BLASTX nr result

ID: Catharanthus22_contig00014860 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00014860
         (1145 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004237422.1| PREDICTED: DNA-directed RNA polymerase I sub...   201   5e-49
gb|EPS67751.1| hypothetical protein M569_07023 [Genlisea aurea]       171   7e-40
emb|CBI19898.3| unnamed protein product [Vitis vinifera]              137   1e-29
gb|EOY15075.1| TFIIB zinc-binding protein, putative [Theobroma c...   136   2e-29
ref|XP_004501608.1| PREDICTED: DNA-directed RNA polymerase I sub...   134   5e-29
ref|XP_004512027.1| PREDICTED: DNA-directed RNA polymerase I sub...   134   9e-29
dbj|BAJ91866.1| predicted protein [Hordeum vulgare subsp. vulgare]    132   2e-28
ref|XP_003603103.1| DNA-directed RNA polymerase I subunit RPA12 ...   130   8e-28
ref|NP_566786.1| TFIIB zinc-binding protein [Arabidopsis thalian...   128   5e-27
ref|XP_002875292.1| transcription factor S-II domain-containing ...   127   8e-27
gb|AAK18841.1|AC082645_11 putative RNA polymerase I subunit [Ory...   125   2e-26
ref|XP_002318989.1| transcription factor S-II domain-containing ...   124   5e-26
ref|XP_006416439.1| hypothetical protein EUTSA_v10009132mg [Eutr...   124   7e-26
ref|NP_001236766.1| uncharacterized protein LOC100527489 [Glycin...   123   1e-25
ref|XP_006390663.1| hypothetical protein EUTSA_v10019327mg [Eutr...   123   2e-25
ref|XP_004143007.1| PREDICTED: DNA-directed RNA polymerase I sub...   121   5e-25
gb|ESW34724.1| hypothetical protein PHAVU_001G175600g [Phaseolus...   121   6e-25
ref|XP_006650488.1| PREDICTED: DNA-directed RNA polymerase I sub...   120   8e-25
ref|XP_006292047.1| hypothetical protein CARUB_v10018251mg [Caps...   120   8e-25
ref|XP_002466584.1| hypothetical protein SORBIDRAFT_01g010360 [S...   120   8e-25

>ref|XP_004237422.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA12-like
           [Solanum lycopersicum] gi|565396690|ref|XP_006363942.1|
           PREDICTED: DNA-directed RNA polymerase I subunit
           RPA12-like isoform X1 [Solanum tuberosum]
           gi|565396692|ref|XP_006363943.1| PREDICTED: DNA-directed
           RNA polymerase I subunit RPA12-like isoform X2 [Solanum
           tuberosum]
          Length = 121

 Score =  201 bits (511), Expect = 5e-49
 Identities = 94/122 (77%), Positives = 107/122 (87%)
 Frame = +3

Query: 441 MAYYRQRDFLFCELCGTMLSFDSPKYARCPLCKFKRQMKDIAGKEICYTITAEDIRRELG 620
           MAY RQRDF+FCE+CGTML+FDSPKYARCPLCKFK+++K+IAG EI YT++AE I+RELG
Sbjct: 1   MAYCRQRDFMFCEMCGTMLAFDSPKYARCPLCKFKKRVKEIAGNEIQYTVSAEAIKRELG 60

Query: 621 ILPSFDDFEVEKESKQMDYNAKCKTCQHVGMSYVTMQTRSADEGQTIFYTCPKCGSKQTE 800
           I  SFDD E EKE KQMDYNAKCK CQH+GMSY+  Q RSADEGQTIFYTC  CG+KQTE
Sbjct: 61  I-SSFDDLEEEKELKQMDYNAKCKGCQHLGMSYIARQIRSADEGQTIFYTCLVCGNKQTE 119

Query: 801 NS 806
           NS
Sbjct: 120 NS 121


>gb|EPS67751.1| hypothetical protein M569_07023 [Genlisea aurea]
          Length = 124

 Score =  171 bits (432), Expect = 7e-40
 Identities = 79/122 (64%), Positives = 96/122 (78%), Gaps = 2/122 (1%)
 Frame = +3

