+  H+
Sbjct: 875  ERTGGELTEALQKTFPPDWSSHQSLDANSNSDTDNEAHVSGDDGDLYFAGGTTDDDDDHD 934

Query: 1771 DSNSDNE 1791
            + N++++
Sbjct: 935  NDNNNDD 941



 Score =  193 bits (490), Expect = 3e-46
 Identities = 109/387 (28%), Positives = 197/387 (50%)
 Frame = +1

Query: 319  MMDGYTMKGDEERCLVVFERLKECSLTPSVVSYGCLINLYVKGGKVSKALEVSKMMKLAG 498
            M++ Y  +GD  R    FE ++   + P++  Y  LI+ Y  G  + +AL   + MK  G
Sbjct: 302  MVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALSCVRKMKEEG 361

Query: 499  IKHNMKTYSMLINGFIKLKDWSNAFAIFEDVIKDGLKPDVILYNNIIRAFCGMGNMDRAI 678
            I+ ++ TYS+++ GF K+ +   A   FE+  +     + I+Y NII A C   NM+RA 
Sbjct: 362  IEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQCQTRNMERAE 421

Query: 679  RTVEEMKRARYKPTTRTFMPIIHGFARAGETRRALDVFDMMRMSGCVPTVHTFNALILGL 858
              V +M+          +  ++ G+   G   + L VF+ ++  G  P++ ++  LI   
Sbjct: 422  ALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFTPSIISYGCLINLY 481

Query: 859  VEKLQIEKAGEILDEMLLADVRPNKHTYTTIMHGYASVGDTGKAFEYFTKLKNEGLELDV 1038
             +  ++ KA ++   M  + ++ N  TY+ +++G+  + D   AF  F  +  +GL+ DV
Sbjct: 482  TKIGKVSKALDVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANAFAVFEDVMRDGLKPDV 541

Query: 1039 YTYEALLKACCKSGRMQSALAVTKEMNKQGIPRNTFVYNILIDGWARRGDIWEAADLMQQ 1218
              Y  +++A C  G M  A+ + KEM K+     +  +  +I G+AR G++  A ++   
Sbjct: 542  VLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEMKRALEIFHM 601

Query: 1219 MRQEGVQPDIRTYTSFINACCKAGDMPRATKTIEEMEAFGVKPNVKTYTTLIHGWARASL 1398
            MR+ G  P + T+ + I    +   M +A + ++EM   G+ PN  TYTT++HG+A    
Sbjct: 602  MRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMTLAGISPNEHTYTTIMHGYASLGD 661

Query: 1399 PEKALKCFEDMKKAGLQPDKAVYHCLM 1479
              KA + F  ++  GL+ D   Y  L+
Sbjct: 662  TGKAFEYFTKLRNEGLELDVFTYEALL 688



 Score =  150 bits (379), Expect = 2e-33
 Identities = 90/357 (25%), Positives = 176/357 (49%)
 Frame = +1

Query: 502  KHNMKTYSMLINGFIKLKDWSNAFAIFEDVIKDGLKPDVILYNNIIRAFCGMGNMDRAIR 681
            K + + + +++N + +  D   A   FE++   G++P + +Y N+I A+    +M+ A+ 
Sbjct: 293  KPSRREFGLMVNYYARRGDMHRARQTFENMRARGIEPTLHVYTNLIHAYAVGRDMEEALS 352

Query: 682  TVEEMKRARYKPTTRTFMPIIHGFARAGETRRALDVFDMMRMSGCVPTVHTFNALILGLV 861
             V +MK    + +  T+  I+ GFA+ G    A   F+  +          +  +I    
Sbjct: 353  CVRKMKEEGIEMSLVTYSIIVGGFAKMGNAEAADHWFEEAKERHATLNAIIYGNIIYAQC 412

Query: 862  EKLQIEKAGEILDEMLLADVRPNKHTYTTIMHGYASVGDTGKAFEYFTKLKNEGLELDVY 1041
            +   +E+A  ++ +M    +      Y  +M GY  +G+  K    F +LK  G    + 
Sbjct: 413  QTRNMERAEALVRDMEEEGIDAPIDIYHMMMDGYTIIGNEEKCLIVFERLKECGFTPSII 472

Query: 1042 TYEALLKACCKSGRMQSALAVTKEMNKQGIPRNTFVYNILIDGWARRGDIWEAADLMQQM 1221
            +Y  L+    K G++  AL V+K M   GI  N   Y++LI+G+ +  D   A  + + +
Sbjct: 473  SYGCLINLYTKIGKVSKALDVSKVMKSSGIKHNMKTYSMLINGFLKLKDWANAFAVFEDV 532

Query: 1222 RQEGVQPDIRTYTSFINACCKAGDMPRATKTIEEMEAFGVKPNVKTYTTLIHGWARASLP 1401
             ++G++PD+  Y + I A C  G+M RA   ++EM+    +P  +T+  +IHG+ARA   
Sbjct: 533  MRDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQKERHRPTSRTFMPIIHGFARAGEM 592

Query: 1402 EKALKCFEDMKKAGLQPDKAVYHCLMTSLLSRATVAEDYVYTGILHLCGEMVEAGMT 1572
            ++AL+ F  M+++G  P    ++ L+  L+ +  + +       + +  EM  AG++
Sbjct: 593  KRALEIFHMMRRSGCIPTVHTFNALILGLVEKRQMEK------AIEILDEMTLAGIS 643


>ref|XP_004236808.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
            chloroplastic-like [Solanum lycopersicum]
          Length = 877

 Score =  945 bits (2442), Expect = 0.0
 Identities = 452/591 (76%), Positives = 523/591 (88%), Gaps = 1/591 (0%)
 Frame = +1

Query: 1    SLIHAYAVGRDMEEALSCMRKMKDEGVELSLVTYSIIVGGFARVGDVEAAEFWFKEARER 180
            +L+HAYAVGRDMEEAL C+RKMKDEG+ELSLVTYSI++GGFA+VG++EAAE WF+EA++R
Sbjct: 283  NLVHAYAVGRDMEEALCCVRKMKDEGIELSLVTYSILIGGFAKVGNIEAAERWFEEAKKR 342

Query: 181  HETLXXXXXXXXXXXXCQNCRMDRAEALVREMEEEGIDAPIDIYHTMMDGYTMKGDEERC 360
              TL            CQ   MDRAE LVREMEEEG+DAPIDIYHTMMDGYTM G+EE+C
Sbjct: 343  DLTLNAIIYGNIIYANCQTFHMDRAEELVREMEEEGVDAPIDIYHTMMDGYTMIGNEEKC 402

Query: 361  LVVFERLKECSLTPSVVSYGCLINLYVKGGKVSKALEVSKMMKLAGIKHNMKTYSMLING 540
            L+VF+RLKEC  TPSVVSYGCL+NLY+K GKVSKALEVS+MMKLAGIKHNMKTYS+L+NG
Sbjct: 403  LIVFDRLKECGFTPSVVSYGCLMNLYIKIGKVSKALEVSEMMKLAGIKHNMKTYSILMNG 462

Query: 541  FIKLKDWSNAFAIFEDVIKDGLKPDVILYNNIIRAFCGMGNMDRAIRTVEEMKRARYKPT 720
            FI LKDW+NAFAIFEDVI+DGLKPDV+LYNNIIRAFCGMGN+DRA+R VEEMK+ R+ P 
Sbjct: 463  FINLKDWANAFAIFEDVIRDGLKPDVVLYNNIIRAFCGMGNLDRALRIVEEMKKERHVPN 522

Query: 721  TRTFMPIIHGFARAGETRRALDVFDMMRMSGCVPTVHTFNALILGLVEKLQIEKAGEILD 900
            +RTFMPIIH FA+AGE RRALDVFDMMR SGC+P+VHTFNAL+LGLVEK Q+EKA +ILD
Sbjct: 523  SRTFMPIIHAFAKAGEVRRALDVFDMMRRSGCIPSVHTFNALVLGLVEKRQMEKAVQILD 582

Query: 901  EMLLADVRPNKHTYTTIMHGYASVGDTGKAFEYFTKLKNEGLELDVYTYEALLKACCKSG 1080
            +MLLA V PN++TYTTIMHGYAS+GD  KA EYF+K+KNEGLELD+YTYEALLKACCKSG
Sbjct: 583  DMLLAGVGPNEYTYTTIMHGYASLGDIEKACEYFSKIKNEGLELDIYTYEALLKACCKSG 642

Query: 1081 RMQSALAVTKEMNKQGIPRNTFVYNILIDGWARRGDIWEAADLMQQMRQEGVQPDIRTYT 1260
            RMQSAL VTKEM+ + IPRNTFVYNILIDGWARRGD+WEAADLMQQMRQEGV PDI T+T
Sbjct: 643  RMQSALTVTKEMSAKSIPRNTFVYNILIDGWARRGDVWEAADLMQQMRQEGVPPDIHTFT 702

Query: 1261 SFINACCKAGDMPRATKTIEEMEAFGVKPNVKTYTTLIHGWARASLPEKALKCFEDMKKA 1440
            SFINACCKAG+M RA K +EEME  G+KPN+KTYTTLIHGWARASLPEK LKCFE MK++
Sbjct: 703  SFINACCKAGEMQRAMKAVEEMETVGIKPNLKTYTTLIHGWARASLPEKGLKCFEQMKQS 762

Query: 1441 GLQPDKAVYHCLMTSLLSRATVA-EDYVYTGILHLCGEMVEAGMTVDMGTAVHWSRCLRK 1617
            GL+PDKAVYHCLMTSLLSRA VA +DY+ T I H+C EMVE+G+TVDMGTAVHWS+CLRK
Sbjct: 763  GLKPDKAVYHCLMTSLLSRAAVADQDYIITRIQHVCEEMVESGLTVDMGTAVHWSKCLRK 822

Query: 1618 IERTGGGITEALQKTFPPDWNSHKTLNAISNTDVHFDGSDANDYDDNLLHE 1770
            IERTGG IT++LQKTFPPDW+SH+TLN  SN +   +GSD++D + +  +E
Sbjct: 823  IERTGGDITKSLQKTFPPDWSSHRTLNGTSNDNEIEEGSDSSDDERSSFYE 873



 Score =  185 bits (469), Expect = 9e-44
 Identities = 116/405 (28%), Positives = 197/405 (48%), Gaps = 35/405 (8%)
 Frame = +1

Query: 370  FERLKECSLTPSVVSYGCLINLYVKGGKVSKALEV------------------------- 474
            FER+K+    PS   +G ++N Y + G + +A E                          
Sbjct: 235  FERIKK----PSRKEFGLMVNYYARRGDMHRARETFEKMCARGIEPTSHVYTNLVHAYAV 290

Query: 475  ----------SKMMKLAGIKHNMKTYSMLINGFIKLKDWSNAFAIFEDVIKDGLKPDVIL 624
                       + MK  GI+ ++ TYS+LI GF K+ +   A   FE+  K  L  + I+
Sbjct: 291  GRDMEEALCCVRKMKDEGIELSLVTYSILIGGFAKVGNIEAAERWFEEAKKRDLTLNAII 350

Query: 625  YNNIIRAFCGMGNMDRAIRTVEEMKRARYKPTTRTFMPIIHGFARAGETRRALDVFDMMR 804
            Y NII A C   +MDRA   V EM+          +  ++ G+   G   + L VFD ++
Sbjct: 351  YGNIIYANCQTFHMDRAEELVREMEEEGVDAPIDIYHTMMDGYTMIGNEEKCLIVFDRLK 410

Query: 805  MSGCVPTVHTFNALILGLVEKLQIEKAGEILDEMLLADVRPNKHTYTTIMHGYASVGDTG 984
              G  P+V ++  L+   ++  ++ KA E+ + M LA ++ N  TY+ +M+G+ ++ D  
Sbjct: 411  ECGFTPSVVSYGCLMNLYIKIGKVSKALEVSEMMKLAGIKHNMKTYSILMNGFINLKDWA 470

Query: 985  KAFEYFTKLKNEGLELDVYTYEALLKACCKSGRMQSALAVTKEMNKQGIPRNTFVYNILI 1164
             AF  F  +  +GL+ DV  Y  +++A C  G +  AL + +EM K+    N+  +  +I
Sbjct: 471  NAFAIFEDVIRDGLKPDVVLYNNIIRAFCGMGNLDRALRIVEEMKKERHVPNSRTFMPII 530

Query: 1165 DGWARRGDIWEAADLMQQMRQEGVQPDIRTYTSFINACCKAGDMPRATKTIEEMEAFGVK 1344
              +A+ G++  A D+   MR+ G  P + T+ + +    +   M +A + +++M   GV 
Sbjct: 531  HAFAKAGEVRRALDVFDMMRRSGCIPSVHTFNALVLGLVEKRQMEKAVQILDDMLLAGVG 590

