BLASTX nr result
ID: Catharanthus22_contig00015599
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00015599
(549 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002278416.2| PREDICTED: transcription elongation factor S... 158 2e-47
emb|CBI32841.3| unnamed protein product [Vitis vinifera] 158 6e-47
ref|XP_006300644.1| hypothetical protein CARUB_v10019652mg [Caps... 152 2e-44
ref|XP_004309652.1| PREDICTED: transcription elongation factor S... 147 5e-44
gb|EMJ05505.1| hypothetical protein PRUPE_ppa000164mg [Prunus pe... 148 5e-44
ref|XP_006391558.1| hypothetical protein EUTSA_v10018001mg [Eutr... 149 1e-43
ref|XP_002322597.2| hypothetical protein POPTR_0016s02900g [Popu... 151 1e-43
ref|XP_006339248.1| PREDICTED: transcription elongation factor S... 149 2e-43
ref|XP_006339249.1| PREDICTED: transcription elongation factor S... 149 2e-43
ref|XP_006482016.1| PREDICTED: transcription elongation factor S... 147 5e-43
ref|XP_006430480.1| hypothetical protein CICLE_v10013566mg, part... 147 5e-43
ref|XP_004249330.1| PREDICTED: transcription elongation factor S... 147 6e-43
gb|AAC27151.1| Similar to gb|U46691 putative chromatin structure... 146 8e-43
ref|NP_176723.3| transcription elongation factor SPT6-like prote... 146 8e-43
ref|NP_001077775.1| transcription elongation factor SPT6-like pr... 146 8e-43
ref|NP_001185317.1| transcription elongation factor SPT6-like pr... 146 8e-43
gb|EOY19521.1| Global transcription factor group B1 isoform 1 [T... 149 1e-42
gb|EOY19522.1| Global transcription factor group B1 isoform 2 [T... 149 1e-42
ref|XP_002307949.2| hypothetical protein POPTR_0006s03040g [Popu... 147 3e-42
ref|XP_002524548.1| suppressor of ty, putative [Ricinus communis... 147 4e-41
>ref|XP_002278416.2| PREDICTED: transcription elongation factor SPT6-like [Vitis
vinifera]
Length = 1660
Score = 158 bits (400), Expect(2) = 2e-47
Identities = 78/107 (72%), Positives = 91/107 (85%), Gaps = 1/107 (0%)
Frame = +3
Query: 3 NPEEKPKLRWNKVLWVIQDLDKN-LLLQKRKTASESYYNKRYEKESRRIYD*TRLNLNQQ 179
NPE+ PKL+W+KVLW IQDLD+ LLLQKRK+A +SYYN+R+E+ESRRIYD TRL+LNQQ
Sbjct: 385 NPEKTPKLKWHKVLWAIQDLDRKWLLLQKRKSALQSYYNRRFEEESRRIYDETRLSLNQQ 444
Query: 180 LFESITKALKVAESEREVDDIDVKFNLHFPAGVIGVDEGQCMRGPRE 320
LFESI K+LK AESEREVDD D KFNLHFP G +GVDEGQ R R+
Sbjct: 445 LFESIIKSLKAAESEREVDDADSKFNLHFPPGEVGVDEGQYKRPKRK 491
Score = 57.0 bits (136), Expect(2) = 2e-47
Identities = 28/43 (65%), Positives = 33/43 (76%)
Frame = +1
