BLASTX nr result

ID: Catharanthus22_contig00014777 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00014777
         (242 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263663.2| PREDICTED: sister chromatid cohesion 1 prote...    82   7e-14
ref|XP_006366497.1| PREDICTED: sister chromatid cohesion 1 prote...    82   1e-13
ref|XP_004229595.1| PREDICTED: sister chromatid cohesion 1 prote...    81   1e-13
emb|CBI24843.3| unnamed protein product [Vitis vinifera]               64   3e-08
gb|EOX96749.1| Cohesin subunit rad21, putative isoform 2 [Theobr...    59   9e-07
gb|EOX96748.1| Cohesin subunit rad21, putative isoform 1 [Theobr...    59   9e-07

>ref|XP_002263663.2| PREDICTED: sister chromatid cohesion 1 protein 3-like [Vitis
           vinifera]
          Length = 761

 Score = 82.0 bits (201), Expect = 7e-14
 Identities = 45/78 (57%), Positives = 53/78 (67%), Gaps = 4/78 (5%)
 Frame = +1

Query: 16  GTNNETESRQTTDFTPSAGHSGLGKETPATYSGERLGVENTGLSDIPELLNSA----GDL 183
           GT+  T S  T DF+ SAG  G   ETPAT+  ++LGVENTGLSDIPEL+NSA     +L
Sbjct: 598 GTDFGTRSLPTPDFSMSAGTFGSDLETPATFMEDQLGVENTGLSDIPELVNSAEVSLSEL 657

Query: 184 NFLEQDDNTPAASQGTPE 237
           NFLE DD TP  S GT +
Sbjct: 658 NFLEADDMTPTGSPGTQD 675


>ref|XP_006366497.1| PREDICTED: sister chromatid cohesion 1 protein 3-like [Solanum
           tuberosum]
          Length = 675

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 44/79 (55%), Positives = 52/79 (65%)
 Frame = +1

Query: 4   SVQGGTNNETESRQTTDFTPSAGHSGLGKETPATYSGERLGVENTGLSDIPELLNSAGDL 183
           S Q G   ++  + T D   S GH G   ETP+T+ GE LGVE+T LSDIPE  NSAGDL
Sbjct: 505 SSQIGRTMDSGVQPTPDPAASTGHVGSDMETPSTWFGEGLGVEDTVLSDIPEFDNSAGDL 564

Query: 184 NFLEQDDNTPAASQGTPES 240
           +FLEQDD TP   +GTP S
Sbjct: 565 SFLEQDDETPIGLRGTPLS 583


>ref|XP_004229595.1| PREDICTED: sister chromatid cohesion 1 protein 3-like [Solanum
           lycopersicum]
          Length = 668

 Score = 81.3 bits (199), Expect = 1e-13
 Identities = 44/79 (55%), Positives = 53/79 (67%)
 Frame = +1

Query: 4   SVQGGTNNETESRQTTDFTPSAGHSGLGKETPATYSGERLGVENTGLSDIPELLNSAGDL 183
           S Q G   ++  + T D   S GH G   ETP+T+ GE LGVE+T LSDIPE  NSAGDL
Sbjct: 496 SSQIGRTIDSGVQPTPDPAASTGHVGSHMETPSTWFGEGLGVEDTVLSDIPEFDNSAGDL 555

Query: 184 NFLEQDDNTPAASQGTPES 240
           +FLEQDD+TP   +GTP S
Sbjct: 556 SFLEQDDDTPIGLRGTPLS 574


>emb|CBI24843.3| unnamed protein product [Vitis vinifera]
          Length = 709

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 33/53 (62%), Positives = 39/53 (73%)
 Frame = +1

Query: 16  GTNNETESRQTTDFTPSAGHSGLGKETPATYSGERLGVENTGLSDIPELLNSA 174
           GT+  T S  T DF+ SAG  G   ETPAT+  ++LGVENTGLSDIPEL+NSA
Sbjct: 574 GTDFGTRSLPTPDFSMSAGTFGSDLETPATFMEDQLGVENTGLSDIPELVNSA 626


>gb|EOX96749.1| Cohesin subunit rad21, putative isoform 2 [Theobroma cacao]
          Length = 652

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 32/77 (41%), Positives = 43/77 (55%)
 Frame = +1

Query: 1   HSVQGGTNNETESRQTTDFTPSAGHSGLGKETPATYSGERLGVENTGLSDIPELLNSAGD 180
           +S+Q     +  +  T D    +G  G G +TP T   E+  +ENTG S IPE  +S  D
Sbjct: 513 NSLQSELAPKAGATSTPDIATFSGTHGSGIDTPMTLLEEQSHLENTGFSAIPEFGSSEAD 572

Query: 181 LNFLEQDDNTPAASQGT 231
           L FLE+D NTP  SQG+
Sbjct: 573 LYFLEEDGNTPTESQGS 589


>gb|EOX96748.1| Cohesin subunit rad21, putative isoform 1 [Theobroma cacao]
          Length = 677

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 32/77 (41%), Positives = 43/77 (55%)
 Frame = +1

Query: 1   HSVQGGTNNETESRQTTDFTPSAGHSGLGKETPATYSGERLGVENTGLSDIPELLNSAGD 180
           +S+Q     +  +  T D    +G  G G +TP T   E+  +ENTG S IPE  +S  D
Sbjct: 513 NSLQSELAPKAGATSTPDIATFSGTHGSGIDTPMTLLEEQSHLENTGFSAIPEFGSSEAD 572

Query: 181 LNFLEQDDNTPAASQGT 231
           L FLE+D NTP  SQG+
Sbjct: 573 LYFLEEDGNTPTESQGS 589


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