Query: 1345 PNVKTYTTLIHGWARASLPEKALKCFEDMKKAGLQPDKAVYHCLM 1479
            PN  TYTT++HG+A     EKA + F  +K  GL+ D   Y  L+
Sbjct: 591  PNEYTYTTIMHGYASLGDIEKACEYFSKIKNEGLELDIYTYEALL 635



 Score =  150 bits (379), Expect = 2e-33
 Identities = 93/362 (25%), Positives = 173/362 (47%), Gaps = 16/362 (4%)
 Frame = +1

Query: 502  KHNMKTYSMLINGFIKLKDWSNAFAIFEDVIKDGLKPDVILYNNIIRAFCGMGNMDRAIR 681
            K + K + +++N + +  D   A   FE +   G++P   +Y N++ A+    +M+ A+ 
Sbjct: 240  KPSRKEFGLMVNYYARRGDMHRARETFEKMCARGIEPTSHVYTNLVHAYAVGRDMEEALC 299

Query: 682  TVEEMKRARYKPTTRTFMPIIHGFARAGETRRALDVFDMMRMSGCVPTVHTFNALILGLV 861
             V +MK    + +  T+  +I GFA+ G    A   F+  +          +  +I    
Sbjct: 300  CVRKMKDEGIELSLVTYSILIGGFAKVGNIEAAERWFEEAKKRDLTLNAIIYGNIIYANC 359

Query: 862  EKLQIEKAGEILDEMLLADVRPNKHTYTTIMHGYASVGDTGKAFEYFTKLKNEGLELDVY 1041
            +   +++A E++ EM    V      Y T+M GY  +G+  K    F +LK  G    V 
Sbjct: 360  QTFHMDRAEELVREMEEEGVDAPIDIYHTMMDGYTMIGNEEKCLIVFDRLKECGFTPSVV 419

Query: 1042 TYEALLKACCKSGRMQSALAVTKEMNKQGIPRNTFVYNILIDGWARRGDIWEAADLMQQM 1221
            +Y  L+    K G++  AL V++ M   GI  N   Y+IL++G+    D   A  + + +
Sbjct: 420  SYGCLMNLYIKIGKVSKALEVSEMMKLAGIKHNMKTYSILMNGFINLKDWANAFAIFEDV 479

Query: 1222 RQEGVQPDIRTYTSFINACCKAGDMPRATKTIEEMEAFGVKPNVKTYTTLIHGWARASLP 1401
             ++G++PD+  Y + I A C  G++ RA + +EEM+     PN +T+  +IH +A+A   
Sbjct: 480  IRDGLKPDVVLYNNIIRAFCGMGNLDRALRIVEEMKKERHVPNSRTFMPIIHAFAKAGEV 539

Query: 1402 EKALKCFEDMKKAGLQPDKAVYHCLMTSLLSRATVAE----------------DYVYTGI 1533
             +AL  F+ M+++G  P    ++ L+  L+ +  + +                +Y YT I
Sbjct: 540  RRALDVFDMMRRSGCIPSVHTFNALVLGLVEKRQMEKAVQILDDMLLAGVGPNEYTYTTI 599

Query: 1534 LH 1539
            +H
Sbjct: 600  MH 601



 Score = 95.9 bits (237), Expect = 7e-17
 Identities = 58/209 (27%), Positives = 102/209 (48%)
 Frame = +1

Query: 922  RPNKHTYTTIMHGYASVGDTGKAFEYFTKLKNEGLELDVYTYEALLKACCKSGRMQSALA 1101
            +P++  +  +++ YA  GD  +A E F K+   G+E   + Y  L+ A      M+ AL 
Sbjct: 240  KPSRKEFGLMVNYYARRGDMHRARETFEKMCARGIEPTSHVYTNLVHAYAVGRDMEEALC 299

Query: 1102 VTKEMNKQGIPRNTFVYNILIDGWARRGDIWEAADLMQQMRQEGVQPDIRTYTSFINACC 1281
              ++M  +GI  +   Y+ILI G+A+ G+I  A    ++ ++  +  +   Y + I A C
Sbjct: 300  CVRKMKDEGIELSLVTYSILIGGFAKVGNIEAAERWFEEAKKRDLTLNAIIYGNIIYANC 359

Query: 1282 KAGDMPRATKTIEEMEAFGVKPNVKTYTTLIHGWARASLPEKALKCFEDMKKAGLQPDKA 1461
            +   M RA + + EME  GV   +  Y T++ G+      EK L  F+ +K+ G  P   
Sbjct: 360  QTFHMDRAEELVREMEEEGVDAPIDIYHTMMDGYTMIGNEEKCLIVFDRLKECGFTPSVV 419

Query: 1462 VYHCLMTSLLSRATVAEDYVYTGILHLCG 1548
             Y CLM   +    V++    + ++ L G
Sbjct: 420  SYGCLMNLYIKIGKVSKALEVSEMMKLAG 448


>ref|XP_004135367.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
            chloroplastic-like [Cucumis sativus]
          Length = 962

 Score =  941 bits (2432), Expect = 0.0
 Identities = 455/605 (75%), Positives = 524/605 (86%), Gaps = 4/605 (0%)
 Frame = +1

Query: 1    SLIHAYAVGRDMEEALSCMRKMKDEGVELSLVTYSIIVGGFARVGDVEAAEFWFKEARER 180
            +LIHAYAVGRDMEEALSC+RKMK+EG+E+SLVTYSI+V GFA+ G+ E+A+ WF+EA+E+
Sbjct: 351  NLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSILVSGFAKTGNAESADHWFQEAKEK 410

Query: 181  HETLXXXXXXXXXXXXCQNCRMDRAEALVREMEEEGIDAPIDIYHTMMDGYTMKGDEERC 360
            H +L            CQ C MD+AEALVREMEEEGIDAPIDIYHTMMDGYTM GDE++C
Sbjct: 411  HSSLNAIIYGNIIYAYCQRCNMDKAEALVREMEEEGIDAPIDIYHTMMDGYTMVGDEDKC 470

Query: 361  LVVFERLKECSLTPSVVSYGCLINLYVKGGKVSKALEVSKMMKLAGIKHNMKTYSMLING 540
            L+VFER KEC L PSV++YGCLINLY K GKVSKALEVSK M+ AGIKHNMKTYSMLING
Sbjct: 471  LLVFERFKECGLNPSVITYGCLINLYAKLGKVSKALEVSKEMEHAGIKHNMKTYSMLING 530

Query: 541  FIKLKDWSNAFAIFEDVIKDGLKPDVILYNNIIRAFCGMGNMDRAIRTVEEMKRARYKPT 720
            F+KLKDW+NAFAIFED+IKDG+KPDV+LYNNII AFCGMG MDRA+ TV+EM++ R+KPT
Sbjct: 531  FLKLKDWANAFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPT 590

Query: 721  TRTFMPIIHGFARAGETRRALDVFDMMRMSGCVPTVHTFNALILGLVEKLQIEKAGEILD 900
            TRTFMPIIHGFAR GE ++ALDVFDMMRMSGC+PTVHT+NALILGLVEK ++EKA +ILD
Sbjct: 591  TRTFMPIIHGFARKGEMKKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAEQILD 650

Query: 901  EMLLADVRPNKHTYTTIMHGYASVGDTGKAFEYFTKLKNEGLELDVYTYEALLKACCKSG 1080
            EM LA V PN+HTYTTIMHGYAS+GDTGKAF YFTKL++EGL+LDVYTYEALLKACCKSG
Sbjct: 651  EMTLAGVSPNEHTYTTIMHGYASLGDTGKAFTYFTKLRDEGLQLDVYTYEALLKACCKSG 710

Query: 1081 RMQSALAVTKEMNKQGIPRNTFVYNILIDGWARRGDIWEAADLMQQMRQEGVQPDIRTYT 1260
            RMQSALAVTKEM+ Q IPRNTF+YNILIDGWARRGDIWEAADLMQQM++EGVQPDI TYT
Sbjct: 711  RMQSALAVTKEMSAQNIPRNTFIYNILIDGWARRGDIWEAADLMQQMKREGVQPDIHTYT 770

Query: 1261 SFINACCKAGDMPRATKTIEEMEAFGVKPNVKTYTTLIHGWARASLPEKALKCFEDMKKA 1440
            SFINAC KAGDM RATKTIEEM++ GVKPNVKTYTTLI+GWARASLPEKAL CFE+MK +
Sbjct: 771  SFINACSKAGDMQRATKTIEEMKSVGVKPNVKTYTTLINGWARASLPEKALSCFEEMKLS 830

Query: 1441 GLQPDKAVYHCLMTSLLSRATVAEDYVYTGILHLCGEMVEAGMTVDMGTAVHWSRCLRKI 1620
            GL+PD+AVYHCLMTSLLSRATVA   +Y GIL +C EMV+  +TVDMGTAVHWS+CL KI
Sbjct: 831  GLKPDRAVYHCLMTSLLSRATVAHGCIYPGILSVCREMVDCELTVDMGTAVHWSKCLLKI 890

Query: 1621 ERTGGGITEALQKTFPPDWNSHKTLNAISNTDVHFDGSDANDYDDNLLHEDSNS----DN 1788
            ERTGG ITEALQKTFPP+WN +      SN D   +   ++D DD++  E ++S    D 
Sbjct: 891  ERTGGEITEALQKTFPPNWNVYNNTLTNSNIDSDDESDISDDEDDDICQEGASSNAGDDG 950

Query: 1789 ETDFD 1803
            E+D D
Sbjct: 951  ESDGD 955



 Score =  213 bits (541), Expect = 4e-52
 Identities = 124/390 (31%), Positives = 201/390 (51%)
 Frame = +1

Query: 310  YHTMMDGYTMKGDEERCLVVFERLKECSLTPSVVSYGCLINLYVKGGKVSKALEVSKMMK 489
            Y  M++ YT +GD  R    FE+++   + PS   Y  LI+ Y  G  + +AL   + MK
Sbjct: 314  YGLMVNYYTRRGDMHRARETFEKMRARGIEPSSHVYTNLIHAYAVGRDMEEALSCVRKMK 373

Query: 490  LAGIKHNMKTYSMLINGFIKLKDWSNAFAIFEDVIKDGLKPDVILYNNIIRAFCGMGNMD 669
              GI+ ++ TYS+L++GF K  +  +A   F++  +     + I+Y NII A+C   NMD
Sbjct: 374  EEGIEMSLVTYSILVSGFAKTGNAESADHWFQEAKEKHSSLNAIIYGNIIYAYCQRCNMD 433

Query: 670  RAIRTVEEMKRARYKPTTRTFMPIIHGFARAGETRRALDVFDMMRMSGCVPTVHTFNALI 849
            +A   V EM+          +  ++ G+   G+  + L VF+  +  G  P+V T+  LI
Sbjct: 434  KAEALVREMEEEGIDAPIDIYHTMMDGYTMVGDEDKCLLVFERFKECGLNPSVITYGCLI 493

Query: 850  LGLVEKLQIEKAGEILDEMLLADVRPNKHTYTTIMHGYASVGDTGKAFEYFTKLKNEGLE 1029
                +  ++ KA E+  EM  A ++ N  TY+ +++G+  + D   AF  F  L  +G++
Sbjct: 494  NLYAKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDLIKDGIK 553

Query: 1030 LDVYTYEALLKACCKSGRMQSALAVTKEMNKQGIPRNTFVYNILIDGWARRGDIWEAADL 1209
             DV  Y  ++ A C  G+M  A+   KEM KQ     T  +  +I G+AR+G++ +A D+
Sbjct: 554  PDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTRTFMPIIHGFARKGEMKKALDV 613

Query: 1210 MQQMRQEGVQPDIRTYTSFINACCKAGDMPRATKTIEEMEAFGVKPNVKTYTTLIHGWAR 1389
               MR  G  P + TY + I    +   M +A + ++EM   GV PN  TYTT++HG+A 
Sbjct: 614  FDMMRMSGCIPTVHTYNALILGLVEKRKMEKAEQILDEMTLAGVSPNEHTYTTIMHGYAS 673

Query: 1390 ASLPEKALKCFEDMKKAGLQPDKAVYHCLM 1479
                 KA   F  ++  GLQ D   Y  L+
Sbjct: 674  LGDTGKAFTYFTKLRDEGLQLDVYTYEALL 703


>ref|XP_002515794.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223545122|gb|EEF46633.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 924

 Score =  939 bits (2428), Expect = 0.0
 Identities = 453/567 (79%), Positives = 507/567 (89%)
 Frame = +1

Query: 1    SLIHAYAVGRDMEEALSCMRKMKDEGVELSLVTYSIIVGGFARVGDVEAAEFWFKEARER 180
            SLIHAYAVGRDMEEALSC RKMK+EGVE+SLVTYSIIVGGFA++G+ +AA+ WFKEA++R
Sbjct: 346  SLIHAYAVGRDMEEALSCARKMKEEGVEMSLVTYSIIVGGFAKIGNADAADRWFKEAKDR 405