Query: 447 YYRQRDFLFCELCGTMLSFDSPKYARCPLCKFKRQMKDIAGK--EICYTITAEDIRRELG 620
           Y   RDF+FC++CGTM+SF+S  YA+CP+CK ++  KDI+ K  EICY+IT E +RRELG
Sbjct: 4   YRTNRDFMFCDICGTMMSFNSLDYAQCPVCKIRKSFKDISKKNLEICYSITPESLRRELG 63

Query: 621 ILPSFDDFEVEKESKQMDYNAKCKTCQHVGMSYVTMQTRSADEGQTIFYTCPKCGSKQTE 800
           +  S DD E E+E KQMDYNAKCK CQH+GM+YV  Q RSADEGQTIFYTCP C  +QTE
Sbjct: 64  V-SSLDDVEEERELKQMDYNAKCKGCQHLGMAYVARQIRSADEGQTIFYTCPVCAHRQTE 122

Query: 801 NS 806
           NS
Sbjct: 123 NS 124


>emb|CBI19898.3| unnamed protein product [Vitis vinifera]
          Length = 126

 Score =  137 bits (344), Expect = 1e-29
 Identities = 69/126 (54%), Positives = 86/126 (68%), Gaps = 4/126 (3%)
 Frame = +3

Query: 441 MAYYRQRDFLFCELCGTMLSFDSPKYARCPLCKFKRQMKDIAGKEICYTITAEDIRRELG 620
           MAY RQRDF+FC LCGTML   S KYA CPLCK +R++KDI+G+EI YT++AEDIRREL 
Sbjct: 1   MAYSRQRDFMFCNLCGTMLCMSSTKYAECPLCKSRRKVKDISGREIRYTVSAEDIRRELN 60

Query: 621 ILP--SFDDFEVEK-ESKQMDYNAKCKTCQH-VGMSYVTMQTRSADEGQTIFYTCPKCGS 788
           I P    D    E+ E++      +C  C+    + Y T Q RSADEGQTIFY C KCG 
Sbjct: 61  IEPFVKLDGIITEESEAQNAKTKGRCDRCEEDTWLYYYTRQLRSADEGQTIFYECTKCGH 120

Query: 789 KQTENS 806
           K ++N+
Sbjct: 121 KWSQNT 126


>gb|EOY15075.1| TFIIB zinc-binding protein, putative [Theobroma cacao]
          Length = 119

 Score =  136 bits (342), Expect = 2e-29
 Identities = 69/121 (57%), Positives = 79/121 (65%)
 Frame = +3

Query: 441 MAYYRQRDFLFCELCGTMLSFDSPKYARCPLCKFKRQMKDIAGKEICYTITAEDIRRELG 620
           MAY + RDF+FC  CG+MLS  SPKYA CPLCKFK   K I G+EI YTITAEDIRR+LG
Sbjct: 1   MAYSQARDFMFCSFCGSMLSLVSPKYAECPLCKFKPSAKGILGREIGYTITAEDIRRDLG 60

Query: 621 ILPSFDDFEVEKESKQMDYNAKCKTCQHVGMSYVTMQTRSADEGQTIFYTCPKCGSKQTE 800
           I    +  +  KES  +     CK C H  + Y T Q RSADEGQT+F  CP C  K TE
Sbjct: 61  ISHVSEGMKT-KESAAL-IKQTCKKCGHPELEYTTRQMRSADEGQTVFLVCPNCKFKDTE 118

Query: 801 N 803
           N
Sbjct: 119 N 119


>ref|XP_004501608.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA12-like isoform
           X1 [Cicer arietinum] gi|502132990|ref|XP_004501609.1|
           PREDICTED: DNA-directed RNA polymerase I subunit
           RPA12-like isoform X2 [Cicer arietinum]
           gi|502132992|ref|XP_004501610.1| PREDICTED: DNA-directed
           RNA polymerase I subunit RPA12-like isoform X3 [Cicer
           arietinum]
          Length = 116

 Score =  134 bits (338), Expect = 5e-29
 Identities = 66/121 (54%), Positives = 83/121 (68%)
 Frame = +3

Query: 441 MAYYRQRDFLFCELCGTMLSFDSPKYARCPLCKFKRQMKDIAGKEICYTITAEDIRRELG 620
           M+Y R RDFLFC LCGTML+  S +YA+CPLCK ++ ++DI GKEI YTI+AEDIRRELG
Sbjct: 1   MSYSRGRDFLFCHLCGTMLAVPSTEYAQCPLCKTRKNIRDIKGKEISYTISAEDIRRELG 60

