BLASTX nr result
ID: Catharanthus22_contig00014751
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00014751
(864 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004298107.1| PREDICTED: uncharacterized protein LOC101309... 66 2e-08
ref|XP_004299240.1| PREDICTED: general transcription factor IIE ... 63 5e-08
ref|XP_006341650.1| PREDICTED: general transcription factor IIE ... 64 9e-08
ref|XP_006341649.1| PREDICTED: general transcription factor IIE ... 64 9e-08
ref|XP_002331723.1| predicted protein [Populus trichocarpa] gi|5... 64 9e-08
ref|XP_002322033.1| predicted protein [Populus trichocarpa] 64 9e-08
gb|EOX93215.1| General transcription factor IIE subunit 1 isofor... 62 1e-07
gb|EOX93214.1| General transcription factor IIE subunit 1 isofor... 62 1e-07
gb|EOX93216.1| General transcription factor IIE subunit 1 isofor... 62 1e-07
ref|XP_002534134.1| transcription initiation factor iie, alpha s... 62 1e-07
ref|XP_003633196.1| PREDICTED: general transcription factor IIE ... 61 2e-07
ref|XP_004508577.1| PREDICTED: general transcription factor IIE ... 61 2e-07
ref|XP_004235735.1| PREDICTED: general transcription factor IIE ... 61 5e-07
gb|EXC28058.1| General transcription factor IIE subunit 1 [Morus... 60 5e-07
gb|ESW27143.1| hypothetical protein PHAVU_003G177500g [Phaseolus... 59 7e-07
ref|XP_003524511.1| PREDICTED: general transcription factor IIE ... 59 7e-07
ref|XP_004293076.1| PREDICTED: putative ribonuclease H protein A... 60 1e-06
gb|ESW10335.1| hypothetical protein PHAVU_009G200700g [Phaseolus... 57 1e-06
ref|XP_003527134.1| PREDICTED: general transcription factor IIE ... 57 1e-06
ref|XP_006357717.1| PREDICTED: uncharacterized protein LOC102595... 58 4e-06
>ref|XP_004298107.1| PREDICTED: uncharacterized protein LOC101309926 [Fragaria vesca
subsp. vesca]
Length = 317
Score = 65.9 bits (159), Expect = 2e-08
Identities = 33/47 (70%), Positives = 37/47 (78%), Gaps = 1/47 (2%)
Frame = -3
Query: 226 QIYDVVRYRLHRMRKKLKDELDNKNTV-FYTCPTPTCGKRLILFAAF 89
QIYDVVRYRLH MRKKLKDEL++KNTV Y C P CGKR +L +F
Sbjct: 259 QIYDVVRYRLHHMRKKLKDELEDKNTVQEYVC--PNCGKRFLLIGSF 303
>ref|XP_004299240.1| PREDICTED: general transcription factor IIE subunit 1-like
[Fragaria vesca subsp. vesca]
Length = 451
Score = 62.8 bits (151), Expect(2) = 5e-08
Identities = 32/40 (80%), Positives = 34/40 (85%), Gaps = 1/40 (2%)
Frame = -3
Query: 226 QIYDVVRYRLHRMRKKLKDELDNKNTV-FYTCPTPTCGKR 110
QIYDVVRYRLHRMRKKLKDEL++KNTV Y C P CGKR
Sbjct: 132 QIYDVVRYRLHRMRKKLKDELEDKNTVQEYVC--PNCGKR 169
Score = 21.6 bits (44), Expect(2) = 5e-08
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -1
Query: 45 VCVCFNYRYNALDAL 1
VC RYNALDAL
Sbjct: 162 VCPNCGKRYNALDAL 176
>ref|XP_006341650.1| PREDICTED: general transcription factor IIE subunit 1-like isoform
X2 [Solanum tuberosum]
Length = 472
Score = 63.5 bits (153), Expect = 9e-08
Identities = 32/40 (80%), Positives = 34/40 (85%), Gaps = 1/40 (2%)
Frame = -3
Query: 226 QIYDVVRYRLHRMRKKLKDELDNKNTV-FYTCPTPTCGKR 110
QIYDVVRYRLHRM+KKL+DELDNKNTV Y C P CGKR
Sbjct: 132 QIYDVVRYRLHRMKKKLRDELDNKNTVQEYIC--PNCGKR 169
