BLASTX nr result
ID: Catharanthus22_contig00015606
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00015606
(1020 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006364435.1| PREDICTED: DNA-directed RNA polymerase V sub... 296 1e-77
ref|XP_004237333.1| PREDICTED: DNA-directed RNA polymerases I, I... 296 1e-77
ref|XP_002323257.2| hypothetical protein POPTR_0016s03800g [Popu... 273 6e-71
gb|EMJ03728.1| hypothetical protein PRUPE_ppa010980mg [Prunus pe... 271 2e-70
emb|CBI30093.3| unnamed protein product [Vitis vinifera] 271 3e-70
gb|EOY09046.1| Eukaryotic rpb5 RNA polymerase subunit family pro... 271 4e-70
ref|XP_002529165.1| DNA-directed RNA polymerase II, putative [Ri... 270 5e-70
ref|XP_004230150.1| PREDICTED: DNA-directed RNA polymerases I, I... 270 7e-70
ref|XP_003632734.1| PREDICTED: DNA-directed RNA polymerases I, I... 270 7e-70
ref|XP_006347844.1| PREDICTED: DNA-directed RNA polymerase V sub... 268 3e-69
ref|XP_006442079.1| hypothetical protein CICLE_v10021999mg [Citr... 268 3e-69
ref|XP_004136650.1| PREDICTED: DNA-directed RNA polymerases I, I... 267 4e-69
ref|XP_004303601.1| PREDICTED: DNA-directed RNA polymerases I, I... 266 1e-68
ref|NP_001236527.1| uncharacterized protein LOC100306033 [Glycin... 264 5e-68
ref|XP_004493418.1| PREDICTED: DNA-directed RNA polymerases I, I... 263 6e-68
ref|XP_003625033.1| DNA-directed RNA polymerases I, II, and III ... 261 3e-67
gb|ESW34110.1| hypothetical protein PHAVU_001G125200g [Phaseolus... 259 2e-66
gb|AFK43162.1| unknown [Medicago truncatula] 259 2e-66
gb|EPS63634.1| hypothetical protein M569_11151 [Genlisea aurea] 254 5e-65
gb|EXB41191.1| DNA-directed RNA polymerases I, II, and III subun... 245 2e-62
>ref|XP_006364435.1| PREDICTED: DNA-directed RNA polymerase V subunit 5A-like [Solanum
tuberosum]
Length = 227
Score = 296 bits (757), Expect = 1e-77
Identities = 143/225 (63%), Positives = 182/225 (80%)
Frame = -2
Query: 935 DMAGMEMDDLAENFGRCLKSLVDEGSIVSRRYYLSRRTVLEMLRDRGYLVPDAELELTLQ 756
D+ G+ MD +N G CL S VD+G++ S RY+L+RRT+LEML+DRG+ +P++E++ TLQ
Sbjct: 2 DLNGLAMDVDGDNLGTCLASFVDDGTVESHRYFLARRTILEMLKDRGFAIPNSEIDTTLQ 61
Query: 755 EFRDKYTQDPDVSRLRISALHKDDPSNKILVLYCGPSVVKVNTIRLMGQQIMNGESLAGL 576
EFR+KY Q PDV RLR+SA+H++D +NK+LV++CGP+ VKVN IR + QIMN ESL+ L
Sbjct: 62 EFREKYGQTPDVERLRVSAMHRNDLTNKVLVIFCGPNAVKVNVIRSILTQIMNKESLSRL 121
Query: 575 ILIIQNQITSQAMKTVELFSFKVEIFQITDLLVNITKHVLKPRHQXXXXXXXXXXXXKYS 396
IL+IQNQ+T+ AMK VELFSFKVEIFQITDLLVNITKHVLKPRH+ KY+
Sbjct: 122 ILVIQNQMTNPAMKAVELFSFKVEIFQITDLLVNITKHVLKPRHELLTDTEKEKLLKKYN 181
Query: 395 IGEKQLPWMLQKDAIARYYGLEKGQVLKVTYNSDVFEQHVTYRCI 261
+ EKQLP M QKDAIARYYGLEKGQV+KVTY+S++ E HVTYRC+
Sbjct: 182 LEEKQLPRMSQKDAIARYYGLEKGQVVKVTYSSEIIETHVTYRCV 226
>ref|XP_004237333.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC1-like [Solanum lycopersicum]
