BLASTX nr result
ID: Catharanthus22_contig00015277
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00015277
(894 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAG34873.1|AF261020_1 putative chloroplast RNA helicase VDL i... 322 9e-86
ref|XP_004229420.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 321 3e-85
ref|XP_006349223.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 320 6e-85
ref|XP_002315792.2| hypothetical protein POPTR_0010s10230g [Popu... 315 1e-83
ref|XP_002277780.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 315 1e-83
gb|AAG34879.1|AF261024_1 putative chloroplast RNA helicase VDL' ... 314 3e-83
gb|AAG38493.1|AF261032_1 putative chloroplast RNA helicase VDL' ... 314 3e-83
ref|XP_006419853.1| hypothetical protein CICLE_v10004897mg [Citr... 313 7e-83
gb|EXB55009.1| DEAD-box ATP-dependent RNA helicase 58 [Morus not... 311 2e-82
emb|CBI26203.3| unnamed protein product [Vitis vinifera] 311 2e-82
ref|XP_006489326.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 311 3e-82
ref|XP_002517195.1| dead box ATP-dependent RNA helicase, putativ... 308 2e-81
gb|EOY05584.1| P-loop containing nucleoside triphosphate hydrola... 306 9e-81
gb|EOY05583.1| P-loop containing nucleoside triphosphate hydrola... 306 9e-81
gb|EOY05582.1| P-loop containing nucleoside triphosphate hydrola... 306 9e-81
ref|NP_974812.1| DEAD-box ATP-dependent RNA helicase 58 [Arabido... 305 1e-80
gb|EMJ24082.1| hypothetical protein PRUPE_ppa005191mg [Prunus pe... 304 3e-80
ref|XP_004134454.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 303 6e-80
ref|XP_002871872.1| hypothetical protein ARALYDRAFT_488806 [Arab... 303 7e-80
ref|XP_006290141.1| hypothetical protein CARUB_v10003807mg [Caps... 302 1e-79
>gb|AAG34873.1|AF261020_1 putative chloroplast RNA helicase VDL isoform 1 [Nicotiana tabacum]
gi|11385590|gb|AAG34876.1|AF261021_1 putative
chloroplast RNA helicase VDL isoform 1 [Nicotiana
tabacum]
Length = 466
Score = 322 bits (826), Expect = 9e-86
Identities = 173/274 (63%), Positives = 203/274 (74%), Gaps = 9/274 (3%)
Frame = -2
Query: 797 SCFSATHPPFAPW---LNTTSDVFNADRRNWFLVKSTNXXXXXXXXXXXXXXXKTEAGN- 630
+CFSAT W LN TS F + + ++ EA
Sbjct: 2 ACFSATQLHTLLWTSSLNRTSHHFKPN----YTYRTPKFLFRQKPLIASFSTSDVEARTE 57
Query: 629 -RENAISTLRQLCQGHVPEHMICRMEEIGYLFPTNVQMQSLPLLFSGRDCVLQAQTGSGK 453
++++ +TLR+LC GHVPEH+I R+EE+GY+ PT VQ+Q+LP L+SGRDCVL AQTGSGK
Sbjct: 58 TKDSSTATLRELCHGHVPEHVIRRVEEVGYVIPTEVQLQALPFLYSGRDCVLHAQTGSGK 117
Query: 452 TLAYLLQIFSVINTQRSKVQALVVVPTRELGMQVTKVARMLAAK----HESEKSCVVMAL 285
TLAYLLQI SVI++QRS VQAL+VVPTRELGMQVTKVARMLAAK KSC VMAL
Sbjct: 118 TLAYLLQILSVIDSQRSAVQALIVVPTRELGMQVTKVARMLAAKPSELESGPKSCTVMAL 177
Query: 284 LDGGTLRRHKSWLKAEPPTIIVATLGSLCQMLEKQYFRLESLQVLVIDEVDFMFNSSKQA 105
LDGG L RHKSWLKAEPPTI+VAT+GSLCQMLEK +L+S QVLV+DEVDFMFNSSK+
Sbjct: 178 LDGGMLNRHKSWLKAEPPTIVVATMGSLCQMLEKHILKLDSCQVLVVDEVDFMFNSSKEI 237
Query: 104 GALRRLLTSYSSISNRQTIFASASIPQHRRFLYD 3
