BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00015506
         (418 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525999.1| pentatricopeptide repeat-containing protein,...    84   3e-14
gb|EXB32333.1| hypothetical protein L484_005539 [Morus notabilis]      81   1e-13
gb|EOY01105.1| Pentatricopeptide repeat-containing protein, puta...    71   2e-10
gb|EOY01104.1| Tetratricopeptide repeat (TPR)-like superfamily p...    69   8e-10
ref|XP_006828472.1| hypothetical protein AMTR_s00060p00144370 [A...    63   4e-08
ref|NP_178283.1| pentatricopeptide repeat-containing protein [Ar...    63   4e-08
ref|XP_006395856.1| hypothetical protein EUTSA_v10003932mg [Eutr...    62   1e-07
ref|XP_006293026.1| hypothetical protein CARUB_v10019306mg [Caps...    60   2e-07
ref|XP_002876773.1| pentatricopeptide repeat-containing protein ...    60   3e-07
ref|XP_006579638.1| PREDICTED: pentatricopeptide repeat-containi...    57   3e-06
ref|XP_004142302.1| PREDICTED: pentatricopeptide repeat-containi...    57   3e-06
gb|ESW11537.1| hypothetical protein PHAVU_008G038900g [Phaseolus...    57   3e-06

>ref|XP_002525999.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223534731|gb|EEF36423.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 557

 Score = 83.6 bits (205), Expect = 3e-14
 Identities = 39/54 (72%), Positives = 45/54 (83%)
 Frame = -3

Query: 416 KGYMIEAQHVFDDMLKQGITPDGAVYSILIRGYAKEDNTVAISHLHEEMTKRGL 255
           KG MIEA+ +FDDMLK+GI PD  V+ ILIRGY K+DN VAISHLHEEM +RGL
Sbjct: 399 KGLMIEAKQLFDDMLKRGIIPDSMVFDILIRGYLKQDNPVAISHLHEEMRRRGL 452


>gb|EXB32333.1| hypothetical protein L484_005539 [Morus notabilis]
          Length = 548

 Score = 81.3 bits (199), Expect = 1e-13
 Identities = 37/54 (68%), Positives = 45/54 (83%)
 Frame = -3

Query: 416 KGYMIEAQHVFDDMLKQGITPDGAVYSILIRGYAKEDNTVAISHLHEEMTKRGL 255
           KG M+EA+ VFDDMLK+GI+PD AVY ILIRGY KE N VA+S +H+EM KRG+
Sbjct: 483 KGLMVEAKQVFDDMLKRGISPDSAVYDILIRGYLKEGNEVAVSGMHDEMRKRGI 536


>gb|EOY01105.1| Pentatricopeptide repeat-containing protein, putative isoform 2
           [Theobroma cacao] gi|508709209|gb|EOY01106.1|
           Pentatricopeptide repeat-containing protein, putative
           isoform 2 [Theobroma cacao]
          Length = 468

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 33/53 (62%), Positives = 41/53 (77%)
 Frame = -3

Query: 416 KGYMIEAQHVFDDMLKQGITPDGAVYSILIRGYAKEDNTVAISHLHEEMTKRG 258
           KG MIEA+ +F DMLK+ ITPD AVY I+IRGY +++N  A+S L EEM KRG
Sbjct: 402 KGLMIEAKQIFQDMLKRKITPDAAVYDIMIRGYLQQNNEAAVSELLEEMRKRG 454


>gb|EOY01104.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
           isoform 1 [Theobroma cacao]
          Length = 597

 Score = 68.6 bits (166), Expect = 8e-10
 Identities = 32/52 (61%), Positives = 40/52 (76%)
 Frame = -3

Query: 416 KGYMIEAQHVFDDMLKQGITPDGAVYSILIRGYAKEDNTVAISHLHEEMTKR 261
           KG MIEA+ +F DMLK+ ITPD AVY I+IRGY +++N  A+S L EEM KR
Sbjct: 520 KGLMIEAKQIFQDMLKRKITPDAAVYDIMIRGYLQQNNEAAVSELLEEMRKR 571


>ref|XP_006828472.1| hypothetical protein AMTR_s00060p00144370 [Amborella trichopoda]
           gi|548833220|gb|ERM95888.1| hypothetical protein
           AMTR_s00060p00144370 [Amborella trichopoda]
          Length = 548

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 30/54 (55%), Positives = 40/54 (74%)
 Frame = -3

Query: 416 KGYMIEAQHVFDDMLKQGITPDGAVYSILIRGYAKEDNTVAISHLHEEMTKRGL 255
           KG+MIEA+ VF+DML +GI PD AVY +LIRGY K++N      L ++M +RGL
Sbjct: 485 KGFMIEAELVFNDMLCRGIEPDFAVYDVLIRGYLKQNNMSEAIRLQDDMKERGL 538


>ref|NP_178283.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75216739|sp|Q9ZUA2.1|PP141_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g01740 gi|4220475|gb|AAD12698.1| hypothetical protein
           [Arabidopsis thaliana] gi|330250397|gb|AEC05491.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 559