>ref|XP_006341649.1| PREDICTED: general transcription factor IIE subunit 1-like isoform
X1 [Solanum tuberosum]
Length = 474
Score = 63.5 bits (153), Expect = 9e-08
Identities = 32/40 (80%), Positives = 34/40 (85%), Gaps = 1/40 (2%)
Frame = -3
Query: 226 QIYDVVRYRLHRMRKKLKDELDNKNTV-FYTCPTPTCGKR 110
QIYDVVRYRLHRM+KKL+DELDNKNTV Y C P CGKR
Sbjct: 132 QIYDVVRYRLHRMKKKLRDELDNKNTVQEYIC--PNCGKR 169
>ref|XP_002331723.1| predicted protein [Populus trichocarpa]
gi|566205569|ref|XP_006374149.1| transcription
initiation factor IIE alpha subunit family protein
[Populus trichocarpa] gi|550321822|gb|ERP51946.1|
transcription initiation factor IIE alpha subunit family
protein [Populus trichocarpa]
Length = 472
Score = 63.5 bits (153), Expect = 9e-08
Identities = 32/40 (80%), Positives = 35/40 (87%), Gaps = 1/40 (2%)
Frame = -3
Query: 226 QIYDVVRYRLHRMRKKLKDELDNKNTV-FYTCPTPTCGKR 110
QIYDVVRYRLHRMRKKLKDEL++KNTV YTC P CG+R
Sbjct: 131 QIYDVVRYRLHRMRKKLKDELEDKNTVQEYTC--PNCGRR 168
>ref|XP_002322033.1| predicted protein [Populus trichocarpa]
Length = 198
Score = 63.5 bits (153), Expect = 9e-08
Identities = 32/40 (80%), Positives = 35/40 (87%), Gaps = 1/40 (2%)
Frame = -3
Query: 226 QIYDVVRYRLHRMRKKLKDELDNKNTV-FYTCPTPTCGKR 110
QIYDVVRYRLHRMRKKLKDEL++KNTV YTC P CG+R
Sbjct: 124 QIYDVVRYRLHRMRKKLKDELEDKNTVQEYTC--PNCGRR 161
>gb|EOX93215.1| General transcription factor IIE subunit 1 isoform 2 [Theobroma
cacao]
Length = 480
Score = 61.6 bits (148), Expect(2) = 1e-07
Identities = 31/40 (77%), Positives = 34/40 (85%), Gaps = 1/40 (2%)
Frame = -3
Query: 226 QIYDVVRYRLHRMRKKLKDELDNKNTV-FYTCPTPTCGKR 110
QIYDVVRYRLHRM+KKLKDEL++KNTV Y C P CGKR
Sbjct: 132 QIYDVVRYRLHRMKKKLKDELEDKNTVQEYVC--PNCGKR 169
Score = 21.6 bits (44), Expect(2) = 1e-07
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -1
Query: 45 VCVCFNYRYNALDAL 1
VC RYNALDAL
Sbjct: 162 VCPNCGKRYNALDAL 176
>gb|EOX93214.1| General transcription factor IIE subunit 1 isoform 1 [Theobroma
cacao]
Length = 475
Score = 61.6 bits (148), Expect(2) = 1e-07
Identities = 31/40 (77%), Positives = 34/40 (85%), Gaps = 1/40 (2%)
Frame = -3
Query: 226 QIYDVVRYRLHRMRKKLKDELDNKNTV-FYTCPTPTCGKR 110
QIYDVVRYRLHRM+KKLKDEL++KNTV Y C P CGKR
Sbjct: 132 QIYDVVRYRLHRMKKKLKDELEDKNTVQEYVC--PNCGKR 169
Score = 21.6 bits (44), Expect(2) = 1e-07
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -1
Query: 45 VCVCFNYRYNALDAL 1
VC RYNALDAL
Sbjct: 162 VCPNCGKRYNALDAL 176
>gb|EOX93216.1| General transcription factor IIE subunit 1 isoform 3 [Theobroma
cacao]
Length = 473
Score = 61.6 bits (148), Expect(2) = 1e-07
Identities = 31/40 (77%), Positives = 34/40 (85%), Gaps = 1/40 (2%)
Frame = -3
Query: 226 QIYDVVRYRLHRMRKKLKDELDNKNTV-FYTCPTPTCGKR 110
QIYDVVRYRLHRM+KKLKDEL++KNTV Y C P CGKR
Sbjct: 132 QIYDVVRYRLHRMKKKLKDELEDKNTVQEYVC--PNCGKR 169
Score = 21.6 bits (44), Expect(2) = 1e-07
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -1
Query: 45 VCVCFNYRYNALDAL 1
VC RYNALDAL
Sbjct: 162 VCPNCGKRYNALDAL 176
>ref|XP_002534134.1| transcription initiation factor iie, alpha subunit, putative
[Ricinus communis] gi|223525806|gb|EEF28251.1|