Query: 181  HETLXXXXXXXXXXXXCQNCRMDRAEALVREMEEEGIDAPIDIYHTMMDGYTMKGDEERC 360
            H  +            CQ C MD+AEALVREME EGIDAPIDIYHTMMDGYTM G+EE+C
Sbjct: 406  HSHMNAIIYGNMIYAYCQTCNMDQAEALVREMEGEGIDAPIDIYHTMMDGYTMVGNEEKC 465

Query: 361  LVVFERLKECSLTPSVVSYGCLINLYVKGGKVSKALEVSKMMKLAGIKHNMKTYSMLING 540
            L VFERLKEC   PSVVSYGCLINLY K GK+SKALEVSKMM+ AGIKHNMKTYSMLING
Sbjct: 466  LTVFERLKECGFAPSVVSYGCLINLYAKVGKISKALEVSKMMESAGIKHNMKTYSMLING 525

Query: 541  FIKLKDWSNAFAIFEDVIKDGLKPDVILYNNIIRAFCGMGNMDRAIRTVEEMKRARYKPT 720
            F+KLKDW+NAFAIFEDV+KDGLKPDV+LYNNIIRAFCGMG MDRAI  V+EM++ R++PT
Sbjct: 526  FLKLKDWANAFAIFEDVVKDGLKPDVVLYNNIIRAFCGMGTMDRAICMVKEMQKERHRPT 585

Query: 721  TRTFMPIIHGFARAGETRRALDVFDMMRMSGCVPTVHTFNALILGLVEKLQIEKAGEILD 900
            +RTFMPIIHGFARAGE +RALDVFDMMR SGC+PTVHTFNALILGLVEK Q+EKA EILD
Sbjct: 586  SRTFMPIIHGFARAGEMKRALDVFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILD 645

Query: 901  EMLLADVRPNKHTYTTIMHGYASVGDTGKAFEYFTKLKNEGLELDVYTYEALLKACCKSG 1080
            EM LA V PN+HTYTTIMHGYA++GDTGKAFEYFTKL++EGL+LDVYTYEALLKACCKSG
Sbjct: 646  EMALAGVSPNEHTYTTIMHGYAALGDTGKAFEYFTKLRDEGLQLDVYTYEALLKACCKSG 705

Query: 1081 RMQSALAVTKEMNKQGIPRNTFVYNILIDGWARRGDIWEAADLMQQMRQEGVQPDIRTYT 1260
            RMQSALAVTKEM+ Q IPRNTFVYNILIDGWARRGD+WEAADLMQQM+Q GV+PDI TYT
Sbjct: 706  RMQSALAVTKEMSAQNIPRNTFVYNILIDGWARRGDVWEAADLMQQMKQGGVKPDIHTYT 765

Query: 1261 SFINACCKAGDMPRATKTIEEMEAFGVKPNVKTYTTLIHGWARASLPEKALKCFEDMKKA 1440
            SFINACCKAGDM RA+K +EEME  GVKPNVKTYTTLIHGWARASLPEKAL+CF++MK A
Sbjct: 766  SFINACCKAGDMLRASKMMEEMETSGVKPNVKTYTTLIHGWARASLPEKALRCFQEMKLA 825

Query: 1441 GLQPDKAVYHCLMTSLLSRATVAEDYVYTGILHLCGEMVEAGMTVDMGTAVHWSRCLRKI 1620
            GL+PDKAVYHCLMT+LLSRATV E YV  GIL +C EM+E+G+ VDMGTAVHWS+ LRKI
Sbjct: 826  GLKPDKAVYHCLMTALLSRATVTEAYVRPGILSICKEMIESGLIVDMGTAVHWSKSLRKI 885

Query: 1621 ERTGGGITEALQKTFPPDWNSHKTLNA 1701
            ERTGG +TEALQKTFPPDWN   +++A
Sbjct: 886  ERTGGELTEALQKTFPPDWNMRHSVDA 912



 Score =  200 bits (509), Expect = 2e-48
 Identities = 115/390 (29%), Positives = 197/390 (50%)
 Frame = +1

Query: 310  YHTMMDGYTMKGDEERCLVVFERLKECSLTPSVVSYGCLINLYVKGGKVSKALEVSKMMK 489
            Y  M+  Y  +GD  R    FE ++   + P+   Y  LI+ Y  G  + +AL  ++ MK
Sbjct: 309  YGLMVSYYARRGDMHRARQTFESMRARGIEPTSHVYTSLIHAYAVGRDMEEALSCARKMK 368

Query: 490  LAGIKHNMKTYSMLINGFIKLKDWSNAFAIFEDVIKDGLKPDVILYNNIIRAFCGMGNMD 669
              G++ ++ TYS+++ GF K+ +   A   F++        + I+Y N+I A+C   NMD
Sbjct: 369  EEGVEMSLVTYSIIVGGFAKIGNADAADRWFKEAKDRHSHMNAIIYGNMIYAYCQTCNMD 428

Query: 670  RAIRTVEEMKRARYKPTTRTFMPIIHGFARAGETRRALDVFDMMRMSGCVPTVHTFNALI 849
            +A   V EM+          +  ++ G+   G   + L VF+ ++  G  P+V ++  LI
Sbjct: 429  QAEALVREMEGEGIDAPIDIYHTMMDGYTMVGNEEKCLTVFERLKECGFAPSVVSYGCLI 488

Query: 850  LGLVEKLQIEKAGEILDEMLLADVRPNKHTYTTIMHGYASVGDTGKAFEYFTKLKNEGLE 1029
                +  +I KA E+   M  A ++ N  TY+ +++G+  + D   AF  F  +  +GL+
Sbjct: 489  NLYAKVGKISKALEVSKMMESAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDVVKDGLK 548

Query: 1030 LDVYTYEALLKACCKSGRMQSALAVTKEMNKQGIPRNTFVYNILIDGWARRGDIWEAADL 1209
             DV  Y  +++A C  G M  A+ + KEM K+     +  +  +I G+AR G++  A D+
Sbjct: 549  PDVVLYNNIIRAFCGMGTMDRAICMVKEMQKERHRPTSRTFMPIIHGFARAGEMKRALDV 608

Query: 1210 MQQMRQEGVQPDIRTYTSFINACCKAGDMPRATKTIEEMEAFGVKPNVKTYTTLIHGWAR 1389
               MR+ G  P + T+ + I    +   M +A + ++EM   GV PN  TYTT++HG+A 
Sbjct: 609  FDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMALAGVSPNEHTYTTIMHGYAA 668

Query: 1390 ASLPEKALKCFEDMKKAGLQPDKAVYHCLM 1479
                 KA + F  ++  GLQ D   Y  L+
Sbjct: 669  LGDTGKAFEYFTKLRDEGLQLDVYTYEALL 698



 Score =  134 bits (336), Expect = 2e-28
 Identities = 94/375 (25%), Positives = 170/375 (45%), Gaps = 35/375 (9%)
 Frame = +1

Query: 553  KDWSNAFAIFEDVIKDGLKPDVILYNNIIRAFCGMGNMDRAIRTVEEMKRARYKPTTRTF 732
            ++W +  + FE +     KP    Y  ++  +   G+M RA +T E M+    +PT+  +
Sbjct: 289  ENWQDVVSAFERI----KKPSRREYGLMVSYYARRGDMHRARQTFESMRARGIEPTSHVY 344

Query: 733  MPIIHGFARAGETRRALDVFDMMRMSGCVPTVHTF------------------------- 837
              +IH +A   +   AL     M+  G   ++ T+                         
Sbjct: 345  TSLIHAYAVGRDMEEALSCARKMKEEGVEMSLVTYSIIVGGFAKIGNADAADRWFKEAKD 404

Query: 838  -----NALILG-----LVEKLQIEKAGEILDEMLLADVRPNKHTYTTIMHGYASVGDTGK 987
                 NA+I G       +   +++A  ++ EM    +      Y T+M GY  VG+  K
Sbjct: 405  RHSHMNAIIYGNMIYAYCQTCNMDQAEALVREMEGEGIDAPIDIYHTMMDGYTMVGNEEK 464

Query: 988  AFEYFTKLKNEGLELDVYTYEALLKACCKSGRMQSALAVTKEMNKQGIPRNTFVYNILID 1167
                F +LK  G    V +Y  L+    K G++  AL V+K M   GI  N   Y++LI+
Sbjct: 465  CLTVFERLKECGFAPSVVSYGCLINLYAKVGKISKALEVSKMMESAGIKHNMKTYSMLIN 524

Query: 1168 GWARRGDIWEAADLMQQMRQEGVQPDIRTYTSFINACCKAGDMPRATKTIEEMEAFGVKP 1347
            G+ +  D   A  + + + ++G++PD+  Y + I A C  G M RA   ++EM+    +P
Sbjct: 525  GFLKLKDWANAFAIFEDVVKDGLKPDVVLYNNIIRAFCGMGTMDRAICMVKEMQKERHRP 584

Query: 1348 NVKTYTTLIHGWARASLPEKALKCFEDMKKAGLQPDKAVYHCLMTSLLSRATVAEDYVYT 1527
              +T+  +IHG+ARA   ++AL  F+ M+++G  P    ++ L+  L+ +  + +     
Sbjct: 585  TSRTFMPIIHGFARAGEMKRALDVFDMMRRSGCIPTVHTFNALILGLVEKRQMEK----- 639

Query: 1528 GILHLCGEMVEAGMT 1572
              + +  EM  AG++
Sbjct: 640  -AIEILDEMALAGVS 653


>ref|XP_006367148.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
            chloroplastic-like isoform X4 [Solanum tuberosum]
          Length = 592

 Score =  935 bits (2416), Expect = 0.0
 Identities = 447/584 (76%), Positives = 515/584 (88%), Gaps = 1/584 (0%)
 Frame = +1

Query: 22   VGRDMEEALSCMRKMKDEGVELSLVTYSIIVGGFARVGDVEAAEFWFKEARERHETLXXX 201
            +GRDMEEAL C+RKMKDEG+ELSLVTYSI++GGFA+VG++EAAE WF+EA++R  TL   
Sbjct: 5    MGRDMEEALCCVRKMKDEGIELSLVTYSILIGGFAKVGNIEAAERWFEEAKKRDLTLNAI 64

Query: 202  XXXXXXXXXCQNCRMDRAEALVREMEEEGIDAPIDIYHTMMDGYTMKGDEERCLVVFERL 381
                     CQ   MDRAE LVREMEEE IDAPIDIYHTMMDGYTM G+EE+CL+VF+RL
Sbjct: 65   IYGNIIYANCQTFNMDRAEELVREMEEEDIDAPIDIYHTMMDGYTMIGNEEKCLIVFDRL 124

Query: 382  KECSLTPSVVSYGCLINLYVKGGKVSKALEVSKMMKLAGIKHNMKTYSMLINGFIKLKDW 561
            KEC  TPSVVSYGCL+NLY+K GKVSKA EVS+MMKLAGIKHNMKTYS+L+NGFI LKDW
Sbjct: 125  KECGFTPSVVSYGCLMNLYIKIGKVSKAFEVSEMMKLAGIKHNMKTYSILMNGFINLKDW 184

Query: 562  SNAFAIFEDVIKDGLKPDVILYNNIIRAFCGMGNMDRAIRTVEEMKRARYKPTTRTFMPI 741
            +NAFAIFEDVI+DGLKPDV+LYNNIIRAFCGMGN+DRA+R VEEMK+ R+ P +RTFMPI
Sbjct: 185  ANAFAIFEDVIRDGLKPDVVLYNNIIRAFCGMGNLDRALRIVEEMKKERHMPNSRTFMPI 244

Query: 742  IHGFARAGETRRALDVFDMMRMSGCVPTVHTFNALILGLVEKLQIEKAGEILDEMLLADV 921
            IH FA+AGE RRALDVFDMMR SGC+P+VHTFNAL+LGLVEK Q+EKA +ILD+MLLA V
Sbjct: 245  IHAFAKAGEVRRALDVFDMMRRSGCIPSVHTFNALVLGLVEKRQMEKAVQILDDMLLAGV 304

Query: 922  RPNKHTYTTIMHGYASVGDTGKAFEYFTKLKNEGLELDVYTYEALLKACCKSGRMQSALA 1101
             PN++TYTTIMHGYAS+GD GKA EYF+K+KNEGLELD+YTYEALLKACCKSGRMQSAL 
Sbjct: 305  SPNEYTYTTIMHGYASLGDIGKACEYFSKVKNEGLELDIYTYEALLKACCKSGRMQSALM 364

Query: 1102 VTKEMNKQGIPRNTFVYNILIDGWARRGDIWEAADLMQQMRQEGVQPDIRTYTSFINACC 1281
            VTKEM+ + IPRNTFVYNILIDGWARRGD+WEAADLMQQMRQEGV PDI T+TSFINACC
Sbjct: 365  VTKEMSAKSIPRNTFVYNILIDGWARRGDVWEAADLMQQMRQEGVPPDIHTFTSFINACC 424