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 30/54 (55%), Positives = 38/54 (70%)
 Frame = -3

Query: 416 KGYMIEAQHVFDDMLKQGITPDGAVYSILIRGYAKEDNTVAISHLHEEMTKRGL 255
           KG M+EA+ VFD+ML  GI+PD AV+ +LIR Y KE N  A S L  +M +RGL
Sbjct: 486 KGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQRRGL 539


>ref|XP_006395856.1| hypothetical protein EUTSA_v10003932mg [Eutrema salsugineum]
           gi|557092495|gb|ESQ33142.1| hypothetical protein
           EUTSA_v10003932mg [Eutrema salsugineum]
          Length = 559

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 29/54 (53%), Positives = 37/54 (68%)
 Frame = -3

Query: 416 KGYMIEAQHVFDDMLKQGITPDGAVYSILIRGYAKEDNTVAISHLHEEMTKRGL 255
           KG M+EA+ VFD+ML+ G +PD AV+ +LIR Y KE N  A S L  +M  RGL
Sbjct: 486 KGLMVEARQVFDEMLRSGTSPDSAVFDLLIRAYEKEGNMTAASDLFLDMQTRGL 539


>ref|XP_006293026.1| hypothetical protein CARUB_v10019306mg [Capsella rubella]
           gi|482561733|gb|EOA25924.1| hypothetical protein
           CARUB_v10019306mg [Capsella rubella]
          Length = 645

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 30/54 (55%), Positives = 37/54 (68%)
 Frame = -3

Query: 416 KGYMIEAQHVFDDMLKQGITPDGAVYSILIRGYAKEDNTVAISHLHEEMTKRGL 255
           KG M+EA+ VFD+ML+ GI PD AV+ +LIR Y KE N  A S L  +M  RGL
Sbjct: 458 KGLMVEARQVFDEMLRSGICPDLAVFDLLIRAYKKEGNMTAASDLLLDMQTRGL 511


>ref|XP_002876773.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297322611|gb|EFH53032.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 559

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 28/54 (51%), Positives = 36/54 (66%)
 Frame = -3

Query: 416 KGYMIEAQHVFDDMLKQGITPDGAVYSILIRGYAKEDNTVAISHLHEEMTKRGL 255
           KG M+EA+ VFD+ML+ G+ PD AV+ +LIR Y KE N    S L  +M  RGL
Sbjct: 486 KGLMVEARQVFDEMLRSGVCPDSAVFDLLIRAYEKEGNMTTASDLLLDMQTRGL 539


>ref|XP_006579638.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
           mitochondrial-like [Glycine max]
          Length = 801

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 35/99 (35%), Positives = 48/99 (48%)
 Frame = -3

Query: 401 EAQHVFDDMLKQGITPDGAVYSILIRGYAKEDNTVAISHLHEEMTKRGLHQKEMLDQKCM 222
           EAQ VFDDM +QG+ PD  VYS LI GY K  N +    LH+EM  RG      +   C+
Sbjct: 300 EAQGVFDDMERQGVVPDVYVYSSLIHGYCKSHNLLRALALHDEMISRG------VKTNCV 353

Query: 221 IYKKLIMV*L*SALPQLNMCFKYFIQIKRFLWEVLFLSG 105
           +   ++       L ++ M  +   Q K      +FL G
Sbjct: 354 VVSCIL-----HCLGEMGMTLEVVDQFKELKESGMFLDG 387


>ref|XP_004142302.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g01740-like [Cucumis sativus]
           gi|449521427|ref|XP_004167731.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g01740-like [Cucumis sativus]
          Length = 585

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 28/43 (65%), Positives = 31/43 (72%)
 Frame = -3

Query: 416 KGYMIEAQHVFDDMLKQGITPDGAVYSILIRGYAKEDNTVAIS 288
           KG MIEA+ VFDDML +GITPD   Y ILIRGY  + N  AIS
Sbjct: 484 KGLMIEAKQVFDDMLNKGITPDFVSYDILIRGYHNQGNGAAIS 526


>gb|ESW11537.1| hypothetical protein PHAVU_008G038900g [Phaseolus vulgaris]
          Length = 803

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 36/99 (36%), Positives = 48/99 (48%)
 Frame = -3

Query: 401 EAQHVFDDMLKQGITPDGAVYSILIRGYAKEDNTVAISHLHEEMTKRGLHQKEMLDQKCM 222
           EA+ VFDDM +QG+ PD  VYS LI GY K  N +    LH+EM  RG      L   C+
Sbjct: 303 EARGVFDDMERQGVVPDVFVYSALIHGYCKGHNLLKALDLHDEMISRG------LKSNCV 356

Query: 221 IYKKLIMV*L*SALPQLNMCFKYFIQIKRFLWEVLFLSG 105
           I   ++       L ++ M  +   Q K      +FL G
Sbjct: 357 IVSYIL-----RCLGKIGMPLEVVDQFKELKESGMFLDG 390