Query: 621 ILPSFDDFEVEKESKQMDYNAKCKTCQHVGMSYVTMQTRSADEGQTIFYTCPKCGSKQTE 800
           I     D   E++ +    N  C+ C H   ++ T Q RSADEGQT FYTC +CG +  E
Sbjct: 61  I-----DLIEEQKVQLSKVNKTCEKCGHGEATFYTRQMRSADEGQTTFYTCTRCGHQFQE 115

Query: 801 N 803
           N
Sbjct: 116 N 116


>ref|XP_004512027.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA12-like [Cicer
           arietinum]
          Length = 116

 Score =  134 bits (336), Expect = 9e-29
 Identities = 67/121 (55%), Positives = 82/121 (67%)
 Frame = +3

Query: 441 MAYYRQRDFLFCELCGTMLSFDSPKYARCPLCKFKRQMKDIAGKEICYTITAEDIRRELG 620
           M+Y R RDFLFC LCGTML+  S +YA+CPLCK K+ +K I GKEI YTI+AEDIRRELG
Sbjct: 1   MSYSRGRDFLFCNLCGTMLAVPSTEYAQCPLCKTKQNIKHIKGKEISYTISAEDIRRELG 60

Query: 621 ILPSFDDFEVEKESKQMDYNAKCKTCQHVGMSYVTMQTRSADEGQTIFYTCPKCGSKQTE 800
           I     D   E++ +    N  C+ C H   ++ T Q RSADEGQT FYTC +CG +  E
Sbjct: 61  I-----DLIEEQKVQLSKVNKTCEKCGHGEATFYTRQMRSADEGQTTFYTCTRCGHQFQE 115

Query: 801 N 803
           N
Sbjct: 116 N 116


>dbj|BAJ91866.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 125

 Score =  132 bits (333), Expect = 2e-28
 Identities = 67/129 (51%), Positives = 82/129 (63%), Gaps = 7/129 (5%)
 Frame = +3

Query: 441 MAYYRQRDFLFCELCGTMLSFDSPKYARCPLCKFKRQMKDIAGKEICYTITAEDIRRELG 620
           MA+++ RDFLFC +CGT+L F+S +YA CPLC FKR+ KDI GKE  Y +TAEDIRREL 
Sbjct: 1   MAFWQARDFLFCGVCGTLLDFNSHRYASCPLCGFKRKAKDIEGKETRYAVTAEDIRRELK 60

Query: 621 ILPSFDDFEVEKESKQMDY-------NAKCKTCQHVGMSYVTMQTRSADEGQTIFYTCPK 779
           I P    F V + +  +D           C  C H  + Y T Q RSADEGQTIFY CP+
Sbjct: 61  IKP----FVVLESAPNLDIVVQRSLTERACPKCNHHELEYYTKQLRSADEGQTIFYECPE 116

Query: 780 CGSKQTENS 806
           CG    EN+
Sbjct: 117 CGHAFNENT 125


>ref|XP_003603103.1| DNA-directed RNA polymerase I subunit RPA12 [Medicago truncatula]
           gi|357470681|ref|XP_003605625.1| DNA-directed RNA
           polymerase I subunit RPA12 [Medicago truncatula]
           gi|355492151|gb|AES73354.1| DNA-directed RNA polymerase
           I subunit RPA12 [Medicago truncatula]
           gi|355506680|gb|AES87822.1| DNA-directed RNA polymerase
           I subunit RPA12 [Medicago truncatula]
          Length = 115

 Score =  130 bits (328), Expect = 8e-28
 Identities = 67/119 (56%), Positives = 78/119 (65%)
 Frame = +3

Query: 447 YYRQRDFLFCELCGTMLSFDSPKYARCPLCKFKRQMKDIAGKEICYTITAEDIRRELGIL 626
           Y R RDFLFC LCGTML+  S  YA CPLCK K  +KDI GKEI YTI+AEDIRRELGI 
Sbjct: 2   YSRGRDFLFCHLCGTMLTVPSTDYALCPLCKTKCNIKDIKGKEISYTISAEDIRRELGI- 60