Query: 1282 KAGDMPRATKTIEEMEAFGVKPNVKTYTTLIHGWARASLPEKALKCFEDMKKAGLQPDKA 1461
            KAGDM RA + +EEME  G+KPN+KTYTTLIHGWARASLPEK LKCFE MK++GL+PDKA
Sbjct: 425  KAGDMQRAMRAVEEMETVGIKPNLKTYTTLIHGWARASLPEKGLKCFEQMKQSGLKPDKA 484

Query: 1462 VYHCLMTSLLSRATVA-EDYVYTGILHLCGEMVEAGMTVDMGTAVHWSRCLRKIERTGGG 1638
            VYHCLMTSLLSRA  A +DY+ TGI H+C EMVE+G+TVDMGTAVHWS+CLRKIERTGG 
Sbjct: 485  VYHCLMTSLLSRAAFADQDYIITGIQHVCEEMVESGLTVDMGTAVHWSKCLRKIERTGGD 544

Query: 1639 ITEALQKTFPPDWNSHKTLNAISNTDVHFDGSDANDYDDNLLHE 1770
            IT++LQKTFPPDW SH+TLNA SN + + +GSD+ D + +  +E
Sbjct: 545  ITKSLQKTFPPDWGSHRTLNATSNDNENEEGSDSGDDERSSFYE 588



 Score =  155 bits (392), Expect = 7e-35
 Identities = 95/352 (26%), Positives = 166/352 (47%)
 Frame = +1

Query: 4    LIHAYAVGRDMEEALSCMRKMKDEGVELSLVTYSIIVGGFARVGDVEAAEFWFKEARERH 183
            L++ Y     + +A      MK  G++ ++ TYSI++ GF  + D   A   F++     
Sbjct: 139  LMNLYIKIGKVSKAFEVSEMMKLAGIKHNMKTYSILMNGFINLKDWANAFAIFEDVIRDG 198

Query: 184  ETLXXXXXXXXXXXXCQNCRMDRAEALVREMEEEGIDAPIDIYHTMMDGYTMKGDEERCL 363
                           C    +DRA  +V EM++E        +  ++  +   G+  R L
Sbjct: 199  LKPDVVLYNNIIRAFCGMGNLDRALRIVEEMKKERHMPNSRTFMPIIHAFAKAGEVRRAL 258

Query: 364  VVFERLKECSLTPSVVSYGCLINLYVKGGKVSKALEVSKMMKLAGIKHNMKTYSMLINGF 543
             VF+ ++     PSV ++  L+   V+  ++ KA+++   M LAG+  N  TY+ +++G+
Sbjct: 259  DVFDMMRRSGCIPSVHTFNALVLGLVEKRQMEKAVQILDDMLLAGVSPNEYTYTTIMHGY 318

Query: 544  IKLKDWSNAFAIFEDVIKDGLKPDVILYNNIIRAFCGMGNMDRAIRTVEEMKRARYKPTT 723
              L D   A   F  V  +GL+ D+  Y  +++A C  G M  A+   +EM        T
Sbjct: 319  ASLGDIGKACEYFSKVKNEGLELDIYTYEALLKACCKSGRMQSALMVTKEMSAKSIPRNT 378

Query: 724  RTFMPIIHGFARAGETRRALDVFDMMRMSGCVPTVHTFNALILGLVEKLQIEKAGEILDE 903
              +  +I G+AR G+   A D+   MR  G  P +HTF + I    +   +++A   ++E
Sbjct: 379  FVYNILIDGWARRGDVWEAADLMQQMRQEGVPPDIHTFTSFINACCKAGDMQRAMRAVEE 438

Query: 904  MLLADVRPNKHTYTTIMHGYASVGDTGKAFEYFTKLKNEGLELDVYTYEALL 1059
            M    ++PN  TYTT++HG+A      K  + F ++K  GL+ D   Y  L+
Sbjct: 439  METVGIKPNLKTYTTLIHGWARASLPEKGLKCFEQMKQSGLKPDKAVYHCLM 490



 Score =  128 bits (321), Expect = 1e-26
 Identities = 79/289 (27%), Positives = 139/289 (48%)
 Frame = +1

Query: 1    SLIHAYAVGRDMEEALSCMRKMKDEGVELSLVTYSIIVGGFARVGDVEAAEFWFKEARER 180
            ++I A+    +++ AL  + +MK E    +  T+  I+  FA+ G+V  A   F   R  
Sbjct: 208  NIIRAFCGMGNLDRALRIVEEMKKERHMPNSRTFMPIIHAFAKAGEVRRALDVFDMMRRS 267

Query: 181  HETLXXXXXXXXXXXXCQNCRMDRAEALVREMEEEGIDAPIDIYHTMMDGYTMKGDEERC 360
                             +  +M++A  ++ +M   G+      Y T+M GY   GD  + 
Sbjct: 268  GCIPSVHTFNALVLGLVEKRQMEKAVQILDDMLLAGVSPNEYTYTTIMHGYASLGDIGKA 327

Query: 361  LVVFERLKECSLTPSVVSYGCLINLYVKGGKVSKALEVSKMMKLAGIKHNMKTYSMLING 540
               F ++K   L   + +Y  L+    K G++  AL V+K M    I  N   Y++LI+G
Sbjct: 328  CEYFSKVKNEGLELDIYTYEALLKACCKSGRMQSALMVTKEMSAKSIPRNTFVYNILIDG 387

Query: 541  FIKLKDWSNAFAIFEDVIKDGLKPDVILYNNIIRAFCGMGNMDRAIRTVEEMKRARYKPT 720
            + +  D   A  + + + ++G+ PD+  + + I A C  G+M RA+R VEEM+    KP 
Sbjct: 388  WARRGDVWEAADLMQQMRQEGVPPDIHTFTSFINACCKAGDMQRAMRAVEEMETVGIKPN 447

Query: 721  TRTFMPIIHGFARAGETRRALDVFDMMRMSGCVPTVHTFNALILGLVEK 867
             +T+  +IHG+ARA    + L  F+ M+ SG  P    ++ L+  L+ +
Sbjct: 448  LKTYTTLIHGWARASLPEKGLKCFEQMKQSGLKPDKAVYHCLMTSLLSR 496


>ref|XP_006367149.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
            chloroplastic-like isoform X5 [Solanum tuberosum]
            gi|565403403|ref|XP_006367150.1| PREDICTED:
            pentatricopeptide repeat-containing protein At5g04810,
            chloroplastic-like isoform X6 [Solanum tuberosum]
          Length = 584

 Score =  928 bits (2398), Expect = 0.0
 Identities = 444/580 (76%), Positives = 511/580 (88%), Gaps = 1/580 (0%)
 Frame = +1

Query: 34   MEEALSCMRKMKDEGVELSLVTYSIIVGGFARVGDVEAAEFWFKEARERHETLXXXXXXX 213
            MEEAL C+RKMKDEG+ELSLVTYSI++GGFA+VG++EAAE WF+EA++R  TL       
Sbjct: 1    MEEALCCVRKMKDEGIELSLVTYSILIGGFAKVGNIEAAERWFEEAKKRDLTLNAIIYGN 60

Query: 214  XXXXXCQNCRMDRAEALVREMEEEGIDAPIDIYHTMMDGYTMKGDEERCLVVFERLKECS 393
                 CQ   MDRAE LVREMEEE IDAPIDIYHTMMDGYTM G+EE+CL+VF+RLKEC 
Sbjct: 61   IIYANCQTFNMDRAEELVREMEEEDIDAPIDIYHTMMDGYTMIGNEEKCLIVFDRLKECG 120

Query: 394  LTPSVVSYGCLINLYVKGGKVSKALEVSKMMKLAGIKHNMKTYSMLINGFIKLKDWSNAF 573
             TPSVVSYGCL+NLY+K GKVSKA EVS+MMKLAGIKHNMKTYS+L+NGFI LKDW+NAF
Sbjct: 121  FTPSVVSYGCLMNLYIKIGKVSKAFEVSEMMKLAGIKHNMKTYSILMNGFINLKDWANAF 180

Query: 574  AIFEDVIKDGLKPDVILYNNIIRAFCGMGNMDRAIRTVEEMKRARYKPTTRTFMPIIHGF 753
            AIFEDVI+DGLKPDV+LYNNIIRAFCGMGN+DRA+R VEEMK+ R+ P +RTFMPIIH F
Sbjct: 181  AIFEDVIRDGLKPDVVLYNNIIRAFCGMGNLDRALRIVEEMKKERHMPNSRTFMPIIHAF 240

Query: 754  ARAGETRRALDVFDMMRMSGCVPTVHTFNALILGLVEKLQIEKAGEILDEMLLADVRPNK 933
            A+AGE RRALDVFDMMR SGC+P+VHTFNAL+LGLVEK Q+EKA +ILD+MLLA V PN+
Sbjct: 241  AKAGEVRRALDVFDMMRRSGCIPSVHTFNALVLGLVEKRQMEKAVQILDDMLLAGVSPNE 300

Query: 934  HTYTTIMHGYASVGDTGKAFEYFTKLKNEGLELDVYTYEALLKACCKSGRMQSALAVTKE 1113
            +TYTTIMHGYAS+GD GKA EYF+K+KNEGLELD+YTYEALLKACCKSGRMQSAL VTKE
Sbjct: 301  YTYTTIMHGYASLGDIGKACEYFSKVKNEGLELDIYTYEALLKACCKSGRMQSALMVTKE 360

Query: 1114 MNKQGIPRNTFVYNILIDGWARRGDIWEAADLMQQMRQEGVQPDIRTYTSFINACCKAGD 1293
            M+ + IPRNTFVYNILIDGWARRGD+WEAADLMQQMRQEGV PDI T+TSFINACCKAGD
Sbjct: 361  MSAKSIPRNTFVYNILIDGWARRGDVWEAADLMQQMRQEGVPPDIHTFTSFINACCKAGD 420

Query: 1294 MPRATKTIEEMEAFGVKPNVKTYTTLIHGWARASLPEKALKCFEDMKKAGLQPDKAVYHC 1473
            M RA + +EEME  G+KPN+KTYTTLIHGWARASLPEK LKCFE MK++GL+PDKAVYHC
Sbjct: 421  MQRAMRAVEEMETVGIKPNLKTYTTLIHGWARASLPEKGLKCFEQMKQSGLKPDKAVYHC 480

Query: 1474 LMTSLLSRATVA-EDYVYTGILHLCGEMVEAGMTVDMGTAVHWSRCLRKIERTGGGITEA 1650
            LMTSLLSRA  A +DY+ TGI H+C EMVE+G+TVDMGTAVHWS+CLRKIERTGG IT++
Sbjct: 481  LMTSLLSRAAFADQDYIITGIQHVCEEMVESGLTVDMGTAVHWSKCLRKIERTGGDITKS 540

Query: 1651 LQKTFPPDWNSHKTLNAISNTDVHFDGSDANDYDDNLLHE 1770
            LQKTFPPDW SH+TLNA SN + + +GSD+ D + +  +E
Sbjct: 541  LQKTFPPDWGSHRTLNATSNDNENEEGSDSGDDERSSFYE 580



 Score =  155 bits (392), Expect = 7e-35
 Identities = 95/352 (26%), Positives = 166/352 (47%)
 Frame = +1

Query: 4    LIHAYAVGRDMEEALSCMRKMKDEGVELSLVTYSIIVGGFARVGDVEAAEFWFKEARERH 183
            L++ Y     + +A      MK  G++ ++ TYSI++ GF  + D   A   F++     
Sbjct: 131  LMNLYIKIGKVSKAFEVSEMMKLAGIKHNMKTYSILMNGFINLKDWANAFAIFEDVIRDG 190

Query: 184  ETLXXXXXXXXXXXXCQNCRMDRAEALVREMEEEGIDAPIDIYHTMMDGYTMKGDEERCL 363
                           C    +DRA  +V EM++E        +  ++  +   G+  R L
Sbjct: 191  LKPDVVLYNNIIRAFCGMGNLDRALRIVEEMKKERHMPNSRTFMPIIHAFAKAGEVRRAL 250

Query: 364  VVFERLKECSLTPSVVSYGCLINLYVKGGKVSKALEVSKMMKLAGIKHNMKTYSMLINGF 543
             VF+ ++     PSV ++  L+   V+  ++ KA+++   M LAG+  N  TY+ +++G+
Sbjct: 251  DVFDMMRRSGCIPSVHTFNALVLGLVEKRQMEKAVQILDDMLLAGVSPNEYTYTTIMHGY 310

Query: 544  IKLKDWSNAFAIFEDVIKDGLKPDVILYNNIIRAFCGMGNMDRAIRTVEEMKRARYKPTT 723
              L D   A   F  V  +GL+ D+  Y  +++A C  G M  A+   +EM        T
Sbjct: 311  ASLGDIGKACEYFSKVKNEGLELDIYTYEALLKACCKSGRMQSALMVTKEMSAKSIPRNT 370