+L+RLLTSYS+ NRQTIFASASIPQHRRFLYD
Sbjct: 238 SSLKRLLTSYSTSKNRQTIFASASIPQHRRFLYD 271
>ref|XP_004229420.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 58,
chloroplastic-like [Solanum lycopersicum]
Length = 459
Score = 321 bits (822), Expect = 3e-85
Identities = 161/213 (75%), Positives = 187/213 (87%), Gaps = 4/213 (1%)
Frame = -2
Query: 629 RENAISTLRQLCQGHVPEHMICRMEEIGYLFPTNVQMQSLPLLFSGRDCVLQAQTGSGKT 450
++++ +TLR+LC GHV EH+I R EEIGY+ PT VQ+Q+LP LFSGRDCVL AQTGSGKT
Sbjct: 52 KDSSTTTLRELCYGHVQEHVILRAEEIGYVMPTKVQLQALPFLFSGRDCVLHAQTGSGKT 111
Query: 449 LAYLLQIFSVINTQRSKVQALVVVPTRELGMQVTKVARMLAA---KHESE-KSCVVMALL 282
LAYLLQ+ SV+++QRS VQAL+VVPTRELGMQVTKVARMLAA +HES KSC VMALL
Sbjct: 112 LAYLLQVLSVVDSQRSAVQALIVVPTRELGMQVTKVARMLAANPSEHESGLKSCTVMALL 171
Query: 281 DGGTLRRHKSWLKAEPPTIIVATLGSLCQMLEKQYFRLESLQVLVIDEVDFMFNSSKQAG 102
DGG L+RHKSWLKAEPPTI+VAT+GSLCQMLEK +L++ QVLV+DEVDFMFNSSK+
Sbjct: 172 DGGMLKRHKSWLKAEPPTIVVATIGSLCQMLEKHILKLDTCQVLVVDEVDFMFNSSKEVS 231
Query: 101 ALRRLLTSYSSISNRQTIFASASIPQHRRFLYD 3
+L+RLLTSYSS NRQTIFASASIPQHRRFLYD
Sbjct: 232 SLKRLLTSYSSSKNRQTIFASASIPQHRRFLYD 264
>ref|XP_006349223.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 58,
chloroplastic-like [Solanum tuberosum]
Length = 462
Score = 320 bits (819), Expect = 6e-85
Identities = 160/213 (75%), Positives = 187/213 (87%), Gaps = 4/213 (1%)
Frame = -2
Query: 629 RENAISTLRQLCQGHVPEHMICRMEEIGYLFPTNVQMQSLPLLFSGRDCVLQAQTGSGKT 450
++++ +TLR+LC GHV EH+I R EE+GY+ PT VQ+Q+LP LFSGRDCVL AQTGSGKT
Sbjct: 52 KDSSTTTLRELCYGHVQEHVIRRAEEVGYVIPTEVQLQALPFLFSGRDCVLHAQTGSGKT 111
Query: 449 LAYLLQIFSVINTQRSKVQALVVVPTRELGMQVTKVARMLAA---KHESE-KSCVVMALL 282
LAYLLQ+ SV+++QRS VQAL+VVPTRELGMQVTKVARMLAA +HES KSC VMALL
Sbjct: 112 LAYLLQVLSVVDSQRSAVQALIVVPTRELGMQVTKVARMLAANPSEHESGLKSCTVMALL 171
Query: 281 DGGTLRRHKSWLKAEPPTIIVATLGSLCQMLEKQYFRLESLQVLVIDEVDFMFNSSKQAG 102
DGG L+RHKSWLKAEPPTI+VAT+GSLCQMLEK +L++ QVLV+DEVDFMFNSSK+
Sbjct: 172 DGGMLKRHKSWLKAEPPTIVVATIGSLCQMLEKHILKLDTCQVLVVDEVDFMFNSSKEVS 231
Query: 101 ALRRLLTSYSSISNRQTIFASASIPQHRRFLYD 3
+L+RLLTSYSS NRQTIFASASIPQHRRFLYD
Sbjct: 232 SLKRLLTSYSSSKNRQTIFASASIPQHRRFLYD 264
>ref|XP_002315792.2| hypothetical protein POPTR_0010s10230g [Populus trichocarpa]
gi|550329495|gb|EEF01963.2| hypothetical protein
POPTR_0010s10230g [Populus trichocarpa]
Length = 477
Score = 315 bits (808), Expect = 1e-83
Identities = 158/207 (76%), Positives = 180/207 (86%), Gaps = 4/207 (1%)
Frame = -2
Query: 611 TLRQLCQGHVPEHMICRMEEIGYLFPTNVQMQSLPLLFSGRDCVLQAQTGSGKTLAYLLQ 432
TLR++C G VPEH++ R+EE+GY PT+VQ Q+LP+LFSGRDC+L AQTGSGKTLAYLL
Sbjct: 76 TLREICLGRVPEHLLRRVEEVGYAVPTDVQKQALPVLFSGRDCILHAQTGSGKTLAYLLL 135
Query: 431 IFSVINTQRSKVQALVVVPTRELGMQVTKVARMLAA----KHESEKSCVVMALLDGGTLR 264
IFSVINTQRS VQAL+VVPTRELG+QVTKVARMLAA +KSC VMALLDGG LR
Sbjct: 136 IFSVINTQRSAVQALIVVPTRELGIQVTKVARMLAATPTENDAEQKSCTVMALLDGGMLR 195
Query: 263 RHKSWLKAEPPTIIVATLGSLCQMLEKQYFRLESLQVLVIDEVDFMFNSSKQAGALRRLL 84