Query: 627 PSFDDFEVEKESKQMDYNAKCKTCQHVGMSYVTMQTRSADEGQTIFYTCPKCGSKQTEN 803
               D   E++ +    N  C+ C H   ++ T Q RSADEGQT FYTC +CG +  EN
Sbjct: 61  ----DLIEEQKVQLSKVNKTCEKCGHGEAAFYTRQMRSADEGQTTFYTCTRCGHQFQEN 115


>ref|NP_566786.1| TFIIB zinc-binding protein [Arabidopsis thaliana]
           gi|9279599|dbj|BAB01057.1| unnamed protein product
           [Arabidopsis thaliana] gi|21536551|gb|AAM60883.1|
           putative RNA polymerase I subunit [Arabidopsis thaliana]
           gi|88011125|gb|ABD38906.1| At3g25940 [Arabidopsis
           thaliana] gi|332643572|gb|AEE77093.1| TFIIB zinc-binding
           protein [Arabidopsis thaliana]
          Length = 119

 Score =  128 bits (321), Expect = 5e-27
 Identities = 63/116 (54%), Positives = 75/116 (64%)
 Frame = +3

Query: 453 RQRDFLFCELCGTMLSFDSPKYARCPLCKFKRQMKDIAGKEICYTITAEDIRRELGILPS 632
           R+ +FLFC LCGTML   S KYA CP CK  R  KDI  KEI YT++AEDIRRELGI  S
Sbjct: 5   RESEFLFCNLCGTMLVLKSTKYAECPHCKTTRNAKDIIDKEIAYTVSAEDIRRELGI--S 62

Query: 633 FDDFEVEKESKQMDYNAKCKTCQHVGMSYVTMQTRSADEGQTIFYTCPKCGSKQTE 800
               + + E++       C+ CQH  + Y T QTRSADEGQT +YTCP C  + TE
Sbjct: 63  LFGEKTQAEAELPKIKKACEKCQHPELVYTTRQTRSADEGQTTYYTCPNCAHRFTE 118


>ref|XP_002875292.1| transcription factor S-II domain-containing protein [Arabidopsis
           lyrata subsp. lyrata] gi|297321130|gb|EFH51551.1|
           transcription factor S-II domain-containing protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 119

 Score =  127 bits (319), Expect = 8e-27
 Identities = 62/116 (53%), Positives = 75/116 (64%)
 Frame = +3

Query: 453 RQRDFLFCELCGTMLSFDSPKYARCPLCKFKRQMKDIAGKEICYTITAEDIRRELGILPS 632
           R+  FLFC  CGTML   S KYA CPLCK  R  K+I  K+I YT+TAEDIRRELGI  S
Sbjct: 5   RESGFLFCNWCGTMLVLKSTKYAECPLCKTTRNAKEIINKDIAYTVTAEDIRRELGI--S 62

Query: 633 FDDFEVEKESKQMDYNAKCKTCQHVGMSYVTMQTRSADEGQTIFYTCPKCGSKQTE 800
               + ++E++       C+ CQH  + Y T QTRSADEGQT +YTCP C  + TE
Sbjct: 63  LFGEKTQEEAELPKIKKACEKCQHPELVYTTRQTRSADEGQTTYYTCPNCAHRFTE 118


>gb|AAK18841.1|AC082645_11 putative RNA polymerase I subunit [Oryza sativa Japonica Group]
           gi|108710721|gb|ABF98516.1| Transcription factor S-II
           family protein, expressed [Oryza sativa Japonica Group]
          Length = 126

 Score =  125 bits (315), Expect = 2e-26
 Identities = 63/125 (50%), Positives = 81/125 (64%), Gaps = 4/125 (3%)
 Frame = +3

Query: 441 MAYYRQRDFLFCELCGTMLSFDSPKYARCPLCKFKRQMKDIAGKEICYTITAEDIRRELG 620
           MA+++ RDFLFC +CGT+L FDS + A CPLC FKR+ KDI GKE  YT+TAEDIRREL 
Sbjct: 1   MAFWQARDFLFCGVCGTLLKFDSVRSASCPLCGFKRKAKDIEGKETRYTVTAEDIRRELK 60