Length = 227
Score = 296 bits (757), Expect = 1e-77
Identities = 143/225 (63%), Positives = 182/225 (80%)
Frame = -2
Query: 935 DMAGMEMDDLAENFGRCLKSLVDEGSIVSRRYYLSRRTVLEMLRDRGYLVPDAELELTLQ 756
D+ G+ MD EN G CL S VD+G++ S RY+L+RRT+LEML+DRG+ +P++E++ TLQ
Sbjct: 2 DLNGLAMDVDGENLGTCLASFVDDGTVESHRYFLARRTILEMLKDRGFAIPNSEIDTTLQ 61
Query: 755 EFRDKYTQDPDVSRLRISALHKDDPSNKILVLYCGPSVVKVNTIRLMGQQIMNGESLAGL 576
EFR+KY Q PDV RLR+SA+H++D +NK+LV++CGP+ VKVN IR + QIMN ESL+ L
Sbjct: 62 EFREKYGQTPDVERLRVSAMHRNDLTNKVLVIFCGPNAVKVNVIRSILTQIMNKESLSRL 121
Query: 575 ILIIQNQITSQAMKTVELFSFKVEIFQITDLLVNITKHVLKPRHQXXXXXXXXXXXXKYS 396
IL+IQNQ+T+ A+K VELFSFKVEIFQITDLLVNITKHVLKPRH+ KY+
Sbjct: 122 ILVIQNQMTNPALKAVELFSFKVEIFQITDLLVNITKHVLKPRHELLTDTEKEKLLKKYN 181
Query: 395 IGEKQLPWMLQKDAIARYYGLEKGQVLKVTYNSDVFEQHVTYRCI 261
+ EKQLP M QKDAIARYYGLEKGQV+KVTY+S++ E HVTYRC+
Sbjct: 182 LEEKQLPRMSQKDAIARYYGLEKGQVVKVTYSSEIIETHVTYRCV 226
>ref|XP_002323257.2| hypothetical protein POPTR_0016s03800g [Populus trichocarpa]
gi|550320761|gb|EEF05018.2| hypothetical protein
POPTR_0016s03800g [Populus trichocarpa]
Length = 243
Score = 273 bits (699), Expect = 6e-71
Identities = 133/214 (62%), Positives = 167/214 (78%)
Frame = -2
Query: 902 ENFGRCLKSLVDEGSIVSRRYYLSRRTVLEMLRDRGYLVPDAELELTLQEFRDKYTQDPD 723
E+ GRCL S VDEGS S RYYLSRRTVLEML+DRGY VP +E++++LQ+FR Y Q+PD
Sbjct: 29 ESLGRCLSSFVDEGSTESHRYYLSRRTVLEMLKDRGYSVPSSEIDISLQDFRGVYGQNPD 88
Query: 722 VSRLRISALHKDDPSNKILVLYCGPSVVKVNTIRLMGQQIMNGESLAGLILIIQNQITSQ 543
+ L+ SA HK DPS ++LV++CG VVKV IRL+ QI + +SL GLIL++QN IT+Q
Sbjct: 89 IELLKFSATHKSDPSKRMLVIFCGLGVVKVGMIRLITVQITDRDSLTGLILVLQNNITNQ 148
Query: 542 AMKTVELFSFKVEIFQITDLLVNITKHVLKPRHQXXXXXXXXXXXXKYSIGEKQLPWMLQ 363
AMK ++LF FK+EIFQITDLLVNITKH+LKP+HQ KYSI EKQLP +L+
Sbjct: 149 AMKALDLFKFKIEIFQITDLLVNITKHILKPKHQVLSEQAKQRLLKKYSIEEKQLPRLLK 208
Query: 362 KDAIARYYGLEKGQVLKVTYNSDVFEQHVTYRCI 261
KDAI+RYYGLE+GQV+KVTY+ D+ HVTYRC+
Sbjct: 209 KDAISRYYGLERGQVVKVTYDGDITGSHVTYRCV 242
>gb|EMJ03728.1| hypothetical protein PRUPE_ppa010980mg [Prunus persica]
Length = 228
Score = 271 bits (694), Expect = 2e-70
Identities = 137/218 (62%), Positives = 165/218 (75%)
Frame = -2
Query: 914 DDLAENFGRCLKSLVDEGSIVSRRYYLSRRTVLEMLRDRGYLVPDAELELTLQEFRDKYT 735
D E G CL VD+GS S RYYLSRRTVLEM+RDRGY VP +E++L+LQ+FR +
Sbjct: 10 DANGEILGPCLTGYVDDGSPESHRYYLSRRTVLEMIRDRGYSVPSSEIDLSLQDFRALHG 69
Query: 734 QDPDVSRLRISALHKDDPSNKILVLYCGPSVVKVNTIRLMGQQIMNGESLAGLILIIQNQ 555
Q+PDV RLR SA H+ DPS++I+V+YCGP +VKVN IR + QI N ++L GLILI QNQ
Sbjct: 70 QNPDVERLRFSATHRTDPSDRIMVIYCGPGIVKVNVIRGLHSQIANKDTLNGLILITQNQ 129
Query: 554 ITSQAMKTVELFSFKVEIFQITDLLVNITKHVLKPRHQXXXXXXXXXXXXKYSIGEKQLP 375
ITSQA+KT+EL+ FK EIFQITDLLVNITKHVLKP+H KY+I E QLP