Query: 328 YSICSKAGLWEVASKFG*SSEQFGQ*LSLERMVNSHKFFPPSL 456
YSICSKAGLWEVA+KFG SSEQFG +SLE+M+ K P +
Sbjct: 494 YSICSKAGLWEVANKFGYSSEQFGLQISLEKMLEDAKEPPEEM 536
>emb|CBI32841.3| unnamed protein product [Vitis vinifera]
Length = 1646
Score = 158 bits (400), Expect(2) = 6e-47
Identities = 78/107 (72%), Positives = 91/107 (85%), Gaps = 1/107 (0%)
Frame = +3
Query: 3 NPEEKPKLRWNKVLWVIQDLDKN-LLLQKRKTASESYYNKRYEKESRRIYD*TRLNLNQQ 179
NPE+ PKL+W+KVLW IQDLD+ LLLQKRK+A +SYYN+R+E+ESRRIYD TRL+LNQQ
Sbjct: 386 NPEKTPKLKWHKVLWAIQDLDRKWLLLQKRKSALQSYYNRRFEEESRRIYDETRLSLNQQ 445
Query: 180 LFESITKALKVAESEREVDDIDVKFNLHFPAGVIGVDEGQCMRGPRE 320
LFESI K+LK AESEREVDD D KFNLHFP G +GVDEGQ R R+
Sbjct: 446 LFESIIKSLKAAESEREVDDADSKFNLHFPPGEVGVDEGQYKRPKRK 492
Score = 55.1 bits (131), Expect(2) = 6e-47
Identities = 26/32 (81%), Positives = 29/32 (90%)
Frame = +1
Query: 328 YSICSKAGLWEVASKFG*SSEQFGQ*LSLERM 423
YSICSKAGLWEVA+KFG SSEQFG +SLE+M
Sbjct: 495 YSICSKAGLWEVANKFGYSSEQFGLQISLEKM 526
>ref|XP_006300644.1| hypothetical protein CARUB_v10019652mg [Capsella rubella]
gi|482569354|gb|EOA33542.1| hypothetical protein
CARUB_v10019652mg [Capsella rubella]
Length = 1309
Score = 152 bits (383), Expect(2) = 2e-44
Identities = 74/107 (69%), Positives = 88/107 (82%), Gaps = 1/107 (0%)
Frame = +3
Query: 3 NPEEKPKLRWNKVLWVIQDLDKN-LLLQKRKTASESYYNKRYEKESRRIYD*TRLNLNQQ 179
N ++KP+ +W+KV W+IQDLDK LLL+KRK A YY KRYE+ESRR+YD TRLNLNQ
Sbjct: 20 NQDKKPETKWHKVFWMIQDLDKKWLLLRKRKMALHGYYTKRYEEESRRVYDETRLNLNQY 79
Query: 180 LFESITKALKVAESEREVDDIDVKFNLHFPAGVIGVDEGQCMRGPRE 320
LFES+ K+LKVAE+EREVDD+D KFNLHFPAG IGVDEGQ R R+
Sbjct: 80 LFESVIKSLKVAETEREVDDVDSKFNLHFPAGEIGVDEGQYKRPKRK 126
Score = 53.1 bits (126), Expect(2) = 2e-44
Identities = 25/34 (73%), Positives = 30/34 (88%)
Frame = +1
Query: 328 YSICSKAGLWEVASKFG*SSEQFGQ*LSLERMVN 429
YSICSKAGLWEVA+KFG S+EQ G LSLE++V+
Sbjct: 129 YSICSKAGLWEVANKFGYSAEQLGLALSLEKLVD 162
>ref|XP_004309652.1| PREDICTED: transcription elongation factor SPT6-like [Fragaria
vesca subsp. vesca]
Length = 1620
Score = 147 bits (371), Expect(2) = 5e-44
Identities = 75/107 (70%), Positives = 87/107 (81%), Gaps = 1/107 (0%)
Frame = +3
Query: 9 EEKPKLRWNKVLWVIQDLDKN-LLLQKRKTASESYYNKRYEKESRRIYD*TRLNLNQQLF 185
E+ L+W+KVLW IQDL + LLLQKRK+A +SYY KR+++ESRRIYD TRL LNQQLF
Sbjct: 370 EKASTLKWHKVLWSIQDLHRKWLLLQKRKSALQSYYEKRFDEESRRIYDETRLTLNQQLF 429
Query: 186 ESITKALKVAESEREVDDIDVKFNLHFPAGVIGVDEGQCMRGPREYL 326
ESI K+LK AESEREVDD+D KFNLHFPAG IGVDEGQ R R+ L