Query: 724  RTFMPIIHGFARAGETRRALDVFDMMRMSGCVPTVHTFNALILGLVEKLQIEKAGEILDE 903
              +  +I G+AR G+   A D+   MR  G  P +HTF + I    +   +++A   ++E
Sbjct: 371  FVYNILIDGWARRGDVWEAADLMQQMRQEGVPPDIHTFTSFINACCKAGDMQRAMRAVEE 430

Query: 904  MLLADVRPNKHTYTTIMHGYASVGDTGKAFEYFTKLKNEGLELDVYTYEALL 1059
            M    ++PN  TYTT++HG+A      K  + F ++K  GL+ D   Y  L+
Sbjct: 431  METVGIKPNLKTYTTLIHGWARASLPEKGLKCFEQMKQSGLKPDKAVYHCLM 482



 Score =  128 bits (321), Expect = 1e-26
 Identities = 79/289 (27%), Positives = 139/289 (48%)
 Frame = +1

Query: 1    SLIHAYAVGRDMEEALSCMRKMKDEGVELSLVTYSIIVGGFARVGDVEAAEFWFKEARER 180
            ++I A+    +++ AL  + +MK E    +  T+  I+  FA+ G+V  A   F   R  
Sbjct: 200  NIIRAFCGMGNLDRALRIVEEMKKERHMPNSRTFMPIIHAFAKAGEVRRALDVFDMMRRS 259

Query: 181  HETLXXXXXXXXXXXXCQNCRMDRAEALVREMEEEGIDAPIDIYHTMMDGYTMKGDEERC 360
                             +  +M++A  ++ +M   G+      Y T+M GY   GD  + 
Sbjct: 260  GCIPSVHTFNALVLGLVEKRQMEKAVQILDDMLLAGVSPNEYTYTTIMHGYASLGDIGKA 319

Query: 361  LVVFERLKECSLTPSVVSYGCLINLYVKGGKVSKALEVSKMMKLAGIKHNMKTYSMLING 540
               F ++K   L   + +Y  L+    K G++  AL V+K M    I  N   Y++LI+G
Sbjct: 320  CEYFSKVKNEGLELDIYTYEALLKACCKSGRMQSALMVTKEMSAKSIPRNTFVYNILIDG 379

Query: 541  FIKLKDWSNAFAIFEDVIKDGLKPDVILYNNIIRAFCGMGNMDRAIRTVEEMKRARYKPT 720
            + +  D   A  + + + ++G+ PD+  + + I A C  G+M RA+R VEEM+    KP 
Sbjct: 380  WARRGDVWEAADLMQQMRQEGVPPDIHTFTSFINACCKAGDMQRAMRAVEEMETVGIKPN 439

Query: 721  TRTFMPIIHGFARAGETRRALDVFDMMRMSGCVPTVHTFNALILGLVEK 867
             +T+  +IHG+ARA    + L  F+ M+ SG  P    ++ L+  L+ +
Sbjct: 440  LKTYTTLIHGWARASLPEKGLKCFEQMKQSGLKPDKAVYHCLMTSLLSR 488


>ref|XP_004514863.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
            chloroplastic-like [Cicer arietinum]
          Length = 947

 Score =  927 bits (2396), Expect = 0.0
 Identities = 444/597 (74%), Positives = 517/597 (86%)
 Frame = +1

Query: 1    SLIHAYAVGRDMEEALSCMRKMKDEGVELSLVTYSIIVGGFARVGDVEAAEFWFKEARER 180
            SLIHAY VGRDMEEAL C++KMK+EG+E+S+VTYSIIVGG+A+VG+ +AA+ WFKEA+ER
Sbjct: 338  SLIHAYVVGRDMEEALHCVKKMKEEGIEMSIVTYSIIVGGYAKVGNADAADNWFKEAKER 397

Query: 181  HETLXXXXXXXXXXXXCQNCRMDRAEALVREMEEEGIDAPIDIYHTMMDGYTMKGDEERC 360
              +L            CQ C M RAEALVREMEE+GIDAPIDIYHTMMDGYTM G+EE+C
Sbjct: 398  LPSLNAVIYGSIIYAHCQTCNMGRAEALVREMEEQGIDAPIDIYHTMMDGYTMIGNEEKC 457

Query: 361  LVVFERLKECSLTPSVVSYGCLINLYVKGGKVSKALEVSKMMKLAGIKHNMKTYSMLING 540
            L+VFERLKEC  +PSVVSYGCLINLY K GKVSKALE+S++MK  GIKHN+KTYSML NG
Sbjct: 458  LIVFERLKECGFSPSVVSYGCLINLYTKIGKVSKALEISRVMKTVGIKHNLKTYSMLFNG 517

Query: 541  FIKLKDWSNAFAIFEDVIKDGLKPDVILYNNIIRAFCGMGNMDRAIRTVEEMKRARYKPT 720
            F+KLKDW+NAF+IFED+ KDGLKPDVILYNNI++AFCGMGNMDRAI  V++M+R R+K T
Sbjct: 518  FMKLKDWANAFSIFEDITKDGLKPDVILYNNIVKAFCGMGNMDRAICIVKQMQRERHKAT 577

Query: 721  TRTFMPIIHGFARAGETRRALDVFDMMRMSGCVPTVHTFNALILGLVEKLQIEKAGEILD 900
            TRT++PIIHGFARAGET RAL++FD MR SGC+PTVHT+NALILGLVEK Q+EKA  ILD
Sbjct: 578  TRTYLPIIHGFARAGETGRALEIFDKMRRSGCIPTVHTYNALILGLVEKRQMEKAVRILD 637

Query: 901  EMLLADVRPNKHTYTTIMHGYASVGDTGKAFEYFTKLKNEGLELDVYTYEALLKACCKSG 1080
            EM LA V P++HTYTT+M GYAS+GDTGKAF+YFT LKN GLE+DVYTYEALLKACCKSG
Sbjct: 638  EMNLAGVSPDEHTYTTLMQGYASLGDTGKAFQYFTILKNNGLEIDVYTYEALLKACCKSG 697

Query: 1081 RMQSALAVTKEMNKQGIPRNTFVYNILIDGWARRGDIWEAADLMQQMRQEGVQPDIRTYT 1260
            RMQSALAVTKEM+ + IPRNTFVYNILIDGWARRGD+WEAADLMQQMR+EGVQPDI TYT
Sbjct: 698  RMQSALAVTKEMSARKIPRNTFVYNILIDGWARRGDVWEAADLMQQMRKEGVQPDIHTYT 757

Query: 1261 SFINACCKAGDMPRATKTIEEMEAFGVKPNVKTYTTLIHGWARASLPEKALKCFEDMKKA 1440
            SFINACCKAGDM  AT+ IEEMEA G+KPN+KTYTTLIHGWARA+ PEKAL+CFE+MK A
Sbjct: 758  SFINACCKAGDMQNATQIIEEMEARGIKPNLKTYTTLIHGWARAAFPEKALRCFEEMKVA 817

Query: 1441 GLQPDKAVYHCLMTSLLSRATVAEDYVYTGILHLCGEMVEAGMTVDMGTAVHWSRCLRKI 1620
            GL+PD+AVYHCLMTSLLSRAT+A+ Y+Y+G+L +C EMVE+ MTVDMGTAVHWSRCLRKI
Sbjct: 818  GLKPDRAVYHCLMTSLLSRATIAQSYIYSGLLSICREMVESEMTVDMGTAVHWSRCLRKI 877

Query: 1621 ERTGGGITEALQKTFPPDWNSHKTLNAISNTDVHFDGSDANDYDDNLLHEDSNSDNE 1791
            ERTGG +TEALQKTFPPDW SH  L    N ++     +    DD++++  S SDN+
Sbjct: 878  ERTGGELTEALQKTFPPDWISHNILAV--NCEIESADPEIAAADDDIVYYSSGSDND 932



 Score =  193 bits (490), Expect = 3e-46
 Identities = 120/408 (29%), Positives = 200/408 (49%)
 Frame = +1

Query: 256  EALVREMEEEGIDAPIDIYHTMMDGYTMKGDEERCLVVFERLKECSLTPSVVSYGCLINL 435
            +A+VR  E     A  + Y  M+  Y  +GD       FE ++   + PS   Y  LI+ 
Sbjct: 284  QAVVRSFERIKKPARKE-YGLMIKYYARRGDMHHARQTFESMRARGIEPSSHVYSSLIHA 342

Query: 436  YVKGGKVSKALEVSKMMKLAGIKHNMKTYSMLINGFIKLKDWSNAFAIFEDVIKDGLKPD 615
            YV G  + +AL   K MK  GI+ ++ TYS+++ G+ K+ +   A   F++  +     +
Sbjct: 343  YVVGRDMEEALHCVKKMKEEGIEMSIVTYSIIVGGYAKVGNADAADNWFKEAKERLPSLN 402

Query: 616  VILYNNIIRAFCGMGNMDRAIRTVEEMKRARYKPTTRTFMPIIHGFARAGETRRALDVFD 795
             ++Y +II A C   NM RA   V EM+          +  ++ G+   G   + L VF+
Sbjct: 403  AVIYGSIIYAHCQTCNMGRAEALVREMEEQGIDAPIDIYHTMMDGYTMIGNEEKCLIVFE 462

Query: 796  MMRMSGCVPTVHTFNALILGLVEKLQIEKAGEILDEMLLADVRPNKHTYTTIMHGYASVG 975
             ++  G  P+V ++  LI    +  ++ KA EI   M    ++ N  TY+ + +G+  + 
Sbjct: 463  RLKECGFSPSVVSYGCLINLYTKIGKVSKALEISRVMKTVGIKHNLKTYSMLFNGFMKLK 522

Query: 976  DTGKAFEYFTKLKNEGLELDVYTYEALLKACCKSGRMQSALAVTKEMNKQGIPRNTFVYN 1155
            D   AF  F  +  +GL+ DV  Y  ++KA C  G M  A+ + K+M ++     T  Y 
Sbjct: 523  DWANAFSIFEDITKDGLKPDVILYNNIVKAFCGMGNMDRAICIVKQMQRERHKATTRTYL 582

Query: 1156 ILIDGWARRGDIWEAADLMQQMRQEGVQPDIRTYTSFINACCKAGDMPRATKTIEEMEAF 1335
             +I G+AR G+   A ++  +MR+ G  P + TY + I    +   M +A + ++EM   
Sbjct: 583  PIIHGFARAGETGRALEIFDKMRRSGCIPTVHTYNALILGLVEKRQMEKAVRILDEMNLA 642

Query: 1336 GVKPNVKTYTTLIHGWARASLPEKALKCFEDMKKAGLQPDKAVYHCLM 1479
            GV P+  TYTTL+ G+A      KA + F  +K  GL+ D   Y  L+
Sbjct: 643  GVSPDEHTYTTLMQGYASLGDTGKAFQYFTILKNNGLEIDVYTYEALL 690



 Score =  144 bits (363), Expect = 2e-31
 Identities = 93/389 (23%), Positives = 178/389 (45%)
 Frame = +1

Query: 370  FERLKECSLTPSVVSYGCLINLYVKGGKVSKALEVSKMMKLAGIKHNMKTYSMLINGFIK 549
            FER+K+    P+   YG +I  Y + G +  A +  + M+  GI+ +   YS LI+ ++ 
Sbjct: 290  FERIKK----PARKEYGLMIKYYARRGDMHHARQTFESMRARGIEPSSHVYSSLIHAYVV 345

Query: 550  LKDWSNAFAIFEDVIKDGLKPDVILYNNIIRAFCGMGNMDRAIRTVEEMKRARYKPTTRT 729
             +D   A    + + ++G++  ++ Y+ I+  +  +GN D A    +E K          
Sbjct: 346  GRDMEEALHCVKKMKEEGIEMSIVTYSIIVGGYAKVGNADAADNWFKEAKERLPSLNAVI 405

Query: 730  FMPIIHGFARAGETRRALDVFDMMRMSGCVPTVHTFNALILGLVEKLQIEKAGEILDEML 909
            +  II+   +     RA  +   M   G    +  ++ ++ G       EK   + + + 
Sbjct: 406  YGSIIYAHCQTCNMGRAEALVREMEEQGIDAPIDIYHTMMDGYTMIGNEEKCLIVFERLK 465

Query: 910  LADVRPNKHTYTTIMHGYASVGDTGKAFEYFTKLKNEGLELDVYTYEALLKACCKSGRMQ 1089
                 P+  +Y  +++ Y  +G   KA E    +K  G++ ++ TY  L     K     
Sbjct: 466  ECGFSPSVVSYGCLINLYTKIGKVSKALEISRVMKTVGIKHNLKTYSMLFNGFMKLKDWA 525