transcription initiation factor iie, alpha subunit,
putative [Ricinus communis]
Length = 300
Score = 61.6 bits (148), Expect(2) = 1e-07
Identities = 30/40 (75%), Positives = 34/40 (85%), Gaps = 1/40 (2%)
Frame = -3
Query: 226 QIYDVVRYRLHRMRKKLKDELDNKNTV-FYTCPTPTCGKR 110
QIYDVVRYRLHR+RKKLKDEL+NKNT+ Y C P CG+R
Sbjct: 155 QIYDVVRYRLHRLRKKLKDELENKNTIQEYIC--PNCGRR 192
Score = 21.2 bits (43), Expect(2) = 1e-07
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -1
Query: 45 VCVCFNYRYNALDAL 1
+C RYNALDAL
Sbjct: 185 ICPNCGRRYNALDAL 199
>ref|XP_003633196.1| PREDICTED: general transcription factor IIE subunit 1-like [Vitis
vinifera] gi|297735317|emb|CBI17757.3| unnamed protein
product [Vitis vinifera]
Length = 475
Score = 61.2 bits (147), Expect(2) = 2e-07
Identities = 31/40 (77%), Positives = 34/40 (85%), Gaps = 1/40 (2%)
Frame = -3
Query: 226 QIYDVVRYRLHRMRKKLKDELDNKNTV-FYTCPTPTCGKR 110
QIYDVVRYRLHRM+KKLKDEL++KNTV Y C P CGKR
Sbjct: 131 QIYDVVRYRLHRMKKKLKDELEDKNTVQEYIC--PNCGKR 168
Score = 21.2 bits (43), Expect(2) = 2e-07
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -1
Query: 45 VCVCFNYRYNALDAL 1
+C RYNALDAL
Sbjct: 161 ICPNCGKRYNALDAL 175
>ref|XP_004508577.1| PREDICTED: general transcription factor IIE subunit 1-like [Cicer
arietinum]
Length = 474
Score = 60.8 bits (146), Expect(2) = 2e-07
Identities = 31/40 (77%), Positives = 33/40 (82%), Gaps = 1/40 (2%)
Frame = -3
Query: 226 QIYDVVRYRLHRMRKKLKDELDNKNTV-FYTCPTPTCGKR 110
QIYDVVRYRLHRM+ KLKDEL+NKNTV Y C P CGKR
Sbjct: 130 QIYDVVRYRLHRMKHKLKDELENKNTVQEYIC--PNCGKR 167
Score = 21.2 bits (43), Expect(2) = 2e-07
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -1
Query: 45 VCVCFNYRYNALDAL 1
+C RYNALDAL
Sbjct: 160 ICPNCGKRYNALDAL 174
>ref|XP_004235735.1| PREDICTED: general transcription factor IIE subunit 1-like [Solanum
lycopersicum]
Length = 472
Score = 61.2 bits (147), Expect = 5e-07
Identities = 31/40 (77%), Positives = 33/40 (82%), Gaps = 1/40 (2%)
Frame = -3
Query: 226 QIYDVVRYRLHRMRKKLKDELDNKNTV-FYTCPTPTCGKR 110
QIYDVVRYRLHRM+KKL+DELDNKNTV Y C P C KR
Sbjct: 132 QIYDVVRYRLHRMKKKLRDELDNKNTVQEYIC--PNCAKR 169
>gb|EXC28058.1| General transcription factor IIE subunit 1 [Morus notabilis]
Length = 406
Score = 59.7 bits (143), Expect(2) = 5e-07
Identities = 29/40 (72%), Positives = 34/40 (85%), Gaps = 1/40 (2%)
Frame = -3
Query: 226 QIYDVVRYRLHRMRKKLKDELDNKNTV-FYTCPTPTCGKR 110
QIYDVVRYRLHR++KKLKDEL++KNT+ Y C P CGKR
Sbjct: 61 QIYDVVRYRLHRLKKKLKDELEDKNTIQEYIC--PNCGKR 98
Score = 21.2 bits (43), Expect(2) = 5e-07
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -1
Query: 45 VCVCFNYRYNALDAL 1
+C RYNALDAL
Sbjct: 91 ICPNCGKRYNALDAL 105
>gb|ESW27143.1| hypothetical protein PHAVU_003G177500g [Phaseolus vulgaris]
Length = 473
Score = 59.3 bits (142), Expect(2) = 7e-07
Identities = 29/40 (72%), Positives = 33/40 (82%), Gaps = 1/40 (2%)
Frame = -3
Query: 226 QIYDVVRYRLHRMRKKLKDELDNKNTV-FYTCPTPTCGKR 110
QIYDV+RYRLHRM+ KLKDEL+NKNT+ Y C P CGKR
Sbjct: 131 QIYDVIRYRLHRMKHKLKDELENKNTLQEYIC--PNCGKR 168
Score = 21.2 bits (43), Expect(2) = 7e-07