RHKSWLKAEPPTI+VAT+ SLCQMLEK +LES+QVLVIDEVDFMFNSSKQ +LR+LL
Sbjct: 196 RHKSWLKAEPPTIVVATIASLCQMLEKHLLKLESMQVLVIDEVDFMFNSSKQVSSLRKLL 255
Query: 83 TSYSSISNRQTIFASASIPQHRRFLYD 3
TSYSS ++RQT+FASASIPQH RFLYD
Sbjct: 256 TSYSSCNSRQTVFASASIPQHNRFLYD 282
>ref|XP_002277780.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 58,
chloroplastic-like [Vitis vinifera]
Length = 482
Score = 315 bits (807), Expect = 1e-83
Identities = 158/218 (72%), Positives = 188/218 (86%), Gaps = 4/218 (1%)
Frame = -2
Query: 644 TEAGNRENAISTLRQLCQGHVPEHMICRMEEIGYLFPTNVQMQSLPLLFSGRDCVLQAQT 465
TEA + TLR++CQG VPEH++ R+EE+G++ PT+VQ Q+LP+L SGRDC+L AQT
Sbjct: 66 TEASDIGERTLTLREICQGCVPEHVLRRIEEVGFIVPTDVQQQALPVLLSGRDCILHAQT 125
Query: 464 GSGKTLAYLLQIFSVINTQRSKVQALVVVPTRELGMQVTKVARMLAAK----HESEKSCV 297
GSGKTL YLL IFSV+NT+ S VQAL+VVPTRELG+QVTKVARMLAAK +KSC
Sbjct: 126 GSGKTLTYLLLIFSVVNTKISAVQALIVVPTRELGIQVTKVARMLAAKPMEPELEQKSCT 185
Query: 296 VMALLDGGTLRRHKSWLKAEPPTIIVATLGSLCQMLEKQYFRLESLQVLVIDEVDFMFNS 117
VMALLDGG L+RHKSWLKAEPPTI+VAT+ SLCQMLEKQ F+LES++VLVIDEVDFMFN+
Sbjct: 186 VMALLDGGMLKRHKSWLKAEPPTIVVATVRSLCQMLEKQIFKLESMRVLVIDEVDFMFNA 245
Query: 116 SKQAGALRRLLTSYSSISNRQTIFASASIPQHRRFLYD 3
SKQ G+LR+LLTSYSS +NRQT+FASASIPQHRRFL+D
Sbjct: 246 SKQVGSLRKLLTSYSSTNNRQTVFASASIPQHRRFLHD 283
>gb|AAG34879.1|AF261024_1 putative chloroplast RNA helicase VDL' isoform 1 [Nicotiana
tabacum]
Length = 466
Score = 314 bits (804), Expect = 3e-83
Identities = 157/213 (73%), Positives = 182/213 (85%), Gaps = 4/213 (1%)
Frame = -2
Query: 629 RENAISTLRQLCQGHVPEHMICRMEEIGYLFPTNVQMQSLPLLFSGRDCVLQAQTGSGKT 450
++++ +T R+LC GHVPEH+I R+EE+GY+ PT VQ+ +LP L+SGRDCVL AQTGSGKT
Sbjct: 59 KDSSTATPRELCHGHVPEHVIRRVEEVGYVIPTEVQLLALPFLYSGRDCVLHAQTGSGKT 118
Query: 449 LAYLLQIFSVINTQRSKVQALVVVPTRELGMQVTKVARMLAAK----HESEKSCVVMALL 282
LAYLLQ+ SVI++QRS VQAL+VVPTRELGMQVTKVAR LAAK KSC VMALL
Sbjct: 119 LAYLLQMLSVIDSQRSAVQALIVVPTRELGMQVTKVARTLAAKPSELKSGPKSCTVMALL 178
Query: 281 DGGTLRRHKSWLKAEPPTIIVATLGSLCQMLEKQYFRLESLQVLVIDEVDFMFNSSKQAG 102
DGG L RHKSWLKAEPPTI+VAT+GSLCQMLEK +L+S QVLV+DEVDFMFNSSK+
Sbjct: 179 DGGMLNRHKSWLKAEPPTIVVATMGSLCQMLEKHILKLDSCQVLVVDEVDFMFNSSKEIS 238
Query: 101 ALRRLLTSYSSISNRQTIFASASIPQHRRFLYD 3
+L+RLLTSYSS NRQTIFASASIPQHRRFLYD
Sbjct: 239 SLKRLLTSYSSSKNRQTIFASASIPQHRRFLYD 271
>gb|AAG38493.1|AF261032_1 putative chloroplast RNA helicase VDL' isoform 1 [Nicotiana
tabacum]
Length = 365
Score = 314 bits (804), Expect = 3e-83
Identities = 157/213 (73%), Positives = 182/213 (85%), Gaps = 4/213 (1%)
Frame = -2
Query: 629 RENAISTLRQLCQGHVPEHMICRMEEIGYLFPTNVQMQSLPLLFSGRDCVLQAQTGSGKT 450
++++ +T R+LC GHVPEH+I R+EE+GY+ PT VQ+ +LP L+SGRDCVL AQTGSGKT
Sbjct: 59 KDSSTATPRELCHGHVPEHVIRRVEEVGYVIPTEVQLLALPFLYSGRDCVLHAQTGSGKT 118
Query: 449 LAYLLQIFSVINTQRSKVQALVVVPTRELGMQVTKVARMLAAK----HESEKSCVVMALL 282
LAYLLQ+ SVI++QRS VQAL+VVPTRELGMQVTKVAR LAAK KSC VMALL
Sbjct: 119 LAYLLQMLSVIDSQRSAVQALIVVPTRELGMQVTKVARTLAAKPSELKSGPKSCTVMALL 178