Query: 621 ILPSFDDFEVEKES----KQMDYNAKCKTCQHVGMSYVTMQTRSADEGQTIFYTCPKCGS 788
           + P        KE     ++   N +C+ C++  + Y T Q RSADEGQT+FY C  C  
Sbjct: 61  LDPYVILETTLKEEDVIVERATVNKECEKCKNPELQYYTKQLRSADEGQTVFYKCANCRH 120

Query: 789 KQTEN 803
           +  EN
Sbjct: 121 EFNEN 125


>ref|XP_002318989.1| transcription factor S-II domain-containing family protein [Populus
           trichocarpa] gi|222857365|gb|EEE94912.1| transcription
           factor S-II domain-containing family protein [Populus
           trichocarpa]
          Length = 117

 Score =  124 bits (312), Expect = 5e-26
 Identities = 58/121 (47%), Positives = 79/121 (65%)
 Frame = +3

Query: 441 MAYYRQRDFLFCELCGTMLSFDSPKYARCPLCKFKRQMKDIAGKEICYTITAEDIRRELG 620
           MA+ R  DF+FC+LCGTM+   S ++  CPLCKFK+  KD++ +EI Y +++ED+RR+LG
Sbjct: 1   MAHARGGDFMFCDLCGTMMFLYSKEHVECPLCKFKKSAKDLSEREISYQVSSEDMRRDLG 60

Query: 621 ILPSFDDFEVEKESKQMDYNAKCKTCQHVGMSYVTMQTRSADEGQTIFYTCPKCGSKQTE 800
           I      FE + E K M+ N KC+ C H  + + T Q RSADEGQT F+ C  C    TE
Sbjct: 61  I----SHFEGKMEVKDMEINKKCEKCGHTKLKFSTRQMRSADEGQTTFFHCANCSYTFTE 116

Query: 801 N 803
           N
Sbjct: 117 N 117


>ref|XP_006416439.1| hypothetical protein EUTSA_v10009132mg [Eutrema salsugineum]
           gi|312281609|dbj|BAJ33670.1| unnamed protein product
           [Thellungiella halophila] gi|557094210|gb|ESQ34792.1|
           hypothetical protein EUTSA_v10009132mg [Eutrema
           salsugineum]
          Length = 119

 Score =  124 bits (311), Expect = 7e-26
 Identities = 60/116 (51%), Positives = 76/116 (65%)
 Frame = +3

Query: 453 RQRDFLFCELCGTMLSFDSPKYARCPLCKFKRQMKDIAGKEICYTITAEDIRRELGILPS 632
           R+  FLFC LCGTML   S   A CPLC+  R  K+I GK+I YT++AEDIRRELGI  S
Sbjct: 5   RESGFLFCNLCGTMLILKSATSAECPLCQTTRNAKEIIGKDIAYTVSAEDIRRELGI--S 62

Query: 633 FDDFEVEKESKQMDYNAKCKTCQHVGMSYVTMQTRSADEGQTIFYTCPKCGSKQTE 800
               + +++++       C+ CQH  + Y T QTRSADEGQT +YTCP CG + TE
Sbjct: 63  LFGEKTQEDAELPKIKKACEKCQHPELVYTTRQTRSADEGQTTYYTCPNCGHRFTE 118


>ref|NP_001236766.1| uncharacterized protein LOC100527489 [Glycine max]
           gi|255632466|gb|ACU16583.1| unknown [Glycine max]
          Length = 116

 Score =  123 bits (309), Expect = 1e-25
 Identities = 62/117 (52%), Positives = 78/117 (66%), Gaps = 3/117 (2%)
 Frame = +3

Query: 462 DFLFCELCGTMLSFDSPKYARCPLCKFKRQMKDIAGKEICYTITAEDIRRELGILPSFDD 641
           DFLFC LCGTML+  S +YA+CPLCK +R ++DI  KEI +TI+ EDIRRELG+      
Sbjct: 7   DFLFCNLCGTMLTVPSTEYAQCPLCKTRRDIQDICDKEISFTISDEDIRRELGM------ 60

Query: 642 FEVEKESKQMDY---NAKCKTCQHVGMSYVTMQTRSADEGQTIFYTCPKCGSKQTEN 803
            E+ +E   M+Y   + KC+ C H   +Y T Q RSADEGQT FYTC  CG +  EN
Sbjct: 61  -EIIEEHAVMEYSKVSKKCEKCGHGEATYYTRQMRSADEGQTTFYTCTGCGHQSQEN 116


