BLASTX nr result
ID: Catharanthus22_contig00015055
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00015055
(600 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002277434.1| PREDICTED: pentatricopeptide repeat-containi... 77 3e-12
emb|CAN66681.1| hypothetical protein VITISV_005087 [Vitis vinifera] 77 3e-12
emb|CBI38550.3| unnamed protein product [Vitis vinifera] 77 4e-12
gb|EXB68732.1| hypothetical protein L484_024754 [Morus notabilis] 71 3e-10
ref|XP_004303063.1| PREDICTED: pentatricopeptide repeat-containi... 70 4e-10
ref|XP_006484704.1| PREDICTED: pentatricopeptide repeat-containi... 66 6e-09
ref|XP_006437400.1| hypothetical protein CICLE_v10030585mg [Citr... 66 6e-09
ref|XP_002325452.2| hypothetical protein POPTR_0019s06000g [Popu... 66 6e-09
ref|XP_004168937.1| PREDICTED: pentatricopeptide repeat-containi... 64 4e-08
ref|XP_004151848.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 64 4e-08
ref|XP_002524030.1| pentatricopeptide repeat-containing protein,... 62 1e-07
ref|XP_006344658.1| PREDICTED: pentatricopeptide repeat-containi... 58 2e-06
ref|XP_006344657.1| PREDICTED: pentatricopeptide repeat-containi... 58 2e-06
ref|XP_004231279.1| PREDICTED: pentatricopeptide repeat-containi... 58 2e-06
>ref|XP_002277434.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
mitochondrial-like [Vitis vinifera]
Length = 835
Score = 77.4 bits (189), Expect = 3e-12
Identities = 40/60 (66%), Positives = 47/60 (78%)
Frame = -3
Query: 583 LERSLKESYRAEARRLFIEMNEKGFIPRKTTLSFISSAVAKAGKMDDAQRWLEKLYKKKS 404
L +SLK SY+AEA+RLF EMNEKGFIP + TL+ IS +AK GK DAQR L KLYKKK+
Sbjct: 735 LNKSLKRSYQAEAKRLFEEMNEKGFIPCENTLACISFTLAKPGKKADAQRILNKLYKKKT 794
>emb|CAN66681.1| hypothetical protein VITISV_005087 [Vitis vinifera]
Length = 882
Score = 77.4 bits (189), Expect = 3e-12
Identities = 40/60 (66%), Positives = 47/60 (78%)
Frame = -3
Query: 583 LERSLKESYRAEARRLFIEMNEKGFIPRKTTLSFISSAVAKAGKMDDAQRWLEKLYKKKS 404
L +SLK SY+AEA+RLF EMNEKGFIP + TL+ IS +AK GK DAQR L KLYKKK+
Sbjct: 735 LNKSLKRSYQAEAKRLFEEMNEKGFIPCENTLACISFTLAKPGKKADAQRILNKLYKKKT 794
>emb|CBI38550.3| unnamed protein product [Vitis vinifera]
Length = 795
Score = 77.0 bits (188), Expect = 4e-12
Identities = 40/59 (67%), Positives = 46/59 (77%)
Frame = -3
Query: 583 LERSLKESYRAEARRLFIEMNEKGFIPRKTTLSFISSAVAKAGKMDDAQRWLEKLYKKK 407
L +SLK SY+AEA+RLF EMNEKGFIP + TL+ IS +AK GK DAQR L KLYKKK
Sbjct: 735 LNKSLKRSYQAEAKRLFEEMNEKGFIPCENTLACISFTLAKPGKKADAQRILNKLYKKK 793
>gb|EXB68732.1| hypothetical protein L484_024754 [Morus notabilis]
Length = 1019
Score = 70.9 bits (172), Expect = 3e-10