Query: 281 DGGTLRRHKSWLKAEPPTIIVATLGSLCQMLEKQYFRLESLQVLVIDEVDFMFNSSKQAG 102
DGG L RHKSWLKAEPPTI+VAT+GSLCQMLEK +L+S QVLV+DEVDFMFNSSK+
Sbjct: 179 DGGMLNRHKSWLKAEPPTIVVATMGSLCQMLEKHILKLDSCQVLVVDEVDFMFNSSKEIS 238
Query: 101 ALRRLLTSYSSISNRQTIFASASIPQHRRFLYD 3
+L+RLLTSYSS NRQTIFASASIPQHRRFLYD
Sbjct: 239 SLKRLLTSYSSSKNRQTIFASASIPQHRRFLYD 271
>ref|XP_006419853.1| hypothetical protein CICLE_v10004897mg [Citrus clementina]
gi|557521726|gb|ESR33093.1| hypothetical protein
CICLE_v10004897mg [Citrus clementina]
Length = 473
Score = 313 bits (801), Expect = 7e-83
Identities = 154/216 (71%), Positives = 185/216 (85%), Gaps = 4/216 (1%)
Frame = -2
Query: 638 AGNRENAISTLRQLCQGHVPEHMICRMEEIGYLFPTNVQMQSLPLLFSGRDCVLQAQTGS 459
AG N++ TLR+LCQGHVPEH++ RM+E GY+ PT++Q ++LP+LFS RDC+L AQTGS
Sbjct: 60 AGTGNNSL-TLRELCQGHVPEHVLRRMDETGYVLPTDIQREALPVLFSSRDCILHAQTGS 118
Query: 458 GKTLAYLLQIFSVINTQRSKVQALVVVPTRELGMQVTKVARMLAAKHES----EKSCVVM 291
GKTL YLL IFS++N QRS VQA++VVPTRELGMQVTKVAR+LAAK K C VM
Sbjct: 119 GKTLTYLLLIFSLVNAQRSAVQAVIVVPTRELGMQVTKVARVLAAKPSDTDLEHKPCTVM 178
Query: 290 ALLDGGTLRRHKSWLKAEPPTIIVATLGSLCQMLEKQYFRLESLQVLVIDEVDFMFNSSK 111
ALLDGG LRRHKSWLKAEPPTI+VAT+GSLCQ++EK F+LES+QVLVIDEVDF+FNSSK
Sbjct: 179 ALLDGGMLRRHKSWLKAEPPTIVVATMGSLCQLIEKHIFKLESVQVLVIDEVDFLFNSSK 238
Query: 110 QAGALRRLLTSYSSISNRQTIFASASIPQHRRFLYD 3
Q +L++LL SYSS +NRQT+FASASIPQHRRFL+D
Sbjct: 239 QVSSLKKLLASYSSCNNRQTVFASASIPQHRRFLHD 274
>gb|EXB55009.1| DEAD-box ATP-dependent RNA helicase 58 [Morus notabilis]
Length = 464
Score = 311 bits (797), Expect = 2e-82
Identities = 158/212 (74%), Positives = 184/212 (86%), Gaps = 4/212 (1%)
Frame = -2
Query: 626 ENAISTLRQLCQGHVPEHMICRMEEIGYLFPTNVQMQSLPLLFSGRDCVLQAQTGSGKTL 447
E +TLR+LC+G VPEH++ EE+GY+ PT+VQ Q+LP+LFSGRDCVL AQTGSGKTL
Sbjct: 61 EQRAATLRRLCEGLVPEHVV---EEVGYIEPTDVQRQALPILFSGRDCVLHAQTGSGKTL 117
Query: 446 AYLLQIFSVINTQRSKVQALVVVPTRELGMQVTKVARMLAAKHES----EKSCVVMALLD 279
YLL IFSV+NTQRS VQAL+VVPTRELGMQVTKVAR LAAK +KSC VMALLD
Sbjct: 118 TYLLLIFSVVNTQRSAVQALIVVPTRELGMQVTKVARTLAAKPMESDLEQKSCSVMALLD 177
Query: 278 GGTLRRHKSWLKAEPPTIIVATLGSLCQMLEKQYFRLESLQVLVIDEVDFMFNSSKQAGA 99
GGTLRRHKSWLKAEPPT++VAT+GSLCQ L+KQ LES++VLVIDEVDF+FNSSKQ +
Sbjct: 178 GGTLRRHKSWLKAEPPTVVVATIGSLCQQLDKQILTLESMRVLVIDEVDFIFNSSKQVSS 237
Query: 98 LRRLLTSYSSISNRQTIFASASIPQHRRFLYD 3
LR+LLTSYS+ISNRQT+FASASIPQHRRFL++
Sbjct: 238 LRKLLTSYSTISNRQTVFASASIPQHRRFLHE 269
>emb|CBI26203.3| unnamed protein product [Vitis vinifera]
Length = 486
Score = 311 bits (797), Expect = 2e-82
Identities = 159/222 (71%), Positives = 188/222 (84%), Gaps = 8/222 (3%)
Frame = -2
Query: 644 TEAGNRENAISTLRQLCQGHVPEHMIC----RMEEIGYLFPTNVQMQSLPLLFSGRDCVL 477
TEA + TLR++CQG VPEH+I R+EE+G++ PT+VQ Q+LP+L SGRDC+L
Sbjct: 66 TEASDIGERTLTLREICQGCVPEHVIALICFRIEEVGFIVPTDVQQQALPVLLSGRDCIL 125
Query: 476 QAQTGSGKTLAYLLQIFSVINTQRSKVQALVVVPTRELGMQVTKVARMLAAK----HESE 309
AQTGSGKTL YLL IFSV+NT+ S VQAL+VVPTRELG+QVTKVARMLAAK +
Sbjct: 126 HAQTGSGKTLTYLLLIFSVVNTKISAVQALIVVPTRELGIQVTKVARMLAAKPMEPELEQ 185
