BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00014903
         (4203 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006366498.1| PREDICTED: probable DNA-directed RNA polymer...  1868   0.0  
ref|XP_004229596.1| PREDICTED: DNA-directed RNA polymerase I sub...  1868   0.0  
ref|XP_002263835.2| PREDICTED: DNA-directed RNA polymerase I sub...  1801   0.0  
ref|XP_004146776.1| PREDICTED: DNA-directed RNA polymerase I sub...  1775   0.0  
ref|XP_003542805.1| PREDICTED: DNA-directed RNA polymerase I sub...  1758   0.0  
emb|CBI35100.3| unnamed protein product [Vitis vinifera]             1748   0.0  
gb|EOY19647.1| Nuclear RNA polymerase A2 isoform 2 [Theobroma ca...  1747   0.0  
ref|XP_003550091.1| PREDICTED: probable DNA-directed RNA polymer...  1747   0.0  
gb|ESW05690.1| hypothetical protein PHAVU_011G201300g [Phaseolus...  1728   0.0  
ref|XP_006464287.1| PREDICTED: probable DNA-directed RNA polymer...  1724   0.0  
ref|XP_004486057.1| PREDICTED: probable DNA-directed RNA polymer...  1720   0.0  
ref|XP_002529996.1| DNA-directed RNA polymerase I subunit, putat...  1720   0.0  
ref|XP_006594369.1| PREDICTED: DNA-directed RNA polymerase I sub...  1662   0.0  
ref|XP_004307166.1| PREDICTED: DNA-directed RNA polymerase I sub...  1659   0.0  
ref|XP_004300118.1| PREDICTED: DNA-directed RNA polymerase I sub...  1655   0.0  
ref|XP_006415532.1| hypothetical protein EUTSA_v10006599mg [Eutr...  1641   0.0  
ref|NP_564341.2| nuclear RNA polymerase A2 [Arabidopsis thaliana...  1630   0.0  
ref|XP_006306612.1| hypothetical protein CARUB_v10008127mg [Caps...  1625   0.0  
ref|XP_002893589.1| hypothetical protein ARALYDRAFT_313639 [Arab...  1625   0.0  
ref|XP_006428126.1| hypothetical protein CICLE_v10024768mg [Citr...  1615   0.0  

>ref|XP_006366498.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2-like
            [Solanum tuberosum]
          Length = 1179

 Score = 1868 bits (4840), Expect = 0.0
 Identities = 921/1167 (78%), Positives = 1028/1167 (88%), Gaps = 4/1167 (0%)
 Frame = +3

Query: 189  HLMKEKDYTALADLFRHHIESFDYMVDQGLEIMLNNIKPVEIFNSSTNQKLKISFEKPEV 368
            HL+ EKDY+AL +LF HHIESFDYMVD GLE ML NIKP+EI +S ++ KL+I F KPE+
Sbjct: 13   HLVAEKDYSALKELFSHHIESFDYMVDNGLETMLLNIKPIEIVDSFSSLKLRIWFGKPEL 72

Query: 369  YPPQKERAMRTLPDTLYPFECRQAKISYTGKFLVNICFQYGDEKVKVREKTNFGQFPIML 548
            +PPQKERA +T+ D LYPFECRQAK+SYTGKFLV+ICFQYGD  V +REK NFGQFPIML
Sbjct: 73   FPPQKERASKTMHDALYPFECRQAKLSYTGKFLVDICFQYGDGAV-IREKFNFGQFPIML 131

Query: 549  KSKLCHLRGAD-TKKLVSLKEEASEMGGYFILNGLERVVRLLILPKRNYPTSMVRNSFRE 725
            KSKLCHLRGAD ++KL++ KEE SEMGGYFIL GLERV+RL+ILPKRNYPTSM RNSFR+
Sbjct: 132  KSKLCHLRGADDSRKLIAYKEEPSEMGGYFILKGLERVIRLIILPKRNYPTSMARNSFRD 191

Query: 726  RREGYTDKAVVIRCVREDLSAVTLKLYYLSNGSARLGFWIQGREYLLPVGLVLKALADTS 905
            RREGY+DKAVVIRCVRED SAV+LKLYYL+NGSARLGFWIQGREYLLPVG++LKAL DT+
Sbjct: 192  RREGYSDKAVVIRCVREDQSAVSLKLYYLNNGSARLGFWIQGREYLLPVGIILKALVDTT 251

Query: 906  DHEIYVSLTCCYDEKYDGVKGSVGTQLVGERAKIILDEVHALSLFTREQCLEHIGKHFQP 1085
            DHEIYV+LTCCY+E+ D VKGSVGTQLVGERAKIILDEV ALSLFTR QCL HIG+HFQP
Sbjct: 252  DHEIYVNLTCCYNEECDRVKGSVGTQLVGERAKIILDEVQALSLFTRAQCLRHIGEHFQP 311

Query: 1086 VMVGMEKEKPTAVADAVLEEYIFVHLYNNHDKFNLLLYMLQKLFSLVDQTSVPDNPDSLQ 1265
            V++GM+ +    VADAVL +YIFVHL NNHDKFNLL++MLQKLFSL+DQTSV DNPDSLQ
Sbjct: 312  VVIGMQNDSYKTVADAVLRDYIFVHLDNNHDKFNLLIFMLQKLFSLIDQTSVLDNPDSLQ 371

Query: 1266 NQEILLPGHLITIYLKEKLQEWLLKVKRQLQDETDNNKK-FEFTNLADIKKVIDKNSPKQ 1442
            NQE+LLPGHLITIYLKEKLQ+WLLK++R LQ+ETD  KK FE ++L D+KK I+KN+PKQ
Sbjct: 372  NQEVLLPGHLITIYLKEKLQDWLLKLQRSLQEETDGEKKKFELSSLTDVKKAIEKNAPKQ 431

Query: 1443 ISSAIENMLKTGRLATQSGLDLQQRAGMTVQAERLNFLRFLSHFRAVHRGASFAGLRTTS 1622
            I  AIE+MLKTGRLATQSGLDLQQRAGMTVQAE+LNFLRFLSHFRAVHRGASFAGLRTTS
Sbjct: 432  IGLAIESMLKTGRLATQSGLDLQQRAGMTVQAEKLNFLRFLSHFRAVHRGASFAGLRTTS 491

Query: 1623 VRKLLPESWGFLCPVHTPDGEPCGLLNHMTSTCRITSFYDSKGNIRDFFKMRMXXXXXXX 1802
            VRKLLPESWGFLCPVHTPDGEPCGLLNHMT++CRITS+YDSKGN++DFFKMRM       
Sbjct: 492  VRKLLPESWGFLCPVHTPDGEPCGLLNHMTASCRITSYYDSKGNVKDFFKMRMSILNVLI 551

Query: 1803 XXXXXXXXPKLVHAGPPKVLSVLLDGRIVGSIPIEMVEKAVSHLRRLKLSAM--IPEDLE 1976
                    PKLV  GPP++LSVLLDGRI G IP +++EKAV+HLRRLKLS+   IP DLE
Sbjct: 552  AIGMTPPSPKLVQGGPPELLSVLLDGRIAGYIPSDLIEKAVTHLRRLKLSSTSSIPVDLE 611

Query: 1977 VGYVPLSTCGTYPGLYLFTCPSRFIRPVKNISVPSGKENAVELIGPFEQVYMEISCPDGG 2156
            VGY+PLS  G YPGLYLFT PSRF+RPV+NIS P+ + N +EL+GPFEQVYMEISCPDGG
Sbjct: 612  VGYIPLSMNGAYPGLYLFTSPSRFVRPVRNISAPAEEGNDLELVGPFEQVYMEISCPDGG 671

Query: 2157 DGGRKDVFPATHEEIHPTGFLSVVANLTPWSDHNQSPRNMYQCQMGKQTMGFPSQAIHHR 2336
            DGGRK +FPATH EIHPT  LSVV NLTPWSDHNQSPRNMYQCQMGKQTMGF SQA++ R
Sbjct: 672  DGGRKTLFPATHREIHPTNILSVVGNLTPWSDHNQSPRNMYQCQMGKQTMGFSSQALNCR 731

Query: 2337 ADQKLYHLQTPQTPIVRTKAYENYNIDDFPLGTNAIVAVLAYSGYDMEDAMILNKSSVER 2516
            ADQKLYHLQTPQTPIVRTKAYE Y +DD+PLGTNAIVAVLAYSGYDMEDAM+LNKSSV+R
Sbjct: 732  ADQKLYHLQTPQTPIVRTKAYEKYCVDDYPLGTNAIVAVLAYSGYDMEDAMVLNKSSVDR 791

Query: 2517 GMFHGHIYQTETIDLVEQSSKSDRAGRTFRRSNLDKSSRHLIDSDGLPYIGQRIKPDEPY 2696
            GM HGHIYQTETIDL EQS+KSDRA R FRRSNLDKSS  LID+DGLPY+GQRI P+EPY
Sbjct: 792  GMCHGHIYQTETIDLTEQSAKSDRAQRLFRRSNLDKSSHQLIDTDGLPYVGQRINPNEPY 851

Query: 2697 CSIYNEITSSTCNTKLKGSEPVIVDYVAVDVKNKKNLQKANIRFRRTRNPVIGDKFSSRH 2876
            CSIYNEITS T + KLKGSEPV+VDYVAVDVKNK +LQKANIRFRR+RNPVIGDKFSSRH
Sbjct: 852  CSIYNEITSQTTSMKLKGSEPVVVDYVAVDVKNKTHLQKANIRFRRSRNPVIGDKFSSRH 911

Query: 2877 GQKGVCSQLWSDIDMPFSAVTGMRPDLIINPHAFPSRMTIGMLLESMAAKGGAIHGKFID 3056
            GQKGVCSQLW D+DMPFSAVTGMRPDLIINPHAFPSRMTI MLLES+AAKGGA+HGKF+D
Sbjct: 912  GQKGVCSQLWPDVDMPFSAVTGMRPDLIINPHAFPSRMTIAMLLESIAAKGGALHGKFVD 971

Query: 3057 ATPFGSSPAHASEGQKSESSSLVDELGEMLRAEGFNYHGNEVLYSGVYGTELTCEIFIGP 3236
            ATPF    ++  +  +SESSSLVD+LG ML   GFN+HG EVLYSGVYGTELTC IFIGP
Sbjct: 972  ATPF----SNTMKESESESSSLVDDLGSMLAVCGFNHHGTEVLYSGVYGTELTCLIFIGP 1027

Query: 3237 VYYQRLRHMVSDKFQVRSTGTVDQITRQPXXXXXXXXXXXFGEMERDSLLAHGAAYLLHD 3416
            VYYQRLRHMVSDKFQVRSTG VD ITRQP           FGEMERDSLLAHGAAYLLHD
Sbjct: 1028 VYYQRLRHMVSDKFQVRSTGQVDHITRQPIKGRKRGGGVRFGEMERDSLLAHGAAYLLHD 1087

Query: 3417 RLHTSSDHHIADVCSLCGSILTTTLIQAQKRAIREIGGLPPARAPKKVMCISCRTSKGME 3596
            RLHTSSDHHIADVCS CGS+LT+++IQ  KRA++ I    PAR PKKV C++CR+SKGME
Sbjct: 1088 RLHTSSDHHIADVCSECGSVLTSSVIQPPKRAVQVILKQLPAREPKKVTCVACRSSKGME 1147

Query: 3597 TVAMPYVFRYLATELAAMNIKMTLQLS 3677
            TVAMPYVF+YLA ELAAMNIKMTL+LS
Sbjct: 1148 TVAMPYVFKYLAAELAAMNIKMTLKLS 1174


>ref|XP_004229596.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like [Solanum
            lycopersicum]
          Length = 1184

 Score = 1868 bits (4838), Expect = 0.0
 Identities = 923/1167 (79%), Positives = 1026/1167 (87%), Gaps = 4/1167 (0%)
 Frame = +3

Query: 189  HLMKEKDYTALADLFRHHIESFDYMVDQGLEIMLNNIKPVEIFNSSTNQKLKISFEKPEV 368
            HL+ EKDY+AL +LF HHIESFDYMVD GLE ML NIKP+EI +S ++ KL+I F KPE+
Sbjct: 18   HLVAEKDYSALKELFSHHIESFDYMVDNGLETMLLNIKPIEIVDSFSSLKLRIWFGKPEL 77

Query: 369  YPPQKERAMRTLPDTLYPFECRQAKISYTGKFLVNICFQYGDEKVKVREKTNFGQFPIML 548
            +PPQKERA + + D LYPFECRQAKISY+GKFLV+ICFQYGD  V +REK NFGQFPIML
Sbjct: 78   FPPQKERASKAMHDALYPFECRQAKISYSGKFLVDICFQYGDGAV-IREKFNFGQFPIML 136

Query: 549  KSKLCHLRGAD-TKKLVSLKEEASEMGGYFILNGLERVVRLLILPKRNYPTSMVRNSFRE 725
            KSKLCHLRGAD +KKLV+ KEE SEMGGYFIL GLERV+RL+ILPKRNYPTSM RNSFR+
Sbjct: 137  KSKLCHLRGADDSKKLVAYKEEPSEMGGYFILKGLERVIRLIILPKRNYPTSMARNSFRD 196

Query: 726  RREGYTDKAVVIRCVREDLSAVTLKLYYLSNGSARLGFWIQGREYLLPVGLVLKALADTS 905
            RREGY+DKAVVIRCVRED SAV+LKLYYL+NGSARLGFWIQGREYLLPVG++LKAL DT+
Sbjct: 197  RREGYSDKAVVIRCVREDQSAVSLKLYYLNNGSARLGFWIQGREYLLPVGIILKALVDTT 256

Query: 906  DHEIYVSLTCCYDEKYDGVKGSVGTQLVGERAKIILDEVHALSLFTREQCLEHIGKHFQP 1085
            DHEIYV+LTCCY+E+ D VKGSVGTQLVGERAKIILDEV ALSLFTR QCL HIG+HFQP
Sbjct: 257  DHEIYVNLTCCYNEECDRVKGSVGTQLVGERAKIILDEVQALSLFTRAQCLRHIGEHFQP 316

Query: 1086 VMVGMEKEKPTAVADAVLEEYIFVHLYNNHDKFNLLLYMLQKLFSLVDQTSVPDNPDSLQ 1265
            V++GM+ +    VADAVL +YIFVHL NNHDKFNLL++MLQKLFSL+DQTSV DNPDSLQ
Sbjct: 317  VVIGMQNDSYKTVADAVLRDYIFVHLDNNHDKFNLLIFMLQKLFSLIDQTSVLDNPDSLQ 376

Query: 1266 NQEILLPGHLITIYLKEKLQEWLLKVKRQLQDETDNNKK-FEFTNLADIKKVIDKNSPKQ 1442
            NQE+LLPGHLITIYLKEKLQ+WLLK++R LQ+ETD  KK FE ++L D+KK I+KN+PKQ
Sbjct: 377  NQEVLLPGHLITIYLKEKLQDWLLKLQRSLQEETDGEKKKFELSSLTDVKKAIEKNAPKQ 436

Query: 1443 ISSAIENMLKTGRLATQSGLDLQQRAGMTVQAERLNFLRFLSHFRAVHRGASFAGLRTTS 1622
            I   IE+MLKTGRLATQSGLDLQQRAGMTVQAE+LNFLRFLSHFRAVHRGASFAGLRTTS
Sbjct: 437  IGLTIESMLKTGRLATQSGLDLQQRAGMTVQAEKLNFLRFLSHFRAVHRGASFAGLRTTS 496

Query: 1623 VRKLLPESWGFLCPVHTPDGEPCGLLNHMTSTCRITSFYDSKGNIRDFFKMRMXXXXXXX 1802
            VRKLLPESWGFLCPVHTPDGEPCGLLNHMT++CRITS+YDSKGN++DFFKMRM       
Sbjct: 497  VRKLLPESWGFLCPVHTPDGEPCGLLNHMTASCRITSYYDSKGNVKDFFKMRMSILNVLI 556

Query: 1803 XXXXXXXXPKLVHAGPPKVLSVLLDGRIVGSIPIEMVEKAVSHLRRLKLSAM--IPEDLE 1976
                    PKLV AGPP++LSVLLDGRI G IP +++EKAV+HLRRLKLS+   IP DLE
Sbjct: 557  AIGMTPSSPKLVQAGPPELLSVLLDGRIAGYIPSDLIEKAVTHLRRLKLSSTSSIPVDLE 616

Query: 1977 VGYVPLSTCGTYPGLYLFTCPSRFIRPVKNISVPSGKENAVELIGPFEQVYMEISCPDGG 2156
            VGY+PLS  G YPGLYLFT PSRF+RPV+NIS P+ + N +ELIGPFEQVYMEISCPDGG
Sbjct: 617  VGYIPLSMNGAYPGLYLFTSPSRFVRPVRNISAPAEEGNDLELIGPFEQVYMEISCPDGG 676

Query: 2157 DGGRKDVFPATHEEIHPTGFLSVVANLTPWSDHNQSPRNMYQCQMGKQTMGFPSQAIHHR 2336
            DGGRK +FPATH EIHPT  LSVV NLTPWSDHNQSPRNMYQCQMGKQTMGF SQA++ R
Sbjct: 677  DGGRKTLFPATHREIHPTNILSVVGNLTPWSDHNQSPRNMYQCQMGKQTMGFSSQALNCR 736

Query: 2337 ADQKLYHLQTPQTPIVRTKAYENYNIDDFPLGTNAIVAVLAYSGYDMEDAMILNKSSVER 2516
            ADQKLYHLQTPQTPIVRTKAYE Y +DD+PLGTNAIVAVLAYSGYDMEDAM+LNKSSV+R
Sbjct: 737  ADQKLYHLQTPQTPIVRTKAYEKYCVDDYPLGTNAIVAVLAYSGYDMEDAMVLNKSSVDR 796

Query: 2517 GMFHGHIYQTETIDLVEQSSKSDRAGRTFRRSNLDKSSRHLIDSDGLPYIGQRIKPDEPY 2696
            GM HGHIYQTETIDL EQS+KSDRA R FRRSNLDKSS  LIDSDGLPY+GQRI P+EPY
Sbjct: 797  GMCHGHIYQTETIDLTEQSAKSDRAQRLFRRSNLDKSSHQLIDSDGLPYVGQRINPNEPY 856

Query: 2697 CSIYNEITSSTCNTKLKGSEPVIVDYVAVDVKNKKNLQKANIRFRRTRNPVIGDKFSSRH 2876
            CSIYNEITS T   KLKGSEPV+VDYVAVDVKNK +LQKANIRFRR+RNPVIGDKFSSRH
Sbjct: 857  CSIYNEITSQTTCMKLKGSEPVVVDYVAVDVKNKAHLQKANIRFRRSRNPVIGDKFSSRH 916

Query: 2877 GQKGVCSQLWSDIDMPFSAVTGMRPDLIINPHAFPSRMTIGMLLESMAAKGGAIHGKFID 3056
            GQKGVCSQLW D+DMPFSAVTGMRPDLIINPHAFPSRMTI MLLES+AAKGGA+HGKF+D
Sbjct: 917  GQKGVCSQLWPDVDMPFSAVTGMRPDLIINPHAFPSRMTIAMLLESIAAKGGALHGKFVD 976

Query: 3057 ATPFGSSPAHASEGQKSESSSLVDELGEMLRAEGFNYHGNEVLYSGVYGTELTCEIFIGP 3236
            ATPF    ++  +  +SESSSLVD+LG ML   GFN+HG EVLYSGVYGTELTC IFIGP
Sbjct: 977  ATPF----SNTMKESESESSSLVDDLGSMLAVCGFNHHGTEVLYSGVYGTELTCRIFIGP 1032

Query: 3237 VYYQRLRHMVSDKFQVRSTGTVDQITRQPXXXXXXXXXXXFGEMERDSLLAHGAAYLLHD 3416
            VYYQRLRHMVSDKFQVRSTG VD ITRQP           FGEMERDSLLAHGA+YLLHD
Sbjct: 1033 VYYQRLRHMVSDKFQVRSTGQVDHITRQPIKGRKRGGGVRFGEMERDSLLAHGASYLLHD 1092

Query: 3417 RLHTSSDHHIADVCSLCGSILTTTLIQAQKRAIREIGGLPPARAPKKVMCISCRTSKGME 3596
            RLHTSSDHHIADVCS CGS+LT+++IQ  KRA++ I    PAR PKKV C++CR+SKGME
Sbjct: 1093 RLHTSSDHHIADVCSECGSVLTSSVIQPPKRAVQAILKQLPAREPKKVTCVACRSSKGME 1152

Query: 3597 TVAMPYVFRYLATELAAMNIKMTLQLS 3677
            TVAMPYVF+YLA ELAAMNIKMTL+LS
Sbjct: 1153 TVAMPYVFKYLAAELAAMNIKMTLKLS 1179


>ref|XP_002263835.2| PREDICTED: DNA-directed RNA polymerase I subunit RPA2 [Vitis
            vinifera]
          Length = 1142

 Score = 1801 bits (4665), Expect = 0.0
 Identities = 892/1159 (76%), Positives = 991/1159 (85%), Gaps = 2/1159 (0%)
 Frame = +3

Query: 207  DYTALADLFRHHIESFDYMVDQGLEIMLNNIKPVEIFNSSTNQKLKISFEKPEVYPPQKE 386
            DY  L +LF+HHI+SFD++V+ GLE +L ++KP                           
Sbjct: 7    DYEPLRELFQHHIDSFDHLVEFGLETLLMSVKP--------------------------- 39

Query: 387  RAMRTLPDTLYPFECRQAKISYTGKFLVNICFQYGDEKVKVREKTNFGQFPIMLKSKLCH 566
            R+ RT+ D LYPFECRQAKISY+GK L ++CFQYG+  V +REK N GQFPIMLKSKLCH
Sbjct: 40   RSARTMRDALYPFECRQAKISYSGKLLADVCFQYGNG-VAIREKFNLGQFPIMLKSKLCH 98

Query: 567  LRGADTKKLVSLKEEASEMGGYFILNGLERVVRLLILPKRNYPTSMVRNSFRERREGYTD 746
            LRGAD +KLVS KEE+SEMGGYFILNGLERVVRLLILPKRNYP SMVRNSFR+RREGYTD
Sbjct: 99   LRGADPQKLVSCKEESSEMGGYFILNGLERVVRLLILPKRNYPMSMVRNSFRDRREGYTD 158

Query: 747  KAVVIRCVREDLSAVTLKLYYLSNGSARLGFWIQGREYLLPVGLVLKALADTSDHEIYVS 926
            KAVVIRCVRED SAVT+KLYYL NGSARLGFWIQGREYLLPVG+VLKAL DT+DHEIY S
Sbjct: 159  KAVVIRCVREDQSAVTVKLYYLRNGSARLGFWIQGREYLLPVGVVLKALIDTTDHEIYES 218

