BLASTX nr result
ID: Catharanthus22_contig00015069
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00015069
(445 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002283496.2| PREDICTED: pre-mRNA-processing factor 40 hom... 84 3e-14
emb|CBI19367.3| unnamed protein product [Vitis vinifera] 80 4e-13
gb|EMJ28229.1| hypothetical protein PRUPE_ppa000697mg [Prunus pe... 70 3e-10
ref|XP_006343435.1| PREDICTED: pre-mRNA-processing protein 40A-l... 68 1e-09
ref|XP_006343434.1| PREDICTED: pre-mRNA-processing protein 40A-l... 68 1e-09
ref|XP_006343433.1| PREDICTED: pre-mRNA-processing protein 40A-l... 68 1e-09
ref|XP_004242948.1| PREDICTED: pre-mRNA-processing protein 40A-l... 68 1e-09
ref|XP_006606005.1| PREDICTED: pre-mRNA-processing protein 40A-l... 61 2e-07
gb|EOY15668.1| Pre-mRNA-processing protein 40A isoform 8 [Theobr... 61 2e-07
gb|EOY15667.1| Pre-mRNA-processing protein 40A isoform 7 [Theobr... 61 2e-07
gb|EOY15666.1| Pre-mRNA-processing protein 40A isoform 6 [Theobr... 61 2e-07
gb|EOY15665.1| Pre-mRNA-processing protein 40A isoform 5 [Theobr... 61 2e-07
gb|EOY15664.1| Pre-mRNA-processing protein 40A isoform 4 [Theobr... 61 2e-07
gb|EOY15663.1| Pre-mRNA-processing protein 40A isoform 3 [Theobr... 61 2e-07
gb|EOY15661.1| Pre-mRNA-processing protein 40A isoform 1 [Theobr... 61 2e-07
ref|XP_006589614.1| PREDICTED: pre-mRNA-processing protein 40A-l... 60 2e-07
ref|XP_003535678.1| PREDICTED: pre-mRNA-processing protein 40A-l... 60 2e-07
gb|ESW15134.1| hypothetical protein PHAVU_007G047100g [Phaseolus... 59 7e-07
gb|ESW15131.1| hypothetical protein PHAVU_007G047100g [Phaseolus... 59 7e-07
ref|XP_004156902.1| PREDICTED: pre-mRNA-processing protein 40A-l... 55 7e-06
>ref|XP_002283496.2| PREDICTED: pre-mRNA-processing factor 40 homolog B-like [Vitis
vinifera]
Length = 1020
Score = 83.6 bits (205), Expect = 3e-14
Identities = 38/52 (73%), Positives = 41/52 (78%)
Frame = -3
Query: 167 C*CKVMANNPQSSGGQPLRPPSVGSMAPQSFGAAFPMQFRPAMPGQQGQQFI 12
C C MANNPQSSG QPLRPP+VGSM PQ+FG MQFRPA+PGQQG FI
Sbjct: 10 CLCAGMANNPQSSGAQPLRPPAVGSMGPQNFGPPLSMQFRPAVPGQQGHPFI 61
>emb|CBI19367.3| unnamed protein product [Vitis vinifera]
Length = 1030
Score = 79.7 bits (195), Expect = 4e-13
Identities = 36/47 (76%), Positives = 39/47 (82%)
Frame = -3
Query: 152 MANNPQSSGGQPLRPPSVGSMAPQSFGAAFPMQFRPAMPGQQGQQFI 12
MANNPQSSG QPLRPP+VGSM PQ+FG MQFRPA+PGQQG FI