Query: 308 KSCVVMALLDGGTLRRHKSWLKAEPPTIIVATLGSLCQMLEKQYFRLESLQVLVIDEVDF 129
KSC VMALLDGG L+RHKSWLKAEPPTI+VAT+ SLCQMLEKQ F+LES++VLVIDEVDF
Sbjct: 186 KSCTVMALLDGGMLKRHKSWLKAEPPTIVVATVRSLCQMLEKQIFKLESMRVLVIDEVDF 245
Query: 128 MFNSSKQAGALRRLLTSYSSISNRQTIFASASIPQHRRFLYD 3
MFN+SKQ G+LR+LLTSYSS +NRQT+FASASIPQHRRFL+D
Sbjct: 246 MFNASKQVGSLRKLLTSYSSTNNRQTVFASASIPQHRRFLHD 287
>ref|XP_006489326.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 58,
chloroplastic-like isoform X1 [Citrus sinensis]
Length = 473
Score = 311 bits (796), Expect = 3e-82
Identities = 153/216 (70%), Positives = 185/216 (85%), Gaps = 4/216 (1%)
Frame = -2
Query: 638 AGNRENAISTLRQLCQGHVPEHMICRMEEIGYLFPTNVQMQSLPLLFSGRDCVLQAQTGS 459
AG N++ TLR+LCQGHVPEH++ RM+E GY+ PT++Q ++LP+LFS RDC+L AQTGS
Sbjct: 60 AGTGNNSL-TLRELCQGHVPEHVLRRMDETGYVLPTDIQREALPVLFSSRDCILHAQTGS 118
Query: 458 GKTLAYLLQIFSVINTQRSKVQALVVVPTRELGMQVTKVARMLAAKHES----EKSCVVM 291
GKTL YLL IFS++N QRS VQA++VVPTRELGMQVTKVAR+LAAK K C VM
Sbjct: 119 GKTLTYLLLIFSLVNAQRSAVQAVIVVPTRELGMQVTKVARVLAAKPSDTDLEHKPCTVM 178
Query: 290 ALLDGGTLRRHKSWLKAEPPTIIVATLGSLCQMLEKQYFRLESLQVLVIDEVDFMFNSSK 111
ALLDGG LRRHKSWLKAEPPTI+VAT+GSLCQ++EK F+LES+QVLVIDEVDF+FNSSK
Sbjct: 179 ALLDGGMLRRHKSWLKAEPPTIVVATMGSLCQLIEKHIFKLESVQVLVIDEVDFLFNSSK 238
Query: 110 QAGALRRLLTSYSSISNRQTIFASASIPQHRRFLYD 3
Q +L++LL SYSS +NRQT+FASASIPQHRRFL++
Sbjct: 239 QVSSLKKLLASYSSCNNRQTVFASASIPQHRRFLHN 274
>ref|XP_002517195.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223543830|gb|EEF45358.1| dead box ATP-dependent RNA
helicase, putative [Ricinus communis]
Length = 476
Score = 308 bits (788), Expect = 2e-81
Identities = 155/209 (74%), Positives = 179/209 (85%)
Frame = -2
Query: 629 RENAISTLRQLCQGHVPEHMICRMEEIGYLFPTNVQMQSLPLLFSGRDCVLQAQTGSGKT 450
+ N TLR+LCQ +VPE ++ RMEEIGY+ PT+VQ Q+LP+LFSG+DC+L QTGSGKT
Sbjct: 76 KSNHFLTLRELCQNYVPEPVLHRMEEIGYVMPTDVQRQALPVLFSGQDCILHGQTGSGKT 135
Query: 449 LAYLLQIFSVINTQRSKVQALVVVPTRELGMQVTKVARMLAAKHESEKSCVVMALLDGGT 270
LAYLL I+SVIN QRS VQAL++VPTRELGMQVTKVARMLAAK VMALLDGG
Sbjct: 136 LAYLLLIYSVINAQRSAVQALIIVPTRELGMQVTKVARMLAAK---PMDVTVMALLDGGM 192
Query: 269 LRRHKSWLKAEPPTIIVATLGSLCQMLEKQYFRLESLQVLVIDEVDFMFNSSKQAGALRR 90
LRRHKSWLKAEPP I+VAT+ SLCQMLEK F+L+S+QVLVIDEVDFMFNSSKQ +LR+
Sbjct: 193 LRRHKSWLKAEPPKIVVATIASLCQMLEKHIFKLDSMQVLVIDEVDFMFNSSKQVSSLRK 252
Query: 89 LLTSYSSISNRQTIFASASIPQHRRFLYD 3
LLTSYSS ++RQT+FASASIPQHRRFLYD
Sbjct: 253 LLTSYSSCNSRQTVFASASIPQHRRFLYD 281
>gb|EOY05584.1| P-loop containing nucleoside triphosphate hydrolases superfamily
protein isoform 3 [Theobroma cacao]
Length = 351
Score = 306 bits (783), Expect = 9e-81
Identities = 150/207 (72%), Positives = 181/207 (87%), Gaps = 4/207 (1%)
Frame = -2
Query: 611 TLRQLCQGHVPEHMICRMEEIGYLFPTNVQMQSLPLLFSGRDCVLQAQTGSGKTLAYLLQ 432
TLR++CQ HVP+H++ RMEE+GY+ PT+VQ ++LP+LFSG DC+L AQTGSGKTL YLL
Sbjct: 72 TLREICQDHVPDHVLGRMEELGYVMPTDVQREALPVLFSGNDCILHAQTGSGKTLTYLLL 131