Sbjct: 130 ITSQALKTMELYPFKTEIFQITDLLVNITKHVLKPKHHVLTEQEKQKLLKKYNIEENQLP 189
Query: 374 WMLQKDAIARYYGLEKGQVLKVTYNSDVFEQHVTYRCI 261
+ +KDAIA+YYGLEKGQV+KVTY D+ E HVTYRCI
Sbjct: 190 RLSRKDAIAQYYGLEKGQVVKVTYTGDITESHVTYRCI 227
>emb|CBI30093.3| unnamed protein product [Vitis vinifera]
Length = 330
Score = 271 bits (693), Expect = 3e-70
Identities = 139/232 (59%), Positives = 172/232 (74%), Gaps = 2/232 (0%)
Frame = -2
Query: 950 VAIERDMAGMEMDDLAENFG--RCLKSLVDEGSIVSRRYYLSRRTVLEMLRDRGYLVPDA 777
+ + D G DL +F RCL S VDEG I S RYYL+RRT+LEMLRDRGY +P
Sbjct: 98 IRVSMDGGGWFDGDLNGDFEVKRCLSSFVDEGRIESHRYYLARRTLLEMLRDRGYSIPAL 157
Query: 776 ELELTLQEFRDKYTQDPDVSRLRISALHKDDPSNKILVLYCGPSVVKVNTIRLMGQQIMN 597
+++++LQ+FR Y+Q PD RLRISA + DPS KILV++CGP VVKVN IR + QI+N
Sbjct: 158 DIDISLQDFRSFYSQKPDPDRLRISAALRSDPSKKILVIFCGPDVVKVNAIRSIATQIVN 217
Query: 596 GESLAGLILIIQNQITSQAMKTVELFSFKVEIFQITDLLVNITKHVLKPRHQXXXXXXXX 417
+SL+ LIL++QN ITSQA+K V+LFSF+VE FQITDLLVNITKHVLKP+H+
Sbjct: 218 KDSLSKLILVLQNHITSQALKAVDLFSFQVEKFQITDLLVNITKHVLKPKHRVLTDQEKN 277
Query: 416 XXXXKYSIGEKQLPWMLQKDAIARYYGLEKGQVLKVTYNSDVFEQHVTYRCI 261
KYS+ EKQLP MLQ+DAIARYYGLEKGQV+KV YN ++ HVTYRC+
Sbjct: 278 KLLKKYSLNEKQLPRMLQQDAIARYYGLEKGQVVKVIYNGEITGSHVTYRCV 329
>gb|EOY09046.1| Eukaryotic rpb5 RNA polymerase subunit family protein isoform 1
[Theobroma cacao]
Length = 228
Score = 271 bits (692), Expect = 4e-70
Identities = 139/223 (62%), Positives = 169/223 (75%), Gaps = 1/223 (0%)
Frame = -2
Query: 926 GMEMDDL-AENFGRCLKSLVDEGSIVSRRYYLSRRTVLEMLRDRGYLVPDAELELTLQEF 750
G+E D E G+CL +VD+GS S RYYLSRRTVLEMLRDRGY VP +E+ L+LQEF
Sbjct: 5 GLEGDGSNGEALGKCLSGVVDDGSTESHRYYLSRRTVLEMLRDRGYAVPISEINLSLQEF 64
Query: 749 RDKYTQDPDVSRLRISALHKDDPSNKILVLYCGPSVVKVNTIRLMGQQIMNGESLAGLIL 570
R Y Q PD RLR+SA HK DPS +ILV++ GP +VKV+ IRL+ I N ESL GLIL
Sbjct: 65 RAIYGQSPDFDRLRLSATHKTDPSKRILVVFYGPGMVKVSGIRLIAGLITNKESLTGLIL 124
Query: 569 IIQNQITSQAMKTVELFSFKVEIFQITDLLVNITKHVLKPRHQXXXXXXXXXXXXKYSIG 390
++QN IT+QA+K ++LFSFKVEIFQITDLLVNITKHVLKP+HQ KYSI
Sbjct: 125 VLQNHITNQALKALDLFSFKVEIFQITDLLVNITKHVLKPKHQVLTEQEKQKLLQKYSIE 184
Query: 389 EKQLPWMLQKDAIARYYGLEKGQVLKVTYNSDVFEQHVTYRCI 261
EKQLP +L+KDAIARYYG E+GQV+KV Y+ ++ + HVTYRC+
Sbjct: 185 EKQLPRLLKKDAIARYYGYERGQVVKVMYDGEITQSHVTYRCV 227
>ref|XP_002529165.1| DNA-directed RNA polymerase II, putative [Ricinus communis]
gi|223531389|gb|EEF33224.1| DNA-directed RNA polymerase
II, putative [Ricinus communis]
Length = 238
Score = 270 bits (691), Expect = 5e-70
Identities = 131/214 (61%), Positives = 165/214 (77%)
Frame = -2
Query: 902 ENFGRCLKSLVDEGSIVSRRYYLSRRTVLEMLRDRGYLVPDAELELTLQEFRDKYTQDPD 723
E G+C S D+G+ + RYYLSRRTVLEMLRDRGY VP +E++L+LQEFR + +PD
Sbjct: 24 EGLGKCFSSYADDGTHETHRYYLSRRTVLEMLRDRGYSVPSSEIDLSLQEFRAIHGPNPD 83
Query: 722 VSRLRISALHKDDPSNKILVLYCGPSVVKVNTIRLMGQQIMNGESLAGLILIIQNQITSQ 543