>ref|XP_006390663.1| hypothetical protein EUTSA_v10019327mg [Eutrema salsugineum]
           gi|557087097|gb|ESQ27949.1| hypothetical protein
           EUTSA_v10019327mg [Eutrema salsugineum]
          Length = 119

 Score =  123 bits (308), Expect = 2e-25
 Identities = 60/116 (51%), Positives = 75/116 (64%)
 Frame = +3

Query: 453 RQRDFLFCELCGTMLSFDSPKYARCPLCKFKRQMKDIAGKEICYTITAEDIRRELGILPS 632
           R+  FLFC LCGTML   S   A CPLC+  R  K+I GKEI YT++AEDIRRELGI  S
Sbjct: 5   RESGFLFCNLCGTMLILKSATSAECPLCQTTRNAKEIIGKEIAYTVSAEDIRRELGI--S 62

Query: 633 FDDFEVEKESKQMDYNAKCKTCQHVGMSYVTMQTRSADEGQTIFYTCPKCGSKQTE 800
               + +++++       C+ CQH  + Y T QTRSADEGQT +YTCP C  + TE
Sbjct: 63  LFGEKTQEDAELPKIKKACEKCQHPELVYTTRQTRSADEGQTTYYTCPNCSHRFTE 118


>ref|XP_004143007.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA12-like isoform
           1 [Cucumis sativus] gi|449450516|ref|XP_004143008.1|
           PREDICTED: DNA-directed RNA polymerase I subunit
           RPA12-like isoform 2 [Cucumis sativus]
           gi|449450518|ref|XP_004143009.1| PREDICTED: DNA-directed
           RNA polymerase I subunit RPA12-like isoform 3 [Cucumis
           sativus] gi|449500372|ref|XP_004161079.1| PREDICTED:
           DNA-directed RNA polymerase I subunit RPA12-like isoform
           1 [Cucumis sativus] gi|449500375|ref|XP_004161080.1|
           PREDICTED: DNA-directed RNA polymerase I subunit
           RPA12-like isoform 2 [Cucumis sativus]
           gi|449500379|ref|XP_004161081.1| PREDICTED: DNA-directed
           RNA polymerase I subunit RPA12-like isoform 3 [Cucumis
           sativus]
          Length = 116

 Score =  121 bits (304), Expect = 5e-25
 Identities = 63/121 (52%), Positives = 79/121 (65%)
 Frame = +3

Query: 441 MAYYRQRDFLFCELCGTMLSFDSPKYARCPLCKFKRQMKDIAGKEICYTITAEDIRRELG 620
           MAY R  DFLFC LCGTMLSF S KY  CP CK +R  K+I G+EI YT+TAE+IR++LG
Sbjct: 1   MAYSRGHDFLFCNLCGTMLSFCSTKYVECPSCKSRRSAKEIVGREISYTVTAEEIRKQLG 60

Query: 621 ILPSFDDFEVEKESKQMDYNAKCKTCQHVGMSYVTMQTRSADEGQTIFYTCPKCGSKQTE 800
           I  S  D E  + +K+     +C+ C +    + + Q RSADEGQT FYTC KC  +  E
Sbjct: 61  I--SLIDEEKMQLAKE---RRRCEKCGNDEAWFESRQMRSADEGQTTFYTCTKCHHQTRE 115

Query: 801 N 803
           N
Sbjct: 116 N 116


>gb|ESW34724.1| hypothetical protein PHAVU_001G175600g [Phaseolus vulgaris]
          Length = 115

 Score =  121 bits (303), Expect = 6e-25
 Identities = 61/114 (53%), Positives = 75/114 (65%)
 Frame = +3

Query: 462 DFLFCELCGTMLSFDSPKYARCPLCKFKRQMKDIAGKEICYTITAEDIRRELGILPSFDD 641
           DFLFC LCGTML+  + +YA CPLCK  R ++DI  KEI YTI AEDIRRELGI     +
Sbjct: 7   DFLFCHLCGTMLTVPNSEYAVCPLCKTLRDIQDIRDKEIGYTIYAEDIRRELGI-----E 61