Query: 1090 SALAVTKEMNKQGIPRNTFVYNILIDGWARRGDIWEAADLMQQMRQEGVQPDIRTYTSFI 1269
            +A ++ +++ K G+  +  +YN ++  +   G++  A  +++QM++E  +   RTY   I
Sbjct: 526  NAFSIFEDITKDGLKPDVILYNNIVKAFCGMGNMDRAICIVKQMQRERHKATTRTYLPII 585

Query: 1270 NACCKAGDMPRATKTIEEMEAFGVKPNVKTYTTLIHGWARASLPEKALKCFEDMKKAGLQ 1449
            +   +AG+  RA +  ++M   G  P V TY  LI G       EKA++  ++M  AG+ 
Sbjct: 586  HGFARAGETGRALEIFDKMRRSGCIPTVHTYNALILGLVEKRQMEKAVRILDEMNLAGVS 645

Query: 1450 PDKAVYHCLMTSLLSRATVAEDYVYTGIL 1536
            PD+  Y  LM    S     + + Y  IL
Sbjct: 646  PDEHTYTTLMQGYASLGDTGKAFQYFTIL 674


>ref|XP_003556878.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
            chloroplastic-like isoform X1 [Glycine max]
          Length = 932

 Score =  924 bits (2387), Expect = 0.0
 Identities = 441/601 (73%), Positives = 517/601 (86%)
 Frame = +1

Query: 1    SLIHAYAVGRDMEEALSCMRKMKDEGVELSLVTYSIIVGGFARVGDVEAAEFWFKEARER 180
            SLIHAYAVGRDMEEAL C+RKMK+EG+E+++VTYSIIVGGFA++G+ +AA+ WF+EA+E+
Sbjct: 324  SLIHAYAVGRDMEEALHCVRKMKEEGIEMTIVTYSIIVGGFAKMGNADAADHWFEEAKEK 383

Query: 181  HETLXXXXXXXXXXXXCQNCRMDRAEALVREMEEEGIDAPIDIYHTMMDGYTMKGDEERC 360
              +L            CQ C MDRAEALVREMEE+GIDAPIDIYHTMMDGYTM G+EE+C
Sbjct: 384  LPSLNAVIYGGIIYAHCQICNMDRAEALVREMEEQGIDAPIDIYHTMMDGYTMIGNEEKC 443

Query: 361  LVVFERLKECSLTPSVVSYGCLINLYVKGGKVSKALEVSKMMKLAGIKHNMKTYSMLING 540
            L+VF+RLKEC   PSV+SYGCLINLY K GKVSKALE+SKMMK++GIKHNMKTYSMLING
Sbjct: 444  LIVFDRLKECGFFPSVISYGCLINLYTKVGKVSKALEISKMMKMSGIKHNMKTYSMLING 503

Query: 541  FIKLKDWSNAFAIFEDVIKDGLKPDVILYNNIIRAFCGMGNMDRAIRTVEEMKRARYKPT 720
            F+KLKDW+NAF++FED  KDGLKPDV+LYNNII AFCGMGNMDRAI  V +M++ R++PT
Sbjct: 504  FLKLKDWANAFSVFEDFTKDGLKPDVVLYNNIITAFCGMGNMDRAICMVRQMQKERHRPT 563

Query: 721  TRTFMPIIHGFARAGETRRALDVFDMMRMSGCVPTVHTFNALILGLVEKLQIEKAGEILD 900
            TRTF+PIIHGFARAGE RRAL++FDMMR SGC+PTVHT+NALILGLVEK Q+ KA  ILD
Sbjct: 564  TRTFLPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTYNALILGLVEKRQMTKAVAILD 623

Query: 901  EMLLADVRPNKHTYTTIMHGYASVGDTGKAFEYFTKLKNEGLELDVYTYEALLKACCKSG 1080
            EM +A V PN+HTYTT+M GYAS+GDT KAF+YFT L+NEGLE+DVYTYEALLK+CCKSG
Sbjct: 624  EMNVAGVGPNEHTYTTLMQGYASLGDTEKAFQYFTVLRNEGLEIDVYTYEALLKSCCKSG 683

Query: 1081 RMQSALAVTKEMNKQGIPRNTFVYNILIDGWARRGDIWEAADLMQQMRQEGVQPDIRTYT 1260
            RMQSALAVTKEM+ + IPRNTFVYNILIDGWARRGD+WEAADLMQQMR+EG+ PDI TYT
Sbjct: 684  RMQSALAVTKEMSAKNIPRNTFVYNILIDGWARRGDVWEAADLMQQMRKEGLLPDIHTYT 743

Query: 1261 SFINACCKAGDMPRATKTIEEMEAFGVKPNVKTYTTLIHGWARASLPEKALKCFEDMKKA 1440
            SFINACCKAGDM +AT+ I+EMEA G+KPN+KTYTTLI+GWARAS+PEKAL CFE+MK A
Sbjct: 744  SFINACCKAGDMQKATEIIQEMEASGIKPNLKTYTTLINGWARASMPEKALSCFEEMKLA 803

Query: 1441 GLQPDKAVYHCLMTSLLSRATVAEDYVYTGILHLCGEMVEAGMTVDMGTAVHWSRCLRKI 1620
            G +PDKAVYHCL+TSLLSRAT A+ YVY+G+L +C EM+E+ M VDMGTAVHWSRCLRKI
Sbjct: 804  GFKPDKAVYHCLVTSLLSRATFAQSYVYSGLLSVCREMIESEMIVDMGTAVHWSRCLRKI 863

Query: 1621 ERTGGGITEALQKTFPPDWNSHKTLNAISNTDVHFDGSDANDYDDNLLHEDSNSDNETDF 1800
            ERTGG +TEALQKTFPPDW SH  L+  S T+      D  D D++ +H + N  N  D 
Sbjct: 864  ERTGGELTEALQKTFPPDWTSHNVLDVNSETETADLQIDDEDEDEDDVHYNVNGINNDDD 923

Query: 1801 D 1803
            D
Sbjct: 924  D 924



 Score =  198 bits (503), Expect = 1e-47
 Identities = 117/392 (29%), Positives = 193/392 (49%)
 Frame = +1

Query: 310  YHTMMDGYTMKGDEERCLVVFERLKECSLTPSVVSYGCLINLYVKGGKVSKALEVSKMMK 489
            Y  M+  Y  +GD       FE ++   + PS   Y  LI+ Y  G  + +AL   + MK
Sbjct: 287  YGLMVKYYGRRGDMHHARQTFESMRARGIEPSSHVYSSLIHAYAVGRDMEEALHCVRKMK 346

Query: 490  LAGIKHNMKTYSMLINGFIKLKDWSNAFAIFEDVIKDGLKPDVILYNNIIRAFCGMGNMD 669
              GI+  + TYS+++ GF K+ +   A   FE+  +     + ++Y  II A C + NMD
Sbjct: 347  EEGIEMTIVTYSIIVGGFAKMGNADAADHWFEEAKEKLPSLNAVIYGGIIYAHCQICNMD 406

Query: 670  RAIRTVEEMKRARYKPTTRTFMPIIHGFARAGETRRALDVFDMMRMSGCVPTVHTFNALI 849
            RA   V EM+          +  ++ G+   G   + L VFD ++  G  P+V ++  LI
Sbjct: 407  RAEALVREMEEQGIDAPIDIYHTMMDGYTMIGNEEKCLIVFDRLKECGFFPSVISYGCLI 466

Query: 850  LGLVEKLQIEKAGEILDEMLLADVRPNKHTYTTIMHGYASVGDTGKAFEYFTKLKNEGLE 1029
                +  ++ KA EI   M ++ ++ N  TY+ +++G+  + D   AF  F     +GL+
Sbjct: 467  NLYTKVGKVSKALEISKMMKMSGIKHNMKTYSMLINGFLKLKDWANAFSVFEDFTKDGLK 526

Query: 1030 LDVYTYEALLKACCKSGRMQSALAVTKEMNKQGIPRNTFVYNILIDGWARRGDIWEAADL 1209
             DV  Y  ++ A C  G M  A+ + ++M K+     T  +  +I G+AR G++  A ++
Sbjct: 527  PDVVLYNNIITAFCGMGNMDRAICMVRQMQKERHRPTTRTFLPIIHGFARAGEMRRALEI 586

Query: 1210 MQQMRQEGVQPDIRTYTSFINACCKAGDMPRATKTIEEMEAFGVKPNVKTYTTLIHGWAR 1389
               MR+ G  P + TY + I    +   M +A   ++EM   GV PN  TYTTL+ G+A 
Sbjct: 587  FDMMRRSGCIPTVHTYNALILGLVEKRQMTKAVAILDEMNVAGVGPNEHTYTTLMQGYAS 646

Query: 1390 ASLPEKALKCFEDMKKAGLQPDKAVYHCLMTS 1485
                EKA + F  ++  GL+ D   Y  L+ S
Sbjct: 647  LGDTEKAFQYFTVLRNEGLEIDVYTYEALLKS 678



 Score =  178 bits (452), Expect = 8e-42
 Identities = 115/459 (25%), Positives = 201/459 (43%), Gaps = 35/459 (7%)
 Frame = +1

Query: 244  MDRAEALVREMEEEGIDAPIDIYHTMMDGYTMKGDEERCLVVFERLKECSLTPSVVSYGC 423
            M  A      M   GI+    +Y +++  Y +  D E  L    ++KE  +  ++V+Y  
Sbjct: 300  MHHARQTFESMRARGIEPSSHVYSSLIHAYAVGRDMEEALHCVRKMKEEGIEMTIVTYSI 359

Query: 424  LINLYVKGG-----------------------------------KVSKALEVSKMMKLAG 498
            ++  + K G                                    + +A  + + M+  G
Sbjct: 360  IVGGFAKMGNADAADHWFEEAKEKLPSLNAVIYGGIIYAHCQICNMDRAEALVREMEEQG 419

Query: 499  IKHNMKTYSMLINGFIKLKDWSNAFAIFEDVIKDGLKPDVILYNNIIRAFCGMGNMDRAI 678
            I   +  Y  +++G+  + +      +F+ + + G  P VI Y  +I  +  +G + +A+
Sbjct: 420  IDAPIDIYHTMMDGYTMIGNEEKCLIVFDRLKECGFFPSVISYGCLINLYTKVGKVSKAL 479

Query: 679  RTVEEMKRARYKPTTRTFMPIIHGFARAGETRRALDVFDMMRMSGCVPTVHTFNALILGL 858
               + MK +  K   +T+  +I+GF +  +   A  VF+     G  P V  +N +I   
Sbjct: 480  EISKMMKMSGIKHNMKTYSMLINGFLKLKDWANAFSVFEDFTKDGLKPDVVLYNNIITAF 539

Query: 859  VEKLQIEKAGEILDEMLLADVRPNKHTYTTIMHGYASVGDTGKAFEYFTKLKNEGLELDV 1038
                 +++A  ++ +M     RP   T+  I+HG+A  G+  +A E F  ++  G    V
Sbjct: 540  CGMGNMDRAICMVRQMQKERHRPTTRTFLPIIHGFARAGEMRRALEIFDMMRRSGCIPTV 599

Query: 1039 YTYEALLKACCKSGRMQSALAVTKEMNKQGIPRNTFVYNILIDGWARRGDIWEAADLMQQ 1218
            +TY AL+    +  +M  A+A+  EMN  G+  N   Y  L+ G+A  GD  +A      
Sbjct: 600  HTYNALILGLVEKRQMTKAVAILDEMNVAGVGPNEHTYTTLMQGYASLGDTEKAFQYFTV 659

Query: 1219 MRQEGVQPDIRTYTSFINACCKAGDMPRATKTIEEMEAFGVKPNVKTYTTLIHGWARASL 1398
            +R EG++ D+ TY + + +CCK+G M  A    +EM A  +  N   Y  LI GWAR   
Sbjct: 660  LRNEGLEIDVYTYEALLKSCCKSGRMQSALAVTKEMSAKNIPRNTFVYNILIDGWARRGD 719

Query: 1399 PEKALKCFEDMKKAGLQPDKAVYHCLMTSLLSRATVAED 1515
              +A    + M+K GL PD   Y    TS ++    A D
Sbjct: 720  VWEAADLMQQMRKEGLLPDIHTY----TSFINACCKAGD 754


>gb|EOY19268.1| Pentatricopeptide repeat-containing protein isoform 3 [Theobroma
            cacao]
          Length = 915

 Score =  923 bits (2385), Expect = 0.0
 Identities = 450/601 (74%), Positives = 515/601 (85%)
 Frame = +1

Query: 1    SLIHAYAVGRDMEEALSCMRKMKDEGVELSLVTYSIIVGGFARVGDVEAAEFWFKEARER 180
            +LIHAYAVGRDMEEALSC+RKMK+EG+E++LVTYSI+VGGFA++G+ +            
Sbjct: 337  NLIHAYAVGRDMEEALSCVRKMKEEGIEMTLVTYSILVGGFAKIGNSD------------ 384