Sbjct: 430 ESIMKSLKAAESEREVDDVDTKFNLHFPAGEIGVDEGQYKRPKRKSL 476
Score = 56.6 bits (135), Expect(2) = 5e-44
Identities = 29/43 (67%), Positives = 31/43 (72%)
Frame = +1
Query: 328 YSICSKAGLWEVASKFG*SSEQFGQ*LSLERMVNSHKFFPPSL 456
YS CSKAGLWEVASKFG +SEQFG LSLE M+ K P L
Sbjct: 477 YSTCSKAGLWEVASKFGYTSEQFGLQLSLEEMLEDAKETPEEL 519
>gb|EMJ05505.1| hypothetical protein PRUPE_ppa000164mg [Prunus persica]
Length = 1553
Score = 148 bits (373), Expect(2) = 5e-44
Identities = 74/102 (72%), Positives = 85/102 (83%), Gaps = 1/102 (0%)
Frame = +3
Query: 24 LRWNKVLWVIQDLDKN-LLLQKRKTASESYYNKRYEKESRRIYD*TRLNLNQQLFESITK 200
L+W+KVLW I++LD+ LLLQKRK A +SYYNKR+E+ESRRIYD TRLNLNQQLFESI K
Sbjct: 307 LKWHKVLWTIKELDRKWLLLQKRKNALQSYYNKRFEEESRRIYDETRLNLNQQLFESIMK 366
Query: 201 ALKVAESEREVDDIDVKFNLHFPAGVIGVDEGQCMRGPREYL 326
+LK AESEREVDD+D KFNLHFP G GVDEGQ R R+ L
Sbjct: 367 SLKAAESEREVDDVDTKFNLHFPPGEAGVDEGQYKRPKRKSL 408
Score = 55.8 bits (133), Expect(2) = 5e-44
Identities = 27/32 (84%), Positives = 29/32 (90%)
Frame = +1
Query: 328 YSICSKAGLWEVASKFG*SSEQFGQ*LSLERM 423
YSICSKAGLWEVAS+FG SSEQFG LSLE+M
Sbjct: 409 YSICSKAGLWEVASRFGYSSEQFGLQLSLEKM 440
>ref|XP_006391558.1| hypothetical protein EUTSA_v10018001mg [Eutrema salsugineum]
gi|557087992|gb|ESQ28844.1| hypothetical protein
EUTSA_v10018001mg [Eutrema salsugineum]
Length = 1658
Score = 149 bits (377), Expect(2) = 1e-43
Identities = 73/107 (68%), Positives = 88/107 (82%), Gaps = 1/107 (0%)
Frame = +3
Query: 3 NPEEKPKLRWNKVLWVIQDLDKN-LLLQKRKTASESYYNKRYEKESRRIYD*TRLNLNQQ 179
N E+KP+ +W+KV W+IQDLD+ LLL+KRK A YY KR+E+ESRR+YD TRLNLNQ
Sbjct: 365 NIEKKPETKWHKVFWMIQDLDRKWLLLRKRKMALHGYYTKRFEEESRRVYDETRLNLNQY 424
Query: 180 LFESITKALKVAESEREVDDIDVKFNLHFPAGVIGVDEGQCMRGPRE 320
LFESI K+LKVAE+EREVDD+D KFNLHFPAG IG+DEGQ R R+
Sbjct: 425 LFESIIKSLKVAETEREVDDVDSKFNLHFPAGEIGIDEGQFKRPKRK 471
Score = 53.1 bits (126), Expect(2) = 1e-43
Identities = 25/34 (73%), Positives = 30/34 (88%)
Frame = +1
Query: 328 YSICSKAGLWEVASKFG*SSEQFGQ*LSLERMVN 429
YSICSKAGLWEVA+KFG S+EQ G LSLE++V+
Sbjct: 474 YSICSKAGLWEVANKFGYSAEQLGLALSLEKLVD 507
>ref|XP_002322597.2| hypothetical protein POPTR_0016s02900g [Populus trichocarpa]
gi|550320692|gb|EEF04358.2| hypothetical protein
POPTR_0016s02900g [Populus trichocarpa]
Length = 1692
Score = 151 bits (381), Expect(2) = 1e-43
Identities = 74/104 (71%), Positives = 85/104 (81%), Gaps = 1/104 (0%)
Frame = +3
Query: 9 EEKPKLRWNKVLWVIQDLDKN-LLLQKRKTASESYYNKRYEKESRRIYD*TRLNLNQQLF 185