Query: 642 FEVEKESKQMDYNAKCKTCQHVGMSYVTMQTRSADEGQTIFYTCPKCGSKQTEN 803
              E++ +    N KC+ C H   ++ T Q RSADEGQT FYTC +CG +  EN
Sbjct: 62  IIEEQKVQLSKVNKKCEKCGHDEANFYTRQMRSADEGQTTFYTCTRCGHQSQEN 115


>ref|XP_006650488.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA12-like [Oryza
           brachyantha]
          Length = 125

 Score =  120 bits (302), Expect = 8e-25
 Identities = 60/124 (48%), Positives = 77/124 (62%), Gaps = 3/124 (2%)
 Frame = +3

Query: 441 MAYYRQRDFLFCELCGTMLSFDSPKYARCPLCKFKRQMKDIAGKEICYTITAEDIRRELG 620
           MA+++ RDFLFC +CGT+L+FDS  YA CPLC FKR+ K+I GKE  Y +T EDIRR+L 
Sbjct: 1   MAFWQARDFLFCGVCGTLLTFDSLHYASCPLCGFKRKTKEIQGKETRYAVTGEDIRRDLK 60

Query: 621 ILPSF---DDFEVEKESKQMDYNAKCKTCQHVGMSYVTMQTRSADEGQTIFYTCPKCGSK 791
           + P        + E   K+   N  C  C +  + Y T Q RSADEGQT+F+ C  C  K
Sbjct: 61  LDPFVVLESTLKDETAVKRATINRLCPECGYHELEYYTKQLRSADEGQTVFFECRDCRHK 120

Query: 792 QTEN 803
             EN
Sbjct: 121 FNEN 124


>ref|XP_006292047.1| hypothetical protein CARUB_v10018251mg [Capsella rubella]
           gi|482560754|gb|EOA24945.1| hypothetical protein
           CARUB_v10018251mg [Capsella rubella]
          Length = 119

 Score =  120 bits (302), Expect = 8e-25
 Identities = 63/117 (53%), Positives = 78/117 (66%), Gaps = 1/117 (0%)
 Frame = +3

Query: 453 RQRDFLFCELCGTMLSFDSPKYARCPLCKFKRQMKDIAGKEICYTITAEDIRRELGILPS 632
           ++  FLFC LCGTML   S K+A CPLCK  R+ KDI  K+I Y ++AEDIRRELGI   
Sbjct: 5   QESGFLFCGLCGTMLILKSRKHAECPLCKTTRKAKDIIDKDIAYKVSAEDIRRELGI-SL 63

Query: 633 FDDFEVEKESKQMDYNAK-CKTCQHVGMSYVTMQTRSADEGQTIFYTCPKCGSKQTE 800
           F   E ++E +Q+    K C+ CQH  + Y T QTRSADEGQT +YTCP C  + TE
Sbjct: 64  FG--EKQQEDEQLPKIKKACEKCQHPELVYTTRQTRSADEGQTTYYTCPNCAHRFTE 118


>ref|XP_002466584.1| hypothetical protein SORBIDRAFT_01g010360 [Sorghum bicolor]
           gi|241920438|gb|EER93582.1| hypothetical protein
           SORBIDRAFT_01g010360 [Sorghum bicolor]
          Length = 115

 Score =  120 bits (302), Expect = 8e-25
 Identities = 60/114 (52%), Positives = 77/114 (67%)
 Frame = +3

Query: 441 MAYYRQRDFLFCELCGTMLSFDSPKYARCPLCKFKRQMKDIAGKEICYTITAEDIRRELG 620
           MA+++ RDFLFC +CGT+L+FDS   A CPLC FKR  K++ GK+I YT+TAEDIRR L 
Sbjct: 1   MAFWQARDFLFCGVCGTLLTFDSVHSASCPLCGFKRGAKEMEGKQIQYTMTAEDIRRGLK 60

Query: 621 ILPSFDDFEVEKESKQMDYNAKCKTCQHVGMSYVTMQTRSADEGQTIFYTCPKC 782
            L   ++  V++       N  CK C H    Y ++Q RSADEG+TIFYTC KC
Sbjct: 61  TLT--EEIVVQRPKT----NKTCKFCDHPEAEYYSLQMRSADEGETIFYTCTKC 108


Top