Query: 431 IFSVINTQRSKVQALVVVPTRELGMQVTKVARMLAAK----HESEKSCVVMALLDGGTLR 264
I+SVIN +RS VQAL+VVPTRELGMQVTKVARMLAAK +KS VMALLDGG LR
Sbjct: 132 IYSVINPKRSAVQALIVVPTRELGMQVTKVARMLAAKPMDPEVEQKSYTVMALLDGGMLR 191
Query: 263 RHKSWLKAEPPTIIVATLGSLCQMLEKQYFRLESLQVLVIDEVDFMFNSSKQAGALRRLL 84
RHKSWLKAEPP I+VAT+GSL QMLEKQ F+L+S+++LV+DEVDF+FNSSKQ ++R+LL
Sbjct: 192 RHKSWLKAEPPNIVVATIGSLSQMLEKQIFKLDSMRILVVDEVDFIFNSSKQVSSIRKLL 251
Query: 83 TSYSSISNRQTIFASASIPQHRRFLYD 3
TSYSS +NRQT+FASASIPQHRRFL+D
Sbjct: 252 TSYSSCNNRQTVFASASIPQHRRFLHD 278
>gb|EOY05583.1| P-loop containing nucleoside triphosphate hydrolases superfamily
protein isoform 2 [Theobroma cacao]
Length = 409
Score = 306 bits (783), Expect = 9e-81
Identities = 150/207 (72%), Positives = 181/207 (87%), Gaps = 4/207 (1%)
Frame = -2
Query: 611 TLRQLCQGHVPEHMICRMEEIGYLFPTNVQMQSLPLLFSGRDCVLQAQTGSGKTLAYLLQ 432
TLR++CQ HVP+H++ RMEE+GY+ PT+VQ ++LP+LFSG DC+L AQTGSGKTL YLL
Sbjct: 72 TLREICQDHVPDHVLGRMEELGYVMPTDVQREALPVLFSGNDCILHAQTGSGKTLTYLLL 131
Query: 431 IFSVINTQRSKVQALVVVPTRELGMQVTKVARMLAAK----HESEKSCVVMALLDGGTLR 264
I+SVIN +RS VQAL+VVPTRELGMQVTKVARMLAAK +KS VMALLDGG LR
Sbjct: 132 IYSVINPKRSAVQALIVVPTRELGMQVTKVARMLAAKPMDPEVEQKSYTVMALLDGGMLR 191
Query: 263 RHKSWLKAEPPTIIVATLGSLCQMLEKQYFRLESLQVLVIDEVDFMFNSSKQAGALRRLL 84
RHKSWLKAEPP I+VAT+GSL QMLEKQ F+L+S+++LV+DEVDF+FNSSKQ ++R+LL
Sbjct: 192 RHKSWLKAEPPNIVVATIGSLSQMLEKQIFKLDSMRILVVDEVDFIFNSSKQVSSIRKLL 251
Query: 83 TSYSSISNRQTIFASASIPQHRRFLYD 3
TSYSS +NRQT+FASASIPQHRRFL+D
Sbjct: 252 TSYSSCNNRQTVFASASIPQHRRFLHD 278
>gb|EOY05582.1| P-loop containing nucleoside triphosphate hydrolases superfamily
protein isoform 1 [Theobroma cacao]
Length = 477
Score = 306 bits (783), Expect = 9e-81
Identities = 150/207 (72%), Positives = 181/207 (87%), Gaps = 4/207 (1%)
Frame = -2
Query: 611 TLRQLCQGHVPEHMICRMEEIGYLFPTNVQMQSLPLLFSGRDCVLQAQTGSGKTLAYLLQ 432
TLR++CQ HVP+H++ RMEE+GY+ PT+VQ ++LP+LFSG DC+L AQTGSGKTL YLL
Sbjct: 72 TLREICQDHVPDHVLGRMEELGYVMPTDVQREALPVLFSGNDCILHAQTGSGKTLTYLLL 131
Query: 431 IFSVINTQRSKVQALVVVPTRELGMQVTKVARMLAAK----HESEKSCVVMALLDGGTLR 264
I+SVIN +RS VQAL+VVPTRELGMQVTKVARMLAAK +KS VMALLDGG LR
Sbjct: 132 IYSVINPKRSAVQALIVVPTRELGMQVTKVARMLAAKPMDPEVEQKSYTVMALLDGGMLR 191
Query: 263 RHKSWLKAEPPTIIVATLGSLCQMLEKQYFRLESLQVLVIDEVDFMFNSSKQAGALRRLL 84
RHKSWLKAEPP I+VAT+GSL QMLEKQ F+L+S+++LV+DEVDF+FNSSKQ ++R+LL
Sbjct: 192 RHKSWLKAEPPNIVVATIGSLSQMLEKQIFKLDSMRILVVDEVDFIFNSSKQVSSIRKLL 251
Query: 83 TSYSSISNRQTIFASASIPQHRRFLYD 3
TSYSS +NRQT+FASASIPQHRRFL+D
Sbjct: 252 TSYSSCNNRQTVFASASIPQHRRFLHD 278
>ref|NP_974812.1| DEAD-box ATP-dependent RNA helicase 58 [Arabidopsis thaliana]
gi|108861900|sp|Q3E9C3.1|RH58_ARATH RecName:
Full=DEAD-box ATP-dependent RNA helicase 58,
chloroplastic; Flags: Precursor
gi|332005287|gb|AED92670.1| DEAD-box ATP-dependent RNA
helicase 58 [Arabidopsis thaliana]
Length = 472
Score = 305 bits (781), Expect = 1e-80
Identities = 148/204 (72%), Positives = 179/204 (87%), Gaps = 1/204 (0%)