+ RL+ SA H DPS ++LVL+ GP ++KV+TIR + QI+N +SL GLIL++QNQIT+Q
Sbjct: 84 IDRLKFSATHTSDPSKRMLVLFGGPGIIKVSTIRAIAGQIVNKDSLTGLILVLQNQITNQ 143
Query: 542 AMKTVELFSFKVEIFQITDLLVNITKHVLKPRHQXXXXXXXXXXXXKYSIGEKQLPWMLQ 363
AMK V+LF FKVE+FQITDLLVNITKHVLKP+HQ Y I EKQLP +L+
Sbjct: 144 AMKAVDLFKFKVEMFQITDLLVNITKHVLKPKHQVLTDREKQKLLKDYCIEEKQLPRLLR 203
Query: 362 KDAIARYYGLEKGQVLKVTYNSDVFEQHVTYRCI 261
KDAIARYYGLEKGQV+KVTY+ ++ E HVTYRC+
Sbjct: 204 KDAIARYYGLEKGQVVKVTYSGEITESHVTYRCV 237
>ref|XP_004230150.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC1-like [Solanum lycopersicum]
Length = 227
Score = 270 bits (690), Expect = 7e-70
Identities = 134/225 (59%), Positives = 172/225 (76%)
Frame = -2
Query: 935 DMAGMEMDDLAENFGRCLKSLVDEGSIVSRRYYLSRRTVLEMLRDRGYLVPDAELELTLQ 756
D+ G M+ N CL S VD+G++ S RY+L+R+T+LEML+DRG+ +P++E+E TLQ
Sbjct: 2 DVNGSAMEVDVVNVSPCLTSFVDDGTVESHRYFLARKTMLEMLKDRGFAIPNSEIETTLQ 61
Query: 755 EFRDKYTQDPDVSRLRISALHKDDPSNKILVLYCGPSVVKVNTIRLMGQQIMNGESLAGL 576
EFR+KY Q PDV RLRISA+H+ D +NK+LV++CGP+ VK+N IR + QIMN ESL+ L
Sbjct: 62 EFREKYGQRPDVERLRISAMHRTDLTNKVLVIFCGPNSVKMNVIRNILSQIMNKESLSRL 121
Query: 575 ILIIQNQITSQAMKTVELFSFKVEIFQITDLLVNITKHVLKPRHQXXXXXXXXXXXXKYS 396
ILII+N +T+ AMK VE FK EIFQITDLLVNITKHVLKP+H+ KY+
Sbjct: 122 ILIIENPMTNPAMKVVEDSPFKTEIFQITDLLVNITKHVLKPKHELLTNAEKEQLLKKYN 181
Query: 395 IGEKQLPWMLQKDAIARYYGLEKGQVLKVTYNSDVFEQHVTYRCI 261
+ EKQLP M QKDAIARYYGLEKGQV+KVTYN+++ E H TYRC+
Sbjct: 182 LEEKQLPRMSQKDAIARYYGLEKGQVVKVTYNNEIIETHATYRCV 226
>ref|XP_003632734.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC1-like [Vitis vinifera]
Length = 229
Score = 270 bits (690), Expect = 7e-70
Identities = 134/210 (63%), Positives = 164/210 (78%)
Frame = -2
Query: 890 RCLKSLVDEGSIVSRRYYLSRRTVLEMLRDRGYLVPDAELELTLQEFRDKYTQDPDVSRL 711
RCL S VDEG I S RYYL+RRT+LEMLRDRGY +P +++++LQ+FR Y+Q PD RL
Sbjct: 19 RCLSSFVDEGRIESHRYYLARRTLLEMLRDRGYSIPALDIDISLQDFRSFYSQKPDPDRL 78
Query: 710 RISALHKDDPSNKILVLYCGPSVVKVNTIRLMGQQIMNGESLAGLILIIQNQITSQAMKT 531
RISA + DPS KILV++CGP VVKVN IR + QI+N +SL+ LIL++QN ITSQA+K
Sbjct: 79 RISAALRSDPSKKILVIFCGPDVVKVNAIRSIATQIVNKDSLSKLILVLQNHITSQALKA 138
Query: 530 VELFSFKVEIFQITDLLVNITKHVLKPRHQXXXXXXXXXXXXKYSIGEKQLPWMLQKDAI 351
V+LFSF+VE FQITDLLVNITKHVLKP+H+ KYS+ EKQLP MLQ+DAI
Sbjct: 139 VDLFSFQVEKFQITDLLVNITKHVLKPKHRVLTDQEKNKLLKKYSLNEKQLPRMLQQDAI 198
Query: 350 ARYYGLEKGQVLKVTYNSDVFEQHVTYRCI 261
ARYYGLEKGQV+KV YN ++ HVTYRC+
Sbjct: 199 ARYYGLEKGQVVKVIYNGEITGSHVTYRCV 228
>ref|XP_006347844.1| PREDICTED: DNA-directed RNA polymerase V subunit 5A-like [Solanum
tuberosum]
Length = 227
Score = 268 bits (685), Expect = 3e-69
Identities = 132/225 (58%), Positives = 172/225 (76%)
Frame = -2
Query: 935 DMAGMEMDDLAENFGRCLKSLVDEGSIVSRRYYLSRRTVLEMLRDRGYLVPDAELELTLQ 756
D+ G M+ N CL S VD+G++ S RY+L+R+T+LEML+DRG+ +P++E++ TLQ