++ P +W+KVLW IQDLD+ LLLQKRK+A SYYNKR+E+ESRRIYD TRLNLNQQLF
Sbjct: 376 DKNPTFKWHKVLWAIQDLDRKWLLLQKRKSALNSYYNKRFEEESRRIYDETRLNLNQQLF 435
Query: 186 ESITKALKVAESEREVDDIDVKFNLHFPAGVIGVDEGQCMRGPR 317
ESI K+LK AESEREVDD+D KFNLHFP G +G DEGQ R R
Sbjct: 436 ESILKSLKTAESEREVDDVDAKFNLHFPPGEVGADEGQYKRPMR 479
Score = 51.2 bits (121), Expect(2) = 1e-43
Identities = 25/32 (78%), Positives = 27/32 (84%)
Frame = +1
Query: 328 YSICSKAGLWEVASKFG*SSEQFGQ*LSLERM 423
YSICSKAGLWEVASKFG S+EQ G LSL +M
Sbjct: 483 YSICSKAGLWEVASKFGYSAEQLGMQLSLLKM 514
>ref|XP_006339248.1| PREDICTED: transcription elongation factor SPT6-like isoform X1
[Solanum tuberosum]
Length = 1643
Score = 149 bits (376), Expect(2) = 2e-43
Identities = 72/107 (67%), Positives = 88/107 (82%), Gaps = 1/107 (0%)
Frame = +3
Query: 3 NPEEKPKLRWNKVLWVIQDLDKN-LLLQKRKTASESYYNKRYEKESRRIYD*TRLNLNQQ 179
N ++KP +RW+KVLW IQDLD+ LLLQKRK+A E YY KR+++ESRR+YD TRL LNQQ
Sbjct: 404 NSDKKPAVRWHKVLWAIQDLDRKWLLLQKRKSALELYYKKRFQEESRRVYDETRLKLNQQ 463
Query: 180 LFESITKALKVAESEREVDDIDVKFNLHFPAGVIGVDEGQCMRGPRE 320
LFESIT +L+ +ESEREVDD+D KFNLHFP G +GVDEGQ R R+
Sbjct: 464 LFESITNSLQASESEREVDDVDSKFNLHFPPGEVGVDEGQYKRPKRK 510
Score = 52.8 bits (125), Expect(2) = 2e-43
Identities = 24/32 (75%), Positives = 29/32 (90%)
Frame = +1
Query: 328 YSICSKAGLWEVASKFG*SSEQFGQ*LSLERM 423
YSICSK+GLWEVASK G S+EQFG+ +SLE+M
Sbjct: 513 YSICSKSGLWEVASKLGYSAEQFGRHMSLEKM 544
>ref|XP_006339249.1| PREDICTED: transcription elongation factor SPT6-like isoform X2
[Solanum tuberosum]
Length = 1642
Score = 149 bits (376), Expect(2) = 2e-43
Identities = 72/107 (67%), Positives = 88/107 (82%), Gaps = 1/107 (0%)
Frame = +3
Query: 3 NPEEKPKLRWNKVLWVIQDLDKN-LLLQKRKTASESYYNKRYEKESRRIYD*TRLNLNQQ 179
N ++KP +RW+KVLW IQDLD+ LLLQKRK+A E YY KR+++ESRR+YD TRL LNQQ
Sbjct: 403 NSDKKPAVRWHKVLWAIQDLDRKWLLLQKRKSALELYYKKRFQEESRRVYDETRLKLNQQ 462
Query: 180 LFESITKALKVAESEREVDDIDVKFNLHFPAGVIGVDEGQCMRGPRE 320
LFESIT +L+ +ESEREVDD+D KFNLHFP G +GVDEGQ R R+
Sbjct: 463 LFESITNSLQASESEREVDDVDSKFNLHFPPGEVGVDEGQYKRPKRK 509
Score = 52.8 bits (125), Expect(2) = 2e-43
Identities = 24/32 (75%), Positives = 29/32 (90%)
Frame = +1
Query: 328 YSICSKAGLWEVASKFG*SSEQFGQ*LSLERM 423
YSICSK+GLWEVASK G S+EQFG+ +SLE+M
Sbjct: 512 YSICSKSGLWEVASKLGYSAEQFGRHMSLEKM 543
>ref|XP_006482016.1| PREDICTED: transcription elongation factor SPT6-like [Citrus
sinensis]
Length = 1623
Score = 147 bits (372), Expect(2) = 5e-43
Identities = 72/104 (69%), Positives = 86/104 (82%), Gaps = 1/104 (0%)