Query: 927  LTCCYDEKYDGVKGSVGTQLVGERAKIILDEVHALSLFTREQCLEHIGKHFQPVMVGMEK 1106
            LTCCY EKY+G KG+VGTQLVGER KIILDEV  LSLFTR QCL+HIG+HFQ VM G+E 
Sbjct: 219  LTCCYSEKYEGGKGAVGTQLVGERVKIILDEVRDLSLFTRHQCLQHIGEHFQLVMDGLEN 278

Query: 1107 EKPTAVADAVLEEYIFVHLYNNHDKFNLLLYMLQKLFSLVDQTSVPDNPDSLQNQEILLP 1286
            E  + VADAVL EYIFVHL NN+DKFNLL++M+QKLFSL+DQTSVPDNPD LQNQE+LLP
Sbjct: 279  ESYSIVADAVLREYIFVHLDNNYDKFNLLIFMVQKLFSLIDQTSVPDNPDVLQNQEVLLP 338

Query: 1287 GHLITIYLKEKLQEWLLKVKRQLQDETDNNKKFEFTNLADIKKVIDKNSPKQISSAIENM 1466
            GHLITIYLKEKLQEWL K +R LQDE +  K FEF++LA +KKV+DKN  +QIS A+ENM
Sbjct: 339  GHLITIYLKEKLQEWLYKARRLLQDEINKRKNFEFSSLAHVKKVMDKNPSRQISLAVENM 398

Query: 1467 LKTGRLATQSGLDLQQRAGMTVQAERLNFLRFLSHFRAVHRGASFAGLRTTSVRKLLPES 1646
            LKTGRL TQSGLDLQQRAGMTVQAERLNFLRFLSHFRAVHRGASFAGLRTTSVRKLLPE+
Sbjct: 399  LKTGRLVTQSGLDLQQRAGMTVQAERLNFLRFLSHFRAVHRGASFAGLRTTSVRKLLPEA 458

Query: 1647 WGFLCPVHTPDGEPCGLLNHMTSTCRITSFYDSKGNIRDFFKMRMXXXXXXXXXXXXXXX 1826
            WGFLCPVHTPDGEPCGLLNHM STCRITS++DS+GN RDFFK+RM               
Sbjct: 459  WGFLCPVHTPDGEPCGLLNHMASTCRITSYFDSRGNTRDFFKIRMSILSVLIGIGMTPAL 518

Query: 1827 PKLVHAGPPKVLSVLLDGRIVGSIPIEMVEKAVSHLRRLKLSAM--IPEDLEVGYVPLST 2000
            PKLV AGPP+VLSV+LDGR+VGSIP   VE AV+HLRRLK+SA+  IP+DLEVGY+PLS 
Sbjct: 519  PKLVQAGPPEVLSVILDGRVVGSIPSSEVETAVNHLRRLKVSAISVIPDDLEVGYIPLSM 578

Query: 2001 CGTYPGLYLFTCPSRFIRPVKNISVPSGKENAVELIGPFEQVYMEISCPDGGDGGRKDVF 2180
             G YPGLYLFT PSRF+RPV+NIS+PS + + +ELIGPFEQVYMEI CPDG DGGR+++F
Sbjct: 579  GGAYPGLYLFTSPSRFVRPVRNISIPSEEGHDIELIGPFEQVYMEIRCPDGSDGGRRNIF 638

Query: 2181 PATHEEIHPTGFLSVVANLTPWSDHNQSPRNMYQCQMGKQTMGFPSQAIHHRADQKLYHL 2360
            PATHEEIHPTG LSVVA+LTPWSDHNQSPRNMYQCQMGKQTM F SQAI+ RADQKLYHL
Sbjct: 639  PATHEEIHPTGMLSVVASLTPWSDHNQSPRNMYQCQMGKQTMAFSSQAINCRADQKLYHL 698

Query: 2361 QTPQTPIVRTKAYENYNIDDFPLGTNAIVAVLAYSGYDMEDAMILNKSSVERGMFHGHIY 2540
            QTPQTPIVRT AY  Y++D+FP GTNAIVAVLAYSGYDMEDAMILNKSSV+RG+ HG IY
Sbjct: 699  QTPQTPIVRTSAYVKYSMDEFPTGTNAIVAVLAYSGYDMEDAMILNKSSVDRGLCHGQIY 758

Query: 2541 QTETIDLVEQSSKSDRAGRTFRRSNLDKSSRHLIDSDGLPYIGQRIKPDEPYCSIYNEIT 2720
            QTETIDL ++++KSDR  R FRRSN+DKS+  LIDSDGLPY+GQ I P+EPYCSIYNE+T
Sbjct: 759  QTETIDLSDENNKSDRGQRMFRRSNVDKSANSLIDSDGLPYVGQMINPNEPYCSIYNEVT 818

Query: 2721 SSTCNTKLKGSEPVIVDYVAVDVKNKKNLQKANIRFRRTRNPVIGDKFSSRHGQKGVCSQ 2900
            SST  TKLKGSEPVIVDYVA+D KNKK+ QK NIRFRR RNP+IGDKFSSRHGQKGVCSQ
Sbjct: 819  SSTRATKLKGSEPVIVDYVALDAKNKKHPQKVNIRFRRPRNPIIGDKFSSRHGQKGVCSQ 878

Query: 2901 LWSDIDMPFSAVTGMRPDLIINPHAFPSRMTIGMLLESMAAKGGAIHGKFIDATPFGSSP 3080
            LW DIDMPFS VTGMRPDLIINPHAFPSRMTI MLLES+AAKGG++HGKF+DATPF  S 
Sbjct: 879  LWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGKFVDATPFSDSL 938

Query: 3081 AHASEGQKSESSSLVDELGEMLRAEGFNYHGNEVLYSGVYGTELTCEIFIGPVYYQRLRH 3260
              A+    SESSSLVDELG ML + GFNYHG EVLYSG YGTELTCEIFIGPVYYQRLRH
Sbjct: 939  RKANGEAGSESSSLVDELGSMLTSYGFNYHGVEVLYSGFYGTELTCEIFIGPVYYQRLRH 998

Query: 3261 MVSDKFQVRSTGTVDQITRQPXXXXXXXXXXXFGEMERDSLLAHGAAYLLHDRLHTSSDH 3440
            MVSDKFQVRSTGTVDQ+TRQP           FGEMERDS+LAHGAAYLLHDRLHT SDH
Sbjct: 999  MVSDKFQVRSTGTVDQVTRQPIKGRKRGGGIRFGEMERDSMLAHGAAYLLHDRLHTCSDH 1058

Query: 3441 HIADVCSLCGSILTTTLIQAQKRAIREIGGLPPARAPKKVMCISCRTSKGMETVAMPYVF 3620
            HIADVCSLCGSILTT++IQ QKRA+REIGGLPP RAPKKV C +C+TSKGMETV+MPY+F
Sbjct: 1059 HIADVCSLCGSILTTSIIQPQKRAVREIGGLPPGRAPKKVTCHACQTSKGMETVSMPYIF 1118

Query: 3621 RYLATELAAMNIKMTLQLS 3677
            R+LA ELAAMNIKMTLQLS
Sbjct: 1119 RFLAAELAAMNIKMTLQLS 1137


>ref|XP_004146776.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like [Cucumis
            sativus]
          Length = 1173

 Score = 1775 bits (4597), Expect = 0.0
 Identities = 865/1164 (74%), Positives = 992/1164 (85%), Gaps = 4/1164 (0%)
 Frame = +3

Query: 198  KEKDYTALADLFRHHIESFDYMVDQGLEIMLNNIKPVEIFNSSTNQKLKISFEKPEVYPP 377
            + +DY AL +LFRHHIESFD++VD GLE ++N+IKPVEI++S TN+KL+I   KPE+YPP
Sbjct: 7    ENEDYEALRELFRHHIESFDHLVDAGLETLMNSIKPVEIYDSFTNKKLRIWLGKPELYPP 66

Query: 378  QKERAMRTLPDTLYPFECRQAKISYTGKFLVNICFQYGDEKVKVREKTNFGQFPIMLKSK 557
            QKER +RT+ + L P+ECRQAKISYTGKF+ ++CFQY DEK  +REK NFGQFPIMLKSK
Sbjct: 67   QKERNLRTIREALLPYECRQAKISYTGKFMADVCFQY-DEKAVIREKFNFGQFPIMLKSK 125

Query: 558  LCHLRGADTKKLVSLKEEASEMGGYFILNGLERVVRLLILPKRNYPTSMVRNSFRERREG 737
            LCHLRG D KKLVS  EEASEMGGYF++NGLERVVRLLI PKRNYPTSMVRNSF +RREG
Sbjct: 126  LCHLRGLDPKKLVSYNEEASEMGGYFVMNGLERVVRLLIAPKRNYPTSMVRNSFSDRREG 185

Query: 738  YTDKAVVIRCVREDLSAVTLKLYYLSNGSARLGFWIQGREYLLPVGLVLKALADTSDHEI 917
            YTDKAVVIRCVRED S+VT+KLYYL NGSARLGFW+QG+EYLLP+G+VLKAL DT+DHEI
Sbjct: 186  YTDKAVVIRCVREDQSSVTVKLYYLRNGSARLGFWVQGKEYLLPIGVVLKALIDTTDHEI 245

Query: 918  YVSLTCCYDEKYDGVKGSVGTQLVGERAKIILDEVHALSLFTREQCLEHIGKHFQPVMVG 1097
            Y SLT CY +K+   KG+VGTQLVGERAKIILDEV  L+LF   QCL+HIG+HFQPVM G
Sbjct: 246  YASLTSCYSDKHGKSKGAVGTQLVGERAKIILDEVRDLALFDHRQCLDHIGQHFQPVMEG 305

Query: 1098 MEKEKPTAVADAVLEEYIFVHLYNNHDKFNLLLYMLQKLFSLVDQTSVPDNPDSLQNQEI 1277
            + KEK + VADAVL++YIFVHL NN+DKFNLL++M QKLFSL+DQTSVPDNPDSLQNQ++
Sbjct: 306  LGKEKFSTVADAVLKDYIFVHLDNNYDKFNLLIFMAQKLFSLIDQTSVPDNPDSLQNQDV 365

Query: 1278 LLPGHLITIYLKEKLQEWLLKVKRQLQDETDN-NKKFEFTNLADIKKVIDKNSPKQISSA 1454
            LLPG LIT+YLKEKL++WL KVK+ L+DE  N +K FEF +LA +KKV+DKN  KQ+SSA
Sbjct: 366  LLPGQLITLYLKEKLEDWLQKVKKLLEDEISNPSKNFEFCSLAHVKKVMDKNPSKQVSSA 425

Query: 1455 IENMLKTGRLATQSGLDLQQRAGMTVQAERLNFLRFLSHFRAVHRGASFAGLRTTSVRKL 1634
            +ENMLKTGRL TQ+GLDLQQRAG TVQAERLNFLRF+SHFRAVHRGASFAGLRTT+VRKL
Sbjct: 426  VENMLKTGRLVTQTGLDLQQRAGFTVQAERLNFLRFVSHFRAVHRGASFAGLRTTTVRKL 485

Query: 1635 LPESWGFLCPVHTPDGEPCGLLNHMTSTCRITSFYDSKGNIRDFFKMRMXXXXXXXXXXX 1814
            LPESWGFLCPVHTPDGEPCGLLNH+TSTCRITS ++S+G +RDF+K+R            
Sbjct: 486  LPESWGFLCPVHTPDGEPCGLLNHLTSTCRITSHFNSQGKVRDFYKIRTSILSVLIAVGM 545

Query: 1815 XXXXPKLVHAGPPKVLSVLLDGRIVGSIPIEMVEKAVSHLRRLKLSA--MIPEDLEVGYV 1988
                PKLV  G P  L+VLLDGRIVG I    VEK V+HLRRLK+ +  +IP+DLEVGYV
Sbjct: 546  IPSLPKLVQMGLPDFLNVLLDGRIVGYISSNEVEKIVAHLRRLKVLSPHVIPDDLEVGYV 605

Query: 1989 PLSTCGTYPGLYLFTCPSRFIRPVKNISVPSGKENAVELIGPFEQVYMEISCPDGGDGGR 2168
            PLS  G YPGLYLFT PSRF+RPVKN+S+     + +ELIGPFEQV+MEI CPDGGDGGR
Sbjct: 606  PLSISGAYPGLYLFTSPSRFVRPVKNLSISPEDNHNIELIGPFEQVFMEIRCPDGGDGGR 665

Query: 2169 KDVFPATHEEIHPTGFLSVVANLTPWSDHNQSPRNMYQCQMGKQTMGFPSQAIHHRADQK 2348
            KD FPATHEEIHPTG LSVVANLTPWSDHNQSPRNMYQCQM KQTM F  QAI +RADQK
Sbjct: 666  KDEFPATHEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSLQAIRYRADQK 725

Query: 2349 LYHLQTPQTPIVRTKAYENYNIDDFPLGTNAIVAVLAYSGYDMEDAMILNKSSVERGMFH 2528
            LYHLQTPQTPIVRT  Y  YNID++P GTNAIVAVLAY+GYDMEDAMILNKSSVERGMFH
Sbjct: 726  LYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGMFH 785

Query: 2529 GHIYQTETIDLVEQSSKSDRAGRTFRRSNLDKSSRHLIDSDGLPYIGQRIKPDEPYCSIY 2708
            G IYQTETIDL +Q ++S R+ + FRRSN+D S R +ID+DGLPY+GQ I+PDEPYCSIY
Sbjct: 786  GQIYQTETIDLSDQGNRSSRSQKMFRRSNIDTSVRSIIDADGLPYVGQMIQPDEPYCSIY 845

Query: 2709 NEITSSTCNTKLKGSEPVIVDYVAVDVKNKKNLQKANIRFRRTRNPVIGDKFSSRHGQKG 2888
            +E+  +T   KLKGSE VIVDYV+VDVKNK N QK NIRFRR RNP+IGDKFSSRHGQKG
Sbjct: 846  DEVAGTTRTMKLKGSEAVIVDYVSVDVKNKNNPQKVNIRFRRPRNPMIGDKFSSRHGQKG 905

Query: 2889 VCSQLWSDIDMPFSAVTGMRPDLIINPHAFPSRMTIGMLLESMAAKGGAIHGKFIDATPF 3068
            VCSQLW D+DMPF   TGMRPDLIINPHAFPSRMTI ML+ES+AAKGG ++G+F++ATPF
Sbjct: 906  VCSQLWPDVDMPFCGATGMRPDLIINPHAFPSRMTIAMLMESVAAKGGCLNGEFVNATPF 965

Query: 3069 GSSPAHASEG-QKSESSSLVDELGEMLRAEGFNYHGNEVLYSGVYGTELTCEIFIGPVYY 3245
             SS    + G +++   +LVDELG  L  +GFNYHG EVLYSGVYGTELTCEIFIGPVYY
Sbjct: 966  RSSVNKTNAGDEETNGETLVDELGSTLIKKGFNYHGLEVLYSGVYGTELTCEIFIGPVYY 1025

Query: 3246 QRLRHMVSDKFQVRSTGTVDQITRQPXXXXXXXXXXXFGEMERDSLLAHGAAYLLHDRLH 3425
            QRLRHMVSDK+QVRSTGTVDQ+TRQP           FGEMERDS+LAHGA+YLLHDRLH
Sbjct: 1026 QRLRHMVSDKYQVRSTGTVDQVTRQPIKGRKKGGGIRFGEMERDSMLAHGASYLLHDRLH 1085

Query: 3426 TSSDHHIADVCSLCGSILTTTLIQAQKRAIREIGGLPPARAPKKVMCISCRTSKGMETVA 3605
            T SDHHIADVCSLCGS+LT++ +Q  KRA+REIGGLPP +APK+V C +C+TSKGMETVA
Sbjct: 1086 TCSDHHIADVCSLCGSVLTSSFVQPPKRAVREIGGLPPGKAPKRVTCHACKTSKGMETVA 1145

Query: 3606 MPYVFRYLATELAAMNIKMTLQLS 3677
            MPYVF+YLA ELAAMNIKMTLQLS
Sbjct: 1146 MPYVFKYLAAELAAMNIKMTLQLS 1169


>ref|XP_003542805.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like isoform X1
            [Glycine max]
          Length = 1175

 Score = 1758 bits (4553), Expect = 0.0
 Identities = 864/1160 (74%), Positives = 981/1160 (84%), Gaps = 3/1160 (0%)
 Frame = +3

Query: 207  DYTALADLFRHHIESFDYMVDQGLEIMLNNIKPVEIFNSSTNQKLKISFEKPEVYPPQKE 386
            D+ AL +LF+HHIESFDYMVD GL+ ML +IKPVE+F+  T+ KL+I  + P +YPPQKE
Sbjct: 10   DFEALRELFKHHIESFDYMVDAGLDTMLGHIKPVEVFDDFTSTKLRIWLDNPVLYPPQKE 69

Query: 387  RAMRTLPDTLYPFECRQAKISYTGKFLVNICFQYGDEKVKVREKTNFGQFPIMLKSKLCH 566
            R  RT+ + L PFECRQAKISY+GK  +++CFQY D  + +RE  NFGQFPIML+SKLC+
Sbjct: 70   RISRTMREALLPFECRQAKISYSGKITIDVCFQYNDGPI-IRENVNFGQFPIMLQSKLCN 128

Query: 567  LRGADTKKLVSLKEEASEMGGYFILNGLERVVRLLILPKRNYPTSMVRNSFRERREGYTD 746
            LRGAD +KLVS KEEASEMGGYFILNGLERVVRLLILPKRNYP SMVRNSF +RREGYTD
Sbjct: 129  LRGADPQKLVSYKEEASEMGGYFILNGLERVVRLLILPKRNYPMSMVRNSFSDRREGYTD 188

Query: 747  KAVVIRCVREDLSAVTLKLYYLSNGSARLGFWIQGREYLLPVGLVLKALADTSDHEIYVS 926
            KAVVIRCVR D S+++++LYYL NGSARLGFW++GREYLLPVG++LKAL DT+D EIYV+
Sbjct: 189  KAVVIRCVRADQSSLSVRLYYLRNGSARLGFWLRGREYLLPVGIILKALIDTTDREIYVN 248

Query: 927  LTCCYDEKYDGVKGSVGTQLVGERAKIILDEVHALSLFTREQCLEHIGKHFQPVMVGMEK 1106
            LT CY+EKY+  KG+VGTQLVGERAKIILDE+  LSLFTR QCLE+IG+HFQPVM  ++ 
Sbjct: 249  LTSCYNEKYEKGKGAVGTQLVGERAKIILDELRDLSLFTRLQCLEYIGEHFQPVMNELKN 308

Query: 1107 EKPTAVADAVLEEYIFVHLYNNHDKFNLLLYMLQKLFSLVDQTSVPDNPDSLQNQEILLP 1286
            +    VADAVL++ I VHL NN DKFNLL++MLQKLFSL+DQTSVPDNPDSLQN E+LLP
Sbjct: 309  DSYPIVADAVLKDCILVHLDNNFDKFNLLIFMLQKLFSLIDQTSVPDNPDSLQNHEVLLP 368

Query: 1287 GHLITIYLKEKLQEWLLKVKRQLQDETDN-NKKFEFTNLADIKKVIDKNSPKQISSAIEN 1463
            GHLIT+YLKEKL++WL K +R L DE D  +KKF+F+++  +KKV+DKNSPKQ+S+A+EN
Sbjct: 369  GHLITLYLKEKLEDWLQKGRRLLLDEIDKKSKKFDFSDIVQVKKVMDKNSPKQVSTAVEN 428

Query: 1464 MLKTGRLATQSGLDLQQRAGMTVQAERLNFLRFLSHFRAVHRGASFAGLRTTSVRKLLPE 1643
            MLKTGRL TQ+GLDLQQRAG TVQAERLNFLRFLSHFRAVHRGASFAGLRTT+VRKLLPE
Sbjct: 429  MLKTGRLVTQTGLDLQQRAGYTVQAERLNFLRFLSHFRAVHRGASFAGLRTTTVRKLLPE 488

Query: 1644 SWGFLCPVHTPDGEPCGLLNHMTSTCRITSFYDSKGNIRDFFKMRMXXXXXXXXXXXXXX 1823
            SWGFLCPVHTPDGEPCGLLNHMT T RITSF+DS+GNI+D+FK++M              
Sbjct: 489  SWGFLCPVHTPDGEPCGLLNHMTCTSRITSFFDSQGNIKDYFKIKMSILNVLLEVGMTPS 548

Query: 1824 XPKLVHAGPPKVLSVLLDGRIVGSIPIEMVEKAVSHLRRLKLS--AMIPEDLEVGYVPLS 1997
             PK+   GPP+ L+VLLDG +VG I    VEK V+H+R LK+S  A+IP+D+EVGYVPLS
Sbjct: 549  LPKIFLPGPPEALTVLLDGCVVGCIASSEVEKVVAHIRELKVSSVAVIPDDMEVGYVPLS 608

Query: 1998 TCGTYPGLYLFTCPSRFIRPVKNISVPSGKENAVELIGPFEQVYMEISCPDGGDGGRKDV 2177
              G YPGLYL T PSRF+RPV+NIS+ S     +ELIGPFEQV+MEI CPDGGDGGRK  
Sbjct: 609  MGGAYPGLYLCTSPSRFVRPVRNISIASDGSENIELIGPFEQVFMEIRCPDGGDGGRKSS 668

Query: 2178 FPATHEEIHPTGFLSVVANLTPWSDHNQSPRNMYQCQMGKQTMGFPSQAIHHRADQKLYH 2357
            FPATHEEIHPT  LSVVANLTPWSDHNQSPRNMYQCQM KQTM F SQ I HRADQKLYH
Sbjct: 669  FPATHEEIHPTVMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSSQTIQHRADQKLYH 728

Query: 2358 LQTPQTPIVRTKAYENYNIDDFPLGTNAIVAVLAYSGYDMEDAMILNKSSVERGMFHGHI 2537
            LQTPQTPIVRT  Y  YNID+FP GTNAIVAVLAY+GYDMEDAMILNKSSVERGMFHG I
Sbjct: 729  LQTPQTPIVRTSTYTKYNIDEFPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGMFHGQI 788

Query: 2538 YQTETIDLVEQSSKSDRAGRTFRRSNLDKSSRHLIDSDGLPYIGQRIKPDEPYCSIYNEI 2717
            YQTETIDL EQ  +SDR+ R FR+SN++KS+   IDSDGLP++GQ I+PDEPYCSIYNE+
Sbjct: 789  YQTETIDLTEQGGRSDRSSRMFRKSNIEKSACPSIDSDGLPHVGQMIRPDEPYCSIYNEV 848

Query: 2718 TSSTCNTKLKGSEPVIVDYVAVDVKNKKNLQKANIRFRRTRNPVIGDKFSSRHGQKGVCS 2897
            TSS    K KGSE V VDYVA DVKNKK+LQK NIRFR  RNPVIGDKFSSRHGQKGVCS
Sbjct: 849  TSSIHTLKRKGSEAVYVDYVAADVKNKKHLQKVNIRFRHPRNPVIGDKFSSRHGQKGVCS 908