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -1
Query: 45 VCVCFNYRYNALDAL 1
+C RYNALDAL
Sbjct: 161 ICPNCGKRYNALDAL 175
>ref|XP_003524511.1| PREDICTED: general transcription factor IIE subunit 1-like [Glycine
max]
Length = 471
Score = 59.3 bits (142), Expect(2) = 7e-07
Identities = 29/40 (72%), Positives = 33/40 (82%), Gaps = 1/40 (2%)
Frame = -3
Query: 226 QIYDVVRYRLHRMRKKLKDELDNKNTV-FYTCPTPTCGKR 110
QIYDV+RYRLHRM+ KLKDEL+NKNT+ Y C P CGKR
Sbjct: 131 QIYDVIRYRLHRMKHKLKDELENKNTLQEYIC--PNCGKR 168
Score = 21.2 bits (43), Expect(2) = 7e-07
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -1
Query: 45 VCVCFNYRYNALDAL 1
+C RYNALDAL
Sbjct: 161 ICPNCGKRYNALDAL 175
>ref|XP_004293076.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 487
Score = 60.1 bits (144), Expect = 1e-06
Identities = 38/107 (35%), Positives = 54/107 (50%), Gaps = 2/107 (1%)
Frame = -1
Query: 861 VLRRCDGTLIYAFSNSV-IIILTLIQKPFLLISVAMAIDMGYYSCSLQSDSIAMVSMING 685
V R DG +I A + + + + L S+ A D GY + ++ DS ++ ING
Sbjct: 347 VFRNSDGNVILAAAKGLGSTTIPTAEATALRDSLVKARDRGYMNVQVEGDSKLVIDAING 406
Query: 684 SFSIPWRLDEILKHIYHL-LSFHQFSIAHAYQEANTMPDALANLGCQ 547
S PWRL +I++ I + SF H Y+EAN M DA AN G Q
Sbjct: 407 KLSPPWRLQKIVQDIRTIATSFSSVCFNHVYREANFMADAFANEGHQ 453
>gb|ESW10335.1| hypothetical protein PHAVU_009G200700g [Phaseolus vulgaris]
gi|561011429|gb|ESW10336.1| hypothetical protein
PHAVU_009G200700g [Phaseolus vulgaris]
Length = 471
Score = 57.4 bits (137), Expect(2) = 1e-06
Identities = 29/40 (72%), Positives = 32/40 (80%), Gaps = 1/40 (2%)
Frame = -3
Query: 226 QIYDVVRYRLHRMRKKLKDELDNKNTV-FYTCPTPTCGKR 110
QIYDVVRYR+HRM+K LKDELDNKNT+ Y C CGKR
Sbjct: 131 QIYDVVRYRIHRMKKLLKDELDNKNTIEEYIC--TKCGKR 168
Score = 21.9 bits (45), Expect(2) = 1e-06
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -1
Query: 45 VCVCFNYRYNALDAL 1
+C RYNALDAL
Sbjct: 161 ICTKCGKRYNALDAL 175
>ref|XP_003527134.1| PREDICTED: general transcription factor IIE subunit 1-like [Glycine
max]
Length = 469
Score = 57.4 bits (137), Expect(2) = 1e-06
Identities = 29/40 (72%), Positives = 32/40 (80%), Gaps = 1/40 (2%)
Frame = -3
Query: 226 QIYDVVRYRLHRMRKKLKDELDNKNTV-FYTCPTPTCGKR 110
QIYDVVRYR+HRM+K LKDELDNKNT+ Y C CGKR
Sbjct: 131 QIYDVVRYRIHRMKKLLKDELDNKNTIEEYIC--TKCGKR 168
Score = 21.9 bits (45), Expect(2) = 1e-06
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -1
Query: 45 VCVCFNYRYNALDAL 1
+C RYNALDAL
Sbjct: 161 ICTKCGKRYNALDAL 175
>ref|XP_006357717.1| PREDICTED: uncharacterized protein LOC102595469 [Solanum tuberosum]
Length = 1079
Score = 58.2 bits (139), Expect = 4e-06
Identities = 39/132 (29%), Positives = 62/132 (46%), Gaps = 1/132 (0%)
Frame = -1
Query: 864 GVLRRCDGTLIYAFS-NSVIIILTLIQKPFLLISVAMAIDMGYYSCSLQSDSIAMVSMIN 688
GV+R G+L++A+S N + LL V I G+ +SDS +V +N
Sbjct: 927 GVIRDHSGSLVFAYSLNLGQGTSNWAEAKALLYGVQWCISSGHEFILAESDSRLLVDCVN 986
Query: 687 GSFSIPWRLDEILKHIYHLLSFHQFSIAHAYQEANTMPDALANLGCQFRTCTNYTTLAHL 508
S PWR+ E + + + + F + H Y+EAN DALA+ Y L
Sbjct: 987 NSSVTPWRILEEVNELKNHMETTGFILNHCYREANQAADALASTSFSSPGNILYEYFEEL 1046
Query: 507 PSHIHGLIILDQ 472
P+ + GL+ +D+
Sbjct: 1047 PAKVKGLMTMDR 1058