Frame = +3
Query: 9 EEKPKLRWNKVLWVIQDLDKN-LLLQKRKTASESYYNKRYEKESRRIYD*TRLNLNQQLF 185
E P ++W+KVLW I DLDK LLLQKRK+A +SYY KRYE+ESRRIYD TRL LNQQLF
Sbjct: 389 ERTPTMKWHKVLWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLF 448
Query: 186 ESITKALKVAESEREVDDIDVKFNLHFPAGVIGVDEGQCMRGPR 317
+SI+K+L+ AE+EREVDD+D+KFNLHFP G +GVDEGQ R R
Sbjct: 449 DSISKSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKR 492
Score = 52.8 bits (125), Expect(2) = 5e-43
Identities = 26/37 (70%), Positives = 29/37 (78%)
Frame = +1
Query: 313 QENISYSICSKAGLWEVASKFG*SSEQFGQ*LSLERM 423
+ + YS CSKAGLWEVASKFG SSEQ G LSLE+M
Sbjct: 491 KRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKM 527
>ref|XP_006430480.1| hypothetical protein CICLE_v10013566mg, partial [Citrus clementina]
gi|557532537|gb|ESR43720.1| hypothetical protein
CICLE_v10013566mg, partial [Citrus clementina]
Length = 1592
Score = 147 bits (372), Expect(2) = 5e-43
Identities = 72/104 (69%), Positives = 86/104 (82%), Gaps = 1/104 (0%)
Frame = +3
Query: 9 EEKPKLRWNKVLWVIQDLDKN-LLLQKRKTASESYYNKRYEKESRRIYD*TRLNLNQQLF 185
E P ++W+KVLW I DLDK LLLQKRK+A +SYY KRYE+ESRRIYD TRL LNQQLF
Sbjct: 378 ERTPTMKWHKVLWAIHDLDKKWLLLQKRKSALQSYYKKRYEEESRRIYDETRLALNQQLF 437
Query: 186 ESITKALKVAESEREVDDIDVKFNLHFPAGVIGVDEGQCMRGPR 317
+SI+K+L+ AE+EREVDD+D+KFNLHFP G +GVDEGQ R R
Sbjct: 438 DSISKSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPKR 481
Score = 52.8 bits (125), Expect(2) = 5e-43
Identities = 26/37 (70%), Positives = 29/37 (78%)
Frame = +1
Query: 313 QENISYSICSKAGLWEVASKFG*SSEQFGQ*LSLERM 423
+ + YS CSKAGLWEVASKFG SSEQ G LSLE+M
Sbjct: 480 KRSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKM 516
>ref|XP_004249330.1| PREDICTED: transcription elongation factor SPT6-like [Solanum
lycopersicum]
Length = 1642
Score = 147 bits (371), Expect(2) = 6e-43
Identities = 71/107 (66%), Positives = 87/107 (81%), Gaps = 1/107 (0%)
Frame = +3
Query: 3 NPEEKPKLRWNKVLWVIQDLDKNL-LLQKRKTASESYYNKRYEKESRRIYD*TRLNLNQQ 179
N ++KP +RW+KVLW IQDLD+ LLQKRK+A E YY KR+++ESRR+YD TRL LNQQ
Sbjct: 400 NSDKKPSVRWHKVLWAIQDLDRKWRLLQKRKSALELYYKKRFQEESRRVYDETRLKLNQQ 459
Query: 180 LFESITKALKVAESEREVDDIDVKFNLHFPAGVIGVDEGQCMRGPRE 320
LFESIT +L+ +ESEREVDD+D KFNLHFP G +GVDEGQ R R+
Sbjct: 460 LFESITNSLQASESEREVDDVDSKFNLHFPPGEVGVDEGQYKRPKRK 506
Score = 52.8 bits (125), Expect(2) = 6e-43
Identities = 24/32 (75%), Positives = 29/32 (90%)
Frame = +1
Query: 328 YSICSKAGLWEVASKFG*SSEQFGQ*LSLERM 423