Query: 2898 QLWSDIDMPFSAVTGMRPDLIINPHAFPSRMTIGMLLESMAAKGGAIHGKFIDATPFGSS 3077
            QLW D+DMPFS  TGMRPDLIINPHAFPSRMTI MLLES+AAKGG++ G+F+DATPF SS
Sbjct: 909  QLWPDVDMPFSGTTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLRGEFVDATPFRSS 968

Query: 3078 PAHASEGQKSESSSLVDELGEMLRAEGFNYHGNEVLYSGVYGTELTCEIFIGPVYYQRLR 3257
                S    S+S SLVD+LG +LR +GFNYHG EVLYSGVYGTELTCEIFIGPVYYQRLR
Sbjct: 969  VTKDSGESDSKSGSLVDDLGLLLREKGFNYHGLEVLYSGVYGTELTCEIFIGPVYYQRLR 1028

Query: 3258 HMVSDKFQVRSTGTVDQITRQPXXXXXXXXXXXFGEMERDSLLAHGAAYLLHDRLHTSSD 3437
            HMVSDKFQVRSTGT+DQ+TRQP           FGEMERDSLLAHGAAYLLHDRLHT SD
Sbjct: 1029 HMVSDKFQVRSTGTIDQVTRQPIKGRKRGGGIRFGEMERDSLLAHGAAYLLHDRLHTCSD 1088

Query: 3438 HHIADVCSLCGSILTTTLIQAQKRAIREIGGLPPARAPKKVMCISCRTSKGMETVAMPYV 3617
            +HIADVCSLCGS+L TT IQ QKR +REIGGLPP RAPKKV C +C+TSKGMETVAMPYV
Sbjct: 1089 YHIADVCSLCGSMLATTFIQPQKRPVREIGGLPPGRAPKKVTCHACQTSKGMETVAMPYV 1148

Query: 3618 FRYLATELAAMNIKMTLQLS 3677
            FRYLA ELAAMNIKMTL+LS
Sbjct: 1149 FRYLAAELAAMNIKMTLKLS 1168


>emb|CBI35100.3| unnamed protein product [Vitis vinifera]
          Length = 1113

 Score = 1748 bits (4527), Expect = 0.0
 Identities = 867/1116 (77%), Positives = 959/1116 (85%), Gaps = 2/1116 (0%)
 Frame = +3

Query: 336  KLKISFEKPEVYPPQKERAMRTLPDTLYPFECRQAKISYTGKFLVNICFQYGDEKVKVRE 515
            ++ + F +PE+YPPQKER+ RT+ D LYPFECRQAKISY+GK L ++CFQYG+  V +RE
Sbjct: 16   RIALWFGQPELYPPQKERSARTMRDALYPFECRQAKISYSGKLLADVCFQYGNG-VAIRE 74

Query: 516  KTNFGQFPIMLKSKLCHLRGADTKKLVSLKEEASEMGGYFILNGLERVVRLLILPKRNYP 695
            K N GQFPIMLKSKLCHLRGAD +KLVS KEE+SEMGGYFILNGLERVVRLLILPKRNYP
Sbjct: 75   KFNLGQFPIMLKSKLCHLRGADPQKLVSCKEESSEMGGYFILNGLERVVRLLILPKRNYP 134

Query: 696  TSMVRNSFRERREGYTDKAVVIRCVREDLSAVTLKLYYLSNGSARLGFWIQGREYLLPVG 875
             SMVRNSFR+RREGYTDKAVVIRCVRED SAVT+KLYYL NGSARLGFWIQGREYLLPVG
Sbjct: 135  MSMVRNSFRDRREGYTDKAVVIRCVREDQSAVTVKLYYLRNGSARLGFWIQGREYLLPVG 194

Query: 876  LVLKALADTSDHEIYVSLTCCYDEKYDGVKGSVGTQLVGERAKIILDEVHALSLFTREQC 1055
            +VLKAL DT+DHEIY SLTCCY EKY+G KG+VGTQLVGER KIILDEV  LSLFTR QC
Sbjct: 195  VVLKALIDTTDHEIYESLTCCYSEKYEGGKGAVGTQLVGERVKIILDEVRDLSLFTRHQC 254

Query: 1056 LEHIGKHFQPVMVGMEKEKPTAVADAVLEEYIFVHLYNNHDKFNLLLYMLQKLFSLVDQT 1235
            L+HIG+HFQ VM G+E E  + VADAVL EYIFVHL NN+DKFNLL++M+QKLFSL+DQT
Sbjct: 255  LQHIGEHFQLVMDGLENESYSIVADAVLREYIFVHLDNNYDKFNLLIFMVQKLFSLIDQT 314

Query: 1236 SVPDNPDSLQNQEILLPGHLITIYLKEKLQEWLLKVKRQLQDETDNNKKFEFTNLADIKK 1415
            SVPDNPD LQNQE+LLPGHLITIYLKEKLQEWL K +R LQDE +  K FEF++LA +KK
Sbjct: 315  SVPDNPDVLQNQEVLLPGHLITIYLKEKLQEWLYKARRLLQDEINKRKNFEFSSLAHVKK 374

Query: 1416 VIDKNSPKQISSAIENMLKTGRLATQSGLDLQQRAGMTVQAERLNFLRFLSHFRAVHRGA 1595
            V+DKN  +QIS A+ENMLKTGRL TQSGLDLQQRAGMTVQAERLNFLRFLSHFRAVHRGA
Sbjct: 375  VMDKNPSRQISLAVENMLKTGRLVTQSGLDLQQRAGMTVQAERLNFLRFLSHFRAVHRGA 434

Query: 1596 SFAGLRTTSVRKLLPESWGFLCPVHTPDGEPCGLLNHMTSTCRITSFYDSKGNIRDFFKM 1775
            SFAGLRTTSVRKLLPE+WGFLCPVHTPDGEPCGLLNHM STCRITS++DS+GN RDFFK+
Sbjct: 435  SFAGLRTTSVRKLLPEAWGFLCPVHTPDGEPCGLLNHMASTCRITSYFDSRGNTRDFFKI 494

Query: 1776 RMXXXXXXXXXXXXXXXPKLVHAGPPKVLSVLLDGRIVGSIPIEMVEKAVSHLRRLKLSA 1955
            RM               PKLV AGPP+VLSV+LDGR+VGSIP   VE AV+HLRRLK+SA
Sbjct: 495  RMSILSVLIGIGMTPALPKLVQAGPPEVLSVILDGRVVGSIPSSEVETAVNHLRRLKVSA 554

Query: 1956 M--IPEDLEVGYVPLSTCGTYPGLYLFTCPSRFIRPVKNISVPSGKENAVELIGPFEQVY 2129
            +  IP+DLEVGY+PLS  G YPGLYLFT PSRF+RPV+NIS+PS + + +ELIGPFEQVY
Sbjct: 555  ISVIPDDLEVGYIPLSMGGAYPGLYLFTSPSRFVRPVRNISIPSEEGHDIELIGPFEQVY 614

Query: 2130 MEISCPDGGDGGRKDVFPATHEEIHPTGFLSVVANLTPWSDHNQSPRNMYQCQMGKQTMG 2309
            MEI CPDG DGGR+++FPATHEEIHPTG LSVVA+LTPWSDHNQSPRNMYQCQMGKQTM 
Sbjct: 615  MEIRCPDGSDGGRRNIFPATHEEIHPTGMLSVVASLTPWSDHNQSPRNMYQCQMGKQTMA 674

Query: 2310 FPSQAIHHRADQKLYHLQTPQTPIVRTKAYENYNIDDFPLGTNAIVAVLAYSGYDMEDAM 2489
            F SQAI+ RADQKLYHLQTPQTPIVRT AY  Y++D+FP GTNAIVAVLAYSGYDMEDAM
Sbjct: 675  FSSQAINCRADQKLYHLQTPQTPIVRTSAYVKYSMDEFPTGTNAIVAVLAYSGYDMEDAM 734

Query: 2490 ILNKSSVERGMFHGHIYQTETIDLVEQSSKSDRAGRTFRRSNLDKSSRHLIDSDGLPYIG 2669
            ILNKSSV+RG+ HG IYQTETIDL ++++KSDR  R FRRSN+DKS+  LIDSDGLPY+G
Sbjct: 735  ILNKSSVDRGLCHGQIYQTETIDLSDENNKSDRGQRMFRRSNVDKSANSLIDSDGLPYVG 794

Query: 2670 QRIKPDEPYCSIYNEITSSTCNTKLKGSEPVIVDYVAVDVKNKKNLQKANIRFRRTRNPV 2849
            Q I P+EPYCSIYNE+TSST  TKLKGSEPVIVDYVA+D KNKK+ QK NIRFRR RNP+
Sbjct: 795  QMINPNEPYCSIYNEVTSSTRATKLKGSEPVIVDYVALDAKNKKHPQKVNIRFRRPRNPI 854

Query: 2850 IGDKFSSRHGQKGVCSQLWSDIDMPFSAVTGMRPDLIINPHAFPSRMTIGMLLESMAAKG 3029
            IGDKFSSRHGQKGVCSQLW DIDMPFS VTGMRPDLIINPHAFPSRMTI MLLES+AAKG
Sbjct: 855  IGDKFSSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESVAAKG 914

Query: 3030 GAIHGKFIDATPFGSSPAHASEGQKSESSSLVDELGEMLRAEGFNYHGNEVLYSGVYGTE 3209
            G++HGKF+DATPF  S   A+    SESSSLVDELG ML + GFNYHG EVLYSG YGTE
Sbjct: 915  GSLHGKFVDATPFSDSLRKANGEAGSESSSLVDELGSMLTSYGFNYHGVEVLYSGFYGTE 974

Query: 3210 LTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQITRQPXXXXXXXXXXXFGEMERDSLLA 3389
            LTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQ+TRQP           FGEMERDS+LA
Sbjct: 975  LTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPIKGRKRGGGIRFGEMERDSMLA 1034

Query: 3390 HGAAYLLHDRLHTSSDHHIADVCSLCGSILTTTLIQAQKRAIREIGGLPPARAPKKVMCI 3569
            HGAAYLLHDRLHT SDHHIADVCSLCGSILTT++IQ QKRA                   
Sbjct: 1035 HGAAYLLHDRLHTCSDHHIADVCSLCGSILTTSIIQPQKRA------------------- 1075

Query: 3570 SCRTSKGMETVAMPYVFRYLATELAAMNIKMTLQLS 3677
               TSKGMETV+MPY+FR+LA ELAAMNIKMTLQLS
Sbjct: 1076 ---TSKGMETVSMPYIFRFLAAELAAMNIKMTLQLS 1108


>gb|EOY19647.1| Nuclear RNA polymerase A2 isoform 2 [Theobroma cacao]
          Length = 1180

 Score = 1747 bits (4525), Expect = 0.0
 Identities = 856/1156 (74%), Positives = 980/1156 (84%), Gaps = 3/1156 (0%)
 Frame = +3

Query: 219  LADLFRHHIESFDYMVDQGLEIMLNNIKPVEIFNSSTNQKLKISFEKPEVYPPQKERAMR 398
            L +LF+HHIESFDYM+D+GL++ML  +KPV+IF+SS+N+ L+I  + PEVYPPQK+R+ +
Sbjct: 21   LKELFKHHIESFDYMIDEGLDLMLKRVKPVQIFDSSSNKTLRIWLDHPEVYPPQKDRSSK 80

Query: 399  TLPDTLYPFECRQAKISYTGKFLVNICFQYGDEKVKVREKTNFGQFPIMLKSKLCHLRGA 578
            T    LYPFECRQAKISYTG F +++CFQ+ D  V VREK NFG+FPIMLKSK C+LR A
Sbjct: 81   TSAGALYPFECRQAKISYTGSFHIDVCFQW-DGGVVVREKLNFGEFPIMLKSKRCYLREA 139

Query: 579  DTKKLVSLKEEASEMGGYFILNGLERVVRLLILPKRNYPTSMVRNSFRERREGYTDKAVV 758
            D +KLV+ KEE+ EMGGYFILNGLERVVRLLILPKRNYP S+VRNSFR+RREGYTDKAVV
Sbjct: 140  DPRKLVACKEESREMGGYFILNGLERVVRLLILPKRNYPMSLVRNSFRDRREGYTDKAVV 199

Query: 759  IRCVREDLSAVTLKLYYLSNGSARLGFWIQGREYLLPVGLVLKALADTSDHEIYVSLTCC 938
            IRCVR DLS+VT+KLYYL NGSARLGFW+QGREY+LPVG++LKAL DT+D EIY  LTCC
Sbjct: 200  IRCVRGDLSSVTVKLYYLHNGSARLGFWVQGREYMLPVGIILKALIDTNDREIYTKLTCC 259

Query: 939  YDEKYDGVKGSVGTQLVGERAKIILDEVHALSLFTREQCLEHIGKHFQPVMVGMEKEKPT 1118
            Y+EK    KG+VGTQLVGERAKIILDEV  L+LFT+EQCL+HIG+HFQP+M GME E  +
Sbjct: 260  YNEKNGEGKGAVGTQLVGERAKIILDEVQHLALFTQEQCLQHIGEHFQPIMEGMESESYS 319

Query: 1119 AVADAVLEEYIFVHLYNNHDKFNLLLYMLQKLFSLVDQTSVPDNPDSLQNQEILLPGHLI 1298
             VAD VL  YIFVHL +N+DKFNLL++M+QKLFSL+DQTS PDN DSLQNQE+LLPGHLI
Sbjct: 320  TVADVVLRNYIFVHLDDNNDKFNLLIFMVQKLFSLIDQTSAPDNSDSLQNQEVLLPGHLI 379

Query: 1299 TIYLKEKLQEWLLKVKRQLQDETDN-NKKFEFTNLADIKKVIDKNSPKQISSAIENMLKT 1475
            TIYLKEKL++WL K K+ ++D  +N +K F+F ++ D+KKV++KN P Q+S+AIEN+LKT
Sbjct: 380  TIYLKEKLEDWLRKGKKLIEDAINNKSKNFDFCSMKDVKKVMEKNRPTQVSAAIENLLKT 439

Query: 1476 GRLATQSGLDLQQRAGMTVQAERLNFLRFLSHFRAVHRGASFAGLRTTSVRKLLPESWGF 1655
            GRL TQ+GLDLQQRAG TVQAERLN+ RFLS FR VHRGASFAGLRTTSVRKLLPESWGF
Sbjct: 440  GRLITQTGLDLQQRAGFTVQAERLNYHRFLSFFRCVHRGASFAGLRTTSVRKLLPESWGF 499

Query: 1656 LCPVHTPDGEPCGLLNHMTSTCRITSFYDSKGNIRDFFKMRMXXXXXXXXXXXXXXXPKL 1835
            LCPVHTPDGEPCGLLNHMT TCRITS+Y+S GNIRDFFK+RM               PK+
Sbjct: 500  LCPVHTPDGEPCGLLNHMTCTCRITSYYNSPGNIRDFFKIRMSILDVLVGVGMTTSWPKV 559

Query: 1836 VHAGPPKVLSVLLDGRIVGSIPIEMVEKAVSHLRRLKLSA--MIPEDLEVGYVPLSTCGT 2009
             HAGPP+VL VLLDGR+VGS+P    EK V+HLRRLKL+A  +IP+DLEVGYVPLS  GT
Sbjct: 560  DHAGPPQVLPVLLDGRVVGSLPSGEAEKVVAHLRRLKLAAASVIPDDLEVGYVPLSLGGT 619

Query: 2010 YPGLYLFTCPSRFIRPVKNISVPSGKENAVELIGPFEQVYMEISCPDGGDGGRKDVFPAT 2189
            YPGLYLFT PSRF+RPV+NIS+PS     +ELIGPFEQV+MEI CPDGG+GGR ++FPAT
Sbjct: 620  YPGLYLFTSPSRFVRPVRNISIPSADGKDIELIGPFEQVFMEIRCPDGGNGGRSNIFPAT 679

Query: 2190 HEEIHPTGFLSVVANLTPWSDHNQSPRNMYQCQMGKQTMGFPSQAIHHRADQKLYHLQTP 2369
            HEEI PT  LSVVANLTPWSDHNQSPRNMYQCQM KQTM F  QAI+ RADQKLYHLQTP
Sbjct: 680  HEEISPTAMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSLQAINARADQKLYHLQTP 739

Query: 2370 QTPIVRTKAYENYNIDDFPLGTNAIVAVLAYSGYDMEDAMILNKSSVERGMFHGHIYQTE 2549
            QTPIVRTK Y  Y +D++P GTNAIVAVLAY+GYDMEDAMILNKSSVERGM HG IYQTE
Sbjct: 740  QTPIVRTKTYTKYCMDEYPSGTNAIVAVLAYTGYDMEDAMILNKSSVERGMCHGQIYQTE 799

Query: 2550 TIDLVEQSSKSDRAGRTFRRSNLDKSSRHLIDSDGLPYIGQRIKPDEPYCSIYNEITSST 2729
            TIDL +  SKSDR  R F+R + D+S    +DSDGLP++GQ I+P+EPYCS  N++T+S 
Sbjct: 800  TIDLGDDKSKSDRGQRIFKREHSDRSISSCLDSDGLPHVGQVIRPNEPYCSTINQVTNSK 859

Query: 2730 CNTKLKGSEPVIVDYVAVDVKNKKNLQKANIRFRRTRNPVIGDKFSSRHGQKGVCSQLWS 2909
                 KGSE VIVDYVAVD K+KK+LQKANIRFR  RNPVIGDKFSSRHGQKGVCSQLW 
Sbjct: 860  RLYNHKGSETVIVDYVAVDTKSKKHLQKANIRFRHPRNPVIGDKFSSRHGQKGVCSQLWP 919

Query: 2910 DIDMPFSAVTGMRPDLIINPHAFPSRMTIGMLLESMAAKGGAIHGKFIDATPFGSSPAHA 3089
            DIDMPFS VTGMRPDLIINPHAFPSRMTI MLLES+AAKGG++HGKF+DATPF  S   A
Sbjct: 920  DIDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGKFVDATPFSDSVKEA 979

Query: 3090 SEGQKSESSSLVDELGEMLRAEGFNYHGNEVLYSGVYGTELTCEIFIGPVYYQRLRHMVS 3269
                ++ES SLVDELG MLRA GFNYHG EVLYSGVYGTELTCEIFIGPVYYQRLRHMVS
Sbjct: 980  KGKTEAESESLVDELGSMLRARGFNYHGVEVLYSGVYGTELTCEIFIGPVYYQRLRHMVS 1039

Query: 3270 DKFQVRSTGTVDQITRQPXXXXXXXXXXXFGEMERDSLLAHGAAYLLHDRLHTSSDHHIA 3449
            DK+QVR+TG VDQITRQP           FGEMERD++LAHGAAYLLHDRLHT SD+HIA
Sbjct: 1040 DKYQVRATGQVDQITRQPIKGRKRGGGIRFGEMERDAMLAHGAAYLLHDRLHTCSDYHIA 1099

Query: 3450 DVCSLCGSILTTTLIQAQKRAIREIGGLPPARAPKKVMCISCRTSKGMETVAMPYVFRYL 3629
            DVCSLCGSILTT+++Q  KR +REIGGLPPARAPKKV C +C+TSKGMETVAMPYVFRYL
Sbjct: 1100 DVCSLCGSILTTSIVQPPKRVVREIGGLPPARAPKKVTCHACQTSKGMETVAMPYVFRYL 1159

Query: 3630 ATELAAMNIKMTLQLS 3677
            A ELAAMNI MT+QL+
Sbjct: 1160 AAELAAMNITMTIQLN 1175


>ref|XP_003550091.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2-like
            isoform X1 [Glycine max]
          Length = 1175

 Score = 1747 bits (4525), Expect = 0.0
 Identities = 855/1160 (73%), Positives = 977/1160 (84%), Gaps = 3/1160 (0%)
 Frame = +3

Query: 207  DYTALADLFRHHIESFDYMVDQGLEIMLNNIKPVEIFNSSTNQKLKISFEKPEVYPPQKE 386
            D+ AL +LF+HHIESFDYM D GLE ML +IKP+E+F+  T+ KL+I  + P +YPPQKE
Sbjct: 10   DFEALRELFKHHIESFDYMADAGLETMLRHIKPIEVFDDFTSTKLRIWLDNPVLYPPQKE 69

Query: 387  RAMRTLPDTLYPFECRQAKISYTGKFLVNICFQYGDEKVKVREKTNFGQFPIMLKSKLCH 566
            R  RT+ + L PFECRQAKISY GK  +++CFQY D  + +RE  NFGQFPIML+SKLC+
Sbjct: 70   RISRTMREALLPFECRQAKISYAGKITIDVCFQYNDGPI-IRENINFGQFPIMLQSKLCN 128

Query: 567  LRGADTKKLVSLKEEASEMGGYFILNGLERVVRLLILPKRNYPTSMVRNSFRERREGYTD 746
            LRGAD +KLVS +EEASEMGGYFILNGLERV+RLLILPKRN+P SMVRNSF +RREGYTD
Sbjct: 129  LRGADPQKLVSYREEASEMGGYFILNGLERVIRLLILPKRNHPMSMVRNSFSDRREGYTD 188

Query: 747  KAVVIRCVREDLSAVTLKLYYLSNGSARLGFWIQGREYLLPVGLVLKALADTSDHEIYVS 926
            KA+VIRCVR D S+++++LYYL NGSARLGFW++GREYLLPVG++LKAL DT+D EIYV+
Sbjct: 189  KAIVIRCVRADQSSLSVRLYYLRNGSARLGFWLRGREYLLPVGIILKALIDTTDREIYVN 248

Query: 927  LTCCYDEKYDGVKGSVGTQLVGERAKIILDEVHALSLFTREQCLEHIGKHFQPVMVGMEK 1106
            LT CY+EKY+  KG+VGTQLVGERAKIILDE+  LSLFTR QCLE+IG+HFQPV+  ++ 
Sbjct: 249  LTSCYNEKYEKGKGAVGTQLVGERAKIILDELRDLSLFTRLQCLEYIGEHFQPVITELKN 308

Query: 1107 EKPTAVADAVLEEYIFVHLYNNHDKFNLLLYMLQKLFSLVDQTSVPDNPDSLQNQEILLP 1286
            +    VA+AVL++ I VHL NN DKFNLL++MLQKLFSL+DQTSVPDNPDSLQN E+LLP
Sbjct: 309  DSYPIVAEAVLKDCILVHLDNNFDKFNLLIFMLQKLFSLIDQTSVPDNPDSLQNHEVLLP 368

Query: 1287 GHLITIYLKEKLQEWLLKVKRQLQDETDN-NKKFEFTNLADIKKVIDKNSPKQISSAIEN 1463
            GHLIT+YLKEKL++WL K KR L DE D  +KKF+F+++  +KKV+DKNSPKQ+S+A+EN
Sbjct: 369  GHLITLYLKEKLEDWLQKGKRLLLDEIDKKSKKFDFSDIVQVKKVMDKNSPKQVSTAVEN 428