Sbjct: 1 MANNPQSSGAQPLRPPAVGSMGPQNFGPPLSMQFRPAVPGQQGHPFI 47
>gb|EMJ28229.1| hypothetical protein PRUPE_ppa000697mg [Prunus persica]
Length = 1031
Score = 70.1 bits (170), Expect = 3e-10
Identities = 31/47 (65%), Positives = 37/47 (78%)
Frame = -3
Query: 152 MANNPQSSGGQPLRPPSVGSMAPQSFGAAFPMQFRPAMPGQQGQQFI 12
MANNPQSS QP RPP V S+ PQSFG++ +Q+RP +P QQGQQFI
Sbjct: 1 MANNPQSSAAQPFRPPPVASLGPQSFGSSPSLQYRPVVPTQQGQQFI 47
>ref|XP_006343435.1| PREDICTED: pre-mRNA-processing protein 40A-like isoform X3 [Solanum
tuberosum]
Length = 864
Score = 67.8 bits (164), Expect = 1e-09
Identities = 33/50 (66%), Positives = 37/50 (74%)
Frame = -3
Query: 152 MANNPQSSGGQPLRPPSVGSMAPQSFGAAFPMQFRPAMPGQQGQQFISPV 3
MA+NP SG QPL PPSVGS PQ FG +FPMQFRPA+ QQGQ F P+
Sbjct: 1 MASNPPPSGPQPLWPPSVGSTPPQGFG-SFPMQFRPALSTQQGQHFAPPI 49
>ref|XP_006343434.1| PREDICTED: pre-mRNA-processing protein 40A-like isoform X2 [Solanum
tuberosum]
Length = 872
Score = 67.8 bits (164), Expect = 1e-09
Identities = 33/50 (66%), Positives = 37/50 (74%)
Frame = -3
Query: 152 MANNPQSSGGQPLRPPSVGSMAPQSFGAAFPMQFRPAMPGQQGQQFISPV 3
MA+NP SG QPL PPSVGS PQ FG +FPMQFRPA+ QQGQ F P+
Sbjct: 1 MASNPPPSGPQPLWPPSVGSTPPQGFG-SFPMQFRPALSTQQGQHFAPPI 49
>ref|XP_006343433.1| PREDICTED: pre-mRNA-processing protein 40A-like isoform X1 [Solanum
tuberosum]
Length = 1031
Score = 67.8 bits (164), Expect = 1e-09
Identities = 33/50 (66%), Positives = 37/50 (74%)
Frame = -3
Query: 152 MANNPQSSGGQPLRPPSVGSMAPQSFGAAFPMQFRPAMPGQQGQQFISPV 3
MA+NP SG QPL PPSVGS PQ FG +FPMQFRPA+ QQGQ F P+
Sbjct: 1 MASNPPPSGPQPLWPPSVGSTPPQGFG-SFPMQFRPALSTQQGQHFAPPI 49
>ref|XP_004242948.1| PREDICTED: pre-mRNA-processing protein 40A-like [Solanum
lycopersicum]
Length = 998
Score = 67.8 bits (164), Expect = 1e-09
Identities = 33/50 (66%), Positives = 37/50 (74%)
Frame = -3
Query: 152 MANNPQSSGGQPLRPPSVGSMAPQSFGAAFPMQFRPAMPGQQGQQFISPV 3
MA+NP SG QPL PPSVGS PQ FG +FPMQFRPA+ QQGQ F P+
Sbjct: 1 MASNPPPSGPQPLWPPSVGSTPPQGFG-SFPMQFRPALSTQQGQHFAPPI 49
>ref|XP_006606005.1| PREDICTED: pre-mRNA-processing protein 40A-like isoform X1 [Glycine
max] gi|571567022|ref|XP_006606006.1| PREDICTED:
pre-mRNA-processing protein 40A-like isoform X2 [Glycine
max]
Length = 1008
Score = 60.8 bits (146), Expect = 2e-07
Identities = 30/49 (61%), Positives = 36/49 (73%), Gaps = 1/49 (2%)
Frame = -3
Query: 152 MANNPQSSGGQPLRPPSVGSM-APQSFGAAFPMQFRPAMPGQQGQQFIS 9