YSICSK+GLWEVASK G S+EQFG+ +SLE+M
Sbjct: 509 YSICSKSGLWEVASKLGYSAEQFGRHMSLEKM 540
>gb|AAC27151.1| Similar to gb|U46691 putative chromatin structure regulator
(SUPT6H) from Homo sapiens. ESTs gb|T42908, gb|AA586170
and gb|AA395125 come from this gene [Arabidopsis
thaliana]
Length = 1684
Score = 146 bits (369), Expect(2) = 8e-43
Identities = 72/107 (67%), Positives = 85/107 (79%), Gaps = 1/107 (0%)
Frame = +3
Query: 3 NPEEKPKLRWNKVLWVIQDLDKN-LLLQKRKTASESYYNKRYEKESRRIYD*TRLNLNQQ 179
N +KP+ +W+KV W+I DLDK LLL+KRK A YY KRYE+ESRR+YD TRLNLNQ
Sbjct: 420 NQGKKPETKWHKVFWMIHDLDKKWLLLRKRKMALHGYYTKRYEEESRRVYDETRLNLNQY 479
Query: 180 LFESITKALKVAESEREVDDIDVKFNLHFPAGVIGVDEGQCMRGPRE 320
LFES+ K+LKVAE+EREVDD+D KFNLHFP G IGVDEGQ R R+
Sbjct: 480 LFESVIKSLKVAETEREVDDVDSKFNLHFPPGEIGVDEGQYKRPKRK 526
Score = 53.1 bits (126), Expect(2) = 8e-43
Identities = 25/34 (73%), Positives = 30/34 (88%)
Frame = +1
Query: 328 YSICSKAGLWEVASKFG*SSEQFGQ*LSLERMVN 429
YSICSKAGLWEVA+KFG S+EQ G LSLE++V+
Sbjct: 529 YSICSKAGLWEVANKFGYSAEQLGLALSLEKLVD 562
>ref|NP_176723.3| transcription elongation factor SPT6-like protein [Arabidopsis
thaliana] gi|332196252|gb|AEE34373.1| transcription
elongation factor SPT6-like protein [Arabidopsis
thaliana]
Length = 1647
Score = 146 bits (369), Expect(2) = 8e-43
Identities = 72/107 (67%), Positives = 85/107 (79%), Gaps = 1/107 (0%)
Frame = +3
Query: 3 NPEEKPKLRWNKVLWVIQDLDKN-LLLQKRKTASESYYNKRYEKESRRIYD*TRLNLNQQ 179
N +KP+ +W+KV W+I DLDK LLL+KRK A YY KRYE+ESRR+YD TRLNLNQ
Sbjct: 364 NQGKKPETKWHKVFWMIHDLDKKWLLLRKRKMALHGYYTKRYEEESRRVYDETRLNLNQY 423
Query: 180 LFESITKALKVAESEREVDDIDVKFNLHFPAGVIGVDEGQCMRGPRE 320
LFES+ K+LKVAE+EREVDD+D KFNLHFP G IGVDEGQ R R+
Sbjct: 424 LFESVIKSLKVAETEREVDDVDSKFNLHFPPGEIGVDEGQYKRPKRK 470
Score = 53.1 bits (126), Expect(2) = 8e-43
Identities = 25/34 (73%), Positives = 30/34 (88%)
Frame = +1
Query: 328 YSICSKAGLWEVASKFG*SSEQFGQ*LSLERMVN 429
YSICSKAGLWEVA+KFG S+EQ G LSLE++V+
Sbjct: 473 YSICSKAGLWEVANKFGYSAEQLGLALSLEKLVD 506
>ref|NP_001077775.1| transcription elongation factor SPT6-like protein [Arabidopsis
thaliana] gi|332196253|gb|AEE34374.1| transcription
elongation factor SPT6-like protein [Arabidopsis
thaliana]
Length = 1642
Score = 146 bits (369), Expect(2) = 8e-43
Identities = 72/107 (67%), Positives = 85/107 (79%), Gaps = 1/107 (0%)
Frame = +3
Query: 3 NPEEKPKLRWNKVLWVIQDLDKN-LLLQKRKTASESYYNKRYEKESRRIYD*TRLNLNQQ 179
N +KP+ +W+KV W+I DLDK LLL+KRK A YY KRYE+ESRR+YD TRLNLNQ