Query: 1464 MLKTGRLATQSGLDLQQRAGMTVQAERLNFLRFLSHFRAVHRGASFAGLRTTSVRKLLPE 1643
            MLKTGRL TQ+GLDLQQRAG TVQAERLNFLRF+SHFRAVHRGASFAGLRTT+VRKLLPE
Sbjct: 429  MLKTGRLVTQTGLDLQQRAGYTVQAERLNFLRFVSHFRAVHRGASFAGLRTTTVRKLLPE 488

Query: 1644 SWGFLCPVHTPDGEPCGLLNHMTSTCRITSFYDSKGNIRDFFKMRMXXXXXXXXXXXXXX 1823
            SWGFLCPVHTPDGEPCGLLNHMT T RITSF+DS+GN++D+FK++M              
Sbjct: 489  SWGFLCPVHTPDGEPCGLLNHMTCTSRITSFFDSQGNVKDYFKIKMSILNVLLEVGMTPS 548

Query: 1824 XPKLVHAGPPKVLSVLLDGRIVGSIPIEMVEKAVSHLRRLKLS--AMIPEDLEVGYVPLS 1997
             PK+   GPP+ L+VLLDG +VG I     EK V+H+R LK+S  A+IP+D+EVGYVPLS
Sbjct: 549  LPKIFLPGPPEALTVLLDGCVVGCIASSEAEKVVAHIRELKVSSAAVIPDDMEVGYVPLS 608

Query: 1998 TCGTYPGLYLFTCPSRFIRPVKNISVPSGKENAVELIGPFEQVYMEISCPDGGDGGRKDV 2177
              G YPGLYL T PSRF+RPV+NIS+PS     +E IGPFEQV+MEI CPDGGDGGRK  
Sbjct: 609  MGGAYPGLYLCTSPSRFVRPVRNISIPSNGSENIEFIGPFEQVFMEIRCPDGGDGGRKSS 668

Query: 2178 FPATHEEIHPTGFLSVVANLTPWSDHNQSPRNMYQCQMGKQTMGFPSQAIHHRADQKLYH 2357
            FPATHEEIHPT  LSVVANLTPWSDHNQSPRNMYQCQM KQTM F SQ I HRADQKLYH
Sbjct: 669  FPATHEEIHPTVMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSSQTIQHRADQKLYH 728

Query: 2358 LQTPQTPIVRTKAYENYNIDDFPLGTNAIVAVLAYSGYDMEDAMILNKSSVERGMFHGHI 2537
            LQTPQTPIVRT  Y  YNID+FP GTNAIVAVLAY+GYDMEDAMILNKSSVERGMFHG I
Sbjct: 729  LQTPQTPIVRTSTYTKYNIDEFPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGMFHGQI 788

Query: 2538 YQTETIDLVEQSSKSDRAGRTFRRSNLDKSSRHLIDSDGLPYIGQRIKPDEPYCSIYNEI 2717
            YQTETIDL EQ  + DR+ R FR+SNL+KS+   IDSDGLP++GQ I+PDEPYCSIYNE+
Sbjct: 789  YQTETIDLTEQGGRLDRSSRMFRKSNLEKSACPSIDSDGLPHVGQMIRPDEPYCSIYNEV 848

Query: 2718 TSSTCNTKLKGSEPVIVDYVAVDVKNKKNLQKANIRFRRTRNPVIGDKFSSRHGQKGVCS 2897
            TSS    K KGSE V VDYVAVDVKNKK+LQK NIRFR  RNPVIGDKFSSRHGQKGVCS
Sbjct: 849  TSSIHTLKRKGSEAVYVDYVAVDVKNKKHLQKVNIRFRHPRNPVIGDKFSSRHGQKGVCS 908

Query: 2898 QLWSDIDMPFSAVTGMRPDLIINPHAFPSRMTIGMLLESMAAKGGAIHGKFIDATPFGSS 3077
            QLW D+DMPFS  TGMRPDLIINPHAFPSRMTI MLLES+AAKGG++ G+F+DATPF SS
Sbjct: 909  QLWPDVDMPFSGNTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLRGEFVDATPFRSS 968

Query: 3078 PAHASEGQKSESSSLVDELGEMLRAEGFNYHGNEVLYSGVYGTELTCEIFIGPVYYQRLR 3257
                S    S S S+VD+LG +LR +GFNYHG EVLYSGVYGTELTCEIFIGPVYYQRLR
Sbjct: 969  VKKDSGESDSMSGSIVDDLGLLLREKGFNYHGLEVLYSGVYGTELTCEIFIGPVYYQRLR 1028

Query: 3258 HMVSDKFQVRSTGTVDQITRQPXXXXXXXXXXXFGEMERDSLLAHGAAYLLHDRLHTSSD 3437
            HMVSDKFQVRSTGT+DQ+TRQP           FGEMERDSLLAHGAAYLLHDRLHT SD
Sbjct: 1029 HMVSDKFQVRSTGTIDQVTRQPIKGRKRGGGIRFGEMERDSLLAHGAAYLLHDRLHTCSD 1088

Query: 3438 HHIADVCSLCGSILTTTLIQAQKRAIREIGGLPPARAPKKVMCISCRTSKGMETVAMPYV 3617
            +HIADVCSLCGS+LTTT  Q QKR +REIGGLPP RAPKKV C +C+TSKGMETVAMPYV
Sbjct: 1089 YHIADVCSLCGSMLTTTFTQPQKRPVREIGGLPPGRAPKKVTCHACQTSKGMETVAMPYV 1148

Query: 3618 FRYLATELAAMNIKMTLQLS 3677
            FRYLA ELAAMNIKMTL+LS
Sbjct: 1149 FRYLAAELAAMNIKMTLKLS 1168


>gb|ESW05690.1| hypothetical protein PHAVU_011G201300g [Phaseolus vulgaris]
          Length = 1180

 Score = 1728 bits (4475), Expect = 0.0
 Identities = 850/1165 (72%), Positives = 974/1165 (83%), Gaps = 8/1165 (0%)
 Frame = +3

Query: 207  DYTALADLFRHHIESFDYMVDQGLEIMLNNIKPVEIFNSSTNQKLKISFEKPEVYPPQKE 386
            D+ AL +LF+HHIESFD+MV  GLE  L +IKP+E+ +  T  KL+I  E P VYPPQKE
Sbjct: 10   DFEALRELFKHHIESFDHMVKAGLETTLLHIKPIEVLDDFTTTKLRIWLENPVVYPPQKE 69

Query: 387  RAMRTLPDTLYPFECRQAKISYTGKFLVNICFQYGDEKVKVREKTNFGQFPIMLKSKLCH 566
            R  +T+ + L PFECRQAKISY GK  +++CFQY D  V +RE  NFGQFPIML+SKLC+
Sbjct: 70   RISKTMREALLPFECRQAKISYAGKITIDVCFQYNDGPV-IRENVNFGQFPIMLQSKLCN 128

Query: 567  LRGADTKKLVSLKEEASEMGGYFILNGLERVVRLLILPKRNYPTSMVRNSFRERREGYTD 746
            LRGAD KKLVS KEEASEMGGYFILNGLERV+RLLILPKRNYP SMVR+SF +RREGYTD
Sbjct: 129  LRGADPKKLVSCKEEASEMGGYFILNGLERVIRLLILPKRNYPMSMVRSSFCDRREGYTD 188

Query: 747  KAVVIRCVREDLSAVTLKLYYLSNGSARLGFWIQGREYLLPVGLVLKALADTSDHEIYVS 926
            KAVVIRCVR D S+++++LYYL NGSARLGFW++GREYLLPVG+VLKAL DT+D EIYV+
Sbjct: 189  KAVVIRCVRADQSSLSIRLYYLRNGSARLGFWLRGREYLLPVGIVLKALIDTTDREIYVN 248

Query: 927  LTCCYDEKYDGVKGSVGTQLVGERAKIILDEVHALSLFTREQCLEHIGKHFQPVMVGMEK 1106
            LT CY+EKY   KG+VGTQLVGERAKIILDE+  LSLFTR QCLE+IG+HFQP+M  + K
Sbjct: 249  LTSCYNEKYAKGKGAVGTQLVGERAKIILDELRDLSLFTRRQCLEYIGEHFQPIMPELMK 308

Query: 1107 EKPTAVADAVLEEYIFVHLYNNHDKFNLLLYMLQKLFSLVDQTSVPDNPDSLQNQEILLP 1286
            +    VADAVL++ I VHL N+ DKFNLL++MLQKLFSL+DQTSVPDNPDSLQN E+LLP
Sbjct: 309  DSYAIVADAVLKDCILVHLDNDFDKFNLLIFMLQKLFSLIDQTSVPDNPDSLQNHEVLLP 368

Query: 1287 GHLITIYLKEKLQEWLLKVKRQLQDETDN-NKKFEFTNLADIKKVIDKNSPKQISSAIEN 1463
            GHLI++Y+KEKL++WL K K+ L DE    + KF+F+++A +KK++DKNS K +S+++EN
Sbjct: 369  GHLISLYIKEKLEDWLQKGKKLLMDEIQKKSNKFDFSDIAQVKKIMDKNSAKLVSASVEN 428

Query: 1464 MLKTGRLATQSGLDLQQRAGMTVQAERLNFLRFLSHFRAVHRGASFAGLRTTSVRKLLPE 1643
            +LKTGRL TQ+GLDLQQRAG TVQAERLNFLRF+SHFRAVHRGASFAGLRTT+VRKLLPE
Sbjct: 429  LLKTGRLVTQTGLDLQQRAGYTVQAERLNFLRFMSHFRAVHRGASFAGLRTTTVRKLLPE 488

Query: 1644 SWGFLCPVHTPDGEPCGLLNHMTSTCRITSFYDSKGNIRDFFKMRMXXXXXXXXXXXXXX 1823
            SWGFLCPVHTPDGEPCGLLNHMT TCRITSF+DS+GNI+D+FK++               
Sbjct: 489  SWGFLCPVHTPDGEPCGLLNHMTRTCRITSFFDSQGNIKDYFKIQKSIRDILMEVGMTSS 548

Query: 1824 XPKLVHAGPPKVLSVLLDGRIVGSIPIEMVEKAVSHLRRLKLSA--MIPEDLEVGYVPLS 1997
             PK+   GPP+ L+VLLDG +VG I    VEK V+++R LK+S+  +IP D+EVGYVPLS
Sbjct: 549  LPKIFLPGPPEALTVLLDGCVVGCIASSEVEKVVAYIRELKVSSASVIPGDMEVGYVPLS 608

Query: 1998 TCGTYPGLYLFTCPSRFIRPVKNISVPSGKENAVELIGPFEQVYMEISCPDGGDGGRKDV 2177
              G YPGLYLFT PSRF+RPVKNIS+PS    ++ELIGPFEQV+MEI C DGGDGGRK  
Sbjct: 609  MGGAYPGLYLFTSPSRFVRPVKNISIPSNGSESIELIGPFEQVFMEIRCLDGGDGGRKSS 668

Query: 2178 FPATHEEIHPTGFLSVVANLTPWSDHNQSPRNMYQCQMGKQTMGFPSQAIHHRADQKLYH 2357
            FPATHEEIHPT  LSVVANLTPWSDHNQSPRNMYQCQM KQTM F SQ I HRADQKLYH
Sbjct: 669  FPATHEEIHPTEMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSSQTIQHRADQKLYH 728

Query: 2358 LQTPQTPIVRTKAYENYNIDDFPLGTNAIVAVLAYSGYDMEDAMILNKSSVERGMFHGHI 2537
            LQTPQTPIVRT  Y  YNID+FP GTNAIVAVLAY+GYDMEDAMILNKSSVERGMFHG I
Sbjct: 729  LQTPQTPIVRTSTYTKYNIDEFPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGMFHGQI 788

Query: 2538 YQTETIDLVEQSSKSDRAGRTFRRSNLDKSSRHLIDSDGLPYIGQRIKPDEPYCSIYNEI 2717
            YQTETIDL EQ  KSDR+ R FR+SN++K     IDSDGLP++GQ I+PDEPYCSIYNE+
Sbjct: 789  YQTETIDLTEQRGKSDRSSRIFRKSNVEKLGCPSIDSDGLPHVGQMIRPDEPYCSIYNEV 848

Query: 2718 TSSTCNTKLKGSEPVIVDYVAVDVKNKKNLQKANIRFRRTRNPVIGDKFSSRHGQKGVCS 2897
            TSST   K KGSE V VDYVAVDVKNKK++QK NIRFR  RNPVIGDKFSSRHGQKGVCS
Sbjct: 849  TSSTQTYKRKGSEAVYVDYVAVDVKNKKHIQKVNIRFRHPRNPVIGDKFSSRHGQKGVCS 908

Query: 2898 QLWSDIDMPFSAVTGMRPDLIINPHAFPSRMTIGMLLESMAAKGGAIHGKFIDATPFGSS 3077
            QLW D+DMPFS  TGMRPDLIINPHAFPSRMTI MLLES+AAKGG++ G+F+DATPF SS
Sbjct: 909  QLWPDVDMPFSGNTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLRGEFVDATPFRSS 968

Query: 3078 PAHASEGQKSESSSLVDELGEMLRAEGFNYHGNEVLYSGVYGTELTCEIFIGPVYYQRLR 3257
                 EG  S+S SLVD+LG +L+ +GFNYHG EVLYSGVYGTELTCEIFIGPVYYQRLR
Sbjct: 969  TKKDGEGSDSKSGSLVDDLGVLLKEKGFNYHGLEVLYSGVYGTELTCEIFIGPVYYQRLR 1028

Query: 3258 HMVSDKFQVRSTGTVDQITRQPXXXXXXXXXXXFGEMERDSLLAHGAAYLLHDRLHTSSD 3437
            HMVSDKFQVRSTGT+DQ+TRQP           FGEMERDSLLAHGAAYLLHDRLHT SD
Sbjct: 1029 HMVSDKFQVRSTGTIDQVTRQPIKGRKRGGGIRFGEMERDSLLAHGAAYLLHDRLHTCSD 1088

Query: 3438 HHIADVCSLCGSILTTTLIQAQKRAIREIGGLPPARAP-----KKVMCISCRTSKGMETV 3602
            +HIADVCSLCGS+L+TT IQ QKR +R+IGGLPP R P     KKV C +C+TSKGMETV
Sbjct: 1089 YHIADVCSLCGSMLSTTFIQPQKRPVRQIGGLPPGRLPPGRAAKKVSCHACQTSKGMETV 1148

Query: 3603 AMPYVFRYLATELAAMNIKMTLQLS 3677
            AMPYVFRYLA ELAAMNIKMTL+L+
Sbjct: 1149 AMPYVFRYLAAELAAMNIKMTLKLN 1173


>ref|XP_006464287.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2-like
            isoform X1 [Citrus sinensis]
          Length = 1175

 Score = 1724 bits (4465), Expect = 0.0
 Identities = 860/1165 (73%), Positives = 975/1165 (83%), Gaps = 6/1165 (0%)
 Frame = +3

Query: 198  KEKDYTALADLFRHHIESFDYMVDQGLEIMLNNIKPVEIFNSSTNQKLKISFEKPEVYPP 377
            K  D+  L +L RHHIESFDYM+D+GL  M +++K V + +S TN++LKIS   PE++PP
Sbjct: 5    KSADFEPLRELVRHHIESFDYMLDEGLSEMFDHVKTVFVHDSFTNKRLKISVGNPEIFPP 64

Query: 378  QKERAMRTLPDTLYPFECRQAKISYTGKFLVNICFQYGDE-KVKVREKTNFGQFPIMLKS 554
            QKE+  +TL D L PFECRQAKISYTGK + ++ FQY D     VRE+ NFGQFP+MLK+
Sbjct: 65   QKEQGSKTLRDALLPFECRQAKISYTGKLMADVEFQYLDAGSPVVRERFNFGQFPVMLKT 124

Query: 555  KLCHLRGADTKKLVSLKEEASEMGGYFILNGLERVVRLLILPKRNYPTSMVRNSFRERRE 734
            + CHL+GAD++KLVSLKEEA+EMGGYFILNGLERV R +ILPK+NYP SMVR+SFR+RRE
Sbjct: 125  RRCHLQGADSQKLVSLKEEAAEMGGYFILNGLERVFRSVILPKQNYPMSMVRSSFRDRRE 184

Query: 735  GYTDKAVVIRCVREDLSAVTLKLYYLSNGSARLGFWIQGREYLLPVGLVLKALADTSDHE 914
            GYTDKAVVIRCVR+D S+VTLKLYYL NGS RLGFW+QG+EYLLPVG+VLKAL DT+D E
Sbjct: 185  GYTDKAVVIRCVRKDQSSVTLKLYYLLNGSVRLGFWLQGKEYLLPVGIVLKALVDTNDLE 244

Query: 915  IYVSLTCCYDEKYDGVKGSVGTQLVGERAKIILDEVHALSLFTREQCLEHIGKHFQPVMV 1094
            I+  LTCCYDEKY   KG+VG+ LV ER KIIL EV  LSL TR QCL+HIG+HFQPV+ 
Sbjct: 245  IFNHLTCCYDEKYKKEKGAVGSPLVSERVKIILAEVQDLSLTTRLQCLQHIGEHFQPVID 304

Query: 1095 GMEKEKPTAVADAVLEEYIFVHLYNNHDKFNLLLYMLQKLFSLVDQTSVPDNPDSLQNQE 1274
            G++ E   AVA+ V+ +YIFVHL +N+DKFNLL++MLQKLFSLVD TSV DNPDSLQNQE
Sbjct: 305  GLQSESYYAVAETVIRDYIFVHLNDNNDKFNLLIFMLQKLFSLVDHTSVSDNPDSLQNQE 364

Query: 1275 ILLPGHLITIYLKEKLQEWLLKVKRQLQDETDNN-KKFEFTNLADIKKVIDKNSPKQISS 1451
            ILLPGHLITIYLKEKL++WL K K+ +QDE +NN KKF+F NLA+IKKV++KN  KQI +
Sbjct: 365  ILLPGHLITIYLKEKLEDWLRKGKKLIQDEIENNGKKFDFFNLANIKKVMEKNPSKQIGT 424

Query: 1452 AIENMLKTGRLATQSGLDLQQRAGMTVQAERLNFLRFLSHFRAVHRGASFAGLRTTSVRK 1631
            +IE MLKTGRLATQ+GLDLQQRAG TVQAERLNFLRF+S FRAVHRGASFAGLRTTSVRK
Sbjct: 425  SIETMLKTGRLATQTGLDLQQRAGYTVQAERLNFLRFISFFRAVHRGASFAGLRTTSVRK 484

Query: 1632 LLPESWGFLCPVHTPDGEPCGLLNHMTSTCRITSFYDSKGNIRDFFKMRMXXXXXXXXXX 1811
            LLPESWGFLCPVHTPDGEPCGLLNHMTSTCR+ S+YDS+GNIRDF KMR           
Sbjct: 485  LLPESWGFLCPVHTPDGEPCGLLNHMTSTCRVASYYDSRGNIRDFSKMRTSILRVLIGVG 544

Query: 1812 XXXXXPKLVHAGPPKVLSVLLDGRIVGSIPIEMVEKAVSHLRRLKLSA--MIPEDLEVGY 1985
                 PKLV +GPP VLSVLLDGR+VG IP   +EK V+HLRRLK+SA  +IP+DLEVGY
Sbjct: 545  MIPSLPKLVKSGPPAVLSVLLDGRVVGVIPSSEIEKVVAHLRRLKVSAASVIPDDLEVGY 604

Query: 1986 VPLSTCGTYPGLYLFTCPSRFIRPVKNISVPSGKENAVELIGPFEQVYMEISCPDGGDGG 2165
            VPLS  G YPGLYLFT P +F+RPV+NIS+PS +   +ELIGPFEQV+MEI CPDGGDGG
Sbjct: 605  VPLSLGGAYPGLYLFTSPPKFVRPVRNISLPSEESQNIELIGPFEQVFMEIRCPDGGDGG 664

Query: 2166 RKDVFPATHEEIHPTGFLSVVANLTPWSDHNQSPRNMYQCQMGKQTMGFPSQAIHHRADQ 2345
            R++ FPATHEEIHPTG LSVVANLTP+SDHNQSPRNMYQCQM KQTMGF  QA+  RADQ
Sbjct: 665  RRNAFPATHEEIHPTGMLSVVANLTPYSDHNQSPRNMYQCQMAKQTMGFSVQALKFRADQ 724

Query: 2346 KLYHLQTPQTPIVRTKAYENYNIDDFPLGTNAIVAVLAYSGYDMEDAMILNKSSVERGMF 2525
            KLYHLQTPQTPIVRT  Y  Y+ID++P GTNAIVAVLAY+GYDMEDAMILNKSSV+RGM 
Sbjct: 725  KLYHLQTPQTPIVRTNTYTKYSIDEYPTGTNAIVAVLAYTGYDMEDAMILNKSSVDRGMC 784

Query: 2526 HGHIYQTETIDLVEQSSKSDRAGRTFRRSNLDKSSRHLIDSDGLPYIGQRIKPDEPYCSI 2705
            HG IYQTETIDL +  +K DR  + FRR+   KS   +IDSDGLPY+GQ I P EPYCSI
Sbjct: 785  HGQIYQTETIDLSDDGNKVDRGQKLFRRNKDAKSLHSVIDSDGLPYVGQMIHPGEPYCSI 844

Query: 2706 YNEITSSTCNTKLKGSEPVIVDYVAVDVKNKKNL-QKANIRFRRTRNPVIGDKFSSRHGQ 2882
            Y++ T+S      KGSE V VDYVAVD+KN KNL QKANIRFR TRNP+IGDKFSSRHGQ
Sbjct: 845  YDKTTNSWRTNSRKGSESVFVDYVAVDMKNSKNLPQKANIRFRHTRNPIIGDKFSSRHGQ 904

Query: 2883 KGVCSQLWSDIDMPFSAVTGMRPDLIINPHAFPSRMTIGMLLESMAAKGGAIHGKFIDAT 3062
            KGVCSQLW DIDMPFS VTGMRPDLIINPHAFPSRMTI MLLES+AAKGG++HGKF+DAT
Sbjct: 905  KGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGKFMDAT 964

Query: 3063 PFGSSPAHAS-EGQKSESSSLVDELGEMLRAEGFNYHGNEVLYSGVYGTELTCEIFIGPV 3239
            PF +S    + +    ES SLVDELGEMLR  GFNYHG EVLYSGVYGTELTCEIFIGPV
Sbjct: 965  PFANSVKKTNGDTGTDESKSLVDELGEMLRTCGFNYHGVEVLYSGVYGTELTCEIFIGPV 1024

Query: 3240 YYQRLRHMVSDKFQVRSTGTVDQITRQPXXXXXXXXXXXFGEMERDSLLAHGAAYLLHDR 3419
            YYQRLRHMVSDKFQVRSTGT+DQITRQP           FGEMERDSLLAHGAAYLLHDR
Sbjct: 1025 YYQRLRHMVSDKFQVRSTGTMDQITRQPIKGRKRGGGIRFGEMERDSLLAHGAAYLLHDR 1084