Query: 181  HETLXXXXXXXXXXXXCQNCRMDRAEALVREMEEEGIDAPIDIYHTMMDGYTMKGDEERC 360
                             Q C M+RAEALVREMEEEGIDAPIDIYHTMMDGYTM G+EE+C
Sbjct: 385  -----------------QTCNMERAEALVREMEEEGIDAPIDIYHTMMDGYTMIGNEEKC 427

Query: 361  LVVFERLKECSLTPSVVSYGCLINLYVKGGKVSKALEVSKMMKLAGIKHNMKTYSMLING 540
            L+VFERLKEC   PSV+SYGCLINLY K GKVSKALEVSKMM+  GIKHNMKTYSMLING
Sbjct: 428  LIVFERLKECGFIPSVISYGCLINLYSKIGKVSKALEVSKMMECDGIKHNMKTYSMLING 487

Query: 541  FIKLKDWSNAFAIFEDVIKDGLKPDVILYNNIIRAFCGMGNMDRAIRTVEEMKRARYKPT 720
            F+KLKDW+NAFAIFED+++DGLKPDV+LYNNIIRAFCGMGNMDRAI TV+EM + R++PT
Sbjct: 488  FLKLKDWANAFAIFEDLVEDGLKPDVVLYNNIIRAFCGMGNMDRAIHTVKEMLKERHRPT 547

Query: 721  TRTFMPIIHGFARAGETRRALDVFDMMRMSGCVPTVHTFNALILGLVEKLQIEKAGEILD 900
            TRTFMPIIH FARAGE RRA +VFD+MR SGC PTVHTFNALILGL EK Q+EKA EILD
Sbjct: 548  TRTFMPIIHAFARAGEMRRAWEVFDVMRRSGCSPTVHTFNALILGLTEKRQMEKAVEILD 607

Query: 901  EMLLADVRPNKHTYTTIMHGYASVGDTGKAFEYFTKLKNEGLELDVYTYEALLKACCKSG 1080
            EM LA + PN+HTYTTIMHGYAS+GDT KAF YFTKL+NEGLE+DVYTYEALLKACCKSG
Sbjct: 608  EMTLAGISPNEHTYTTIMHGYASLGDTAKAFGYFTKLRNEGLEIDVYTYEALLKACCKSG 667

Query: 1081 RMQSALAVTKEMNKQGIPRNTFVYNILIDGWARRGDIWEAADLMQQMRQEGVQPDIRTYT 1260
            RMQSALAVTKEM+ + IPRNTFVYNIL+DGWARRGD+WEAADLMQQM+QEGVQPDI TYT
Sbjct: 668  RMQSALAVTKEMSARKIPRNTFVYNILVDGWARRGDVWEAADLMQQMKQEGVQPDIHTYT 727

Query: 1261 SFINACCKAGDMPRATKTIEEMEAFGVKPNVKTYTTLIHGWARASLPEKALKCFEDMKKA 1440
            SFINACCKAGDM RA KTI+EM+A GVKPNVKTYTTLIHGWARASLPEKALKCFE+MK A
Sbjct: 728  SFINACCKAGDMLRAMKTIQEMDAIGVKPNVKTYTTLIHGWARASLPEKALKCFEEMKLA 787

Query: 1441 GLQPDKAVYHCLMTSLLSRATVAEDYVYTGILHLCGEMVEAGMTVDMGTAVHWSRCLRKI 1620
            GL+PDKAVYHCLMTSLLSRAT AE Y+Y+G+L +C EM+++G+TVDMGTAVHWSRCLRKI
Sbjct: 788  GLKPDKAVYHCLMTSLLSRATFAEAYIYSGVLSVCREMIDSGLTVDMGTAVHWSRCLRKI 847

Query: 1621 ERTGGGITEALQKTFPPDWNSHKTLNAISNTDVHFDGSDANDYDDNLLHEDSNSDNETDF 1800
            ERTGG +TEALQKTFPPDW+S+ T+ A  N+D   D    +D+DDN ++  + ++ + D 
Sbjct: 848  ERTGGELTEALQKTFPPDWSSYHTIAA--NSDTETDDELESDHDDNDVYFANVTEGDHDL 905

Query: 1801 D 1803
            D
Sbjct: 906  D 906



 Score =  144 bits (362), Expect = 2e-31
 Identities = 95/351 (27%), Positives = 164/351 (46%), Gaps = 22/351 (6%)
 Frame = +1

Query: 553  KDWSNAFAIFEDVIKDGLKPDVILYNNIIRAFCGMGNMDRAIRTVEEMKRARYKPTTRTF 732
            ++W      FE + K   +   ++ N   R     G+M RA  T E M+    +PT+  +
Sbjct: 280  ENWQKVVTAFERITKPARREFGLMVNYYARR----GDMHRARETFERMRARGIEPTSHVY 335

Query: 733  MPIIHGFARAGETRRALDVFDMMRMSGCVPTVHTFNALILGLV------EKLQIEKAGEI 894
              +IH +A   +   AL     M+  G   T+ T++ L+ G        +   +E+A  +
Sbjct: 336  TNLIHAYAVGRDMEEALSCVRKMKEEGIEMTLVTYSILVGGFAKIGNSDQTCNMERAEAL 395

Query: 895  LDEMLLADVRPNKHTYTTIMHGYASVGDTGKAFEYFTKLKNEGLELDVYTYEALLKACCK 1074
            + EM    +      Y T+M GY  +G+  K    F +LK  G    V +Y  L+    K
Sbjct: 396  VREMEEEGIDAPIDIYHTMMDGYTMIGNEEKCLIVFERLKECGFIPSVISYGCLINLYSK 455

Query: 1075 SGRMQSALAVTKEMNKQGIPRNTFVYNILIDGWARRGDIWEAADLMQQMRQEGVQPDIRT 1254
             G++  AL V+K M   GI  N   Y++LI+G+ +  D   A  + + + ++G++PD+  
Sbjct: 456  IGKVSKALEVSKMMECDGIKHNMKTYSMLINGFLKLKDWANAFAIFEDLVEDGLKPDVVL 515

Query: 1255 YTSFINACCKAGDMPRATKTIEEMEAFGVKPNVKTYTTLIHGWARASLPEKALKCFEDMK 1434
            Y + I A C  G+M RA  T++EM     +P  +T+  +IH +ARA    +A + F+ M+
Sbjct: 516  YNNIIRAFCGMGNMDRAIHTVKEMLKERHRPTTRTFMPIIHAFARAGEMRRAWEVFDVMR 575

Query: 1435 KAGLQPDKAVYHCLMTSL------------LSRATVA----EDYVYTGILH 1539
            ++G  P    ++ L+  L            L   T+A     ++ YT I+H
Sbjct: 576  RSGCSPTVHTFNALILGLTEKRQMEKAVEILDEMTLAGISPNEHTYTTIMH 626


>gb|EXB55868.1| Pentatricopeptide repeat-containing protein [Morus notabilis]
          Length = 946

 Score =  922 bits (2384), Expect = 0.0
 Identities = 451/602 (74%), Positives = 515/602 (85%), Gaps = 3/602 (0%)
 Frame = +1

Query: 1    SLIHAYAVGRDMEEALSCMRKMKDEGVELSLVTYSIIVGGFARVGDVEAAEFWFKEARER 180
            SLIHAYAVGRDMEEALSC+RKMK+EG+E+SLVTYSIIVGGFA++G+ +            
Sbjct: 372  SLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSIIVGGFAKMGNAD------------ 419

Query: 181  HETLXXXXXXXXXXXXCQNCRMDRAEALVREMEEEGIDAPIDIYHTMMDGYTMKGDEERC 360
                             Q C  +RAEALVREMEE GIDA IDIYHTMMDGYTM G+E++C
Sbjct: 420  -----------------QTCNTERAEALVREMEEVGIDASIDIYHTMMDGYTMIGNEDKC 462

Query: 361  LVVFERLKECSLTPSVVSYGCLINLYVKGGKVSKALEVSKMMKLAGIKHNMKTYSMLING 540
            LVVFERLKEC  TPSV+SYGCLINLY K GKVSKALEVSK M+ AGIKHNMKTYSMLING
Sbjct: 463  LVVFERLKECGFTPSVISYGCLINLYTKVGKVSKALEVSKKMESAGIKHNMKTYSMLING 522

Query: 541  FIKLKDWSNAFAIFEDVIKDGLKPDVILYNNIIRAFCGMGNMDRAIRTVEEMKRARYKPT 720
            F++LKDW+NAFA+FEDVIKDGLKPDV+LYNNIIRAFCGMGNMDRA++T+++M+++R++PT
Sbjct: 523  FLRLKDWTNAFAVFEDVIKDGLKPDVVLYNNIIRAFCGMGNMDRAVQTIKDMQKSRHRPT 582

Query: 721  TRTFMPIIHGFARAGETRRALDVFDMMRMSGCVPTVHTFNALILGLVEKLQIEKAGEILD 900
            TR+FMPIIHGFARAGE RRAL++FDMMRMSGC+PTVHTFNALILGLVEK Q+EKA EI+D
Sbjct: 583  TRSFMPIIHGFARAGEMRRALEIFDMMRMSGCIPTVHTFNALILGLVEKRQMEKAVEIVD 642

Query: 901  EMLLADVRPNKHTYTTIMHGYASVGDTGKAFEYFTKLKNEGLELDVYTYEALLKACCKSG 1080
            EM LA V PN+HTYTTIMHGYAS+GDTGKAFEYFTKL+NEGLELDV+TYEALLKACCK+G
Sbjct: 643  EMTLAGVSPNEHTYTTIMHGYASLGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKAG 702

Query: 1081 RMQSALAVTKEMNKQGIPRNTFVYNILIDGWARRGDIWEAADLMQQMRQEGVQPDIRTYT 1260
            RMQSALAVTKEM+ Q IPRNTFVYNILIDGWARRGD+WEAADLMQQM+QEGVQPDI TYT
Sbjct: 703  RMQSALAVTKEMSNQKIPRNTFVYNILIDGWARRGDVWEAADLMQQMKQEGVQPDIHTYT 762

Query: 1261 SFINACCKAGDMPRATKTIEEMEAFGVKPNVKTYTTLIHGWARASLPEKALKCFEDMKKA 1440
            SFINAC +AGDM RATKTI+EM+ FGVKPNVKTYTTLI+GWARAS+PEKALKCF++MK  
Sbjct: 763  SFINACSRAGDMLRATKTIQEMQTFGVKPNVKTYTTLINGWARASVPEKALKCFDEMKLT 822

Query: 1441 GLQPDKAVYHCLMTSLLSRATVAEDYVYTGILHLCGEMVEAGMTVDMGTAVHWSRCLRKI 1620
            GL+PDKAVYHCLMTSLLSRA VAE YVY+GIL +CGEM+E+G T+DMGTAVHWS+CLRKI
Sbjct: 823  GLKPDKAVYHCLMTSLLSRAQVAESYVYSGILSICGEMIESGFTIDMGTAVHWSKCLRKI 882

Query: 1621 ERTGGGITEALQKTFPPDWNSHKTLNAISNTDVHFDGSDANDYDDNL---LHEDSNSDNE 1791
            ER GG +TEALQKTFPPDWN    L   S+     D  D  D D+ +   +  DSN D +
Sbjct: 883  ERGGGELTEALQKTFPPDWNISHGLEVTSD----IDSDDEIDNDNEIYSAVDTDSNGDGD 938

Query: 1792 TD 1797
            +D
Sbjct: 939  SD 940



 Score =  177 bits (449), Expect = 2e-41
 Identities = 101/367 (27%), Positives = 182/367 (49%), Gaps = 6/367 (1%)
 Frame = +1

Query: 397  TPSVVSYGCLINLYVKGGKVSKALEVSKMMKLAGIKHNMKTYSMLINGFIKLKDWSNAFA 576
            +PS   YG ++  Y + G + +A E  + M+  GI+ +   YS LI+ +   +D   A +
Sbjct: 329  SPSRREYGLMVKYYARRGDMHRARETFESMRARGIEPSSHVYSSLIHAYAVGRDMEEALS 388

Query: 577  IFEDVIKDGLKPDVILYNNIIRAFCGMGNMDRAIRT------VEEMKRARYKPTTRTFMP 738
                + ++G++  ++ Y+ I+  F  MGN D+   T      V EM+      +   +  
Sbjct: 389  CVRKMKEEGIEMSLVTYSIIVGGFAKMGNADQTCNTERAEALVREMEEVGIDASIDIYHT 448

Query: 739  IIHGFARAGETRRALDVFDMMRMSGCVPTVHTFNALILGLVEKLQIEKAGEILDEMLLAD 918
            ++ G+   G   + L VF+ ++  G  P+V ++  LI    +  ++ KA E+  +M  A 
Sbjct: 449  MMDGYTMIGNEDKCLVVFERLKECGFTPSVISYGCLINLYTKVGKVSKALEVSKKMESAG 508