Frame = -2
Query: 611 TLRQLCQGHVPEHMICRMEEIGYLFPTNVQMQSLPLLFSGRDCVLQAQTGSGKTLAYLLQ 432
TLRQ+CQG VPEH++ RMEEIG++FPT++Q ++LP LF+GRDC+L AQTGSGKTL YLL
Sbjct: 74 TLRQICQGFVPEHILHRMEEIGFVFPTDIQREALPTLFTGRDCILHAQTGSGKTLTYLLL 133
Query: 431 IFSVINTQRSKVQALVVVPTRELGMQVTKVARMLAAKHESE-KSCVVMALLDGGTLRRHK 255
IFS+IN QRS VQA++VVPTRELGMQVTKVARMLAAK E + K C VMALLDGGTLRRHK
Sbjct: 134 IFSLINPQRSSVQAVIVVPTRELGMQVTKVARMLAAKSEIDVKGCTVMALLDGGTLRRHK 193
Query: 254 SWLKAEPPTIIVATLGSLCQMLEKQYFRLESLQVLVIDEVDFMFNSSKQAGALRRLLTSY 75
SWLKAEPP I+VAT+ SLC MLEK FR++S++VLV+DEVDF+F SSKQ G++R+LLTS+
Sbjct: 194 SWLKAEPPAILVATVASLCHMLEKHIFRIDSVRVLVVDEVDFLFYSSKQVGSVRKLLTSF 253
Query: 74 SSISNRQTIFASASIPQHRRFLYD 3
SS RQT+FASASIPQH+ F++D
Sbjct: 254 SSCDKRQTVFASASIPQHKHFVHD 277
>gb|EMJ24082.1| hypothetical protein PRUPE_ppa005191mg [Prunus persica]
Length = 473
Score = 304 bits (778), Expect = 3e-80
Identities = 153/216 (70%), Positives = 182/216 (84%), Gaps = 4/216 (1%)
Frame = -2
Query: 644 TEAGNRENAISTLRQLCQGHVPEHMICRMEEIGYLFPTNVQMQSLPLLFSGRDCVLQAQT 465
TEAG+ TLRQ+CQ HVP+H++C+MEE+G++ PT VQ Q+LP LFSGRDC+L AQT
Sbjct: 63 TEAGSEPEPF-TLRQICQSHVPDHVLCKMEELGFVVPTPVQRQALPTLFSGRDCILHAQT 121
Query: 464 GSGKTLAYLLQIFSVINTQRSKVQALVVVPTRELGMQVTKVARMLAAKHE----SEKSCV 297
GSGKTL YLL +FS++N +RS VQAL+VVPTRELGMQVTKVARMLA K + +KSC
Sbjct: 122 GSGKTLTYLLLVFSIVNARRSAVQALIVVPTRELGMQVTKVARMLATKPKEGELEQKSCT 181
Query: 296 VMALLDGGTLRRHKSWLKAEPPTIIVATLGSLCQMLEKQYFRLESLQVLVIDEVDFMFNS 117
VMALLDGG L RHKSWLKAEPPTI+VAT+GSLCQMLEK +LE+++VLVIDEVDFMF S
Sbjct: 182 VMALLDGGMLMRHKSWLKAEPPTIVVATIGSLCQMLEKHMIKLEAMRVLVIDEVDFMF-S 240
Query: 116 SKQAGALRRLLTSYSSISNRQTIFASASIPQHRRFL 9
SKQ +LR+LLTSYSSI+ RQT+FASASIPQH+ FL
Sbjct: 241 SKQVSSLRKLLTSYSSINTRQTVFASASIPQHKIFL 276
>ref|XP_004134454.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 58,
chloroplastic-like [Cucumis sativus]
gi|449531697|ref|XP_004172822.1| PREDICTED: DEAD-box
ATP-dependent RNA helicase 58, chloroplastic-like
[Cucumis sativus]
Length = 473
Score = 303 bits (776), Expect = 6e-80
Identities = 154/208 (74%), Positives = 180/208 (86%), Gaps = 4/208 (1%)
Frame = -2
Query: 614 STLRQLCQGHVPEHMICRMEEIGYLFPTNVQMQSLPLLFSGRDCVLQAQTGSGKTLAYLL 435
STLR++C GHVPEH++ R EEIG++ PT+VQ Q+LP+LFSGRDCVL AQTGSGKTL YLL
Sbjct: 71 STLREICNGHVPEHILRRTEEIGFVAPTDVQRQALPVLFSGRDCVLHAQTGSGKTLTYLL 130
Query: 434 QIFSVINTQRSKVQALVVVPTRELGMQVTKVARMLAAKHESEK----SCVVMALLDGGTL 267
IFSVIN ++S VQAL+VVPTRELGMQVTKVARMLAAK + + S VVMALLDGG L
Sbjct: 131 LIFSVINAKKSAVQALIVVPTRELGMQVTKVARMLAAKPAASEDGLNSYVVMALLDGGLL 190
Query: 266 RRHKSWLKAEPPTIIVATLGSLCQMLEKQYFRLESLQVLVIDEVDFMFNSSKQAGALRRL 87
RRHK+WLKA+PP I+VAT+GSLCQM+E+Q+ L SL VLVIDEVDFMF+SSKQ +L++L
Sbjct: 191 RRHKTWLKADPPEILVATVGSLCQMVERQFLDLGSLNVLVIDEVDFMFSSSKQVSSLKKL 250
Query: 86 LTSYSSISNRQTIFASASIPQHRRFLYD 3
LTSYSS SNRQTIFASASIPQHR FL+D
Sbjct: 251 LTSYSSFSNRQTIFASASIPQHRHFLHD 278
>ref|XP_002871872.1| hypothetical protein ARALYDRAFT_488806 [Arabidopsis lyrata subsp.