Query: 3420 LHTSSDHHIADVCSLCGSILTTTLIQAQKRAIREIGGLPPARAPKKVMCISCRTSKGMET 3599
            LHT SD+H+ADVCSLCGS+LT T I  QKRAIREIGGLPPARAPKKV C +C+TSKGMET
Sbjct: 1085 LHTCSDYHVADVCSLCGSVLTATFIHPQKRAIREIGGLPPARAPKKVTCHACQTSKGMET 1144

Query: 3600 VAMPYVFRYLATELAAMNIKMTLQL 3674
            VAMPYVFRYLA ELAAMNIK+TLQL
Sbjct: 1145 VAMPYVFRYLAAELAAMNIKITLQL 1169


>ref|XP_004486057.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2-like
            isoform X1 [Cicer arietinum]
            gi|502078798|ref|XP_004486058.1| PREDICTED: probable
            DNA-directed RNA polymerase I subunit RPA2-like isoform
            X2 [Cicer arietinum]
          Length = 1177

 Score = 1720 bits (4455), Expect = 0.0
 Identities = 852/1164 (73%), Positives = 969/1164 (83%), Gaps = 3/1164 (0%)
 Frame = +3

Query: 195  MKEKDYTALADLFRHHIESFDYMVDQGLEIMLNNIKPVEIFNSSTNQKLKISFEKPEVYP 374
            + + ++ AL DL + HIESFD+M+D GL+ M   IKP+E+ + +    LKIS + P+++ 
Sbjct: 12   LDDANFDALRDLLKPHIESFDHMIDAGLKTMFIGIKPLEVPHPTQPTTLKISMDNPKIFE 71

Query: 375  PQKERAMRTLPDTLYPFECRQAKISYTGKFLVNICFQYGDEKVKVREKTNFGQFPIMLKS 554
            PQKER      + LYPFECRQAKISYTG F   +CFQY +  + VREK NFGQFPIML+S
Sbjct: 72   PQKERGFSKSRNILYPFECRQAKISYTGTFTAELCFQYDNGPI-VREKFNFGQFPIMLQS 130

Query: 555  KLCHLRGADTKKLVSLKEEASEMGGYFILNGLERVVRLLILPKRNYPTSMVRNSFRERRE 734
            KLC+LRGA  KKLVS KEEASE+GGYFILNGLERV+RLLI+PKRNYP S VR+SF ERRE
Sbjct: 131  KLCNLRGASPKKLVSYKEEASEVGGYFILNGLERVMRLLIMPKRNYPMSTVRSSFSERRE 190

Query: 735  GYTDKAVVIRCVREDLSAVTLKLYYLSNGSARLGFWIQGREYLLPVGLVLKALADTSDHE 914
            GYTDKAVVIRCVR D ++V++KLYYL NGSARLGFWI GREY+LPVG+VLKAL DT+D E
Sbjct: 191  GYTDKAVVIRCVRADQTSVSIKLYYLRNGSARLGFWILGREYMLPVGIVLKALIDTTDRE 250

Query: 915  IYVSLTCCYDEKYDGVKGSVGTQLVGERAKIILDEVHALSLFTREQCLEHIGKHFQPVMV 1094
            IYV+LT CY+EKY+  KG+VGTQLVGERAKIILDEV  LSLFTR QCL++IG+HFQP++ 
Sbjct: 251  IYVNLTSCYNEKYEKGKGAVGTQLVGERAKIILDEVRDLSLFTRLQCLQYIGEHFQPILQ 310

Query: 1095 GMEKEKPTAVADAVLEEYIFVHLYNNHDKFNLLLYMLQKLFSLVDQTSVPDNPDSLQNQE 1274
            G++ E    VADAVL +YI VHL NN DKFNLL++MLQKLFSL+DQTSVPDNPDSLQNQE
Sbjct: 311  GLKNESHHIVADAVLRDYILVHLDNNFDKFNLLIFMLQKLFSLIDQTSVPDNPDSLQNQE 370

Query: 1275 ILLPGHLITIYLKEKLQEWLLKVKRQLQDETDNN-KKFEFTNLADIKKVIDKNSPKQISS 1451
            +LLPGHLIT+YLKEKL+EWL K KR L DE +     FEF  +AD+KKV++KN  K IS+
Sbjct: 371  VLLPGHLITLYLKEKLEEWLQKGKRLLLDEIEKKGATFEFGRIADVKKVLEKNHTKGIST 430

Query: 1452 AIENMLKTGRLATQSGLDLQQRAGMTVQAERLNFLRFLSHFRAVHRGASFAGLRTTSVRK 1631
            AIENMLKTGRL T +GLDL QRAG TVQAER+NFLRF+SHFRAVHRG+SFAGLRTT+VRK
Sbjct: 431  AIENMLKTGRLVTTTGLDLHQRAGYTVQAERINFLRFISHFRAVHRGSSFAGLRTTTVRK 490

Query: 1632 LLPESWGFLCPVHTPDGEPCGLLNHMTSTCRITSFYDSKGNIRDFFKMRMXXXXXXXXXX 1811
            LLPESWGFLCPVHTPDGEPCGLLNHMT TCR+TSFYDS+GNI+D+FK+++          
Sbjct: 491  LLPESWGFLCPVHTPDGEPCGLLNHMTRTCRVTSFYDSEGNIKDYFKIKLSILNILVEIG 550

Query: 1812 XXXXXPKLVHAGPPKVLSVLLDGRIVGSIPIEMVEKAVSHLRRLKLS--AMIPEDLEVGY 1985
                 PK+   GPP+VL+VLLDG IVG IP   VEK V+H+R LK+S  A+IP D+EVGY
Sbjct: 551  MTQSLPKIFLPGPPEVLTVLLDGCIVGFIPSTEVEKVVAHIRELKVSSAAVIPNDMEVGY 610

Query: 1986 VPLSTCGTYPGLYLFTCPSRFIRPVKNISVPSGKENAVELIGPFEQVYMEISCPDGGDGG 2165
            VPLS  G YPGLYLFT PSRF+RPV+N+S+PS  EN VELIGPFEQV+MEI CPDGGDGG
Sbjct: 611  VPLSMGGAYPGLYLFTSPSRFVRPVRNLSIPSTNEN-VELIGPFEQVFMEIRCPDGGDGG 669

Query: 2166 RKDVFPATHEEIHPTGFLSVVANLTPWSDHNQSPRNMYQCQMGKQTMGFPSQAIHHRADQ 2345
            RK  FPATHEEIHPTG LSVV NLTPWSDHNQSPRNMYQCQM KQTMGF SQ I HRADQ
Sbjct: 670  RKSPFPATHEEIHPTGMLSVVGNLTPWSDHNQSPRNMYQCQMAKQTMGFSSQTIQHRADQ 729

Query: 2346 KLYHLQTPQTPIVRTKAYENYNIDDFPLGTNAIVAVLAYSGYDMEDAMILNKSSVERGMF 2525
            KLYHLQTPQTPIVRT+AY  Y+ID++P GTNAIVAVLAY+GYDMEDAMILNKSSVERGMF
Sbjct: 730  KLYHLQTPQTPIVRTRAYSEYSIDEYPSGTNAIVAVLAYTGYDMEDAMILNKSSVERGMF 789

Query: 2526 HGHIYQTETIDLVEQSSKSDRAGRTFRRSNLDKSSRHLIDSDGLPYIGQRIKPDEPYCSI 2705
            HG IYQTETIDL E+  KSD++ R FR+S LDK     IDSDGLP++GQ I PDEPYCS 
Sbjct: 790  HGQIYQTETIDLTEKGGKSDQSARVFRKSKLDKPCPS-IDSDGLPHVGQMIWPDEPYCST 848

Query: 2706 YNEITSSTCNTKLKGSEPVIVDYVAVDVKNKKNLQKANIRFRRTRNPVIGDKFSSRHGQK 2885
            YNE+T+ T   K KGSEPV VDYVAVD K KKNL K NIRFR  RNPVIGDKFSSRHGQK
Sbjct: 849  YNEVTNKTYLFKKKGSEPVYVDYVAVDTKTKKNLNKVNIRFRHPRNPVIGDKFSSRHGQK 908

Query: 2886 GVCSQLWSDIDMPFSAVTGMRPDLIINPHAFPSRMTIGMLLESMAAKGGAIHGKFIDATP 3065
            GVCSQLW DIDMPFS  TGMRPDLIINPHAFPSRMTI MLLES+AAKGG++HGKF DATP
Sbjct: 909  GVCSQLWPDIDMPFSGTTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGKFKDATP 968

Query: 3066 FGSSPAHASEGQKSESSSLVDELGEMLRAEGFNYHGNEVLYSGVYGTELTCEIFIGPVYY 3245
            F SS     E   S+S+SLVDELG ML+ +GFNYHG EVLYSGVYGTELTCEIFIGPVYY
Sbjct: 969  FRSSVKKDDEESGSKSASLVDELGVMLKEKGFNYHGCEVLYSGVYGTELTCEIFIGPVYY 1028

Query: 3246 QRLRHMVSDKFQVRSTGTVDQITRQPXXXXXXXXXXXFGEMERDSLLAHGAAYLLHDRLH 3425
            QRLRHMVSDK+QVRSTGT+DQ+TRQP           FGEMERDSLLAHGAAYLLHDRLH
Sbjct: 1029 QRLRHMVSDKYQVRSTGTIDQVTRQPIKGRKRGGGIRFGEMERDSLLAHGAAYLLHDRLH 1088

Query: 3426 TSSDHHIADVCSLCGSILTTTLIQAQKRAIREIGGLPPARAPKKVMCISCRTSKGMETVA 3605
            T SD+HIADVCS+CGS+LTTT  Q +KR +REIGGLPPARAP+KV C +C++SKGME VA
Sbjct: 1089 TCSDYHIADVCSICGSMLTTTFQQPRKRPVREIGGLPPARAPRKVTCHACQSSKGMEKVA 1148

Query: 3606 MPYVFRYLATELAAMNIKMTLQLS 3677
            MPY+FRYLA ELAAMNIKMTL+L+
Sbjct: 1149 MPYIFRYLAAELAAMNIKMTLKLT 1172


>ref|XP_002529996.1| DNA-directed RNA polymerase I subunit, putative [Ricinus communis]
            gi|223530519|gb|EEF32401.1| DNA-directed RNA polymerase I
            subunit, putative [Ricinus communis]
          Length = 1159

 Score = 1720 bits (4455), Expect = 0.0
 Identities = 858/1166 (73%), Positives = 965/1166 (82%), Gaps = 9/1166 (0%)
 Frame = +3

Query: 207  DYTALADLFRHHIESFDYMVDQGLEIMLNNIKPVEIFNSSTNQKLKISFEKPEVYPPQKE 386
            DY+AL +L RHHI+SFDYM+++GLEIML+NIKP                           
Sbjct: 17   DYSALQELTRHHIDSFDYMIERGLEIMLDNIKP--------------------------- 49

Query: 387  RAMRTLPDTLYPFECRQAKISYTGKFLVNICFQYGDEKVKVREKTNFGQFPIMLKSKLCH 566
             + RT    L PFECRQAKISYTGKF  ++CF+Y  + V +REK NFGQ PIMLKS+LCH
Sbjct: 50   ESSRTKHKRLLPFECRQAKISYTGKFEADVCFEYHGKAV-IREKYNFGQLPIMLKSRLCH 108

Query: 567  LRGADTKKLVSLKEEASEMGGYFILNGLERVVRLLILPKRNYPTSMVRNSFRERREGYTD 746
            L G D+++LVS  EE++EMGGYFILNGLERVVRLLI+PKRNYP S VR SFR+RREGYTD
Sbjct: 109  LYGVDSQQLVSFNEESAEMGGYFILNGLERVVRLLIMPKRNYPMSTVRGSFRDRREGYTD 168

Query: 747  KAVVIRCVRE------DLSAVTLKLYYLSNGSARLGFWIQGREYLLPVGLVLKALADTSD 908
            KAVVIRCVRE      D S+V++KLYYL +GSARLGFWIQGREYLLP G+VLKALA+T+D
Sbjct: 169  KAVVIRCVREYQSSLTDQSSVSVKLYYLRSGSARLGFWIQGREYLLPAGIVLKALAETTD 228

Query: 909  HEIYVSLTCCYDEKYDGVKGSVGTQLVGERAKIILDEVHALSLFTREQCLEHIGKHFQPV 1088
             EIY  LTCCYDEKY+  KG+VG+QLVGERAKIILDEV  LSLFT+ +CL HIG+HFQPV
Sbjct: 229  REIYEKLTCCYDEKYEKAKGAVGSQLVGERAKIILDEVRDLSLFTQSECLRHIGEHFQPV 288

Query: 1089 MVGMEKEKPTAVADAVLEEYIFVHLYNNHDKFNLLLYMLQKLFSLVDQTSVPDNPDSLQN 1268
            M G+EKE  + VA AVL++YIFVHL N  DKFNLL++MLQKLFSLVDQTSV DNPDSLQN
Sbjct: 289  MDGLEKETFSNVAHAVLKDYIFVHLNNYDDKFNLLIFMLQKLFSLVDQTSVVDNPDSLQN 348

Query: 1269 QEILLPGHLITIYLKEKLQEWLLKVKRQLQDETDNNKKFEFTNLADIKKVIDKNSPKQIS 1448
            QE+LLPGHL+TIYLKEKL+EWL K K+ LQ+E   N  F F ++ D+KKVIDKN    IS
Sbjct: 349  QEVLLPGHLVTIYLKEKLEEWLRKAKKVLQEEIAKNNNFNFLSVLDVKKVIDKNPSTTIS 408

Query: 1449 SAIENMLKTGRLATQSGLDLQQRAGMTVQAERLNFLRFLSHFRAVHRGASFAGLRTTSVR 1628
             A+ENMLKTGRL TQ+GLDLQQRAG TVQAERLNFLRFLS FRAVHRGASFAGLRTTSVR
Sbjct: 409  LAVENMLKTGRLVTQTGLDLQQRAGYTVQAERLNFLRFLSFFRAVHRGASFAGLRTTSVR 468

Query: 1629 KLLPESWGFLCPVHTPDGEPCGLLNHMTSTCRITSFYDSKGNIRDFFKMRMXXXXXXXXX 1808
            KLLPESWGFLCPVHTPDGEPCGLLNHMT +CRITS++DS+G ++DFF +R          
Sbjct: 469  KLLPESWGFLCPVHTPDGEPCGLLNHMTRSCRITSYFDSQGAVKDFFDIRKSILGVLTSL 528

Query: 1809 XXXXXXPKLVHAGPPKVLSVLLDGRIVGSIPIEMVEKAVSHLRRLKLSA--MIPEDLEVG 1982
                  PKLV AGPP+VLSVLLDGR+VGSIP   VEK V HLRRLK++A  +IP+DLEVG
Sbjct: 529  GMTSSLPKLVQAGPPQVLSVLLDGRVVGSIPSSQVEKVVVHLRRLKVAASSVIPDDLEVG 588

Query: 1983 YVPLSTCGTYPGLYLFTCPSRFIRPVKNISVPSGKENAVELIGPFEQVYMEISCPDGGDG 2162
            YVPLS  G +PGLYLFT PSRFIRPVKNIS+P+G+   +ELIGPFEQV+MEI CPDGG+G
Sbjct: 589  YVPLSMGGAFPGLYLFTSPSRFIRPVKNISIPAGEGENIELIGPFEQVFMEIRCPDGGNG 648

Query: 2163 GRKDVFPATHEEIHPTGFLSVVANLTPWSDHNQSPRNMYQCQMGKQTMGFPSQAIHHRAD 2342
            GR D FPATHEEIHPT  LSVVANLTPWSDHNQSPRNMYQCQM KQTM F  Q++  RAD
Sbjct: 649  GRSDAFPATHEEIHPTDMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSLQSLRFRAD 708

Query: 2343 QKLYHLQTPQTPIVRTKAYENYNIDDFPLGTNAIVAVLAYSGYDMEDAMILNKSSVERGM 2522
            QKLYHLQTPQTPIVRT +Y  Y +D++P GTNAIVAVLAY+GYDMEDAMILNKSSVERGM
Sbjct: 709  QKLYHLQTPQTPIVRTSSYTKYCVDEYPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGM 768

Query: 2523 FHGHIYQTETIDLVEQSSKSDRAGRTFRRSNLDKSSRHLIDSDGLPYIGQRIKPDEPYCS 2702
             HG IYQTETIDL E+ S+SDRA R FRRSN+DKS   +IDSDGLPY+GQ I P+EPYCS
Sbjct: 769  CHGQIYQTETIDLSEEGSRSDRAQRMFRRSNIDKSLHSVIDSDGLPYVGQMIHPNEPYCS 828

Query: 2703 IYNEITSSTCNTKLKGSEPVIVDYVAVDVKNKKNLQKANIRFRRTRNPVIGDKFSSRHGQ 2882
            IYNEIT++T     KGS+PVIVDYVA+D KNKK+LQK NIRFR  RNP+IGDKFSSRHGQ
Sbjct: 829  IYNEITNTTRTNNRKGSDPVIVDYVAIDTKNKKHLQKVNIRFRHPRNPIIGDKFSSRHGQ 888

Query: 2883 KGVCSQLWSDIDMPFSAVTGMRPDLIINPHAFPSRMTIGMLLESMAAKGGAIHGKFIDAT 3062
            KGVCSQLW DIDMPFS VTGMRPDLIINPHAFPSRMTI MLLES+AAKGG+++GKF+DAT
Sbjct: 889  KGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESLAAKGGSLNGKFVDAT 948

Query: 3063 PFGSSPAHASEGQ-KSESSSLVDELGEMLRAEGFNYHGNEVLYSGVYGTELTCEIFIGPV 3239
            PF SS  + + G+ KSES SLVD+LG MLR+ GFNYHG EVLYSGVYGTELTCEIFIGPV
Sbjct: 949  PFTSSVKNVNGGEAKSESESLVDDLGNMLRSHGFNYHGVEVLYSGVYGTELTCEIFIGPV 1008

Query: 3240 YYQRLRHMVSDKFQVRSTGTVDQITRQPXXXXXXXXXXXFGEMERDSLLAHGAAYLLHDR 3419
            YYQRLRHMVSDKFQVRSTGTVDQITRQP           FGEMERD++LAHGAAYLLHDR
Sbjct: 1009 YYQRLRHMVSDKFQVRSTGTVDQITRQPIKGRKRGGGIRFGEMERDAMLAHGAAYLLHDR 1068

Query: 3420 LHTSSDHHIADVCSLCGSILTTTLIQAQKRAIREIGGLPPARAPKKVMCISCRTSKGMET 3599
            LHT SD+HIADVCSLCGSILTT+ IQ QKR +R+IGGLPP  APKKV C SC+TSKGMET
Sbjct: 1069 LHTCSDYHIADVCSLCGSILTTSFIQTQKRVVRDIGGLPPVGAPKKVACHSCQTSKGMET 1128

Query: 3600 VAMPYVFRYLATELAAMNIKMTLQLS 3677
            VAMPYVFRYLA ELAAMNIKM +QLS
Sbjct: 1129 VAMPYVFRYLAAELAAMNIKMNVQLS 1154


>ref|XP_006594369.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like isoform X2
            [Glycine max]
          Length = 1151

 Score = 1662 bits (4304), Expect = 0.0
 Identities = 832/1160 (71%), Positives = 950/1160 (81%), Gaps = 3/1160 (0%)
 Frame = +3

Query: 207  DYTALADLFRHHIESFDYMVDQGLEIMLNNIKPVEIFNSSTNQKLKISFEKPEVYPPQKE 386
            D+ AL +LF+HHIESFDYMVD GL+ ML +IKPVE+F+  T+ KL+I  + P +YPPQKE
Sbjct: 10   DFEALRELFKHHIESFDYMVDAGLDTMLGHIKPVEVFDDFTSTKLRIWLDNPVLYPPQKE 69

Query: 387  RAMRTLPDTLYPFECRQAKISYTGKFLVNICFQYGDEKVKVREKTNFGQFPIMLKSKLCH 566
            R  RT+ + L PFECRQAKISY+GK  +++CFQY D  + +RE  NFGQFPIML+SKLC+
Sbjct: 70   RISRTMREALLPFECRQAKISYSGKITIDVCFQYNDGPI-IRENVNFGQFPIMLQSKLCN 128

Query: 567  LRGADTKKLVSLKEEASEMGGYFILNGLERVVRLLILPKRNYPTSMVRNSFRERREGYTD 746
            LRGAD +KLVS KEEASEMGGYFILNGLERVVRLLILPKRNYP SMVRNSF +RREGYTD
Sbjct: 129  LRGADPQKLVSYKEEASEMGGYFILNGLERVVRLLILPKRNYPMSMVRNSFSDRREGYTD 188

Query: 747  KAVVIRCVREDLSAVTLKLYYLSNGSARLGFWIQGREYLLPVGLVLKALADTSDHEIYVS 926
            KAVVIRCVR D S+++++LYYL NGSARLGFW++GREYLLPVG++LKAL DT+D EIYV+
Sbjct: 189  KAVVIRCVRADQSSLSVRLYYLRNGSARLGFWLRGREYLLPVGIILKALIDTTDREIYVN 248

Query: 927  LTCCYDEKYDGVKGSVGTQLVGERAKIILDEVHALSLFTREQCLEHIGKHFQPVMVGMEK 1106
            LT CY+EKY+  KG+VGTQLVGERAKIILDE+  LSLFTR QCLE+IG+HFQPVM  ++ 
Sbjct: 249  LTSCYNEKYEKGKGAVGTQLVGERAKIILDELRDLSLFTRLQCLEYIGEHFQPVMNELKN 308

Query: 1107 EKPTAVADAVLEEYIFVHLYNNHDKFNLLLYMLQKLFSLVDQTSVPDNPDSLQNQEILLP 1286
            +    VADAVL++ I VHL NN DKFNLL++MLQKLFSL+DQTSVPDNPDSLQN E+LLP
Sbjct: 309  DSYPIVADAVLKDCILVHLDNNFDKFNLLIFMLQKLFSLIDQTSVPDNPDSLQNHEVLLP 368

Query: 1287 GHLITIYLKEKLQEWLLKVKRQLQDETDN-NKKFEFTNLADIKKVIDKNSPKQISSAIEN 1463
            GHLIT+YLKEKL++WL K +R L DE D  +KKF+F+++  +KKV+DKNSPKQ+S+A+EN
Sbjct: 369  GHLITLYLKEKLEDWLQKGRRLLLDEIDKKSKKFDFSDIVQVKKVMDKNSPKQVSTAVEN 428

Query: 1464 MLKTGRLATQSGLDLQQRAGMTVQAERLNFLRFLSHFRAVHRGASFAGLRTTSVRKLLPE 1643
            MLKTGRL TQ+GLDLQQRAG TVQAERLNFLRFLSHFRAVHRGASFAGLRTT+VRKLLPE
Sbjct: 429  MLKTGRLVTQTGLDLQQRAGYTVQAERLNFLRFLSHFRAVHRGASFAGLRTTTVRKLLPE 488