Sbjct: 2 DVNGSAMEVDVVNVSPCLASFVDDGTVESHRYFLARKTMLEMLKDRGFAIPNSEIDTTLQ 61
Query: 755 EFRDKYTQDPDVSRLRISALHKDDPSNKILVLYCGPSVVKVNTIRLMGQQIMNGESLAGL 576
EFR+KY Q PD RLRISA+H+ D +NK+LV++CGP+ VK+N IR + QIMN ESL+ L
Sbjct: 62 EFREKYGQRPDAERLRISAMHRTDLTNKVLVIFCGPNSVKMNVIRSILSQIMNKESLSRL 121
Query: 575 ILIIQNQITSQAMKTVELFSFKVEIFQITDLLVNITKHVLKPRHQXXXXXXXXXXXXKYS 396
ILII+N +T+ AMK VE FK EIFQITDLLVNITKHVLKP+H+ KY+
Sbjct: 122 ILIIENPMTNPAMKVVEDSPFKTEIFQITDLLVNITKHVLKPKHELLTNTEKEQLLKKYN 181
Query: 395 IGEKQLPWMLQKDAIARYYGLEKGQVLKVTYNSDVFEQHVTYRCI 261
+ +KQLP M QKDAIARYYGLEKGQV+KVTYN+++ E HVTYRC+
Sbjct: 182 LEDKQLPRMSQKDAIARYYGLEKGQVVKVTYNNEIIETHVTYRCV 226
>ref|XP_006442079.1| hypothetical protein CICLE_v10021999mg [Citrus clementina]
gi|568879109|ref|XP_006492520.1| PREDICTED: DNA-directed
RNA polymerase V subunit 5A-like isoform X1 [Citrus
sinensis] gi|557544341|gb|ESR55319.1| hypothetical
protein CICLE_v10021999mg [Citrus clementina]
Length = 236
Score = 268 bits (684), Expect = 3e-69
Identities = 136/209 (65%), Positives = 162/209 (77%)
Frame = -2
Query: 887 CLKSLVDEGSIVSRRYYLSRRTVLEMLRDRGYLVPDAELELTLQEFRDKYTQDPDVSRLR 708
CL VD GS S RYYLSRRTVLEML+DRGY V +E+ L++Q+FR Y QDPDV RLR
Sbjct: 27 CLSGFVDNGSRDSLRYYLSRRTVLEMLKDRGYAVALSEINLSVQDFRAIYGQDPDVDRLR 86
Query: 707 ISALHKDDPSNKILVLYCGPSVVKVNTIRLMGQQIMNGESLAGLILIIQNQITSQAMKTV 528
IS H+ DPS +ILV++CGP +VKVN IR + QI+N ++L GLILI+QNQITSQA K V
Sbjct: 87 ISISHQSDPSKRILVVFCGPGIVKVNVIRSIISQIVNRDTLTGLILILQNQITSQATKAV 146
Query: 527 ELFSFKVEIFQITDLLVNITKHVLKPRHQXXXXXXXXXXXXKYSIGEKQLPWMLQKDAIA 348
LF FKVE+FQITDLLVNITKHVLKP+HQ KYSI EKQLP ML+KDAIA
Sbjct: 147 GLFQFKVEMFQITDLLVNITKHVLKPKHQVLTDQEKEKLLKKYSIEEKQLPRMLKKDAIA 206
Query: 347 RYYGLEKGQVLKVTYNSDVFEQHVTYRCI 261
+YYGLE+GQV+KVTY+ ++ E HVTYRC+
Sbjct: 207 QYYGLERGQVVKVTYSGEITESHVTYRCV 235
>ref|XP_004136650.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC1-like [Cucumis sativus]
gi|449524637|ref|XP_004169328.1| PREDICTED: DNA-directed
RNA polymerases I, II, and III subunit RPABC1-like
[Cucumis sativus]
Length = 227
Score = 267 bits (683), Expect = 4e-69
Identities = 132/222 (59%), Positives = 163/222 (73%)
Frame = -2
Query: 926 GMEMDDLAENFGRCLKSLVDEGSIVSRRYYLSRRTVLEMLRDRGYLVPDAELELTLQEFR 747
G E + FG CL S +D+G+ S RY+LSRRTV+EML+DRGY + ++ +LQ+FR
Sbjct: 5 GFEAEPNPVEFGTCLSSYIDDGTTESHRYFLSRRTVVEMLKDRGYTINSPNIDFSLQQFR 64
Query: 746 DKYTQDPDVSRLRISALHKDDPSNKILVLYCGPSVVKVNTIRLMGQQIMNGESLAGLILI 567
+ + Q PDV RL++SA H DPS ++LV++CG VKVN IR + QI N +SL GLILI
Sbjct: 65 ETFGQFPDVDRLKLSAAHHSDPSKRVLVVFCGTGAVKVNAIRNIAGQIANKDSLHGLILI 124
Query: 566 IQNQITSQAMKTVELFSFKVEIFQITDLLVNITKHVLKPRHQXXXXXXXXXXXXKYSIGE 387
+QNQIT+QAMK VELFSFKVEIFQITDLLVNITKH LKP HQ +YSI E
Sbjct: 125 VQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEE 184