M+NNPQ G QPLRPP GS+ P++F P+QFRPA+P QQ QQFIS
Sbjct: 1 MSNNPQYPGLQPLRPPIAGSLDPPRNFVPPMPVQFRPAVPTQQSQQFIS 49
>gb|EOY15668.1| Pre-mRNA-processing protein 40A isoform 8 [Theobroma cacao]
Length = 789
Score = 60.8 bits (146), Expect = 2e-07
Identities = 27/47 (57%), Positives = 33/47 (70%)
Frame = -3
Query: 152 MANNPQSSGGQPLRPPSVGSMAPQSFGAAFPMQFRPAMPGQQGQQFI 12
MANN Q S QP PP+VGS+ PQS+G+ QFRP +P QQGQ F+
Sbjct: 1 MANNSQPSSAQPHWPPAVGSLGPQSYGSPLSSQFRPVVPMQQGQHFV 47
>gb|EOY15667.1| Pre-mRNA-processing protein 40A isoform 7 [Theobroma cacao]
Length = 787
Score = 60.8 bits (146), Expect = 2e-07
Identities = 27/47 (57%), Positives = 33/47 (70%)
Frame = -3
Query: 152 MANNPQSSGGQPLRPPSVGSMAPQSFGAAFPMQFRPAMPGQQGQQFI 12
MANN Q S QP PP+VGS+ PQS+G+ QFRP +P QQGQ F+
Sbjct: 1 MANNSQPSSAQPHWPPAVGSLGPQSYGSPLSSQFRPVVPMQQGQHFV 47
>gb|EOY15666.1| Pre-mRNA-processing protein 40A isoform 6 [Theobroma cacao]
Length = 774
Score = 60.8 bits (146), Expect = 2e-07
Identities = 27/47 (57%), Positives = 33/47 (70%)
Frame = -3
Query: 152 MANNPQSSGGQPLRPPSVGSMAPQSFGAAFPMQFRPAMPGQQGQQFI 12
MANN Q S QP PP+VGS+ PQS+G+ QFRP +P QQGQ F+
Sbjct: 1 MANNSQPSSAQPHWPPAVGSLGPQSYGSPLSSQFRPVVPMQQGQHFV 47
>gb|EOY15665.1| Pre-mRNA-processing protein 40A isoform 5 [Theobroma cacao]
Length = 904
Score = 60.8 bits (146), Expect = 2e-07
Identities = 27/47 (57%), Positives = 33/47 (70%)
Frame = -3
Query: 152 MANNPQSSGGQPLRPPSVGSMAPQSFGAAFPMQFRPAMPGQQGQQFI 12
MANN Q S QP PP+VGS+ PQS+G+ QFRP +P QQGQ F+
Sbjct: 1 MANNSQPSSAQPHWPPAVGSLGPQSYGSPLSSQFRPVVPMQQGQHFV 47
>gb|EOY15664.1| Pre-mRNA-processing protein 40A isoform 4 [Theobroma cacao]
Length = 844
Score = 60.8 bits (146), Expect = 2e-07
Identities = 27/47 (57%), Positives = 33/47 (70%)
Frame = -3
Query: 152 MANNPQSSGGQPLRPPSVGSMAPQSFGAAFPMQFRPAMPGQQGQQFI 12
MANN Q S QP PP+VGS+ PQS+G+ QFRP +P QQGQ F+
Sbjct: 1 MANNSQPSSAQPHWPPAVGSLGPQSYGSPLSSQFRPVVPMQQGQHFV 47
>gb|EOY15663.1| Pre-mRNA-processing protein 40A isoform 3 [Theobroma cacao]
Length = 1041
Score = 60.8 bits (146), Expect = 2e-07
Identities = 27/47 (57%), Positives = 33/47 (70%)
Frame = -3
Query: 152 MANNPQSSGGQPLRPPSVGSMAPQSFGAAFPMQFRPAMPGQQGQQFI 12
MANN Q S QP PP+VGS+ PQS+G+ QFRP +P QQGQ F+
Sbjct: 1 MANNSQPSSAQPHWPPAVGSLGPQSYGSPLSSQFRPVVPMQQGQHFV 47
>gb|EOY15661.1| Pre-mRNA-processing protein 40A isoform 1 [Theobroma cacao]
gi|508723765|gb|EOY15662.1| Pre-mRNA-processing protein