lyrata] gi|297317709|gb|EFH48131.1| hypothetical protein
ARALYDRAFT_488806 [Arabidopsis lyrata subsp. lyrata]
Length = 473
Score = 303 bits (775), Expect = 7e-80
Identities = 148/209 (70%), Positives = 180/209 (86%), Gaps = 1/209 (0%)
Frame = -2
Query: 626 ENAISTLRQLCQGHVPEHMICRMEEIGYLFPTNVQMQSLPLLFSGRDCVLQAQTGSGKTL 447
+ A TLR++CQG VPEH++ RMEEIG++ PT++Q ++LP LF+GRDC+L AQTGSGKTL
Sbjct: 70 DTAALTLRKICQGFVPEHILHRMEEIGFISPTDIQREALPTLFTGRDCILHAQTGSGKTL 129
Query: 446 AYLLQIFSVINTQRSKVQALVVVPTRELGMQVTKVARMLAAKHESE-KSCVVMALLDGGT 270
YLL IFS+IN QRS VQA++VVPTRELGMQVTKVARMLAAK E + K C VMALLDGGT
Sbjct: 130 TYLLLIFSLINPQRSSVQAVIVVPTRELGMQVTKVARMLAAKSEIDVKGCTVMALLDGGT 189
Query: 269 LRRHKSWLKAEPPTIIVATLGSLCQMLEKQYFRLESLQVLVIDEVDFMFNSSKQAGALRR 90
LRRHKSWLKAEPP I+VAT+ SLC MLEK FRL+S++VLV+DEVDF+F SSKQ G++R+
Sbjct: 190 LRRHKSWLKAEPPAILVATVASLCHMLEKHIFRLDSVKVLVVDEVDFLFYSSKQVGSVRK 249
Query: 89 LLTSYSSISNRQTIFASASIPQHRRFLYD 3
LLTS+SS RQT+FASASIPQH+ F++D
Sbjct: 250 LLTSFSSCDKRQTVFASASIPQHKHFVHD 278
>ref|XP_006290141.1| hypothetical protein CARUB_v10003807mg [Capsella rubella]
gi|482558847|gb|EOA23039.1| hypothetical protein
CARUB_v10003807mg [Capsella rubella]
Length = 471
Score = 302 bits (774), Expect = 1e-79
Identities = 148/209 (70%), Positives = 179/209 (85%), Gaps = 1/209 (0%)
Frame = -2
Query: 626 ENAISTLRQLCQGHVPEHMICRMEEIGYLFPTNVQMQSLPLLFSGRDCVLQAQTGSGKTL 447
E TLRQ+CQ VPEH++ RMEEIG++FPT++Q ++LP LF+GRDC+L AQTGSGKTL
Sbjct: 68 ETTALTLRQICQAFVPEHILHRMEEIGFVFPTDIQREALPTLFTGRDCILHAQTGSGKTL 127
Query: 446 AYLLQIFSVINTQRSKVQALVVVPTRELGMQVTKVARMLAAKHESE-KSCVVMALLDGGT 270
YLL IFS+IN QRS VQA++VVPTRELGMQVTKVARMLAAK + + K C VMALLDGGT
Sbjct: 128 TYLLLIFSLINPQRSSVQAVIVVPTRELGMQVTKVARMLAAKADIDVKGCTVMALLDGGT 187
Query: 269 LRRHKSWLKAEPPTIIVATLGSLCQMLEKQYFRLESLQVLVIDEVDFMFNSSKQAGALRR 90
LRRHKSWLKAEPP I+VAT+ SLC MLEK FRL+S++VLV+DEVDF+F SSKQ G++R+
Sbjct: 188 LRRHKSWLKAEPPAILVATVASLCHMLEKHIFRLDSVRVLVLDEVDFLFYSSKQVGSVRK 247
Query: 89 LLTSYSSISNRQTIFASASIPQHRRFLYD 3
LLTS+SS RQT+FASASIPQH+ F++D
Sbjct: 248 LLTSFSSCDKRQTVFASASIPQHKHFVHD 276