Query: 386 KQLPWMLQKDAIARYYGLEKGQVLKVTYNSDVFEQHVTYRCI 261
KQLP ML+ DAIARYYGLEKGQV+KVTY+ D+ H+TYRC+
Sbjct: 185 KQLPRMLRTDAIARYYGLEKGQVVKVTYDGDMTRAHITYRCV 226
>ref|XP_004303601.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC1-like isoform 1 [Fragaria vesca subsp. vesca]
Length = 225
Score = 266 bits (679), Expect = 1e-68
Identities = 130/211 (61%), Positives = 164/211 (77%)
Frame = -2
Query: 893 GRCLKSLVDEGSIVSRRYYLSRRTVLEMLRDRGYLVPDAELELTLQEFRDKYTQDPDVSR 714
G CL VD+GS S RY+LSRRTVLEMLRDRGY VP +E++L+LQ+FR + Q+PD R
Sbjct: 14 GPCLSGFVDDGSTESHRYFLSRRTVLEMLRDRGYSVPSSEIDLSLQDFRSLHGQNPDADR 73
Query: 713 LRISALHKDDPSNKILVLYCGPSVVKVNTIRLMGQQIMNGESLAGLILIIQNQITSQAMK 534
L S +H DPS ++LV+YCGP +VKVN IR + QI N ++L+GLILI+Q QITSQA+K
Sbjct: 74 LCFSTVHSSDPSERMLVIYCGPGIVKVNVIRGLHSQIANKDTLSGLILILQGQITSQALK 133
Query: 533 TVELFSFKVEIFQITDLLVNITKHVLKPRHQXXXXXXXXXXXXKYSIGEKQLPWMLQKDA 354
T++L+ FKVEIFQITDLLVNITKHVLKP+HQ K++I EKQLP + QKDA
Sbjct: 134 TLDLYPFKVEIFQITDLLVNITKHVLKPQHQVLTEQAKQALLKKFNIEEKQLPRISQKDA 193
Query: 353 IARYYGLEKGQVLKVTYNSDVFEQHVTYRCI 261
IA+YYGLE+GQV+KVTY+ D+ + HVTYRC+
Sbjct: 194 IAKYYGLERGQVVKVTYSGDITKGHVTYRCV 224
>ref|NP_001236527.1| uncharacterized protein LOC100306033 [Glycine max]
gi|255627335|gb|ACU14012.1| unknown [Glycine max]
Length = 237
Score = 264 bits (674), Expect = 5e-68
Identities = 134/222 (60%), Positives = 163/222 (73%)
Frame = -2
Query: 926 GMEMDDLAENFGRCLKSLVDEGSIVSRRYYLSRRTVLEMLRDRGYLVPDAELELTLQEFR 747
G E ++ AE CL VD GS+ S RYYLSRRT LEML+DRGY +P E++L+L +FR
Sbjct: 15 GGEEEEEAEQAKGCLSKFVDNGSVESHRYYLSRRTTLEMLKDRGYSIPSHEIDLSLSDFR 74
Query: 746 DKYTQDPDVSRLRISALHKDDPSNKILVLYCGPSVVKVNTIRLMGQQIMNGESLAGLILI 567
D + Q PD RLR+S H + S +ILV++CGP VVKV IR QI+N ++L GLILI
Sbjct: 75 DIHGQFPDPDRLRLSLTHATNSSKRILVIFCGPGVVKVTAIRNTAGQIINRDTLTGLILI 134
Query: 566 IQNQITSQAMKTVELFSFKVEIFQITDLLVNITKHVLKPRHQXXXXXXXXXXXXKYSIGE 387
++N ITSQA+K V LFSFKVEIFQITDLLVNITKHVLKP+HQ KY+I E
Sbjct: 135 VENHITSQALKAVNLFSFKVEIFQITDLLVNITKHVLKPKHQVLTDKQKINLLKKYNIEE 194
Query: 386 KQLPWMLQKDAIARYYGLEKGQVLKVTYNSDVFEQHVTYRCI 261
KQLP MLQ DAIARYYGLE+GQV+KVTY+ +V + HVTYRC+
Sbjct: 195 KQLPRMLQTDAIARYYGLERGQVVKVTYSGEVTQMHVTYRCV 236
>ref|XP_004493418.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC1-like [Cicer arietinum]
Length = 244
Score = 263 bits (673), Expect = 6e-68
Identities = 128/211 (60%), Positives = 162/211 (76%)
Frame = -2
Query: 893 GRCLKSLVDEGSIVSRRYYLSRRTVLEMLRDRGYLVPDAELELTLQEFRDKYTQDPDVSR 714
G+CL + +D+GS+ S RYYLSRRT LEML+DRGY +P +E++L+L EFR + PDV R
Sbjct: 33 GKCLITKIDDGSVESHRYYLSRRTTLEMLKDRGYSIPPSEIQLSLHEFRQTHGHSPDVDR 92
Query: 713 LRISALHKDDPSNKILVLYCGPSVVKVNTIRLMGQQIMNGESLAGLILIIQNQITSQAMK 534
LR +A H +PS +ILV++ GP +VKVN +R + QI+N ++L GLILI+Q+QITSQA+K