Identities = 35/67 (52%), Positives = 51/67 (76%), Gaps = 1/67 (1%)
Frame = -3
Query: 598 LSKK-VLERSLKESYRAEARRLFIEMNEKGFIPRKTTLSFISSAVAKAGKMDDAQRWLEK 422
LSK+ LER LK+SY EA+RL +EM+EKG++P +T +ISS A+ GK DA+R L++
Sbjct: 953 LSKRPALERPLKKSYLVEAKRLLVEMHEKGYVPCGSTQQYISSTFARPGKRTDAERLLKE 1012
Query: 421 LYKKKSS 401
+YK+K+S
Sbjct: 1013 MYKRKNS 1019
>ref|XP_004303063.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 944
Score = 70.1 bits (170), Expect = 4e-10
Identities = 34/60 (56%), Positives = 46/60 (76%)
Frame = -3
Query: 583 LERSLKESYRAEARRLFIEMNEKGFIPRKTTLSFISSAVAKAGKMDDAQRWLEKLYKKKS 404
+E+ ++SYRAEA+RL IEMNEKG++P +TLS ISS A+ GK DAQR L++LY K+
Sbjct: 884 VEKKFRKSYRAEAKRLLIEMNEKGYVPGGSTLSSISSTFARPGKKADAQRLLKELYISKN 943
>ref|XP_006484704.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
mitochondrial-like [Citrus sinensis]
Length = 1039
Score = 66.2 bits (160), Expect = 6e-09
Identities = 32/57 (56%), Positives = 44/57 (77%)
Frame = -3
Query: 583 LERSLKESYRAEARRLFIEMNEKGFIPRKTTLSFISSAVAKAGKMDDAQRWLEKLYK 413
L+R+L SYRAEA++LF+EMNEKGF+P ++T + SS A+ GK DAQR L++ YK
Sbjct: 979 LDRTLILSYRAEAKKLFMEMNEKGFVPCESTQTCFSSTFARPGKKADAQRLLQEFYK 1035
>ref|XP_006437400.1| hypothetical protein CICLE_v10030585mg [Citrus clementina]
gi|557539596|gb|ESR50640.1| hypothetical protein
CICLE_v10030585mg [Citrus clementina]
Length = 1039
Score = 66.2 bits (160), Expect = 6e-09
Identities = 32/57 (56%), Positives = 44/57 (77%)
Frame = -3
Query: 583 LERSLKESYRAEARRLFIEMNEKGFIPRKTTLSFISSAVAKAGKMDDAQRWLEKLYK 413
L+R+L SYRAEA++LF+EMNEKGF+P ++T + SS A+ GK DAQR L++ YK
Sbjct: 979 LDRTLILSYRAEAKKLFMEMNEKGFVPCESTQTCFSSTFARPGKKADAQRLLQEFYK 1035
>ref|XP_002325452.2| hypothetical protein POPTR_0019s06000g [Populus trichocarpa]
gi|550316902|gb|EEE99833.2| hypothetical protein
POPTR_0019s06000g [Populus trichocarpa]
Length = 941
Score = 66.2 bits (160), Expect = 6e-09
Identities = 32/61 (52%), Positives = 44/61 (72%)
Frame = -3
Query: 583 LERSLKESYRAEARRLFIEMNEKGFIPRKTTLSFISSAVAKAGKMDDAQRWLEKLYKKKS 404
L+R K++YR EAR LF EMNEKGF+P + TL+ ISS A+ G + DA+ L+ +YK+K
Sbjct: 881 LDRISKKTYRTEARTLFAEMNEKGFVPCENTLACISSTFARPGMVVDAKHMLKDMYKRKQ 940
Query: 403 S 401
S
Sbjct: 941 S 941
>ref|XP_004168937.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
mitochondrial-like [Cucumis sativus]
Length = 683
Score = 63.5 bits (153), Expect = 4e-08
Identities = 32/59 (54%), Positives = 43/59 (72%)
Frame = -3
Query: 583 LERSLKESYRAEARRLFIEMNEKGFIPRKTTLSFISSAVAKAGKMDDAQRWLEKLYKKK 407
L +LK SYRAEA+RLFIEMN++GF+P ++T + ISS A GK DA+ L+ YK+K
Sbjct: 623 LGSTLKISYRAEAKRLFIEMNDRGFVPCESTQACISSTFAAPGKKADARMLLKSTYKRK 681