Query: 1644 SWGFLCPVHTPDGEPCGLLNHMTSTCRITSFYDSKGNIRDFFKMRMXXXXXXXXXXXXXX 1823
            SWGFLCPVHTPDGEPCGLLNHMT T RITSF+DS+GNI+D+FK++M              
Sbjct: 489  SWGFLCPVHTPDGEPCGLLNHMTCTSRITSFFDSQGNIKDYFKIKMSILNVLLEVGMTPS 548

Query: 1824 XPKLVHAGPPKVLSVLLDGRIVGSIPIEMVEKAVSHLRRLKLS--AMIPEDLEVGYVPLS 1997
             PK+   GPP+ L+VLLDG +VG I    VEK V+H+R LK+S  A+IP+D+EVGYVPLS
Sbjct: 549  LPKIFLPGPPEALTVLLDGCVVGCIASSEVEKVVAHIRELKVSSVAVIPDDMEVGYVPLS 608

Query: 1998 TCGTYPGLYLFTCPSRFIRPVKNISVPSGKENAVELIGPFEQVYMEISCPDGGDGGRKDV 2177
              G YPGLYL T PSRF+RPV+NIS+ S     +ELIGPFEQV+MEI CPDGGDGGRK  
Sbjct: 609  MGGAYPGLYLCTSPSRFVRPVRNISIASDGSENIELIGPFEQVFMEIRCPDGGDGGRKSS 668

Query: 2178 FPATHEEIHPTGFLSVVANLTPWSDHNQSPRNMYQCQMGKQTMGFPSQAIHHRADQKLYH 2357
            FPATHEEIHPT  LSVVANLTPWSDHNQSPRNMYQ   GK   G                
Sbjct: 669  FPATHEEIHPTVMLSVVANLTPWSDHNQSPRNMYQ--YGKANNGI--------------- 711

Query: 2358 LQTPQTPIVRTKAYENYNIDDFPLGTNAIVAVLAYSGYDMEDAMILNKSSVERGMFHGHI 2537
              T  +   R K   +        GTNAIVAVLAY+GYDMEDAMILNKSSVERGMFHG I
Sbjct: 712  FFTNYSTSCRPKVISSS-------GTNAIVAVLAYTGYDMEDAMILNKSSVERGMFHGQI 764

Query: 2538 YQTETIDLVEQSSKSDRAGRTFRRSNLDKSSRHLIDSDGLPYIGQRIKPDEPYCSIYNEI 2717
            YQTETIDL EQ  +SDR+ R FR+SN++KS+   IDSDGLP++GQ I+PDEPYCSIYNE+
Sbjct: 765  YQTETIDLTEQGGRSDRSSRMFRKSNIEKSACPSIDSDGLPHVGQMIRPDEPYCSIYNEV 824

Query: 2718 TSSTCNTKLKGSEPVIVDYVAVDVKNKKNLQKANIRFRRTRNPVIGDKFSSRHGQKGVCS 2897
            TSS    K KGSE V VDYVA DVKNKK+LQK NIRFR  RNPVIGDKFSSRHGQKGVCS
Sbjct: 825  TSSIHTLKRKGSEAVYVDYVAADVKNKKHLQKVNIRFRHPRNPVIGDKFSSRHGQKGVCS 884

Query: 2898 QLWSDIDMPFSAVTGMRPDLIINPHAFPSRMTIGMLLESMAAKGGAIHGKFIDATPFGSS 3077
            QLW D+DMPFS  TGMRPDLIINPHAFPSRMTI MLLES+AAKGG++ G+F+DATPF SS
Sbjct: 885  QLWPDVDMPFSGTTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLRGEFVDATPFRSS 944

Query: 3078 PAHASEGQKSESSSLVDELGEMLRAEGFNYHGNEVLYSGVYGTELTCEIFIGPVYYQRLR 3257
                S    S+S SLVD+LG +LR +GFNYHG EVLYSGVYGTELTCEIFIGPVYYQRLR
Sbjct: 945  VTKDSGESDSKSGSLVDDLGLLLREKGFNYHGLEVLYSGVYGTELTCEIFIGPVYYQRLR 1004

Query: 3258 HMVSDKFQVRSTGTVDQITRQPXXXXXXXXXXXFGEMERDSLLAHGAAYLLHDRLHTSSD 3437
            HMVSDKFQVRSTGT+DQ+TRQP           FGEMERDSLLAHGAAYLLHDRLHT SD
Sbjct: 1005 HMVSDKFQVRSTGTIDQVTRQPIKGRKRGGGIRFGEMERDSLLAHGAAYLLHDRLHTCSD 1064

Query: 3438 HHIADVCSLCGSILTTTLIQAQKRAIREIGGLPPARAPKKVMCISCRTSKGMETVAMPYV 3617
            +HIADVCSLCGS+L TT IQ QKR +REIGGLPP RAPKKV C +C+TSKGMETVAMPYV
Sbjct: 1065 YHIADVCSLCGSMLATTFIQPQKRPVREIGGLPPGRAPKKVTCHACQTSKGMETVAMPYV 1124

Query: 3618 FRYLATELAAMNIKMTLQLS 3677
            FRYLA ELAAMNIKMTL+LS
Sbjct: 1125 FRYLAAELAAMNIKMTLKLS 1144


>ref|XP_004307166.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like [Fragaria
            vesca subsp. vesca]
          Length = 1169

 Score = 1659 bits (4295), Expect = 0.0
 Identities = 831/1162 (71%), Positives = 956/1162 (82%), Gaps = 5/1162 (0%)
 Frame = +3

Query: 207  DYTALADLFRHHIESFDYMVDQGLEIMLNNIKPVEIFNSSTNQKLKISF-EKPEVYPPQK 383
            D   L +LFRHHI+SFDY++  GL +ML +IKPV++ N  T + L+I F + P +  P K
Sbjct: 12   DLAHLRELFRHHIDSFDYLITAGLGVMLRDIKPVQVDNPLTGETLRIWFADDPILGRPLK 71

Query: 384  ERAMRTLPDTLYPFECRQAKISYTGKFLVNICFQYGDEKVKVREKTNFGQFPIMLKSKLC 563
            +R+     + LYPFECRQ +ISYTGK L +I FQ GD K  VRE+ NFGQFPIML SK C
Sbjct: 72   DRSS----EPLYPFECRQTRISYTGKLLADIYFQRGD-KAPVREQFNFGQFPIMLMSKCC 126

Query: 564  HLRGADTKKLVSLKEEASEMGGYFILNGLERVVRLLILPKRNYPTSMVRNSFRERREGYT 743
            +LRG D ++LVS KEEASEMGGYFILNGLERV+R +ILPKRNYP S VRNSFR+R+EGYT
Sbjct: 127  NLRGHDPQQLVSCKEEASEMGGYFILNGLERVIRPVILPKRNYPMSTVRNSFRDRKEGYT 186

Query: 744  DKAVVIRCVREDLSAVTLKLYYLSNGSARLGFWIQGREYLLPVGLVLKALADTSDHEIYV 923
            DKAVVIRC R+D S+VT+KLYYL NGSARLG WIQG+E+LLPVGL+LKAL DT D+E+Y 
Sbjct: 187  DKAVVIRCARDDQSSVTVKLYYLQNGSARLGVWIQGKEFLLPVGLILKALVDTPDNELYA 246

Query: 924  SLTCCYDEKYDGVKGSVGTQLVGERAKIILDEVHALSLFTREQCLEHIGKHFQPVMVGME 1103
            SLTCCY  K++  KG+VGTQLVGERA+II++EV  L LFTR QCLE+IG+HFQP+M G+E
Sbjct: 247  SLTCCYPGKFEKGKGAVGTQLVGERAQIIINEVVELGLFTRGQCLENIGEHFQPLMSGLE 306

Query: 1104 KEKPTAVADAVLEEYIFVHLYNNHDKFNLLLYMLQKLFSLVDQTSVPDNPDSLQNQEILL 1283
             E  + V DAVL++YIFVHL  N DKFNLL++MLQKLFSL+DQTSV DNPDSLQNQE+LL
Sbjct: 307  NESYSVVGDAVLKDYIFVHLDKNEDKFNLLIFMLQKLFSLMDQTSVLDNPDSLQNQEVLL 366

Query: 1284 PGHLITIYLKEKLQEWLLKVKRQLQDE-TDNNKKFEFTNLADIKKVIDKNSPKQISSAIE 1460
            PGHLITIYLKEKL++WL + K+ LQDE    N    F ++  +KKV+DKN  +QIS A+E
Sbjct: 367  PGHLITIYLKEKLEDWLQRTKKLLQDEIKKENNNINFGSVDSLKKVLDKNPTRQISLAVE 426

Query: 1461 NMLKTGRLATQSGLDLQQRAGMTVQAERLNFLRFLSHFRAVHRGASFAGLRTTSVRKLLP 1640
            NMLKTGR+ TQ+GLDLQQRAG +VQAERLNFLRFLSHFRAVHRGASFAGLRTTSVRKLLP
Sbjct: 427  NMLKTGRINTQTGLDLQQRAGFSVQAERLNFLRFLSHFRAVHRGASFAGLRTTSVRKLLP 486

Query: 1641 ESWGFLCPVHTPDGEPCGLLNHMTSTCRITSFYDSKGNIRDFFKMRMXXXXXXXXXXXXX 1820
            ESWGFLCPVHTPDGEPCGLLNHMT TCRITS++D++GNIRDF K+RM             
Sbjct: 487  ESWGFLCPVHTPDGEPCGLLNHMTRTCRITSYFDAQGNIRDFTKIRMSILNVLIEVGMIP 546

Query: 1821 XXPKLVHAGPPKVLSVLLDGRIVGSIPIEMVEKAVSHLRRLKLSA--MIPEDLEVGYVPL 1994
              P LVH G P  LSVLLDGR+VG I    VEK V+HLR+LK+SA  +IP+DLEVGYVPL
Sbjct: 547  SLPMLVHVGLPANLSVLLDGRVVGYISSTQVEKVVAHLRKLKVSAASVIPDDLEVGYVPL 606

Query: 1995 STCGTYPGLYLFTCPSRFIRPVKNISVPSGKENAVELIGPFEQVYMEISCPDGGDGGRKD 2174
            S  G YPGLYLFT PSRF+RPVKNIS+ + +   +ELIGPFEQV+MEI CPDG DGGRKD
Sbjct: 607  SMGGAYPGLYLFTSPSRFVRPVKNISISAVEGQNIELIGPFEQVFMEIKCPDGRDGGRKD 666

Query: 2175 VFPATHEEIHPTGFLSVVANLTPWSDHNQSPRNMYQCQMGKQTMGFPSQAIHHRADQKLY 2354
             FPATHEEIHPTG LSVVANLTPWS+HNQSPRNMYQCQM KQTMGF  QA+ +RADQKLY
Sbjct: 667  AFPATHEEIHPTGMLSVVANLTPWSEHNQSPRNMYQCQMAKQTMGFSLQALRNRADQKLY 726

Query: 2355 HLQTPQTPIVRTKAYENYNIDDFPLGTNAIVAVLAYSGYDMEDAMILNKSSVERGMFHGH 2534
            HL+TPQ+PIVRTK Y NY +D++P GTNAIVAVL+Y+GYDMEDAMIL+KSSV+RGMFHG 
Sbjct: 727  HLKTPQSPIVRTKTYTNYCVDEYPTGTNAIVAVLSYTGYDMEDAMILSKSSVDRGMFHGL 786

Query: 2535 IYQTETIDLVEQSSKSDRAGRTFRRSNLDKSSRHLIDSDGLPYIGQRIKPDEPYCSIYNE 2714
            +YQTE++DL +Q  +S  + R+FRRS  DKS   LIDSDGLPY+GQ I PDEPY SIY+E
Sbjct: 787  VYQTESVDLSDQKGRSG-SQRSFRRSAADKSHHSLIDSDGLPYVGQTINPDEPYYSIYDE 845

Query: 2715 ITSSTCNTKLKGSEPVIVDYVAVDVKNKKNLQKANIRFRRTRNPVIGDKFSSRHGQKGVC 2894
            +  +   TK KGSEP IVDYVA+D   KK+LQK NIRFR  RNP+IGDKFSSRHGQKGVC
Sbjct: 846  VKGAIRTTKRKGSEPAIVDYVAID--GKKHLQKVNIRFRHPRNPIIGDKFSSRHGQKGVC 903

Query: 2895 SQLWSDIDMPFSAVTGMRPDLIINPHAFPSRMTIGMLLESMAAKGGAIHGKFIDATPFGS 3074
            SQLW DIDMPFS VTGMRPDLIINPHAFPSRMTI MLLES+AAKGG++HGKF+DATPF +
Sbjct: 904  SQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGKFVDATPFAN 963

Query: 3075 SPAHASEGQKSE-SSSLVDELGEMLRAEGFNYHGNEVLYSGVYGTELTCEIFIGPVYYQR 3251
            S    +E    E S +LVDELGEML+ +GFNY+G EVLYSGVYGTELTCEIFIGPVYYQR
Sbjct: 964  SEKKVNEETNGEKSKTLVDELGEMLKVKGFNYYGAEVLYSGVYGTELTCEIFIGPVYYQR 1023

Query: 3252 LRHMVSDKFQVRSTGTVDQITRQPXXXXXXXXXXXFGEMERDSLLAHGAAYLLHDRLHTS 3431
            LRHMVSDKFQVRSTG VDQ+TRQP           FGEMERDSLLAHGAAYLLHDRLHT 
Sbjct: 1024 LRHMVSDKFQVRSTGMVDQVTRQPIKGRKRGGGIRFGEMERDSLLAHGAAYLLHDRLHTC 1083

Query: 3432 SDHHIADVCSLCGSILTTTLIQAQKRAIREIGGLPPARAPKKVMCISCRTSKGMETVAMP 3611
            SD+HIADVCSLCGSILTT+ +Q Q   +REI G+PP RAPKKV C +C+TSKGMETVAMP
Sbjct: 1084 SDYHIADVCSLCGSILTTSSVQPQV-PVREIPGMPPMRAPKKVTCHACKTSKGMETVAMP 1142

Query: 3612 YVFRYLATELAAMNIKMTLQLS 3677
            YVFRYLA ELAAMNIK+ LQLS
Sbjct: 1143 YVFRYLAAELAAMNIKLNLQLS 1164


>ref|XP_004300118.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like [Fragaria
            vesca subsp. vesca]
          Length = 1171

 Score = 1655 bits (4285), Expect = 0.0
 Identities = 832/1162 (71%), Positives = 954/1162 (82%), Gaps = 5/1162 (0%)
 Frame = +3

Query: 207  DYTALADLFRHHIESFDYMVDQGLEIMLNNIKPVEIFNSSTNQKLKISF-EKPEVYPPQK 383
            D   L +LFRHHIESFDY+V  GL +ML +IKPV++ N  T + L+I F + P +  P K
Sbjct: 14   DLAHLRELFRHHIESFDYLVSAGLGVMLRDIKPVQVDNPLTGETLRIWFADDPILGRPLK 73

Query: 384  ERAMRTLPDTLYPFECRQAKISYTGKFLVNICFQYGDEKVKVREKTNFGQFPIMLKSKLC 563
            +R+     + LYPFECRQ +ISYTGK L +I FQ GD K  VRE+ NFGQFPIML SK C
Sbjct: 74   DRST----EPLYPFECRQTRISYTGKLLADIYFQRGD-KAPVREQFNFGQFPIMLMSKCC 128

Query: 564  HLRGADTKKLVSLKEEASEMGGYFILNGLERVVRLLILPKRNYPTSMVRNSFRERREGYT 743
            +LRG D ++LV  KEE+SEMGGYFILNGLERV+R +ILPKRNYP S VRNSFR+R+EGYT
Sbjct: 129  NLRGHDPQQLVYCKEESSEMGGYFILNGLERVIRPVILPKRNYPMSTVRNSFRDRKEGYT 188

Query: 744  DKAVVIRCVREDLSAVTLKLYYLSNGSARLGFWIQGREYLLPVGLVLKALADTSDHEIYV 923
            DKAVVIRC R+D S+VT+KLYYL NGSARLG WIQG+E+LLPVGL+LKAL DT D+E+Y 
Sbjct: 189  DKAVVIRCARDDQSSVTVKLYYLQNGSARLGVWIQGKEFLLPVGLILKALIDTPDNELYA 248

Query: 924  SLTCCYDEKYDGVKGSVGTQLVGERAKIILDEVHALSLFTREQCLEHIGKHFQPVMVGME 1103
            SLTCCY EK++  KG+VGTQLVGERA+II++EV  L LFTR QCLEHIG+HFQP+M G+E
Sbjct: 249  SLTCCYPEKFEKGKGAVGTQLVGERAQIIINEVVDLGLFTRGQCLEHIGEHFQPLMGGLE 308

Query: 1104 KEKPTAVADAVLEEYIFVHLYNNHDKFNLLLYMLQKLFSLVDQTSVPDNPDSLQNQEILL 1283
             E  + V DAVL++YIFVHL  N DKFNLL++MLQKLFSL+DQTSV DNPDSLQNQE+LL
Sbjct: 309  NEPYSVVGDAVLKDYIFVHLDKNEDKFNLLIFMLQKLFSLMDQTSVLDNPDSLQNQEVLL 368

Query: 1284 PGHLITIYLKEKLQEWLLKVKRQLQDE-TDNNKKFEFTNLADIKKVIDKNSPKQISSAIE 1460
            PGHLITIYLKEKL++WL + K+ LQDE    +    F ++  +KKV+DKN  +QIS A+E
Sbjct: 369  PGHLITIYLKEKLEDWLQRTKKLLQDEIKKESNNINFGSVDSLKKVLDKNPTRQISLAVE 428

Query: 1461 NMLKTGRLATQSGLDLQQRAGMTVQAERLNFLRFLSHFRAVHRGASFAGLRTTSVRKLLP 1640
            NMLKTGR+ TQ+GLDLQQRAG +VQAERLNFLRFLSHFRAVHRGASFAGLRTTSVRKLLP
Sbjct: 429  NMLKTGRINTQTGLDLQQRAGFSVQAERLNFLRFLSHFRAVHRGASFAGLRTTSVRKLLP 488

Query: 1641 ESWGFLCPVHTPDGEPCGLLNHMTSTCRITSFYDSKGNIRDFFKMRMXXXXXXXXXXXXX 1820
            ESWGFLCPVHTPDGEPCGLLNHMT TCRITS++D++GNIRDF KM+M             
Sbjct: 489  ESWGFLCPVHTPDGEPCGLLNHMTRTCRITSYFDAQGNIRDFTKMQMSILNVLIEVGMIP 548

Query: 1821 XXPKLVHAGPPKVLSVLLDGRIVGSIPIEMVEKAVSHLRRLKLSA--MIPEDLEVGYVPL 1994
              P LVHAG P  LSVLLDGR+VG I    VEK V+HLR+LK+SA  +IP+DLEVGYVPL
Sbjct: 549  SLPMLVHAGLPANLSVLLDGRVVGYISSTQVEKVVAHLRKLKVSAASVIPDDLEVGYVPL 608

Query: 1995 STCGTYPGLYLFTCPSRFIRPVKNISVPSGKENAVELIGPFEQVYMEISCPDGGDGGRKD 2174
            S  G YPGLYLFT PSRF+RPVKNIS+ + +   +ELIGPFEQV+MEI CPDG DGGRKD
Sbjct: 609  SMGGAYPGLYLFTSPSRFVRPVKNISISAVEGQNIELIGPFEQVFMEIRCPDGRDGGRKD 668

Query: 2175 VFPATHEEIHPTGFLSVVANLTPWSDHNQSPRNMYQCQMGKQTMGFPSQAIHHRADQKLY 2354
             FPATHEEIHPTG LSVVANLTPWS+HNQSPRNMYQCQM KQTMGF  QA+ +RADQKLY
Sbjct: 669  AFPATHEEIHPTGMLSVVANLTPWSEHNQSPRNMYQCQMAKQTMGFSLQALRNRADQKLY 728

Query: 2355 HLQTPQTPIVRTKAYENYNIDDFPLGTNAIVAVLAYSGYDMEDAMILNKSSVERGMFHGH 2534
            HL+TPQ+PIVRTK Y NY +D++P GTNAIVAVL+Y+GYDMEDAMIL+KSSV+RGMFHG 
Sbjct: 729  HLKTPQSPIVRTKTYTNYCVDEYPTGTNAIVAVLSYTGYDMEDAMILSKSSVDRGMFHGL 788

Query: 2535 IYQTETIDLVEQSSKSDRAGRTFRRSNLDKSSRHLIDSDGLPYIGQRIKPDEPYCSIYNE 2714
            +YQTE+IDL +Q  +S  + R+FRRS  DKS   LIDSDGLPY+GQ IKPDEPY S Y+E
Sbjct: 789  VYQTESIDLSDQKGRSG-SQRSFRRSAADKSYHSLIDSDGLPYVGQTIKPDEPYYSTYDE 847

Query: 2715 ITSSTCNTKLKGSEPVIVDYVAVDVKNKKNLQKANIRFRRTRNPVIGDKFSSRHGQKGVC 2894
            +  +   TK KGSEP IVDYVA+D   KK LQK NIRFR  RNP+IGDKFSSRHGQKGVC
Sbjct: 848  VKGAIRTTKRKGSEPAIVDYVAID--GKKQLQKVNIRFRHPRNPIIGDKFSSRHGQKGVC 905

Query: 2895 SQLWSDIDMPFSAVTGMRPDLIINPHAFPSRMTIGMLLESMAAKGGAIHGKFIDATPFGS 3074
            SQLW DIDMPFS VTGMRPDLIINPHAFPSRMTI MLLES+AAKGG++HGK++DATPF +
Sbjct: 906  SQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGKYVDATPFAN 965

Query: 3075 SPAHASEGQKSE-SSSLVDELGEMLRAEGFNYHGNEVLYSGVYGTELTCEIFIGPVYYQR 3251
            S     E    E S +LVDELGEML+ +GFNY+G EVLYSGVYGTELTCEIFIGPVYYQR
Sbjct: 966  SEKKVKEETNGEKSKTLVDELGEMLKVKGFNYNGAEVLYSGVYGTELTCEIFIGPVYYQR 1025

Query: 3252 LRHMVSDKFQVRSTGTVDQITRQPXXXXXXXXXXXFGEMERDSLLAHGAAYLLHDRLHTS 3431
            LRHMVSDKFQVRSTG VDQ+TRQP           FGEMERDSLLAHGAAYLLHDRLHT 
Sbjct: 1026 LRHMVSDKFQVRSTGMVDQVTRQPIKGRKRGGGIRFGEMERDSLLAHGAAYLLHDRLHTC 1085