Sbjct: 93 LRFTATHTTNPSKRILVIFSGPGIVKVNVVRNIAGQIVNRDTLTGLILIVQSQITSQALK 152
Query: 533 TVELFSFKVEIFQITDLLVNITKHVLKPRHQXXXXXXXXXXXXKYSIGEKQLPWMLQKDA 354
V L SFKVEIFQITDLLVNITKHVLKP+HQ KY+I EKQLP MLQ DA
Sbjct: 153 AVNLLSFKVEIFQITDLLVNITKHVLKPKHQVLTDKQKKNLLKKYNIQEKQLPRMLQTDA 212
Query: 353 IARYYGLEKGQVLKVTYNSDVFEQHVTYRCI 261
IARYYGLE+GQV+KVTY ++ + HVTYRC+
Sbjct: 213 IARYYGLERGQVVKVTYTGEITQMHVTYRCV 243
>ref|XP_003625033.1| DNA-directed RNA polymerases I, II, and III subunit RPABC1
[Medicago truncatula] gi|124359979|gb|ABN07995.1| RNA
polymerase subunit, RPB5; RNA polymerase Rpb5,
N-terminal [Medicago truncatula]
gi|355500048|gb|AES81251.1| DNA-directed RNA polymerases
I, II, and III subunit RPABC1 [Medicago truncatula]
Length = 248
Score = 261 bits (667), Expect = 3e-67
Identities = 133/240 (55%), Positives = 169/240 (70%)
Frame = -2
Query: 980 GEGESSERKFVAIERDMAGMEMDDLAENFGRCLKSLVDEGSIVSRRYYLSRRTVLEMLRD 801
G+ ++E +E + + + +CL + D GSI S RYYLSRRTVLEML+D
Sbjct: 8 GQNGTTETAITTMEIENGDITTQPQLQEQPQCLFTKKDNGSIESHRYYLSRRTVLEMLKD 67
Query: 800 RGYLVPDAELELTLQEFRDKYTQDPDVSRLRISALHKDDPSNKILVLYCGPSVVKVNTIR 621
RGY +P E++L+L +FR + Q PDV RLR++A H +PS +ILV++ GP +VKVN +R
Sbjct: 68 RGYSIPSDEIQLSLDDFRQIHGQSPDVDRLRLTATHATNPSKRILVVFSGPGIVKVNGVR 127
Query: 620 LMGQQIMNGESLAGLILIIQNQITSQAMKTVELFSFKVEIFQITDLLVNITKHVLKPRHQ 441
+ QI+N ESL GLILI+QNQITSQA+K V L SFKVEIFQITDLLVN TKHVLKP+HQ
Sbjct: 128 DIAGQIVNRESLTGLILIVQNQITSQALKAVNLLSFKVEIFQITDLLVNATKHVLKPKHQ 187
Query: 440 XXXXXXXXXXXXKYSIGEKQLPWMLQKDAIARYYGLEKGQVLKVTYNSDVFEQHVTYRCI 261
KY I EKQLP MLQ DAIARYYGL++GQV+KVTY ++ + HVTYRC+
Sbjct: 188 VLTDKQKKNLLKKYDIQEKQLPRMLQTDAIARYYGLQRGQVVKVTYTGEITQMHVTYRCV 247
>gb|ESW34110.1| hypothetical protein PHAVU_001G125200g [Phaseolus vulgaris]
Length = 242
Score = 259 bits (661), Expect = 2e-66
Identities = 127/225 (56%), Positives = 166/225 (73%)
Frame = -2
Query: 935 DMAGMEMDDLAENFGRCLKSLVDEGSIVSRRYYLSRRTVLEMLRDRGYLVPDAELELTLQ 756
+ G E ++ + G CL +D+G++ S RYYLSRRT LEML+DRGY +P E++L+L
Sbjct: 18 EQEGAEQEETEQVKG-CLSKFIDDGTVESHRYYLSRRTTLEMLKDRGYSIPSNEIDLSLS 76
Query: 755 EFRDKYTQDPDVSRLRISALHKDDPSNKILVLYCGPSVVKVNTIRLMGQQIMNGESLAGL 576
+FR + PD RLR+S H +PS +ILV++CGP VVKV IR + QI+N ++L+GL
Sbjct: 77 QFRHMHGHSPDPDRLRLSLAHATNPSKRILVIFCGPGVVKVTAIRNIAGQIVNRDTLSGL 136
Query: 575 ILIIQNQITSQAMKTVELFSFKVEIFQITDLLVNITKHVLKPRHQXXXXXXXXXXXXKYS 396
ILI++N +TSQA+K V LFSFKVEIFQITDLLVNITKHVLKP+HQ K++
Sbjct: 137 ILIVENHVTSQALKAVGLFSFKVEIFQITDLLVNITKHVLKPKHQVLTDRQKKNLLKKFN 196
Query: 395 IGEKQLPWMLQKDAIARYYGLEKGQVLKVTYNSDVFEQHVTYRCI 261
I EKQLP MLQ DAIARYYGLE+GQV+KVTY+ ++ + HVTYRC+
Sbjct: 197 IEEKQLPRMLQTDAIARYYGLERGQVVKVTYSGEITQMHVTYRCV 241
>gb|AFK43162.1| unknown [Medicago truncatula]
Length = 248
Score = 259 bits (661), Expect = 2e-66
Identities = 132/240 (55%), Positives = 168/240 (70%)
Frame = -2