Sbjct: 364 NQGKKPETKWHKVFWMIHDLDKKWLLLRKRKMALHGYYTKRYEEESRRVYDETRLNLNQY 423
Query: 180 LFESITKALKVAESEREVDDIDVKFNLHFPAGVIGVDEGQCMRGPRE 320
LFES+ K+LKVAE+EREVDD+D KFNLHFP G IGVDEGQ R R+
Sbjct: 424 LFESVIKSLKVAETEREVDDVDSKFNLHFPPGEIGVDEGQYKRPKRK 470
Score = 53.1 bits (126), Expect(2) = 8e-43
Identities = 25/34 (73%), Positives = 30/34 (88%)
Frame = +1
Query: 328 YSICSKAGLWEVASKFG*SSEQFGQ*LSLERMVN 429
YSICSKAGLWEVA+KFG S+EQ G LSLE++V+
Sbjct: 473 YSICSKAGLWEVANKFGYSAEQLGLALSLEKLVD 506
>ref|NP_001185317.1| transcription elongation factor SPT6-like protein [Arabidopsis
thaliana] gi|332196254|gb|AEE34375.1| transcription
elongation factor SPT6-like protein [Arabidopsis
thaliana]
Length = 1454
Score = 146 bits (369), Expect(2) = 8e-43
Identities = 72/107 (67%), Positives = 85/107 (79%), Gaps = 1/107 (0%)
Frame = +3
Query: 3 NPEEKPKLRWNKVLWVIQDLDKN-LLLQKRKTASESYYNKRYEKESRRIYD*TRLNLNQQ 179
N +KP+ +W+KV W+I DLDK LLL+KRK A YY KRYE+ESRR+YD TRLNLNQ
Sbjct: 335 NQGKKPETKWHKVFWMIHDLDKKWLLLRKRKMALHGYYTKRYEEESRRVYDETRLNLNQY 394
Query: 180 LFESITKALKVAESEREVDDIDVKFNLHFPAGVIGVDEGQCMRGPRE 320
LFES+ K+LKVAE+EREVDD+D KFNLHFP G IGVDEGQ R R+
Sbjct: 395 LFESVIKSLKVAETEREVDDVDSKFNLHFPPGEIGVDEGQYKRPKRK 441
Score = 53.1 bits (126), Expect(2) = 8e-43
Identities = 25/34 (73%), Positives = 30/34 (88%)
Frame = +1
Query: 328 YSICSKAGLWEVASKFG*SSEQFGQ*LSLERMVN 429
YSICSKAGLWEVA+KFG S+EQ G LSLE++V+
Sbjct: 444 YSICSKAGLWEVANKFGYSAEQLGLALSLEKLVD 477
>gb|EOY19521.1| Global transcription factor group B1 isoform 1 [Theobroma cacao]
Length = 1617
Score = 149 bits (375), Expect(2) = 1e-42
Identities = 72/104 (69%), Positives = 87/104 (83%), Gaps = 1/104 (0%)
Frame = +3
Query: 9 EEKPKLRWNKVLWVIQDLDKN-LLLQKRKTASESYYNKRYEKESRRIYD*TRLNLNQQLF 185
E+ P ++W++VLW IQDLD+ LLLQKRKT +S+Y+KR+E+ESRR+YD TRLNLNQQLF
Sbjct: 378 EKTPTIKWHRVLWAIQDLDRKWLLLQKRKTGLQSHYSKRFEEESRRVYDETRLNLNQQLF 437
Query: 186 ESITKALKVAESEREVDDIDVKFNLHFPAGVIGVDEGQCMRGPR 317
ESI KALK A+SEREVDD+D KFNLHFP G +GVDEGQ R R
Sbjct: 438 ESILKALKDADSEREVDDVDAKFNLHFPPGEVGVDEGQYKRPKR 481
Score = 50.4 bits (119), Expect(2) = 1e-42
Identities = 24/32 (75%), Positives = 27/32 (84%)
Frame = +1
Query: 328 YSICSKAGLWEVASKFG*SSEQFGQ*LSLERM 423
YSIC+KAGLW VASKFG S+EQ G LSLE+M
Sbjct: 485 YSICNKAGLWMVASKFGYSAEQLGSQLSLEKM 516
>gb|EOY19522.1| Global transcription factor group B1 isoform 2 [Theobroma cacao]
Length = 1382
Score = 149 bits (375), Expect(2) = 1e-42