Query: 919  VRPNKHTYTTIMHGYASVGDTGKAFEYFTKLKNEGLELDVYTYEALLKACCKSGRMQSAL 1098
            ++ N  TY+ +++G+  + D   AF  F  +  +GL+ DV  Y  +++A C  G M  A+
Sbjct: 509  IKHNMKTYSMLINGFLRLKDWTNAFAVFEDVIKDGLKPDVVLYNNIIRAFCGMGNMDRAV 568

Query: 1099 AVTKEMNKQGIPRNTFVYNILIDGWARRGDIWEAADLMQQMRQEGVQPDIRTYTSFINAC 1278
               K+M K      T  +  +I G+AR G++  A ++   MR  G  P + T+ + I   
Sbjct: 569  QTIKDMQKSRHRPTTRSFMPIIHGFARAGEMRRALEIFDMMRMSGCIPTVHTFNALILGL 628

Query: 1279 CKAGDMPRATKTIEEMEAFGVKPNVKTYTTLIHGWARASLPEKALKCFEDMKKAGLQPDK 1458
             +   M +A + ++EM   GV PN  TYTT++HG+A      KA + F  ++  GL+ D 
Sbjct: 629  VEKRQMEKAVEIVDEMTLAGVSPNEHTYTTIMHGYASLGDTGKAFEYFTKLRNEGLELDV 688

Query: 1459 AVYHCLM 1479
              Y  L+
Sbjct: 689  FTYEALL 695


>ref|XP_006605717.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
            chloroplastic-like isoform X2 [Glycine max]
          Length = 931

 Score =  919 bits (2375), Expect = 0.0
 Identities = 441/601 (73%), Positives = 517/601 (86%)
 Frame = +1

Query: 1    SLIHAYAVGRDMEEALSCMRKMKDEGVELSLVTYSIIVGGFARVGDVEAAEFWFKEARER 180
            SLIHAYAVGRDMEEAL C+RKMK+EG+E+++VTYSIIVGGFA++G+ +AA+ WF+EA+E+
Sbjct: 324  SLIHAYAVGRDMEEALHCVRKMKEEGIEMTIVTYSIIVGGFAKMGNADAADHWFEEAKEK 383

Query: 181  HETLXXXXXXXXXXXXCQNCRMDRAEALVREMEEEGIDAPIDIYHTMMDGYTMKGDEERC 360
              +L            CQ C MDRAEALVREMEE+GIDAPIDIYHTMMDGYTM G+EE+C
Sbjct: 384  LPSLNAVIYGGIIYAHCQICNMDRAEALVREMEEQGIDAPIDIYHTMMDGYTMIGNEEKC 443

Query: 361  LVVFERLKECSLTPSVVSYGCLINLYVKGGKVSKALEVSKMMKLAGIKHNMKTYSMLING 540
            L+VF+RLKEC   PSV+SYGCLINLY K GKVSKALE+SKMMK++GIKHNMKTYSMLING
Sbjct: 444  LIVFDRLKECGFFPSVISYGCLINLYTKVGKVSKALEISKMMKMSGIKHNMKTYSMLING 503

Query: 541  FIKLKDWSNAFAIFEDVIKDGLKPDVILYNNIIRAFCGMGNMDRAIRTVEEMKRARYKPT 720
            F+KLKDW+NAF++FED  KDGLKPDV+LYNNII AFCGMGNMDRAI  V +M++ R++PT
Sbjct: 504  FLKLKDWANAFSVFEDFTKDGLKPDVVLYNNIITAFCGMGNMDRAICMVRQMQKERHRPT 563

Query: 721  TRTFMPIIHGFARAGETRRALDVFDMMRMSGCVPTVHTFNALILGLVEKLQIEKAGEILD 900
            TRTF+PIIHGFARAGE RRAL++FDMMR SGC+PTVHT+NALILGLVEK Q+ KA  ILD
Sbjct: 564  TRTFLPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTYNALILGLVEKRQMTKAVAILD 623

Query: 901  EMLLADVRPNKHTYTTIMHGYASVGDTGKAFEYFTKLKNEGLELDVYTYEALLKACCKSG 1080
            EM +A V PN+HTYTT+M GYAS+GDT KAF+YFT L+NEGLE+DVYTYEALLK+CCKSG
Sbjct: 624  EMNVAGVGPNEHTYTTLMQGYASLGDTEKAFQYFTVLRNEGLEIDVYTYEALLKSCCKSG 683

Query: 1081 RMQSALAVTKEMNKQGIPRNTFVYNILIDGWARRGDIWEAADLMQQMRQEGVQPDIRTYT 1260
            RMQSALAVTKEM+ + IPRNTFVYNILIDGWARRGD+WEAADLMQQMR+EG+ PDI TYT
Sbjct: 684  RMQSALAVTKEMSAKNIPRNTFVYNILIDGWARRGDVWEAADLMQQMRKEGLLPDIHTYT 743

Query: 1261 SFINACCKAGDMPRATKTIEEMEAFGVKPNVKTYTTLIHGWARASLPEKALKCFEDMKKA 1440
            SFINACCKAGDM +AT+ I+EMEA G+KPN+KTYTTLI+GWARAS+PEKAL CFE+MK A
Sbjct: 744  SFINACCKAGDM-QATEIIQEMEASGIKPNLKTYTTLINGWARASMPEKALSCFEEMKLA 802

Query: 1441 GLQPDKAVYHCLMTSLLSRATVAEDYVYTGILHLCGEMVEAGMTVDMGTAVHWSRCLRKI 1620
            G +PDKAVYHCL+TSLLSRAT A+ YVY+G+L +C EM+E+ M VDMGTAVHWSRCLRKI
Sbjct: 803  GFKPDKAVYHCLVTSLLSRATFAQSYVYSGLLSVCREMIESEMIVDMGTAVHWSRCLRKI 862

Query: 1621 ERTGGGITEALQKTFPPDWNSHKTLNAISNTDVHFDGSDANDYDDNLLHEDSNSDNETDF 1800
            ERTGG +TEALQKTFPPDW SH  L+  S T+      D  D D++ +H + N  N  D 
Sbjct: 863  ERTGGELTEALQKTFPPDWTSHNVLDVNSETETADLQIDDEDEDEDDVHYNVNGINNDDD 922

Query: 1801 D 1803
            D
Sbjct: 923  D 923



 Score =  198 bits (503), Expect = 1e-47
 Identities = 117/392 (29%), Positives = 193/392 (49%)
 Frame = +1

Query: 310  YHTMMDGYTMKGDEERCLVVFERLKECSLTPSVVSYGCLINLYVKGGKVSKALEVSKMMK 489
            Y  M+  Y  +GD       FE ++   + PS   Y  LI+ Y  G  + +AL   + MK
Sbjct: 287  YGLMVKYYGRRGDMHHARQTFESMRARGIEPSSHVYSSLIHAYAVGRDMEEALHCVRKMK 346

Query: 490  LAGIKHNMKTYSMLINGFIKLKDWSNAFAIFEDVIKDGLKPDVILYNNIIRAFCGMGNMD 669
              GI+  + TYS+++ GF K+ +   A   FE+  +     + ++Y  II A C + NMD
Sbjct: 347  EEGIEMTIVTYSIIVGGFAKMGNADAADHWFEEAKEKLPSLNAVIYGGIIYAHCQICNMD 406

Query: 670  RAIRTVEEMKRARYKPTTRTFMPIIHGFARAGETRRALDVFDMMRMSGCVPTVHTFNALI 849
            RA   V EM+          +  ++ G+   G   + L VFD ++  G  P+V ++  LI
Sbjct: 407  RAEALVREMEEQGIDAPIDIYHTMMDGYTMIGNEEKCLIVFDRLKECGFFPSVISYGCLI 466

Query: 850  LGLVEKLQIEKAGEILDEMLLADVRPNKHTYTTIMHGYASVGDTGKAFEYFTKLKNEGLE 1029
                +  ++ KA EI   M ++ ++ N  TY+ +++G+  + D   AF  F     +GL+
Sbjct: 467  NLYTKVGKVSKALEISKMMKMSGIKHNMKTYSMLINGFLKLKDWANAFSVFEDFTKDGLK 526

Query: 1030 LDVYTYEALLKACCKSGRMQSALAVTKEMNKQGIPRNTFVYNILIDGWARRGDIWEAADL 1209
             DV  Y  ++ A C  G M  A+ + ++M K+     T  +  +I G+AR G++  A ++
Sbjct: 527  PDVVLYNNIITAFCGMGNMDRAICMVRQMQKERHRPTTRTFLPIIHGFARAGEMRRALEI 586

Query: 1210 MQQMRQEGVQPDIRTYTSFINACCKAGDMPRATKTIEEMEAFGVKPNVKTYTTLIHGWAR 1389
               MR+ G  P + TY + I    +   M +A   ++EM   GV PN  TYTTL+ G+A 
Sbjct: 587  FDMMRRSGCIPTVHTYNALILGLVEKRQMTKAVAILDEMNVAGVGPNEHTYTTLMQGYAS 646

Query: 1390 ASLPEKALKCFEDMKKAGLQPDKAVYHCLMTS 1485
                EKA + F  ++  GL+ D   Y  L+ S
Sbjct: 647  LGDTEKAFQYFTVLRNEGLEIDVYTYEALLKS 678



 Score =  181 bits (460), Expect = 1e-42
 Identities = 121/483 (25%), Positives = 212/483 (43%), Gaps = 35/483 (7%)
 Frame = +1

Query: 244  MDRAEALVREMEEEGIDAPIDIYHTMMDGYTMKGDEERCLVVFERLKECSLTPSVVSYGC 423
            M  A      M   GI+    +Y +++  Y +  D E  L    ++KE  +  ++V+Y  
Sbjct: 300  MHHARQTFESMRARGIEPSSHVYSSLIHAYAVGRDMEEALHCVRKMKEEGIEMTIVTYSI 359

Query: 424  LINLYVKGG-----------------------------------KVSKALEVSKMMKLAG 498
            ++  + K G                                    + +A  + + M+  G
Sbjct: 360  IVGGFAKMGNADAADHWFEEAKEKLPSLNAVIYGGIIYAHCQICNMDRAEALVREMEEQG 419

Query: 499  IKHNMKTYSMLINGFIKLKDWSNAFAIFEDVIKDGLKPDVILYNNIIRAFCGMGNMDRAI 678
            I   +  Y  +++G+  + +      +F+ + + G  P VI Y  +I  +  +G + +A+
Sbjct: 420  IDAPIDIYHTMMDGYTMIGNEEKCLIVFDRLKECGFFPSVISYGCLINLYTKVGKVSKAL 479

Query: 679  RTVEEMKRARYKPTTRTFMPIIHGFARAGETRRALDVFDMMRMSGCVPTVHTFNALILGL 858
               + MK +  K   +T+  +I+GF +  +   A  VF+     G  P V  +N +I   
Sbjct: 480  EISKMMKMSGIKHNMKTYSMLINGFLKLKDWANAFSVFEDFTKDGLKPDVVLYNNIITAF 539

Query: 859  VEKLQIEKAGEILDEMLLADVRPNKHTYTTIMHGYASVGDTGKAFEYFTKLKNEGLELDV 1038
                 +++A  ++ +M     RP   T+  I+HG+A  G+  +A E F  ++  G    V
Sbjct: 540  CGMGNMDRAICMVRQMQKERHRPTTRTFLPIIHGFARAGEMRRALEIFDMMRRSGCIPTV 599

Query: 1039 YTYEALLKACCKSGRMQSALAVTKEMNKQGIPRNTFVYNILIDGWARRGDIWEAADLMQQ 1218
            +TY AL+    +  +M  A+A+  EMN  G+  N   Y  L+ G+A  GD  +A      
Sbjct: 600  HTYNALILGLVEKRQMTKAVAILDEMNVAGVGPNEHTYTTLMQGYASLGDTEKAFQYFTV 659

Query: 1219 MRQEGVQPDIRTYTSFINACCKAGDMPRATKTIEEMEAFGVKPNVKTYTTLIHGWARASL 1398
            +R EG++ D+ TY + + +CCK+G M  A    +EM A  +  N   Y  LI GWAR   
Sbjct: 660  LRNEGLEIDVYTYEALLKSCCKSGRMQSALAVTKEMSAKNIPRNTFVYNILIDGWARRGD 719

Query: 1399 PEKALKCFEDMKKAGLQPDKAVYHCLMTSLLSRATVAEDYVYTGILHLCGEMVEAGMTVD 1578
              +A    + M+K GL PD   Y    TS ++    A D   T I+    EM  +G+  +
Sbjct: 720  VWEAADLMQQMRKEGLLPDIHTY----TSFINACCKAGDMQATEIIQ---EMEASGIKPN 772

Query: 1579 MGT 1587
            + T
Sbjct: 773  LKT 775