>ref|XP_004151848.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g14770, mitochondrial-like, partial [Cucumis
sativus]
Length = 697
Score = 63.5 bits (153), Expect = 4e-08
Identities = 32/59 (54%), Positives = 43/59 (72%)
Frame = -3
Query: 583 LERSLKESYRAEARRLFIEMNEKGFIPRKTTLSFISSAVAKAGKMDDAQRWLEKLYKKK 407
L +LK SYRAEA+RLFIEMN++GF+P ++T + ISS A GK DA+ L+ YK+K
Sbjct: 637 LGSTLKISYRAEAKRLFIEMNDRGFVPCESTQACISSTFAAPGKKADARMLLKSTYKRK 695
>ref|XP_002524030.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223536757|gb|EEF38398.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 1016
Score = 62.0 bits (149), Expect = 1e-07
Identities = 32/75 (42%), Positives = 51/75 (68%), Gaps = 7/75 (9%)
Frame = -3
Query: 583 LERSLKESYRAEARRLFIEMNEKGFIPRKTTLSFISSAVAKAGKMDDAQRWLEKLY---- 416
L+R+LK+ YR +A+ L EMN+KGF+P K+T++ ISS A+ GKM DA++ L++++
Sbjct: 886 LDRTLKKIYRTDAKNLITEMNDKGFVPCKSTIACISSTFARPGKMLDAEKLLKEIFSHAN 945
Query: 415 ---KKKSS*PQVRQL 380
K+K Q +QL
Sbjct: 946 KSLKEKKRKQQQKQL 960
>ref|XP_006344658.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
mitochondrial-like isoform X2 [Solanum tuberosum]
Length = 822
Score = 57.8 bits (138), Expect = 2e-06
Identities = 31/67 (46%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Frame = -3
Query: 598 LSKKV-LERSLKESYRAEARRLFIEMNEKGFIPRKTTLSFISSAVAKAGKMDDAQRWLEK 422
LSK+ LERSL+ S R+E R+L EM +KGF P++TTL +I+ +K+G+ +D + WL +
Sbjct: 757 LSKRPELERSLRLSCRSEVRKLLEEMKDKGFTPKETTLCYINPGFSKSGE-NDTEWWLNR 815
Query: 421 LYKKKSS 401
+K K S
Sbjct: 816 WHKTKQS 822
>ref|XP_006344657.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
mitochondrial-like isoform X1 [Solanum tuberosum]
Length = 1035
Score = 57.8 bits (138), Expect = 2e-06
Identities = 31/67 (46%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Frame = -3
Query: 598 LSKKV-LERSLKESYRAEARRLFIEMNEKGFIPRKTTLSFISSAVAKAGKMDDAQRWLEK 422
LSK+ LERSL+ S R+E R+L EM +KGF P++TTL +I+ +K+G+ +D + WL +
Sbjct: 970 LSKRPELERSLRLSCRSEVRKLLEEMKDKGFTPKETTLCYINPGFSKSGE-NDTEWWLNR 1028
Query: 421 LYKKKSS 401
+K K S
Sbjct: 1029 WHKTKQS 1035
>ref|XP_004231279.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
mitochondrial-like [Solanum lycopersicum]
Length = 1035
Score = 57.8 bits (138), Expect = 2e-06
Identities = 31/67 (46%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Frame = -3
Query: 598 LSKKV-LERSLKESYRAEARRLFIEMNEKGFIPRKTTLSFISSAVAKAGKMDDAQRWLEK 422
LSK+ LERSL+ S R+E R+L EM +KGF P++TTL +I+ +K+G+ +D + WL +
Sbjct: 970 LSKRPELERSLRLSCRSEVRKLLEEMKDKGFTPKETTLCYINPGFSKSGE-NDTEWWLNR 1028
Query: 421 LYKKKSS 401
+K K S
Sbjct: 1029 WHKTKQS 1035