Identities = 72/104 (69%), Positives = 87/104 (83%), Gaps = 1/104 (0%)
Frame = +3
Query: 9 EEKPKLRWNKVLWVIQDLDKN-LLLQKRKTASESYYNKRYEKESRRIYD*TRLNLNQQLF 185
E+ P ++W++VLW IQDLD+ LLLQKRKT +S+Y+KR+E+ESRR+YD TRLNLNQQLF
Sbjct: 202 EKTPTIKWHRVLWAIQDLDRKWLLLQKRKTGLQSHYSKRFEEESRRVYDETRLNLNQQLF 261
Query: 186 ESITKALKVAESEREVDDIDVKFNLHFPAGVIGVDEGQCMRGPR 317
ESI KALK A+SEREVDD+D KFNLHFP G +GVDEGQ R R
Sbjct: 262 ESILKALKDADSEREVDDVDAKFNLHFPPGEVGVDEGQYKRPKR 305
Score = 50.4 bits (119), Expect(2) = 1e-42
Identities = 24/32 (75%), Positives = 27/32 (84%)
Frame = +1
Query: 328 YSICSKAGLWEVASKFG*SSEQFGQ*LSLERM 423
YSIC+KAGLW VASKFG S+EQ G LSLE+M
Sbjct: 309 YSICNKAGLWMVASKFGYSAEQLGSQLSLEKM 340
>ref|XP_002307949.2| hypothetical protein POPTR_0006s03040g [Populus trichocarpa]
gi|550335341|gb|EEE91472.2| hypothetical protein
POPTR_0006s03040g [Populus trichocarpa]
Length = 1487
Score = 147 bits (370), Expect(2) = 3e-42
Identities = 73/101 (72%), Positives = 83/101 (82%), Gaps = 1/101 (0%)
Frame = +3
Query: 18 PKLRWNKVLWVIQDLDKN-LLLQKRKTASESYYNKRYEKESRRIYD*TRLNLNQQLFESI 194
P +W+KVLW IQDLD+ LLLQKRK+A +YYNKR+E+ESRRIYD TRLNLNQQLFESI
Sbjct: 380 PTFKWHKVLWAIQDLDRKWLLLQKRKSALNAYYNKRFEEESRRIYDETRLNLNQQLFESI 439
Query: 195 TKALKVAESEREVDDIDVKFNLHFPAGVIGVDEGQCMRGPR 317
K+LK AESEREVDD+D KFNLHFP G + VDEGQ R R
Sbjct: 440 LKSLKTAESEREVDDVDAKFNLHFPPGEVVVDEGQYKRPMR 480
Score = 50.8 bits (120), Expect(2) = 3e-42
Identities = 24/32 (75%), Positives = 27/32 (84%)
Frame = +1
Query: 328 YSICSKAGLWEVASKFG*SSEQFGQ*LSLERM 423
YS+CSKAGLWEVASKFG S+EQ G LSL +M
Sbjct: 484 YSVCSKAGLWEVASKFGYSAEQLGMQLSLLKM 515
>ref|XP_002524548.1| suppressor of ty, putative [Ricinus communis]
gi|223536178|gb|EEF37832.1| suppressor of ty, putative
[Ricinus communis]
Length = 1650
Score = 147 bits (371), Expect(2) = 4e-41
Identities = 73/105 (69%), Positives = 85/105 (80%), Gaps = 1/105 (0%)
Frame = +3
Query: 9 EEKPKLRWNKVLWVIQDLDKN-LLLQKRKTASESYYNKRYEKESRRIYD*TRLNLNQQLF 185
+ KP L+W+KVLW IQDLD+ LLLQKRK A YYNKR+E+ESRRIYD TRLNLNQQLF
Sbjct: 388 DRKPILKWHKVLWAIQDLDRKWLLLQKRKNALNLYYNKRFEEESRRIYDETRLNLNQQLF 447
Query: 186 ESITKALKVAESEREVDDIDVKFNLHFPAGVIGVDEGQCMRGPRE 320
+SI K+L+ AESEREVDD+D KFNLHFP G +GVD GQ R R+
Sbjct: 448 KSILKSLEAAESEREVDDVDAKFNLHFPPGEVGVDVGQYKRPKRK 492
Score = 46.6 bits (109), Expect(2) = 4e-41
Identities = 22/29 (75%), Positives = 24/29 (82%)
Frame = +1
Query: 328 YSICSKAGLWEVASKFG*SSEQFGQ*LSL 414
YSICSKAGLWEVA+KFG S+EQ G L L
Sbjct: 495 YSICSKAGLWEVANKFGFSAEQLGMALHL 523