Query: 980 GEGESSERKFVAIERDMAGMEMDDLAENFGRCLKSLVDEGSIVSRRYYLSRRTVLEMLRD 801
G+ ++E +E + + + +CL + D GSI S RYYLSRRTVLEML+D
Sbjct: 8 GQNGTTETAITTMEIENGDITTQPQLQEQPQCLFTKKDNGSIESHRYYLSRRTVLEMLKD 67
Query: 800 RGYLVPDAELELTLQEFRDKYTQDPDVSRLRISALHKDDPSNKILVLYCGPSVVKVNTIR 621
RGY +P E++L+L +FR + Q PDV RLR++A H +PS +ILV++ GP +VKVN +R
Sbjct: 68 RGYSIPSDEIQLSLDDFRQIHGQSPDVDRLRLTATHATNPSKRILVVFSGPGIVKVNGVR 127
Query: 620 LMGQQIMNGESLAGLILIIQNQITSQAMKTVELFSFKVEIFQITDLLVNITKHVLKPRHQ 441
+ QI+N ESL GLILI+QNQITSQA+K V L SFKVEI QITDLLVN TKHVLKP+HQ
Sbjct: 128 DIAGQIVNRESLTGLILIVQNQITSQALKAVNLLSFKVEILQITDLLVNATKHVLKPKHQ 187
Query: 440 XXXXXXXXXXXXKYSIGEKQLPWMLQKDAIARYYGLEKGQVLKVTYNSDVFEQHVTYRCI 261
KY I EKQLP MLQ DAIARYYGL++GQV+KVTY ++ + HVTYRC+
Sbjct: 188 VLTDKQKKNLLKKYDIQEKQLPRMLQTDAIARYYGLQRGQVVKVTYTGEITQMHVTYRCV 247
>gb|EPS63634.1| hypothetical protein M569_11151 [Genlisea aurea]
Length = 241
Score = 254 bits (648), Expect = 5e-65
Identities = 127/225 (56%), Positives = 164/225 (72%), Gaps = 11/225 (4%)
Frame = -2
Query: 902 ENFGRCLKSLVDEGSIVSRRYYLSRRTVLEMLRDRGYLVPDAELELTLQEFRDKYTQDPD 723
EN G CL S VD+GS+ S RYYL+R+T+LEML+DRG+ + A++++TLQEFR ++++ P
Sbjct: 16 ENLGTCLSSFVDKGSLESHRYYLARKTLLEMLKDRGFAISPADIDITLQEFRIRHSESPS 75
Query: 722 VSRLRISALHKDDPSNKILVLYCGPSVVKVNTIRLMGQQIMNGESLAGLILIIQNQITSQ 543
V L+I+ALH DDPS K+LVL+CGP +VKVN IR + + N +++ LIL+ Q++ITSQ
Sbjct: 76 VDGLKITALHGDDPSIKVLVLFCGPGIVKVNQIRAIAGDVYNNGTISSLILVAQSKITSQ 135
Query: 542 AMKTVELFSFKVEIFQITDLLVNITKHVLKPRHQXXXXXXXXXXXXKYSIGEKQ------ 381
A+K V + FKVEIFQITDLLVNITKH LKP+HQ KYSI EKQ
Sbjct: 136 ALKAVNILKFKVEIFQITDLLVNITKHDLKPKHQILSAEEKADLLSKYSIEEKQASKSKK 195
Query: 380 -----LPWMLQKDAIARYYGLEKGQVLKVTYNSDVFEQHVTYRCI 261
LP MLQKDAIARYYGLEKGQV+KVTY ++ + HVTYRC+
Sbjct: 196 ASEAFLPRMLQKDAIARYYGLEKGQVVKVTYGGELTQLHVTYRCV 240
>gb|EXB41191.1| DNA-directed RNA polymerases I, II, and III subunit RPABC1 [Morus
notabilis]
Length = 231
Score = 245 bits (626), Expect = 2e-62
Identities = 119/214 (55%), Positives = 157/214 (73%)
Frame = -2
Query: 902 ENFGRCLKSLVDEGSIVSRRYYLSRRTVLEMLRDRGYLVPDAELELTLQEFRDKYTQDPD 723
E G CL SL+D+GS+ S RY+LSR T+LEML+DRGY VP +++ L+L +FR Y Q PD
Sbjct: 17 ETLGTCLSSLIDKGSVESHRYFLSRITLLEMLKDRGYSVPSSDINLSLHDFRQIYGQIPD 76
Query: 722 VSRLRISALHKDDPSNKILVLYCGPSVVKVNTIRLMGQQIMNGESLAGLILIIQNQITSQ 543
V RLR S H DPS +ILV++C P VVKV ++R + QI+N +L GLIL++Q+Q+T+Q
Sbjct: 77 VDRLRFSVTHLSDPSKRILVIFCEPGVVKVTSVRGIAGQIVNRNTLTGLILVLQSQMTNQ 136
Query: 542 AMKTVELFSFKVEIFQITDLLVNITKHVLKPRHQXXXXXXXXXXXXKYSIGEKQLPWMLQ 363
A K VEL FKVEIFQITDLL+NITKH+L+P+H+ KYSI KQLP M +
Sbjct: 137 AQKAVELLPFKVEIFQITDLLINITKHLLRPKHRVLTDQEKQKLLKKYSIEVKQLPRMSK 196
Query: 362 KDAIARYYGLEKGQVLKVTYNSDVFEQHVTYRCI 261
DAIARYYGLEKGQV+K+ Y+ + + ++TYRC+
Sbjct: 197 NDAIARYYGLEKGQVVKIIYSGGITDSYITYRCV 230