40A isoform 1 [Theobroma cacao]
Length = 1032
Score = 60.8 bits (146), Expect = 2e-07
Identities = 27/47 (57%), Positives = 33/47 (70%)
Frame = -3
Query: 152 MANNPQSSGGQPLRPPSVGSMAPQSFGAAFPMQFRPAMPGQQGQQFI 12
MANN Q S QP PP+VGS+ PQS+G+ QFRP +P QQGQ F+
Sbjct: 1 MANNSQPSSAQPHWPPAVGSLGPQSYGSPLSSQFRPVVPMQQGQHFV 47
>ref|XP_006589614.1| PREDICTED: pre-mRNA-processing protein 40A-like isoform X2 [Glycine
max]
Length = 1017
Score = 60.5 bits (145), Expect = 2e-07
Identities = 30/49 (61%), Positives = 35/49 (71%), Gaps = 1/49 (2%)
Frame = -3
Query: 152 MANNPQSSGGQPLRPPSVGSM-APQSFGAAFPMQFRPAMPGQQGQQFIS 9
MANNPQ G QPLRPP GS+ P++F P+QFRP +P QQ QQFIS
Sbjct: 1 MANNPQYPGLQPLRPPIAGSLDPPRNFVPPMPVQFRPVVPTQQSQQFIS 49
>ref|XP_003535678.1| PREDICTED: pre-mRNA-processing protein 40A-like isoform X1 [Glycine
max]
Length = 1017
Score = 60.5 bits (145), Expect = 2e-07
Identities = 30/49 (61%), Positives = 35/49 (71%), Gaps = 1/49 (2%)
Frame = -3
Query: 152 MANNPQSSGGQPLRPPSVGSM-APQSFGAAFPMQFRPAMPGQQGQQFIS 9
MANNPQ G QPLRPP GS+ P++F P+QFRP +P QQ QQFIS
Sbjct: 1 MANNPQYPGLQPLRPPIAGSLDPPRNFVPPMPVQFRPVVPTQQSQQFIS 49
>gb|ESW15134.1| hypothetical protein PHAVU_007G047100g [Phaseolus vulgaris]
Length = 1020
Score = 58.9 bits (141), Expect = 7e-07
Identities = 28/49 (57%), Positives = 35/49 (71%), Gaps = 1/49 (2%)
Frame = -3
Query: 152 MANNPQSSGGQPLRPPSVGSM-APQSFGAAFPMQFRPAMPGQQGQQFIS 9
M+NNPQ G QPLRPP GS+ P+++ P+QFRP +P QQ QQFIS
Sbjct: 1 MSNNPQFPGLQPLRPPITGSVDPPRNYAPPMPVQFRPVVPAQQPQQFIS 49
>gb|ESW15131.1| hypothetical protein PHAVU_007G047100g [Phaseolus vulgaris]
gi|561016328|gb|ESW15132.1| hypothetical protein
PHAVU_007G047100g [Phaseolus vulgaris]
Length = 1019
Score = 58.9 bits (141), Expect = 7e-07
Identities = 28/49 (57%), Positives = 35/49 (71%), Gaps = 1/49 (2%)
Frame = -3
Query: 152 MANNPQSSGGQPLRPPSVGSM-APQSFGAAFPMQFRPAMPGQQGQQFIS 9
M+NNPQ G QPLRPP GS+ P+++ P+QFRP +P QQ QQFIS
Sbjct: 1 MSNNPQFPGLQPLRPPITGSVDPPRNYAPPMPVQFRPVVPAQQPQQFIS 49
>ref|XP_004156902.1| PREDICTED: pre-mRNA-processing protein 40A-like [Cucumis sativus]
Length = 983
Score = 55.5 bits (132), Expect = 7e-06
Identities = 29/48 (60%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Frame = -3
Query: 152 MANNPQSSGGQPLRPPSVGSM-APQSFGAAFPMQFRPAMPGQQGQQFI 12
MANNPQ SG QPLRPP VG M +SF QFRPA+PG QQF+
Sbjct: 1 MANNPQYSGLQPLRPPVVGPMDQGRSFVPPMTAQFRPAVPGPHSQQFV 48