Query: 3432 SDHHIADVCSLCGSILTTTLIQAQKRAIREIGGLPPARAPKKVMCISCRTSKGMETVAMP 3611
            SD+HIADVCSLCGSILTT+ +Q   R + EI G+PP RAPKKV C +C+TSKGMETVAMP
Sbjct: 1086 SDYHIADVCSLCGSILTTSSVQPPVR-VCEIPGMPPMRAPKKVTCHACKTSKGMETVAMP 1144

Query: 3612 YVFRYLATELAAMNIKMTLQLS 3677
            YVFRYLA ELAAMNIK+ LQLS
Sbjct: 1145 YVFRYLAAELAAMNIKLNLQLS 1166


>ref|XP_006415532.1| hypothetical protein EUTSA_v10006599mg [Eutrema salsugineum]
            gi|557093303|gb|ESQ33885.1| hypothetical protein
            EUTSA_v10006599mg [Eutrema salsugineum]
          Length = 1183

 Score = 1641 bits (4249), Expect = 0.0
 Identities = 800/1164 (68%), Positives = 954/1164 (81%), Gaps = 4/1164 (0%)
 Frame = +3

Query: 198  KEKDYTALADLFRHHIESFDYMVDQGLEIMLNNIKPVEIFNSSTNQKLKISFEKPEVYPP 377
            K +D+T L +L  HHIESFDYM ++GL +M + IKPV ++  ST +KL I  E P VY P
Sbjct: 13   KIEDFTELHNLVTHHIESFDYMTEKGLAVMFSRIKPVTVYEPSTERKLSIWLEDPRVYSP 72

Query: 378  QKERAMRTL-PDTLYPFECRQAKISYTGKFLVNICFQYGDEKVKVREKTNFGQFPIMLKS 554
            QKE    T   + L+PFECRQAKISYTG  +  ICF+Y +++  VR++  FG+FPIML S
Sbjct: 73   QKESLRSTSRKEALFPFECRQAKISYTGSLMAEICFRYDEDEYVVRDRYEFGEFPIMLMS 132

Query: 555  KLCHLRGADTKKLVSLKEEASEMGGYFILNGLERVVRLLILPKRNYPTSMVRNSFRERRE 734
            KLCHLRGAD ++L+  KE  SEMGGYFILNG+ERV R +I PKRN+PT MVRNSF  RRE
Sbjct: 133  KLCHLRGADCRQLLKYKESTSEMGGYFILNGIERVFRCVIAPKRNHPTGMVRNSFCGRRE 192

Query: 735  GYTDKAVVIRCVREDLSAVTLKLYYLSNGSARLGFWIQGREYLLPVGLVLKALADTSDHE 914
            GY+DKAV IRCVR+D S+VT+KLYYL NGSAR+GFWI  REYLLPVG+VLKAL +T+D E
Sbjct: 193  GYSDKAVAIRCVRDDQSSVTVKLYYLRNGSARVGFWIGAREYLLPVGVVLKALTETNDEE 252

Query: 915  IYVSLTCCYDEKYDGVKGSVGTQLVGERAKIILDEVHALSLFTREQCLEHIGKHFQPVMV 1094
            IY +LTCCY+E+Y    G++GTQL+ ER+KIILDEV  L LFTR+QC +++G+ FQP + 
Sbjct: 253  IYENLTCCYNERYGRGDGAIGTQLIRERSKIILDEVRDLGLFTRDQCRKYLGERFQPALD 312

Query: 1095 GMEKEKPTAVADAVLEEYIFVHLYNNHDKFNLLLYMLQKLFSLVDQTSVPDNPDSLQNQE 1274
            G+EKE    VA+AVL+ YIFVHL N+ DKFNLL++++QKLFSLVDQTS+PDNPDSLQNQE
Sbjct: 313  GLEKESYPTVAEAVLKNYIFVHLDNDDDKFNLLIFLIQKLFSLVDQTSLPDNPDSLQNQE 372

Query: 1275 ILLPGHLITIYLKEKLQEWLLKVKRQLQDETDNNKKFEFTNLADIKKVIDKNSPKQISSA 1454
            IL+PGHLITIYLKEKL+EWL K K  ++DE + +KKF F  +AD+KK+I+KN P+ I  +
Sbjct: 373  ILVPGHLITIYLKEKLEEWLRKCKSLIEDEFNRSKKFSFETIADVKKIINKNPPRSIGMS 432

Query: 1455 IENMLKTGRLATQSGLDLQQRAGMTVQAERLNFLRFLSHFRAVHRGASFAGLRTTSVRKL 1634
            IE +LK+GRL TQSGLDLQQRAG TVQAERLNFLRFLS FRAVHRGASFAGLRTT+VRKL
Sbjct: 433  IETLLKSGRLNTQSGLDLQQRAGYTVQAERLNFLRFLSFFRAVHRGASFAGLRTTTVRKL 492

Query: 1635 LPESWGFLCPVHTPDGEPCGLLNHMTSTCRITSFYDSKGNIRDFFKMRMXXXXXXXXXXX 1814
            LPESWGFLCPVHTPDGEPCGLLNHMT TCRITS +DS GNIRDF K+R            
Sbjct: 493  LPESWGFLCPVHTPDGEPCGLLNHMTRTCRITSQFDSNGNIRDFLKIRKSVVDVLVGVGM 552

Query: 1815 XXXXPKLVHAGPPKVLSVLLDGRIVGSIPIEMVEKAVSHLRRLKLSA--MIPEDLEVGYV 1988
                PKLV AGPPKV++VLLDG++VGS+   +V + V++LRRLK+ A  +IPEDLEVGYV
Sbjct: 553  VPSLPKLVRAGPPKVITVLLDGQVVGSLSSNLVTEVVAYLRRLKVEAPSVIPEDLEVGYV 612

Query: 1989 PLSTCGTYPGLYLFTCPSRFIRPVKNISVPSGKENAVELIGPFEQVYMEISCPDGGDGGR 2168
            P S  G+YPGLYL +CPSRFIRPVKN SVPS     +EL+GPFEQV+MEISCPDGG+GGR
Sbjct: 613  PTSMGGSYPGLYLASCPSRFIRPVKNNSVPSDN---IELVGPFEQVFMEISCPDGGNGGR 669

Query: 2169 KDVFPATHEEIHPTGFLSVVANLTPWSDHNQSPRNMYQCQMGKQTMGFPSQAIHHRADQK 2348
             +   ATHEEIHPTG +SVVANLTPWSDHNQSPRNMYQCQM KQTM + +QA+  RADQK
Sbjct: 670  NNSSTATHEEIHPTGIISVVANLTPWSDHNQSPRNMYQCQMAKQTMAYSTQALQFRADQK 729

Query: 2349 LYHLQTPQTPIVRTKAYENYNIDDFPLGTNAIVAVLAYSGYDMEDAMILNKSSVERGMFH 2528
            +YHLQTPQ+P+VRTK Y  Y+ID+ P GTNAIVAVLA++G+DMEDAMILNKSSVERGM H
Sbjct: 730  IYHLQTPQSPVVRTKTYTTYSIDENPTGTNAIVAVLAHTGFDMEDAMILNKSSVERGMCH 789

Query: 2529 GHIYQTETIDLVEQSSKSDRAGRTFRRSNLDKSSRHLIDSDGLPYIGQRIKPDEPYCSIY 2708
            G IYQTET+DL +Q S+SD   ++FRRS +DKS+   ID+DGLPYIGQ+I P+EPYCSIY
Sbjct: 790  GQIYQTETVDLSDQRSRSDNGNQSFRRSKVDKSAHSCIDADGLPYIGQKIYPNEPYCSIY 849

Query: 2709 NEITSSTCNTKLKGSEPVIVDYVAVDVKNKKNLQKANIRFRRTRNPVIGDKFSSRHGQKG 2888
            + +T+S    K KG++PVIVD+V+VD+K+KK+ QKANIRFR  RNP+IGDKFSSRHGQKG
Sbjct: 850  DGVTNSIKTMKRKGTDPVIVDFVSVDMKSKKHPQKANIRFRHARNPIIGDKFSSRHGQKG 909

Query: 2889 VCSQLWSDIDMPFSAVTGMRPDLIINPHAFPSRMTIGMLLESMAAKGGAIHGKFIDATPF 3068
            VCSQLW DIDMPF+ VTGMRPDLIINPHAFPSRMTI MLLES+AAKGG++ G+F+DATPF
Sbjct: 910  VCSQLWPDIDMPFNGVTGMRPDLIINPHAFPSRMTIAMLLESIAAKGGSLRGEFVDATPF 969

Query: 3069 GSSPAHASEGQKSESSSLVDELGEMLRAEGFNYHGNEVLYSGVYGTELTCEIFIGPVYYQ 3248
              +    +  ++S+SS LVD+LG ML+ +GFNY+G E LYSG  G EL CEIF+GPVYYQ
Sbjct: 970  RDAVKKPNGEEESKSSLLVDDLGSMLKEKGFNYYGTETLYSGYLGVELKCEIFMGPVYYQ 1029

Query: 3249 RLRHMVSDKFQVRSTGTVDQITRQPXXXXXXXXXXXFGEMERDSLLAHGAAYLLHDRLHT 3428
            RLRHMVSDKFQVRSTG VDQ+TRQP           FGEMERD++LAHGA+YLLHDRLHT
Sbjct: 1030 RLRHMVSDKFQVRSTGLVDQLTRQPIKGRKRGGGIRFGEMERDAMLAHGASYLLHDRLHT 1089

Query: 3429 SSDHHIADVCSLCGSILTTTLIQA-QKRAIREIGGLPPARAPKKVMCISCRTSKGMETVA 3605
            SSDHHIADVCSLCGS+LT++++   QK+ I++IG LPP R PKKV C SC+TSKGMETVA
Sbjct: 1090 SSDHHIADVCSLCGSLLTSSVVNVQQKKLIQDIGKLPPGRTPKKVTCDSCKTSKGMETVA 1149

Query: 3606 MPYVFRYLATELAAMNIKMTLQLS 3677
            MPYVFRYLA ELAAMNIK+TLQLS
Sbjct: 1150 MPYVFRYLAAELAAMNIKVTLQLS 1173


>ref|NP_564341.2| nuclear RNA polymerase A2 [Arabidopsis thaliana]
            gi|332193031|gb|AEE31152.1| nuclear RNA polymerase A2
            [Arabidopsis thaliana]
          Length = 1178

 Score = 1630 bits (4222), Expect = 0.0
 Identities = 803/1163 (69%), Positives = 953/1163 (81%), Gaps = 5/1163 (0%)
 Frame = +3

Query: 204  KDYTALADLFRHHIESFDYMVDQGLEIMLNNIKPVEIFNSSTNQKLKISFEKPEVYPPQK 383
            +D+  L +L  HHIESFDYM  +GL++M N IKPV +++ +T  +L I  E P V+ PQK
Sbjct: 14   EDFKELHNLVTHHIESFDYMTLKGLDVMFNRIKPVSVYDPNTENELSIWLENPLVFAPQK 73

Query: 384  ERAMRTL-PDTLYPFECRQAKISYTGKFLVNICFQYGDEKVKVREKTNFGQFPIMLKSKL 560
            E    T   + L PFECRQAKISYTG F+ ++CF+Y D  V VR+K +FGQFPIML SKL
Sbjct: 74   ESFKSTSRKEPLLPFECRQAKISYTGTFMADVCFKYNDGVV-VRDKFDFGQFPIMLMSKL 132

Query: 561  CHLRGADTKKLVSLKEEASEMGGYFILNGLERVVRLLILPKRNYPTSMVRNSFRERREGY 740
            C L+GAD +KL+  KE  SEMGGYFILNG+ERV R +I PKRN+PTSM+RNSFR+R+EGY
Sbjct: 133  CSLKGADCRKLLKCKESTSEMGGYFILNGIERVFRCVIAPKRNHPTSMIRNSFRDRKEGY 192

Query: 741  TDKAVVIRCVREDLSAVTLKLYYLSNGSARLGFWIQGREYLLPVGLVLKALADTSDHEIY 920
            + KAVV RCVR+D S+VT+KLYYL NGSAR+GFWI GREYLLPVGLVLKAL ++ D EIY
Sbjct: 193  SSKAVVTRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEEIY 252

Query: 921  VSLTCCYDEKYDGVKGSVGTQLVGERAKIILDEVHALSLFTREQCLEHIGKHFQPVMVGM 1100
             SL CCY E Y    G++GTQLV ERAKIILDEV  L LFTREQC +H+G+HFQPV+ G+
Sbjct: 253  ESLNCCYSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQPVLDGV 312

Query: 1101 EKEKPTAVADAVLEEYIFVHLYNNHDKFNLLLYMLQKLFSLVDQTSVPDNPDSLQNQEIL 1280
            +KE  + VA+AVL +Y+FVHL N+HDKFNLL++++QKL+SLVDQTS+PDNPDSLQNQEIL
Sbjct: 313  KKESLSIVAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLYSLVDQTSLPDNPDSLQNQEIL 372

Query: 1281 LPGHLITIYLKEKLQEWLLKVKRQLQDETDN-NKKFEFTNLADIKKVIDKNSPKQISSAI 1457
            +PGH+ITIYLKEKL+EWL K K  L+DE DN N KF F +LAD+KK+I+KN P+ I ++I
Sbjct: 373  VPGHVITIYLKEKLEEWLRKCKSLLKDELDNTNSKFSFESLADVKKLINKNPPRSIGTSI 432

Query: 1458 ENMLKTGRLATQSGLDLQQRAGMTVQAERLNFLRFLSHFRAVHRGASFAGLRTTSVRKLL 1637
            E +LKTG L TQSGLDLQQRAG TVQAERLNFLRFLS FRAVHRGASFAGLRTT+VRKLL
Sbjct: 433  ETLLKTGALKTQSGLDLQQRAGYTVQAERLNFLRFLSFFRAVHRGASFAGLRTTTVRKLL 492

Query: 1638 PESWGFLCPVHTPDGEPCGLLNHMTSTCRITSFYDSKGNIRDFFKMRMXXXXXXXXXXXX 1817
            PESWGFLCPVHTPDG PCGLLNHMT T RITS +DSKGNIRDF K+R             
Sbjct: 493  PESWGFLCPVHTPDGTPCGLLNHMTRTSRITSQFDSKGNIRDFLKIRKSVVDVLTGAGMV 552

Query: 1818 XXXPKLVHAGPPKVLSVLLDGRIVGSIPIEMVEKAVSHLRRLKLSA--MIPEDLEVGYVP 1991
               PKLV AGPPKV+ VLLDG++VG++   +V K VS++RRLK+ A  +IPEDLEVGYVP
Sbjct: 553  PSLPKLVRAGPPKVIHVLLDGQVVGTLSSNLVTKVVSYIRRLKVEAPSVIPEDLEVGYVP 612

Query: 1992 LSTCGTYPGLYLFTCPSRFIRPVKNISVPSGKENAVELIGPFEQVYMEISCPDGGDGGRK 2171
             S  G+YPGLYL +CP+RFIRPVKNIS+PS     +ELIGPFEQV+MEISCPDGG+GGR 
Sbjct: 613  TSMGGSYPGLYLASCPARFIRPVKNISIPSDN---IELIGPFEQVFMEISCPDGGNGGRN 669

Query: 2172 DVFPATHEEIHPTGFLSVVANLTPWSDHNQSPRNMYQCQMGKQTMGFPSQAIHHRADQKL 2351
            +   ATHEEIHPTG +SVVANLTPWSDHNQSPRNMYQCQM KQTM + +QA+  RADQK+
Sbjct: 670  NSSLATHEEIHPTGMISVVANLTPWSDHNQSPRNMYQCQMAKQTMAYSTQALQFRADQKI 729

Query: 2352 YHLQTPQTPIVRTKAYENYNIDDFPLGTNAIVAVLAYSGYDMEDAMILNKSSVERGMFHG 2531
            YHLQTPQ+P+VRTK Y  Y+ID+ P GTNAIVAVLA++G+DMEDAMILNKSSVERGM HG
Sbjct: 730  YHLQTPQSPVVRTKTYTTYSIDENPTGTNAIVAVLAHTGFDMEDAMILNKSSVERGMCHG 789

Query: 2532 HIYQTETIDLVEQSSKSDRAGRTFRRSNLDKSSRHLIDSDGLPYIGQRIKPDEPYCSIYN 2711
             IYQTE IDL +Q+S+ D   ++FRRS  +K+    ID+DGLP +GQ++ PDEPYCSIY+
Sbjct: 790  QIYQTENIDLSDQNSRFDSGSKSFRRST-NKAEHFRIDADGLPSVGQKLYPDEPYCSIYD 848

Query: 2712 EITSSTCNTKLKGSEPVIVDYVAVDVKNKKNLQKANIRFRRTRNPVIGDKFSSRHGQKGV 2891
            E+T+ T + K KG++PVIVD+V+VD+K+KK+ Q+ANIRFR  RNP+IGDKFSSRHGQKGV
Sbjct: 849  EVTNKTRHMKRKGTDPVIVDFVSVDMKSKKHPQRANIRFRHARNPIIGDKFSSRHGQKGV 908

Query: 2892 CSQLWSDIDMPFSAVTGMRPDLIINPHAFPSRMTIGMLLESMAAKGGAIHGKFIDATPFG 3071
            CSQLW DIDMPF+ VTGMRPDLIINPHAFPSRMTI MLLES+AAKGG++HGKF+DATPF 
Sbjct: 909  CSQLWPDIDMPFNGVTGMRPDLIINPHAFPSRMTIAMLLESIAAKGGSLHGKFVDATPFR 968

Query: 3072 SSPAHASEGQKSESSSLVDELGEMLRAEGFNYHGNEVLYSGVYGTELTCEIFIGPVYYQR 3251
             +    +  ++S+SS LVD+LG ML+ +GFN++G E LYSG  G EL CEIF+GPVYYQR
Sbjct: 969  DAVKKTNGEEESKSSLLVDDLGSMLKEKGFNHYGTETLYSGYLGVELKCEIFMGPVYYQR 1028

Query: 3252 LRHMVSDKFQVRSTGTVDQITRQPXXXXXXXXXXXFGEMERDSLLAHGAAYLLHDRLHTS 3431
            LRHMVSDKFQVRSTG VDQ+T QP           FGEMERDSLLAHGA+YLLHDRLHTS
Sbjct: 1029 LRHMVSDKFQVRSTGQVDQLTHQPIKGRKRGGGIRFGEMERDSLLAHGASYLLHDRLHTS 1088

Query: 3432 SDHHIADVCSLCGSILTTTLIQA-QKRAIREIGGLPPARAPKKVMCISCRTSKGMETVAM 3608
            SDHHIADVCSLCGS+LT++++   QK+ I+EIG LPP R PKKV C SC+TSKGMETVAM
Sbjct: 1089 SDHHIADVCSLCGSLLTSSVVNVQQKKLIQEIGKLPPGRTPKKVTCYSCKTSKGMETVAM 1148

Query: 3609 PYVFRYLATELAAMNIKMTLQLS 3677
            PYVFRYLA ELA+MNIKMTLQLS
Sbjct: 1149 PYVFRYLAAELASMNIKMTLQLS 1171


>ref|XP_006306612.1| hypothetical protein CARUB_v10008127mg [Capsella rubella]
            gi|482575323|gb|EOA39510.1| hypothetical protein
            CARUB_v10008127mg [Capsella rubella]
          Length = 1171

 Score = 1625 bits (4209), Expect = 0.0
 Identities = 803/1165 (68%), Positives = 947/1165 (81%), Gaps = 7/1165 (0%)
 Frame = +3

Query: 204  KDYTALADLFRHHIESFDYMVDQGLEIMLNNIKPVEIFNSSTNQKLKISFEKPEVYPPQK 383
            +D+  L +L  HHIESFDYM D+GLE+M N IKPV      TN         P V+ PQK
Sbjct: 14   EDFKELHNLVTHHIESFDYMTDKGLEVMFNRIKPV------TN---------PVVFAPQK 58

Query: 384  ERAMRTL-PDTLYPFECRQAKISYTGKFLVNICFQYGDEKVKVREKTNFGQFPIMLKSKL 560
            E    T   + L+PFECRQAKISYTG F+ ++CF+Y +E V VR+K +FGQFPIML SKL
Sbjct: 59   ESFSSTSRKEPLFPFECRQAKISYTGTFMADVCFKY-NEGVVVRDKFDFGQFPIMLMSKL 117

Query: 561  CHLRGADTKKLVSLKEEASEMGGYFILNGLERVVRLLILPKRNYPTSMVRNSFRERREGY 740
            C LRGAD +KL+  KE  SEMGGYF+LNG+ERV R +I PKRN+PTSM+RNSFR+RREGY
Sbjct: 118  CSLRGADCRKLLKCKESTSEMGGYFVLNGIERVFRCVIAPKRNHPTSMIRNSFRDRREGY 177

Query: 741  TDKAVVIRCVREDLSAVTLKLYYLSNGSARLGFWIQGREYLLPVGLVLKALADTSDHEIY 920
            +DKAV IRCVR+D S+VT+KLYYL NGSAR+GFWI GREYLLPVGLVLKAL  T+D E+Y
Sbjct: 178  SDKAVAIRCVRDDQSSVTVKLYYLRNGSARVGFWIGGREYLLPVGLVLKALTKTNDEEVY 237

Query: 921  VSLTCCYDEKYDGVKGSVGTQLVGERAKIILDEVHALSLFTREQCLEHIGKHFQPVMVGM 1100
             SL CCY+E Y    G++GTQLV ERAK+ILDEV  + LFTREQC +H+G+HFQPV+ G+
Sbjct: 238  KSLNCCYNENYGRGDGAIGTQLVRERAKVILDEVRDMGLFTREQCRKHLGEHFQPVLDGL 297

Query: 1101 EKEKPTAVADAVLEEYIFVHLYNNHDKFNLLLYMLQKLFSLVDQTSVPDNPDSLQNQEIL 1280
            EKE    VA+AVL +YIFVHL N+HDKFNLL++++QKL+SLVDQTS+PDNPDSLQNQEIL
Sbjct: 298  EKESYPTVAEAVLRDYIFVHLDNDHDKFNLLIFLIQKLYSLVDQTSLPDNPDSLQNQEIL 357

Query: 1281 LPGHLITIYLKEKLQEWLLKVKRQLQDE---TDNNKKFEFTNLADIKKVIDKNSPKQISS 1451
            +PGHLIT+YLKEKL+EWL K K  L+DE   T +  KF F +LAD+KK+ +KN P+ +  
Sbjct: 358  VPGHLITVYLKEKLEEWLRKCKSLLKDELHNTSSKSKFSFESLADVKKLFNKNPPRSVGM 417

Query: 1452 AIENMLKTGRLATQSGLDLQQRAGMTVQAERLNFLRFLSHFRAVHRGASFAGLRTTSVRK 1631
            +IE +LKTGR+ TQSGLDLQQRAG TVQAERLNFLRFLS FRAVHRGASFAGLRTT+VRK
Sbjct: 418  SIETLLKTGRMNTQSGLDLQQRAGYTVQAERLNFLRFLSFFRAVHRGASFAGLRTTTVRK 477

Query: 1632 LLPESWGFLCPVHTPDGEPCGLLNHMTSTCRITSFYDSKGNIRDFFKMRMXXXXXXXXXX 1811
            LLPESWGFLCPVHTPDGEPCGLLNHMT T RITS +DSKGNIRDF K+R           
Sbjct: 478  LLPESWGFLCPVHTPDGEPCGLLNHMTRTSRITSQFDSKGNIRDFLKIRKSVVEVLIGAG 537

Query: 1812 XXXXXPKLVHAGPPKVLSVLLDGRIVGSIPIEMVEKAVSHLRRLKLSA--MIPEDLEVGY 1985
                 PKLV A PP+V+ VLLDG++VG++   +V   VS+LRRLK+ A  +IPEDLEVGY
Sbjct: 538  MVSSLPKLVQAAPPEVIHVLLDGQVVGTLSSNLVTNVVSYLRRLKIEAPSVIPEDLEVGY 597

Query: 1986 VPLSTCGTYPGLYLFTCPSRFIRPVKNISVPSGKENAVELIGPFEQVYMEISCPDGGDGG 2165
            VP S  G+YPGLYL +CP+RFIRPVKNIS+PS    ++ELIGPFEQV+MEISCPDGG+GG
Sbjct: 598  VPTSMGGSYPGLYLASCPARFIRPVKNISIPS---ESIELIGPFEQVFMEISCPDGGNGG 654

Query: 2166 RKDVFPATHEEIHPTGFLSVVANLTPWSDHNQSPRNMYQCQMGKQTMGFPSQAIHHRADQ 2345
            R +  PATHEEIHPTG +SVVANLTPWSDHNQSPRNMYQCQM KQTM + +QA+  RADQ
Sbjct: 655  RNNSCPATHEEIHPTGMISVVANLTPWSDHNQSPRNMYQCQMAKQTMAYSTQALQFRADQ 714

Query: 2346 KLYHLQTPQTPIVRTKAYENYNIDDFPLGTNAIVAVLAYSGYDMEDAMILNKSSVERGMF 2525
            K+YHLQTPQ+P+VRTK Y  Y+ID+ P GTNAIVAVLA++G+DMEDAMILNKSSVERGM 
Sbjct: 715  KIYHLQTPQSPVVRTKTYTTYSIDENPTGTNAIVAVLAHTGFDMEDAMILNKSSVERGMC 774

Query: 2526 HGHIYQTETIDLVEQSSKSDRAGRTFRRSNLDKSSRHLIDSDGLPYIGQRIKPDEPYCSI 2705
            HG IYQTE IDL +Q+S+ D   ++FRRS  DKS    ID+DGLPY+GQ+I PDEPY SI
Sbjct: 775  HGQIYQTENIDLSDQNSRYDSGHKSFRRSTTDKSDHSTIDADGLPYVGQKIYPDEPYYSI 834

Query: 2706 YNEITSSTCNTKLKGSEPVIVDYVAVDVKNKKNLQKANIRFRRTRNPVIGDKFSSRHGQK 2885
            Y+E+T+     K KG++PVIVD+V+VD+K+KK+ QKANIRFR  RNP+IGDKFSSRHGQK
Sbjct: 835  YDEVTNRIRTIKRKGTDPVIVDFVSVDMKSKKHPQKANIRFRHARNPIIGDKFSSRHGQK 894

Query: 2886 GVCSQLWSDIDMPFSAVTGMRPDLIINPHAFPSRMTIGMLLESMAAKGGAIHGKFIDATP 3065
            GVCSQLW DIDMPF+ VTGMRPDLIINPHAFPSRMTI MLLES+AAKGG++HGKF+DATP
Sbjct: 895  GVCSQLWPDIDMPFNGVTGMRPDLIINPHAFPSRMTIAMLLESIAAKGGSLHGKFVDATP 954

Query: 3066 FGSSPAHASEGQKSESSSLVDELGEMLRAEGFNYHGNEVLYSGVYGTELTCEIFIGPVYY 3245
            F ++  +A+  +K +SS LVD+LG ML+ +GFNY+G E LYSG+ G EL CEIF+GPVYY
Sbjct: 955  FRNAVINANGEKKRKSSLLVDDLGSMLKEKGFNYYGTEKLYSGILGVELECEIFMGPVYY 1014

Query: 3246 QRLRHMVSDKFQVRSTGTVDQITRQPXXXXXXXXXXXFGEMERDSLLAHGAAYLLHDRLH 3425
            QRLRHMVSDKFQVRSTG VDQ+T QP           FGEMERDSLLAHGA+YLLHDRLH
Sbjct: 1015 QRLRHMVSDKFQVRSTGQVDQLTHQPIKGRKRGGGIRFGEMERDSLLAHGASYLLHDRLH 1074

Query: 3426 TSSDHHIADVCSLCGSILTTTLIQA-QKRAIREIGGLPPARAPKKVMCISCRTSKGMETV 3602
            TSSDHHIADVCSLCGS+LT+++    QK+ I+  G LPP R PKKV C SC+TSKGMETV
Sbjct: 1075 TSSDHHIADVCSLCGSLLTSSIANVQQKKLIQVTGKLPPGRTPKKVTCYSCKTSKGMETV 1134

Query: 3603 AMPYVFRYLATELAAMNIKMTLQLS 3677
            AMPYVFRYLA ELA+MNIKMTL+LS
Sbjct: 1135 AMPYVFRYLAAELASMNIKMTLKLS 1159


>ref|XP_002893589.1| hypothetical protein ARALYDRAFT_313639 [Arabidopsis lyrata subsp.
            lyrata] gi|297339431|gb|EFH69848.1| hypothetical protein
            ARALYDRAFT_313639 [Arabidopsis lyrata subsp. lyrata]
          Length = 1188

 Score = 1625 bits (4207), Expect = 0.0
 Identities = 806/1170 (68%), Positives = 949/1170 (81%), Gaps = 12/1170 (1%)
 Frame = +3

Query: 204  KDYTALADLFRHHIESFDYMVDQGLEIMLNNIKPVEIFNSSTNQKLK-------ISFEKP 362
            +D   L +L  HHIESFDYM  +GL++M N IKPV +++ +T  +L        +  E P
Sbjct: 14   EDLKELHNLVTHHIESFDYMTQKGLDVMFNRIKPVSVYDPNTENELSNILFFMILWLENP 73

Query: 363  EVYPPQKERAMRTL-PDTLYPFECRQAKISYTGKFLVNICFQYGDEKVKVREKTNFGQFP 539
             V+ PQKE    T   + L PFECRQAKISYTG F+ ++CF+Y D  V VR++ +FGQFP
Sbjct: 74   VVFAPQKESFRSTSRKEPLLPFECRQAKISYTGTFMADVCFKYNDGVV-VRDRFDFGQFP 132

Query: 540  IMLKSKLCHLRGADTKKLVSLKEEASEMGGYFILNGLERVVRLLILPKRNYPTSMVRNSF 719
            IML SKLC LRGAD +KL+  KE  SEMGGYFILNG+ERV R +I PKRN+PTSM+RNSF
Sbjct: 133  IMLMSKLCSLRGADCRKLLKCKESTSEMGGYFILNGIERVFRCVIAPKRNHPTSMIRNSF 192

Query: 720  RERREGYTDKAVVIRCVREDLSAVTLKLYYLSNGSARLGFWIQGREYLLPVGLVLKALAD 899
            R+R+EGYT+KAVV RCVR+D S+VT+KLYYL NGSAR+GFWI GREYLLPVGLVLKAL +
Sbjct: 193  RDRKEGYTEKAVVTRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTN 252

Query: 900  TSDHEIYVSLTCCYDEKYDGVKGSVGTQLVGERAKIILDEVHALSLFTREQCLEHIGKHF 1079
            T D EIY SL CCY E Y    G++GTQL+ ERAKIILDEV  L LFTREQC +H+G+HF
Sbjct: 253  TCDEEIYESLNCCYSEHYGRGDGAIGTQLIRERAKIILDEVRDLGLFTREQCRKHLGQHF 312

Query: 1080 QPVMVGMEKEKPTAVADAVLEEYIFVHLYNNHDKFNLLLYMLQKLFSLVDQTSVPDNPDS 1259
            QPV+ G+EKE    VA+AVL +Y+FVHL N+HDKFNLL++++QKL+SLVDQTS+PDNPDS
Sbjct: 313  QPVLDGLEKESHPMVAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLYSLVDQTSLPDNPDS 372

Query: 1260 LQNQEILLPGHLITIYLKEKLQEWLLKVKRQLQDETDN-NKKFEFTNLADIKKVIDKNSP 1436
            LQNQEIL+PGH+ITIYLKEKL++WL K K  L+DE  N + KF F +LAD+KK+I+KN P
Sbjct: 373  LQNQEILVPGHVITIYLKEKLEDWLRKCKSLLKDELLNTSSKFSFESLADVKKLINKNPP 432

Query: 1437 KQISSAIENMLKTGRLATQSGLDLQQRAGMTVQAERLNFLRFLSHFRAVHRGASFAGLRT 1616
            + I ++IE +LKTG L TQSGLDLQQRAG TVQAERLNFLRFLS FRAVHRGASFAGLRT
Sbjct: 433  RSIGTSIETLLKTGALKTQSGLDLQQRAGYTVQAERLNFLRFLSFFRAVHRGASFAGLRT 492

Query: 1617 TSVRKLLPESWGFLCPVHTPDGEPCGLLNHMTSTCRITSFYDSKGNIRDFFKMRMXXXXX 1796
            T+VRKLLPESWGFLCPVHTPDG PCGLLNHMT T RITS +DSKGNIRDF K+R      
Sbjct: 493  TTVRKLLPESWGFLCPVHTPDGTPCGLLNHMTCTSRITSQFDSKGNIRDFLKIRKSVVEV 552

Query: 1797 XXXXXXXXXXPKLVHAGPPKVLSVLLDGRIVGSIPIEMVEKAVSHLRRLKLSA--MIPED 1970
                      PKLV AGPPKV+ VLLDG++VG++   +V K VS+LRRLK+ A  +IPED
Sbjct: 553  LTGAGMVSSLPKLVRAGPPKVIHVLLDGQVVGTLSSNLVTKVVSYLRRLKVEAPSVIPED 612

Query: 1971 LEVGYVPLSTCGTYPGLYLFTCPSRFIRPVKNISVPSGKENAVELIGPFEQVYMEISCPD 2150
            LEVGYVP+S  G+YPGLYL +CP+RFIRPVKNIS+PS  EN +ELIGPFEQV+MEISCPD
Sbjct: 613  LEVGYVPISMGGSYPGLYLASCPARFIRPVKNISIPS--EN-IELIGPFEQVFMEISCPD 669

Query: 2151 GGDGGRKDVFPATHEEIHPTGFLSVVANLTPWSDHNQSPRNMYQCQMGKQTMGFPSQAIH 2330
            GG+GGR +  PATHEEIHPTG +SVVANLTPWSDHNQSPRNMYQCQM KQTM + +QA+ 
Sbjct: 670  GGNGGRNNSSPATHEEIHPTGMISVVANLTPWSDHNQSPRNMYQCQMAKQTMAYSTQALQ 729

Query: 2331 HRADQKLYHLQTPQTPIVRTKAYENYNIDDFPLGTNAIVAVLAYSGYDMEDAMILNKSSV 2510
             RADQK+YHLQTPQ+P+VRTK Y  Y+ID+ P GTNAIVAVLA++G+DMEDAMILNKSSV
Sbjct: 730  FRADQKIYHLQTPQSPVVRTKTYTTYSIDENPTGTNAIVAVLAHTGFDMEDAMILNKSSV 789

Query: 2511 ERGMFHGHIYQTETIDLVEQSSKSDRAGRTFRRSNLDKSSRHLIDSDGLPYIGQRIKPDE 2690
            ERGM HG IYQTE IDL +Q+S+ D   ++FRRS  DKS    ID+DGLPY+GQ+I PDE
Sbjct: 790  ERGMCHGQIYQTENIDLSDQNSRYDSGHKSFRRSTTDKSDHSRIDADGLPYVGQKIYPDE 849

Query: 2691 PYCSIYNEITSSTCNTKLKGSEPVIVDYVAVDVKNKKNLQKANIRFRRTRNPVIGDKFSS 2870
            PYC IY+E+T      K KG++PVIVD+V+VD+K+KK+ QKANIRFR  RNP+IGDKFSS
Sbjct: 850  PYCRIYDEVTGKQRLMKGKGTDPVIVDFVSVDMKSKKHPQKANIRFRHARNPIIGDKFSS 909

Query: 2871 RHGQKGVCSQLWSDIDMPFSAVTGMRPDLIINPHAFPSRMTIGMLLESMAAKGGAIHGKF 3050
            RHGQKGVCSQLW DI+MPF+ VTGMRPDLIINPHAFPSRMTI MLLES+AAKGG++HGKF
Sbjct: 910  RHGQKGVCSQLWPDIEMPFNGVTGMRPDLIINPHAFPSRMTIAMLLESIAAKGGSLHGKF 969

Query: 3051 IDATPFGSSPAHASEGQKSESSSLVDELGEMLRAEGFNYHGNEVLYSGVYGTELTCEIFI 3230
            +DATPF  +    +  ++S+SS LVD+LG ML+ +GFNY+G E LYSG  G EL CEIF+
Sbjct: 970  VDATPFRDAVKKTNGEKESKSSLLVDDLGSMLKEKGFNYYGTETLYSGSLGVELKCEIFM 1029

Query: 3231 GPVYYQRLRHMVSDKFQVRSTGTVDQITRQPXXXXXXXXXXXFGEMERDSLLAHGAAYLL 3410
            GPVYYQRLRHMVSDKFQVRSTG VDQ+T QP           FGEMERDSLLAHGA+YLL
Sbjct: 1030 GPVYYQRLRHMVSDKFQVRSTGQVDQLTHQPIKGRKRGGGIRFGEMERDSLLAHGASYLL 1089

Query: 3411 HDRLHTSSDHHIADVCSLCGSILTTTLIQA-QKRAIREIGGLPPARAPKKVMCISCRTSK 3587
            HDRLHTSSDHHIADVCSLCGS+LT++++   QK+ I+  G LPP R PKKV C SC TSK
Sbjct: 1090 HDRLHTSSDHHIADVCSLCGSLLTSSVVNVQQKKLIKVNGKLPPGRTPKKVTCHSCGTSK 1149

Query: 3588 GMETVAMPYVFRYLATELAAMNIKMTLQLS 3677
            GMETVAMPYVFRYLA ELA+MNIKMTLQLS
Sbjct: 1150 GMETVAMPYVFRYLAAELASMNIKMTLQLS 1179


>ref|XP_006428126.1| hypothetical protein CICLE_v10024768mg [Citrus clementina]
            gi|557530116|gb|ESR41366.1| hypothetical protein
            CICLE_v10024768mg [Citrus clementina]
          Length = 1082

 Score = 1615 bits (4182), Expect = 0.0
 Identities = 808/1076 (75%), Positives = 908/1076 (84%), Gaps = 6/1076 (0%)
 Frame = +3

Query: 465  LVNICFQYGDE-KVKVREKTNFGQFPIMLKSKLCHLRGADTKKLVSLKEEASEMGGYFIL 641
            + ++ FQY D     VRE+ NFGQFP+MLK++ CHL+GAD++KLVSLKEEA+EMGGYFIL
Sbjct: 1    MADVEFQYLDAGSPVVRERFNFGQFPVMLKTRRCHLQGADSQKLVSLKEEAAEMGGYFIL 60

Query: 642  NGLERVVRLLILPKRNYPTSMVRNSFRERREGYTDKAVVIRCVREDLSAVTLKLYYLSNG 821
            NGLERV R +ILPK+NYP SMVR+SFR+RREGYTDKAVVIRCVR+D S+VTLKLYYL NG
Sbjct: 61   NGLERVFRSVILPKQNYPMSMVRSSFRDRREGYTDKAVVIRCVRKDQSSVTLKLYYLLNG 120

Query: 822  SARLGFWIQGREYLLPVGLVLKALADTSDHEIYVSLTCCYDEKYDGVKGSVGTQLVGERA 1001
            S RLGFW+QG+EYLLPVG+VLKAL DT+D EI+  LTCCYDEKY   KG+VG+ LV ER 
Sbjct: 121  SVRLGFWLQGKEYLLPVGIVLKALVDTNDLEIFNHLTCCYDEKYKKEKGAVGSPLVSERV 180

Query: 1002 KIILDEVHALSLFTREQCLEHIGKHFQPVMVGMEKEKPTAVADAVLEEYIFVHLYNNHDK 1181
            KIIL EV  LSL TR QCL+HIG+HFQPV+ G++ E   AVA+ V+ +YIFVHL +N+DK
Sbjct: 181  KIILAEVQDLSLTTRLQCLQHIGEHFQPVIDGLQSESYYAVAETVIRDYIFVHLNDNNDK 240

Query: 1182 FNLLLYMLQKLFSLVDQTSVPDNPDSLQNQEILLPGHLITIYLKEKLQEWLLKVKRQLQD 1361
            FNLL++MLQKLFSLVD TSV DNPDSLQNQEILLPGHLITIYLKEKL++WL K K+ +QD
Sbjct: 241  FNLLIFMLQKLFSLVDHTSVSDNPDSLQNQEILLPGHLITIYLKEKLEDWLRKGKKLIQD 300

Query: 1362 ETDNN-KKFEFTNLADIKKVIDKNSPKQISSAIENMLKTGRLATQSGLDLQQRAGMTVQA 1538
            E +NN KKF+F NLA+IKKV++KN  KQI ++IE MLKTGRLATQ+GLDLQQRAG TVQA
Sbjct: 301  EIENNGKKFDFFNLANIKKVMEKNPSKQIGTSIETMLKTGRLATQTGLDLQQRAGYTVQA 360

Query: 1539 ERLNFLRFLSHFRAVHRGASFAGLRTTSVRKLLPESWGFLCPVHTPDGEPCGLLNHMTST 1718
            ERLNFLRF+S FRAVHRGASFAGLRTTSVRKLLPESWGFLCPVHTPDGEPCGLLNHMTST
Sbjct: 361  ERLNFLRFISFFRAVHRGASFAGLRTTSVRKLLPESWGFLCPVHTPDGEPCGLLNHMTST 420

Query: 1719 CRITSFYDSKGNIRDFFKMRMXXXXXXXXXXXXXXXPKLVHAGPPKVLSVLLDGRIVGSI 1898
            CR+ S+YDS+GNIRDF KMR                PKLV +GPP VLSVLLDGR+VG I
Sbjct: 421  CRVASYYDSRGNIRDFSKMRTSILRVLIGVGMIPSLPKLVKSGPPAVLSVLLDGRVVGVI 480

Query: 1899 PIEMVEKAVSHLRRLKLSA--MIPEDLEVGYVPLSTCGTYPGLYLFTCPSRFIRPVKNIS 2072
            P   +EK V+HLRRLK+SA  +IP+DLEVGYVPLS  G YPGLYLFT P +F+RPV+NIS
Sbjct: 481  PSSEIEKVVAHLRRLKVSAASVIPDDLEVGYVPLSLGGAYPGLYLFTSPPKFVRPVRNIS 540

Query: 2073 VPSGKENAVELIGPFEQVYMEISCPDGGDGGRKDVFPATHEEIHPTGFLSVVANLTPWSD 2252
            +PS +   +ELIGPFEQV+MEI CPDGGDGGR++ FPATHEEIHPTG LSVVANLTP+SD
Sbjct: 541  LPSEESQNIELIGPFEQVFMEIRCPDGGDGGRRNAFPATHEEIHPTGMLSVVANLTPYSD 600

Query: 2253 HNQSPRNMYQCQMGKQTMGFPSQAIHHRADQKLYHLQTPQTPIVRTKAYENYNIDDFPLG 2432
            HNQSPRNMYQCQM KQTMGF  QA+  RADQKLYHLQTPQTPIVRT  Y  Y+ID++P G
Sbjct: 601  HNQSPRNMYQCQMAKQTMGFSVQALKFRADQKLYHLQTPQTPIVRTNTYTKYSIDEYPTG 660

Query: 2433 TNAIVAVLAYSGYDMEDAMILNKSSVERGMFHGHIYQTETIDLVEQSSKSDRAGRTFRRS 2612
            TNAIVAVLAY+GYDMEDAMILNKSSV+RGM HG IYQTETIDL +  +K DR  + FRR+
Sbjct: 661  TNAIVAVLAYTGYDMEDAMILNKSSVDRGMCHGQIYQTETIDLSDDGNKVDRGQKLFRRN 720

Query: 2613 NLDKSSRHLIDSDGLPYIGQRIKPDEPYCSIYNEITSSTCNTKLKGSEPVIVDYVAVDVK 2792
               KS   +IDSDGLPY+GQ I P EPYCSIY++ T+S      KGSE V VDYVAVD+K
Sbjct: 721  KDAKSLHSVIDSDGLPYVGQMIHPGEPYCSIYDKTTNSWRTNSRKGSESVFVDYVAVDMK 780

Query: 2793 NKKNL-QKANIRFRRTRNPVIGDKFSSRHGQKGVCSQLWSDIDMPFSAVTGMRPDLIINP 2969
            N KNL QKANIRFR TRNP+IGDKFSSRHGQKGVCSQLW DIDMPFS VTGMRPDLIINP
Sbjct: 781  NSKNLPQKANIRFRHTRNPIIGDKFSSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINP 840

Query: 2970 HAFPSRMTIGMLLESMAAKGGAIHGKFIDATPFGSSPAHAS-EGQKSESSSLVDELGEML 3146
            HAFPSRMTI MLLES+AAKGG++HGKF+DATPF +S    + +    ES SLVDELGEML
Sbjct: 841  HAFPSRMTIAMLLESVAAKGGSLHGKFMDATPFANSVKKTNGDTGTDESKSLVDELGEML 900

Query: 3147 RAEGFNYHGNEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQITRQPX 3326
            R  GFNYHG EVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGT+DQITRQP 
Sbjct: 901  RTCGFNYHGVEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTMDQITRQPI 960

Query: 3327 XXXXXXXXXXFGEMERDSLLAHGAAYLLHDRLHTSSDHHIADVCSLCGSILTTTLIQAQK 3506
                      FGEMERDSLLAHGAAYLLHDRLHT SD+H+ADVCSLCGS+LT T I  QK
Sbjct: 961  KGRKRGGGIRFGEMERDSLLAHGAAYLLHDRLHTCSDYHVADVCSLCGSVLTATFIHPQK 1020

Query: 3507 RAIREIGGLPPARAPKKVMCISCRTSKGMETVAMPYVFRYLATELAAMNIKMTLQL 3674
            RAIREIGGLPPARAPKKV C +C+TSKGMETVAMPYVFRYLA ELAAMNIK+TLQL
Sbjct: 1021 RAIREIGGLPPARAPKKVTCHACQTSKGMETVAMPYVFRYLAAELAAMNIKITLQL 1076